Guide to the Human Genome
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Name: LUC7L2 Sequence: fasta or formatted (392aa) NCBI GI: 116812577
Description:

LUC7-like 2

Referenced in:

Capping and Splicing
Xenobiotic Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         26           2
 C cysteine            2.0          8           2
 D aspartate           7.1         28           2
 E glutamate          12.0         47           2
 F phenylalanine       2.3          9           3
 G glycine             3.3         13           2
 H histidine           3.8         15           1
 I isoleucine          2.0          8           1
 K lysine              7.9         31           2
 L leucine             6.9         27           2
 M methionine          2.3          9           1
 N asparagine          2.0          8           1
 P proline             1.0          4           1
 Q glutamine           4.1         16           3
 R arginine           18.1         71           2
 S serine             11.7         46           3
 T threonine           1.8          7           2
 V valine              3.8         15           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.0          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   LUC7-like 2 
LUC7L                 0.691   LUC7-like isoform b 
LUC7L                 0.668   LUC7-like isoform a 
CROP                  0.290   cisplatin resistance-associated overexpressed protei...
CROP                  0.290   cisplatin resistance-associated overexpressed protei...
RBM25                 0.099   RNA binding motif protein 25 
LOC100286959          0.097   PREDICTED: hypothetical protein XP_002343921 
RSRC2                 0.095   arginine/serine-rich coiled-coil 2 isoform b 
ZC3H13                0.094   zinc finger CCCH-type containing 13 
RSRC2                 0.090   arginine/serine-rich coiled-coil 2 isoform a 
LOC100133599          0.089   PREDICTED: hypothetical protein 
SFRS12                0.089   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.089   splicing factor, arginine/serine-rich 12 isoform b [...
LOC100133599          0.086   PREDICTED: hypothetical protein 
PRPF38B               0.086   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
LOC100131202          0.083   PREDICTED: hypothetical protein 
SFRS4                 0.081   splicing factor, arginine/serine-rich 4 
LOC100131202          0.081   PREDICTED: hypothetical protein 
LOC100134067          0.081   PREDICTED: hypothetical protein 
LOC100288837          0.081   PREDICTED: hypothetical protein XP_002343931, parti...
SFRS11                0.081   splicing factor, arginine/serine-rich 11 
DDX46                 0.079   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
SON                   0.077   SON DNA-binding protein isoform F 
SON                   0.077   SON DNA-binding protein isoform B 
PPIG                  0.077   peptidylprolyl isomerase G 
LOC100170229          0.075   hypothetical protein LOC100170229 
RSRC1                 0.072   arginine/serine-rich coiled-coil 1 
SFRS6                 0.071   arginine/serine-rich splicing factor 6 
ZRANB2                0.071   zinc finger protein 265 isoform 1 
ZRANB2                0.070   zinc finger protein 265 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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