Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 24497620
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24497620 signal recognition particle 68kDa [Homo sapiens]
(627 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24497620 signal recognition particle 68kDa [Homo sapiens] 1241 0.0
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 58 2e-08
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 58 2e-08
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 58 2e-08
gi|89145413 short stature homeobox 2 isoform a [Homo sapiens] 56 9e-08
gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens] 54 3e-07
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 54 4e-07
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 54 4e-07
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 54 4e-07
gi|195972866 keratin 10 [Homo sapiens] 54 4e-07
gi|84570137 homeobox B3 [Homo sapiens] 53 7e-07
gi|21322252 androgen receptor isoform 1 [Homo sapiens] 52 1e-06
gi|8051631 RNA binding protein (autoantigenic, hnRNP-associated ... 52 1e-06
gi|21396480 RNA binding protein (autoantigenic, hnRNP-associated... 52 1e-06
gi|12056465 fibrillarin [Homo sapiens] 51 3e-06
gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens] 51 3e-06
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 51 3e-06
gi|197209826 chromosome 2 open reading frame 21 isoform 1 [Homo ... 50 5e-06
gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens] 50 6e-06
gi|5032007 purine-rich element binding protein A [Homo sapiens] 50 8e-06
gi|23510368 homeobox D11 [Homo sapiens] 49 1e-05
gi|125987596 sodium bicarbonate transporter 4 isoform a [Homo sa... 49 1e-05
gi|19743827 sodium bicarbonate transporter 4 isoform c [Homo sap... 49 1e-05
gi|33620755 YEATS domain containing 2 [Homo sapiens] 49 1e-05
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 49 1e-05
gi|6912752 zinc finger protein 281 [Homo sapiens] 49 1e-05
gi|109452587 family with sequence similarity 98, member B isofor... 49 2e-05
gi|238859557 regulatory factor X1 [Homo sapiens] 48 2e-05
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 48 2e-05
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 48 2e-05
>gi|24497620 signal recognition particle 68kDa [Homo sapiens]
Length = 627
Score = 1241 bits (3212), Expect = 0.0
Identities = 627/627 (100%), Positives = 627/627 (100%)
Query: 1 MAAEKQVPGGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGDSLSL 60
MAAEKQVPGGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGDSLSL
Sbjct: 1 MAAEKQVPGGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGDSLSL 60
Query: 61 EILQIIKESQQQHGLRHGDFQRYRGYCSRRQRRLRKTLNFKMGNRHKFTGKKVTEELLTD 120
EILQIIKESQQQHGLRHGDFQRYRGYCSRRQRRLRKTLNFKMGNRHKFTGKKVTEELLTD
Sbjct: 61 EILQIIKESQQQHGLRHGDFQRYRGYCSRRQRRLRKTLNFKMGNRHKFTGKKVTEELLTD 120
Query: 121 NRYLLLVLMDAERAWSYAMQLKQEANTEPRKRFHLLSRLRKAVKHAEELERLCESNRVDA 180
NRYLLLVLMDAERAWSYAMQLKQEANTEPRKRFHLLSRLRKAVKHAEELERLCESNRVDA
Sbjct: 121 NRYLLLVLMDAERAWSYAMQLKQEANTEPRKRFHLLSRLRKAVKHAEELERLCESNRVDA 180
Query: 181 KTKLEAQAYTAYLSGMLRFEHQEWKAAIEAFNKCKTIYEKLASAFTEEQAVLYNQRVEEI 240
KTKLEAQAYTAYLSGMLRFEHQEWKAAIEAFNKCKTIYEKLASAFTEEQAVLYNQRVEEI
Sbjct: 181 KTKLEAQAYTAYLSGMLRFEHQEWKAAIEAFNKCKTIYEKLASAFTEEQAVLYNQRVEEI 240
Query: 241 SPNIRYCAYNIGDQSAINELMQMRLRSGGTEGLLAEKLEALITQTRAKQAATMSEVEWRG 300
SPNIRYCAYNIGDQSAINELMQMRLRSGGTEGLLAEKLEALITQTRAKQAATMSEVEWRG
Sbjct: 241 SPNIRYCAYNIGDQSAINELMQMRLRSGGTEGLLAEKLEALITQTRAKQAATMSEVEWRG 300
Query: 301 RTVPVKIDKVRIFLLGLADNEAAIVQAESEETKERLFESMLSECRDAIQVVREELKPDQK 360
RTVPVKIDKVRIFLLGLADNEAAIVQAESEETKERLFESMLSECRDAIQVVREELKPDQK
Sbjct: 301 RTVPVKIDKVRIFLLGLADNEAAIVQAESEETKERLFESMLSECRDAIQVVREELKPDQK 360
Query: 361 QRDYILEGEPGKVSNLQYLHSYLTYIKLSTAIKRNENMAKGLQRALLQQQPEDDSKRSPR 420
QRDYILEGEPGKVSNLQYLHSYLTYIKLSTAIKRNENMAKGLQRALLQQQPEDDSKRSPR
Sbjct: 361 QRDYILEGEPGKVSNLQYLHSYLTYIKLSTAIKRNENMAKGLQRALLQQQPEDDSKRSPR 420
Query: 421 PQDLIRLYDIILQNLVELLQLPGLEEDKAFQKEIGLKTLVFKAYRCFFIAQSYVLVKKWS 480
PQDLIRLYDIILQNLVELLQLPGLEEDKAFQKEIGLKTLVFKAYRCFFIAQSYVLVKKWS
Sbjct: 421 PQDLIRLYDIILQNLVELLQLPGLEEDKAFQKEIGLKTLVFKAYRCFFIAQSYVLVKKWS 480
Query: 481 EALVLYDRVLKYANEVNSDAGAFKNSLKDLPDVQELITQVRSEKCSLQAAAILDANDAHQ 540
EALVLYDRVLKYANEVNSDAGAFKNSLKDLPDVQELITQVRSEKCSLQAAAILDANDAHQ
Sbjct: 481 EALVLYDRVLKYANEVNSDAGAFKNSLKDLPDVQELITQVRSEKCSLQAAAILDANDAHQ 540
Query: 541 TETSSSQVKDNKPLVERFETFCLDPSLVTKQANLVHFPPGFQPIPCKPLFFDLALNHVAF 600
TETSSSQVKDNKPLVERFETFCLDPSLVTKQANLVHFPPGFQPIPCKPLFFDLALNHVAF
Sbjct: 541 TETSSSQVKDNKPLVERFETFCLDPSLVTKQANLVHFPPGFQPIPCKPLFFDLALNHVAF 600
Query: 601 PPLEDKLEQKTKSGLTGYIKGIFGFRS 627
PPLEDKLEQKTKSGLTGYIKGIFGFRS
Sbjct: 601 PPLEDKLEQKTKSGLTGYIKGIFGFRS 627
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 58.2 bits (139), Expect = 2e-08
Identities = 24/27 (88%), Positives = 24/27 (88%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGGGGG GGGGGSGGGG GGG GAGG
Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGG 275
Score = 47.8 bits (112), Expect = 3e-05
Identities = 21/27 (77%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 9 GGGGGGGSGGGGGSGGGGSG-GGRGAG 34
GGGGGGG G GGG GGGG+G GG GAG
Sbjct: 253 GGGGGGGGGSGGGGGGGGAGAGGAGAG 279
Score = 42.7 bits (99), Expect = 0.001
Identities = 17/25 (68%), Positives = 17/25 (68%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGA 33
GGGGGG GGGGG G G G G GA
Sbjct: 256 GGGGGGSGGGGGGGGAGAGGAGAGA 280
Score = 40.8 bits (94), Expect = 0.004
Identities = 17/28 (60%), Positives = 17/28 (60%)
Query: 8 PGGGGGGGSGGGGGSGGGGSGGGRGAGG 35
PG G GGGGG GGGG G G G GG
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGG 268
Score = 38.9 bits (89), Expect = 0.014
Identities = 30/95 (31%), Positives = 35/95 (36%), Gaps = 26/95 (27%)
Query: 9 GGGGGGGSGGGGGSGGG-------------GSGGGRGAGGEEN-----KENERPSAGSKA 50
GGGGGGG G GG+G G G GGG G GG + G
Sbjct: 263 GGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMM 322
Query: 51 NKEFGDSLSLEILQIIKESQQQHGLRHGDFQRYRG 85
G + SL S+ G G FQR+ G
Sbjct: 323 GPGGGGAASL--------SKAAAGSAAGGFQRFAG 349
Score = 33.1 bits (74), Expect = 0.79
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Query: 2 AAEKQVPGGGGGGGSGGGGGSGGGG-------SGGG--RGAGGEENKENERPSAGSKA 50
AA GGGGG G GG S G G GGG G GG + +AGS A
Sbjct: 284 AAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAA 341
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 58.2 bits (139), Expect = 2e-08
Identities = 24/27 (88%), Positives = 24/27 (88%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGGGGG GGGGGSGGGG GGG GAGG
Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGG 275
Score = 47.8 bits (112), Expect = 3e-05
Identities = 21/27 (77%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 9 GGGGGGGSGGGGGSGGGGSG-GGRGAG 34
GGGGGGG G GGG GGGG+G GG GAG
Sbjct: 253 GGGGGGGGGSGGGGGGGGAGAGGAGAG 279
Score = 42.7 bits (99), Expect = 0.001
Identities = 17/25 (68%), Positives = 17/25 (68%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGA 33
GGGGGG GGGGG G G G G GA
Sbjct: 256 GGGGGGSGGGGGGGGAGAGGAGAGA 280
Score = 40.8 bits (94), Expect = 0.004
Identities = 17/28 (60%), Positives = 17/28 (60%)
Query: 8 PGGGGGGGSGGGGGSGGGGSGGGRGAGG 35
PG G GGGGG GGGG G G G GG
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGG 268
Score = 38.9 bits (89), Expect = 0.014
Identities = 30/95 (31%), Positives = 35/95 (36%), Gaps = 26/95 (27%)
Query: 9 GGGGGGGSGGGGGSGGG-------------GSGGGRGAGGEEN-----KENERPSAGSKA 50
GGGGGGG G GG+G G G GGG G GG + G
Sbjct: 263 GGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMM 322
Query: 51 NKEFGDSLSLEILQIIKESQQQHGLRHGDFQRYRG 85
G + SL S+ G G FQR+ G
Sbjct: 323 GPGGGGAASL--------SKAAAGSAAGGFQRFAG 349
Score = 33.1 bits (74), Expect = 0.79
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Query: 2 AAEKQVPGGGGGGGSGGGGGSGGGG-------SGGG--RGAGGEENKENERPSAGSKA 50
AA GGGGG G GG S G G GGG G GG + +AGS A
Sbjct: 284 AAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAA 341
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 58.2 bits (139), Expect = 2e-08
Identities = 24/27 (88%), Positives = 24/27 (88%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGGGGG GGGGGSGGGG GGG GAGG
Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGG 275
Score = 47.8 bits (112), Expect = 3e-05
Identities = 21/27 (77%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 9 GGGGGGGSGGGGGSGGGGSG-GGRGAG 34
GGGGGGG G GGG GGGG+G GG GAG
Sbjct: 253 GGGGGGGGGSGGGGGGGGAGAGGAGAG 279
Score = 42.7 bits (99), Expect = 0.001
Identities = 17/25 (68%), Positives = 17/25 (68%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGA 33
GGGGGG GGGGG G G G G GA
Sbjct: 256 GGGGGGSGGGGGGGGAGAGGAGAGA 280
Score = 40.8 bits (94), Expect = 0.004
Identities = 17/28 (60%), Positives = 17/28 (60%)
Query: 8 PGGGGGGGSGGGGGSGGGGSGGGRGAGG 35
PG G GGGGG GGGG G G G GG
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGG 268
Score = 38.9 bits (89), Expect = 0.014
Identities = 30/95 (31%), Positives = 35/95 (36%), Gaps = 26/95 (27%)
Query: 9 GGGGGGGSGGGGGSGGG-------------GSGGGRGAGGEEN-----KENERPSAGSKA 50
GGGGGGG G GG+G G G GGG G GG + G
Sbjct: 263 GGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMM 322
Query: 51 NKEFGDSLSLEILQIIKESQQQHGLRHGDFQRYRG 85
G + SL S+ G G FQR+ G
Sbjct: 323 GPGGGGAASL--------SKAAAGSAAGGFQRFAG 349
Score = 33.1 bits (74), Expect = 0.79
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Query: 2 AAEKQVPGGGGGGGSGGGGGSGGGG-------SGGG--RGAGGEENKENERPSAGSKA 50
AA GGGGG G GG S G G GGG G GG + +AGS A
Sbjct: 284 AAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAA 341
>gi|89145413 short stature homeobox 2 isoform a [Homo sapiens]
Length = 331
Score = 56.2 bits (134), Expect = 9e-08
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGDSLSLEILQIIKE 68
GGGGGGG GGGGG G GG G G GAGG + E ++ ++E G E+ +K+
Sbjct: 63 GGGGGGGGGGGGGGGVGGGGAGGGAGGGRSPVRELDMGAAERSREPGSPRLTEVSPELKD 122
Query: 69 SQQ 71
++
Sbjct: 123 RKE 125
>gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]
Length = 474
Score = 54.3 bits (129), Expect = 3e-07
Identities = 25/51 (49%), Positives = 29/51 (56%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGDSLS 59
GGGG GG GGGG S GG GGG GG +K ++ S GSK G +S
Sbjct: 162 GGGGHGGGGGGGSSNAGGGGGGASGGGANSKPAQKKSCGSKVAGGAGGGVS 212
Score = 41.2 bits (95), Expect = 0.003
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 16/51 (31%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGR----------------GAGGEENKENER 43
GGGGGGGS GG GGG SGGG GAGG +K + +
Sbjct: 167 GGGGGGGSSNAGGGGGGASGGGANSKPAQKKSCGSKVAGGAGGGVSKPHAK 217
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 53.9 bits (128), Expect = 4e-07
Identities = 23/33 (69%), Positives = 23/33 (69%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEENKEN 41
GGGGGGGSGGGGGS G G GGG G GG N
Sbjct: 75 GGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPN 107
Score = 49.7 bits (117), Expect = 8e-06
Identities = 25/58 (43%), Positives = 30/58 (51%)
Query: 2 AAEKQVPGGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGDSLS 59
AA GGGGGG G GGG G G+GGG G GG + N +A S + G +S
Sbjct: 66 AAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGIS 123
Score = 35.4 bits (80), Expect = 0.16
Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 7/34 (20%)
Query: 9 GGGGGGGSG-------GGGGSGGGGSGGGRGAGG 35
GGGGGGG G +G GG GGG AGG
Sbjct: 93 GGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGG 126
Score = 31.2 bits (69), Expect = 3.0
Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 15/66 (22%)
Query: 9 GGGGGGGS---------------GGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKE 53
GGGGGGGS GGGG S GGG + S+ S ++
Sbjct: 95 GGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSS 154
Query: 54 FGDSLS 59
S S
Sbjct: 155 SSSSSS 160
Score = 30.8 bits (68), Expect = 3.9
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 1 MAAEKQVPGGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKAN 51
+AA GGGGGG S GGG + G+ + + S+ S ++
Sbjct: 108 LAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSS 158
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 53.9 bits (128), Expect = 4e-07
Identities = 23/33 (69%), Positives = 23/33 (69%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEENKEN 41
GGGGGGGSGGGGGS G G GGG G GG N
Sbjct: 75 GGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPN 107
Score = 49.7 bits (117), Expect = 8e-06
Identities = 25/58 (43%), Positives = 30/58 (51%)
Query: 2 AAEKQVPGGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGDSLS 59
AA GGGGGG G GGG G G+GGG G GG + N +A S + G +S
Sbjct: 66 AAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGIS 123
Score = 35.4 bits (80), Expect = 0.16
Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 7/34 (20%)
Query: 9 GGGGGGGSG-------GGGGSGGGGSGGGRGAGG 35
GGGGGGG G +G GG GGG AGG
Sbjct: 93 GGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGG 126
Score = 31.2 bits (69), Expect = 3.0
Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 15/66 (22%)
Query: 9 GGGGGGGS---------------GGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKE 53
GGGGGGGS GGGG S GGG + S+ S ++
Sbjct: 95 GGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSS 154
Query: 54 FGDSLS 59
S S
Sbjct: 155 SSSSSS 160
Score = 30.8 bits (68), Expect = 3.9
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 1 MAAEKQVPGGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKAN 51
+AA GGGGGG S GGG + G+ + + S+ S ++
Sbjct: 108 LAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSS 158
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 53.9 bits (128), Expect = 4e-07
Identities = 23/33 (69%), Positives = 23/33 (69%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEENKEN 41
GGGGGGGSGGGGGS G G GGG G GG N
Sbjct: 75 GGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPN 107
Score = 49.7 bits (117), Expect = 8e-06
Identities = 25/58 (43%), Positives = 30/58 (51%)
Query: 2 AAEKQVPGGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGDSLS 59
AA GGGGGG G GGG G G+GGG G GG + N +A S + G +S
Sbjct: 66 AAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGIS 123
Score = 35.4 bits (80), Expect = 0.16
Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 7/34 (20%)
Query: 9 GGGGGGGSG-------GGGGSGGGGSGGGRGAGG 35
GGGGGGG G +G GG GGG AGG
Sbjct: 93 GGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGG 126
Score = 31.2 bits (69), Expect = 3.0
Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 15/66 (22%)
Query: 9 GGGGGGGS---------------GGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKE 53
GGGGGGGS GGGG S GGG + S+ S ++
Sbjct: 95 GGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSS 154
Query: 54 FGDSLS 59
S S
Sbjct: 155 SSSSSS 160
Score = 30.8 bits (68), Expect = 3.9
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 1 MAAEKQVPGGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKAN 51
+AA GGGGGG S GGG + G+ + + S+ S ++
Sbjct: 108 LAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSS 158
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 53.9 bits (128), Expect = 4e-07
Identities = 79/344 (22%), Positives = 138/344 (40%), Gaps = 71/344 (20%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAG---------GEE--NKENERPSAGSKANKEFG-D 56
GG GGGS GGGG GGGG GGG G G G E +N S +K +
Sbjct: 109 GGSFGGGSFGGGGFGGGGFGGGFGGGFGGDGGLLSGNEKVTMQNLNDRLASYLDKVRALE 168
Query: 57 SLSLEILQIIKESQQQHGLRH-GDFQRYRGYCSRRQRRLRKTLNFKMGNRHKFTGKKVTE 115
+ E+ IKE ++HG H G+ + Y Y + LN
Sbjct: 169 ESNYELEGKIKEWYEKHGNSHQGEPRDYSKYYKTIDDLKNQILN---------------- 212
Query: 116 ELLTDNRYLLLVLMDAERAWSYAMQLKQEANTEPRKRFHL-LSRLRKAVKHAEELERLCE 174
L TDN +LL + D R + +LK E R+ ++ LR+ L E
Sbjct: 213 -LTTDNANILLQI-DNARLAADDFRLKYENEVALRQSVEADINGLRRV---------LDE 261
Query: 175 SNRVDAKTKLEAQAYTAYLSGMLRFEHQEWK--------------------AAIEAFNKC 214
A +++ ++ T L+ + + +E K + N
Sbjct: 262 LTLTKADLEMQIESLTEELAYLKKNHEEEMKDLRNVSTGDVNVEMNAAPGVDLTQLLNNM 321
Query: 215 KTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGD-QSAINEL------MQMRLRS 267
++ YE+LA ++ +N++ +E++ I I +S I EL +++ L+S
Sbjct: 322 RSQYEQLAEQNRKDAEAWFNEKSKELTTEIDNNIEQISSYKSEITELRRNVQALEIELQS 381
Query: 268 GGTEGLLAEKLEALITQTRAKQAATMSEVEWRGRTVPVKIDKVR 311
+ L + LEA + +T + +S+++ + + ++ ++R
Sbjct: 382 ---QLALKQSLEASLAETEGRYCVQLSQIQAQISALEEQLQQIR 422
Score = 48.1 bits (113), Expect = 2e-05
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANK 52
GGG GGGS GGG S GGG GGG +GG +K + S G ++K
Sbjct: 539 GGGYGGGSSGGGSSSGGGYGGGSSSGG--HKSSSSGSVGESSSK 580
Score = 44.7 bits (104), Expect = 3e-04
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 9 GGGGGGGSGGGGGS-GGGGSGGGRGAGGEENKENERPSAGSKANKEFGDSLS 59
GG GGG SGGGGG GGG SGGG +GG + S ++ G+S S
Sbjct: 528 GGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESSS 579
Score = 43.9 bits (102), Expect = 4e-04
Identities = 24/51 (47%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 9 GGGGGGGSGG--GGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGDS 57
GGG GGG GG GGG GGG SGGG GG + GS + G S
Sbjct: 484 GGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGS 534
Score = 42.4 bits (98), Expect = 0.001
Identities = 18/27 (66%), Positives = 18/27 (66%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGG GG GGG GGG SGGG GG
Sbjct: 460 GGGGRGGGSFGGGYGGGSSGGGSSGGG 486
Score = 42.4 bits (98), Expect = 0.001
Identities = 18/26 (69%), Positives = 18/26 (69%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAG 34
GGG GG GGG SGGG SGGG G G
Sbjct: 465 GGGSFGGGYGGGSSGGGSSGGGHGGG 490
Score = 41.6 bits (96), Expect = 0.002
Identities = 18/27 (66%), Positives = 19/27 (70%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGG GGGS GGG SGGG GG G+ G
Sbjct: 470 GGGYGGGSSGGGSSGGGHGGGHGGSSG 496
Score = 41.6 bits (96), Expect = 0.002
Identities = 19/28 (67%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 9 GGGGGGGSGGG-GGSGGGGSGGGRGAGG 35
GG GGG GGG GGS GGG GGG GG
Sbjct: 480 GGSSGGGHGGGHGGSSGGGYGGGSSGGG 507
Score = 41.2 bits (95), Expect = 0.003
Identities = 21/51 (41%), Positives = 23/51 (45%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGDSLS 59
G GGG SGG GGS GG GGG GG GS + +G S
Sbjct: 512 GYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSS 562
Score = 40.8 bits (94), Expect = 0.004
Identities = 23/50 (46%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 9 GGGGGGGSGGGG---GSGGGGSGGGRGAGGEENKENERPSAGSKANKEFG 55
GGG GGGS GGG GS GGGS GG GG GS G
Sbjct: 461 GGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSG 510
Score = 40.4 bits (93), Expect = 0.005
Identities = 22/46 (47%), Positives = 24/46 (52%), Gaps = 7/46 (15%)
Query: 9 GGGGGGGSGGGGG-------SGGGGSGGGRGAGGEENKENERPSAG 47
GGGGGGG GGGGG S G GGG +GG R S+G
Sbjct: 18 GGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSG 63
Score = 40.0 bits (92), Expect = 0.006
Identities = 21/49 (42%), Positives = 22/49 (44%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGDS 57
G G GG G GGGS GGG GGG GG + GS G S
Sbjct: 455 GEGSSGGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGS 503
Score = 40.0 bits (92), Expect = 0.006
Identities = 21/50 (42%), Positives = 21/50 (42%)
Query: 10 GGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGDSLS 59
GGG GG GGGS GGG GGG G GS G S S
Sbjct: 470 GGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSS 519
Score = 38.9 bits (89), Expect = 0.014
Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 9 GGGGGGGSGGG--GGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGDSLS 59
G GGGG GGG GG GGGS GG +GG + S G G S
Sbjct: 457 GSSGGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSS 509
Score = 37.7 bits (86), Expect = 0.032
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 9 GGGGGGGSGG--GGGSGGGGSGGGRGAGGEENKENERPSAGSKA 50
GG GG SGG GG SGGGG G G G+ G + GS +
Sbjct: 520 GGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSS 563
Score = 35.0 bits (79), Expect = 0.21
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 9 GGGGGGGSGGGGGSGGG---GSGGGRGAGGEENKENERPSAGSK 49
GG GGG SGGG SGGG GS G E S G +
Sbjct: 540 GGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSKGPR 583
Score = 33.5 bits (75), Expect = 0.61
Identities = 16/30 (53%), Positives = 18/30 (60%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEEN 38
GG GG SGG GG GG G G RG+ G +
Sbjct: 64 GGCFGGSSGGYGGLGGFGGGSFRGSYGSSS 93
Score = 30.8 bits (68), Expect = 3.9
Identities = 17/46 (36%), Positives = 18/46 (39%)
Query: 10 GGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFG 55
GG GG GG GG GGG G G+ GS FG
Sbjct: 68 GGSSGGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFG 113
Score = 30.4 bits (67), Expect = 5.1
Identities = 12/15 (80%), Positives = 12/15 (80%)
Query: 16 SGGGGGSGGGGSGGG 30
SGGGGG GG G GGG
Sbjct: 16 SGGGGGGGGCGGGGG 30
Score = 30.4 bits (67), Expect = 5.1
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 9/44 (20%)
Query: 1 MAAEKQVPGGG--GGGGSGG-------GGGSGGGGSGGGRGAGG 35
+++ K GGG GG SGG GGG GG SGG G GG
Sbjct: 36 ISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGYGGLGG 79
Score = 30.0 bits (66), Expect = 6.7
Identities = 20/47 (42%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFG 55
GGG GGS GG G G GG GGG G + GS FG
Sbjct: 63 GGGCFGGSSGGYG-GLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFG 108
>gi|84570137 homeobox B3 [Homo sapiens]
Length = 431
Score = 53.1 bits (126), Expect = 7e-07
Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 18/92 (19%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGDS-LSLEILQIIK 67
G GGGGG GGGGGSGG G GGG G GG+++ GS A+K + S +++++ K
Sbjct: 152 GCGGGGGGGGGGGSGGSGGGGGGGGGGDKS------PPGSAASKRARTAYTSAQLVELEK 205
Query: 68 ESQQQHGLRHGDFQRYRGYCSRRQRRLRKTLN 99
E F RY C R+ + LN
Sbjct: 206 EFH---------FNRY--LCRPRRVEMANLLN 226
>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
Length = 920
Score = 52.4 bits (124), Expect = 1e-06
Identities = 24/39 (61%), Positives = 24/39 (61%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAG 47
GGGGGGG GGGGG GGGG GGG AG RP G
Sbjct: 451 GGGGGGGGGGGGGGGGGGGGGGGEAGAVAPYGYTRPPQG 489
Score = 51.2 bits (121), Expect = 3e-06
Identities = 21/28 (75%), Positives = 21/28 (75%)
Query: 8 PGGGGGGGSGGGGGSGGGGSGGGRGAGG 35
P GGGGGG GGGGG GGGG GGG G G
Sbjct: 449 PCGGGGGGGGGGGGGGGGGGGGGGGEAG 476
Score = 49.7 bits (117), Expect = 8e-06
Identities = 24/35 (68%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 2 AAEKQVPGGGGGGGSGGGGGSGGGGSGGGRGAGGE 36
A E Q+ G GGGG GGGGG GGGG GGG G GGE
Sbjct: 441 AEEGQLYGPCGGGGGGGGGGGGGGGGGGG-GGGGE 474
>gi|8051631 RNA binding protein (autoantigenic, hnRNP-associated
with lethal yellow) long isoform [Homo sapiens]
Length = 306
Score = 52.4 bits (124), Expect = 1e-06
Identities = 26/46 (56%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 5 KQVPGGGGGGGSGGGGGSGGGGSGGGRGAGGEE---NKENERPSAG 47
K+ GGG GG GGGGGSGGGGSGGG G G +EN AG
Sbjct: 222 KKKGDGGGAGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAG 267
Score = 47.4 bits (111), Expect = 4e-05
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGDS 57
G GGG G GGGGG GGG GG G GG + + S+A G++
Sbjct: 225 GDGGGAGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEA 273
Score = 43.9 bits (102), Expect = 4e-04
Identities = 21/45 (46%), Positives = 24/45 (53%)
Query: 2 AAEKQVPGGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSA 46
A +K P G G GG GG GGGG GG G+GG + RP A
Sbjct: 213 AEQKANPDGKKKGDGGGAGGGGGGGGSGGGGSGGGGGGGSSRPPA 257
Score = 43.1 bits (100), Expect = 8e-04
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERP-SAGSKANKEFGDSLSL 60
GGGGGG SGGGG GGGG G R +EN +E G ++ GD L
Sbjct: 233 GGGGGG-SGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEARTRDDGDEEGL 284
>gi|21396480 RNA binding protein (autoantigenic, hnRNP-associated
with lethal yellow) short isoform [Homo sapiens]
Length = 290
Score = 52.4 bits (124), Expect = 1e-06
Identities = 26/46 (56%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 5 KQVPGGGGGGGSGGGGGSGGGGSGGGRGAGGEE---NKENERPSAG 47
K+ GGG GG GGGGGSGGGGSGGG G G +EN AG
Sbjct: 206 KKKGDGGGAGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAG 251
Score = 47.4 bits (111), Expect = 4e-05
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGDS 57
G GGG G GGGGG GGG GG G GG + + S+A G++
Sbjct: 209 GDGGGAGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEA 257
Score = 43.9 bits (102), Expect = 4e-04
Identities = 21/45 (46%), Positives = 24/45 (53%)
Query: 2 AAEKQVPGGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSA 46
A +K P G G GG GG GGGG GG G+GG + RP A
Sbjct: 197 AEQKANPDGKKKGDGGGAGGGGGGGGSGGGGSGGGGGGGSSRPPA 241
Score = 43.1 bits (100), Expect = 8e-04
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERP-SAGSKANKEFGDSLSL 60
GGGGGG SGGGG GGGG G R +EN +E G ++ GD L
Sbjct: 217 GGGGGG-SGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEARTRDDGDEEGL 268
>gi|12056465 fibrillarin [Homo sapiens]
Length = 321
Score = 51.2 bits (121), Expect = 3e-06
Identities = 24/53 (45%), Positives = 29/53 (54%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGDSLSLE 61
GGG G GGGG GGGG GGGRG GG + N G K + G ++ +E
Sbjct: 37 GGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGKRGNQSGKNVMVE 89
Score = 40.0 bits (92), Expect = 0.006
Identities = 20/32 (62%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 8 PGGGGGGGSGG----GGGSGGGGSGGGRGAGG 35
P GGG GG GG GG G GG GGGRG GG
Sbjct: 7 PRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGG 38
>gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens]
Length = 588
Score = 51.2 bits (121), Expect = 3e-06
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG--------EENKENERPSAGSKANKEFGDSLSL 60
GGGGGGGSGGGGGS G +GGG G +E E + PS+ S + + D +
Sbjct: 8 GGGGGGGSGGGGGSSAGAAGGGDDLGANDELIPFQDEGGEEQEPSSDSASAQRDLDEVK- 66
Query: 61 EILQIIKESQQQHGLRHGDFQR 82
++ ES+ Q + +R
Sbjct: 67 --SSLVNESENQSSSSDSEAER 86
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 51.2 bits (121), Expect = 3e-06
Identities = 21/24 (87%), Positives = 21/24 (87%)
Query: 7 VPGGGGGGGSGGGGGSGGGGSGGG 30
VP GGGGGGSGGGGG GGGG GGG
Sbjct: 3504 VPTGGGGGGSGGGGGGGGGGGGGG 3527
Score = 40.0 bits (92), Expect = 0.006
Identities = 16/19 (84%), Positives = 16/19 (84%)
Query: 17 GGGGGSGGGGSGGGRGAGG 35
GGGGGSGGGG GGG G GG
Sbjct: 3508 GGGGGSGGGGGGGGGGGGG 3526
Score = 38.9 bits (89), Expect = 0.014
Identities = 18/37 (48%), Positives = 19/37 (51%)
Query: 14 GGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKA 50
GG GGG G GGGG GGG G G E G +A
Sbjct: 3507 GGGGGGSGGGGGGGGGGGGGGSYHCLACESALCGEEA 3543
Score = 36.6 bits (83), Expect = 0.072
Identities = 14/20 (70%), Positives = 15/20 (75%)
Query: 16 SGGGGGSGGGGSGGGRGAGG 35
+GGGGG GGG GGG G GG
Sbjct: 3506 TGGGGGGSGGGGGGGGGGGG 3525
>gi|197209826 chromosome 2 open reading frame 21 isoform 1 [Homo
sapiens]
Length = 3258
Score = 50.4 bits (119), Expect = 5e-06
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 11 GGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGDSLSLEILQIIKESQ 70
GGGG GGGGG GGGG GGG G + +K E+ + +N ++ ++I++ +
Sbjct: 745 GGGGDGGGGGGDGGGGGGGGGGPYEKNDKNQEKDESTPVSNHRLALTMLIKIVKSL---- 800
Query: 71 QQHGLRHGDFQRYRGYCSRRQR 92
G +G + +RG R R
Sbjct: 801 ---GCAYGCGEGHRGLSGDRLR 819
>gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens]
Length = 332
Score = 50.1 bits (118), Expect = 6e-06
Identities = 20/27 (74%), Positives = 22/27 (81%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGG GGGSGGG G+GGGG+GG G GG
Sbjct: 41 GGGAGGGSGGGNGAGGGGAGGAGGGGG 67
Score = 46.2 bits (108), Expect = 9e-05
Identities = 19/27 (70%), Positives = 19/27 (70%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
G G GGG G GGGSGGG GG GAGG
Sbjct: 35 GNGAGGGGGAGGGSGGGNGAGGGGAGG 61
Score = 45.4 bits (106), Expect = 2e-04
Identities = 20/25 (80%), Positives = 22/25 (88%), Gaps = 1/25 (4%)
Query: 11 GGGGGSGGGGGSGGGGSGGGRGAGG 35
GGG G+GGGGG+ GGGSGGG GAGG
Sbjct: 33 GGGNGAGGGGGA-GGGSGGGNGAGG 56
Score = 41.2 bits (95), Expect = 0.003
Identities = 17/34 (50%), Positives = 17/34 (50%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENE 42
G GGG G G G G GG G GG G GG E
Sbjct: 43 GAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPPEE 76
Score = 31.2 bits (69), Expect = 3.0
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 16 SGGGGGSGGGGSGGGRGAGG 35
S GGG GGG G G G+GG
Sbjct: 31 SSGGGNGAGGGGGAGGGSGG 50
>gi|5032007 purine-rich element binding protein A [Homo sapiens]
Length = 322
Score = 49.7 bits (117), Expect = 8e-06
Identities = 26/51 (50%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 8 PGGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSK----ANKEF 54
PG G G G GGGGG GGGGSGGG G G ++E SK NK F
Sbjct: 24 PGSGSGSGGGGGGGGGGGGSGGG-GGGAPGGLQHETQELASKRVDIQNKRF 73
Score = 43.5 bits (101), Expect = 6e-04
Identities = 18/26 (69%), Positives = 18/26 (69%)
Query: 10 GGGGGGSGGGGGSGGGGSGGGRGAGG 35
G G GSG GGG GGGG GGG G GG
Sbjct: 22 GHPGSGSGSGGGGGGGGGGGGSGGGG 47
Score = 39.7 bits (91), Expect = 0.008
Identities = 17/27 (62%), Positives = 18/27 (66%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
G G GSG G G GGGG GGG G+GG
Sbjct: 19 GSLGHPGSGSGSGGGGGGGGGGGGSGG 45
Score = 37.4 bits (85), Expect = 0.042
Identities = 16/25 (64%), Positives = 16/25 (64%)
Query: 10 GGGGGGSGGGGGSGGGGSGGGRGAG 34
GG G G G GSGGGG GGG G G
Sbjct: 18 GGSLGHPGSGSGSGGGGGGGGGGGG 42
Score = 35.8 bits (81), Expect = 0.12
Identities = 15/27 (55%), Positives = 15/27 (55%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
G GG G G G GGG GGG G GG
Sbjct: 16 GSGGSLGHPGSGSGSGGGGGGGGGGGG 42
Score = 33.1 bits (74), Expect = 0.79
Identities = 14/27 (51%), Positives = 14/27 (51%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GG G G G GGGG GGG G G
Sbjct: 18 GGSLGHPGSGSGSGGGGGGGGGGGGSG 44
Score = 32.7 bits (73), Expect = 1.0
Identities = 15/26 (57%), Positives = 15/26 (57%)
Query: 10 GGGGGGSGGGGGSGGGGSGGGRGAGG 35
GG GSGG G G GSG G G GG
Sbjct: 11 GGAALGSGGSLGHPGSGSGSGGGGGG 36
>gi|23510368 homeobox D11 [Homo sapiens]
Length = 338
Score = 49.3 bits (116), Expect = 1e-05
Identities = 21/26 (80%), Positives = 21/26 (80%)
Query: 10 GGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGGGGS GGG SGGG GGG GAGG
Sbjct: 77 GGGGGGSAGGGSSGGGPGGGGGGAGG 102
Score = 42.7 bits (99), Expect = 0.001
Identities = 18/28 (64%), Positives = 18/28 (64%)
Query: 8 PGGGGGGGSGGGGGSGGGGSGGGRGAGG 35
P GGGGG GGGS GGG GGG G G
Sbjct: 74 PYRGGGGGGSAGGGSSGGGPGGGGGGAG 101
Score = 32.3 bits (72), Expect = 1.3
Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 14/62 (22%)
Query: 2 AAEKQVP--GGGGGGGS------------GGGGGSGGGGSGGGRGAGGEENKENERPSAG 47
AA+K P G GGGGGS G GSGG G G AG E++ P
Sbjct: 207 AADKGDPRTGAGGGGGSPCTKATPGSEPKGAAEGSGGDGEGPPGEAGAEKSSSAVAPQRS 266
Query: 48 SK 49
K
Sbjct: 267 RK 268
>gi|125987596 sodium bicarbonate transporter 4 isoform a [Homo
sapiens]
Length = 1137
Score = 49.3 bits (116), Expect = 1e-05
Identities = 20/27 (74%), Positives = 21/27 (77%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGGG GG GG GGGGSGGG G+GG
Sbjct: 440 GGGGGAPGGGNGGGGGGGSGGGAGSGG 466
Score = 46.2 bits (108), Expect = 9e-05
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 7 VPGGGG--GGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKE 53
V GGGG GGG+GGGGG G GG G GAGG + ++ A + +E
Sbjct: 439 VGGGGGAPGGGNGGGGGGGSGGGAGSGGAGGTSSGDDGEMPAMHEIGEE 487
Score = 37.4 bits (85), Expect = 0.042
Identities = 17/32 (53%), Positives = 17/32 (53%)
Query: 3 AEKQVPGGGGGGGSGGGGGSGGGGSGGGRGAG 34
AE G GGG G GG GGG GGG G G
Sbjct: 430 AELGQMNGSVGGGGGAPGGGNGGGGGGGSGGG 461
Score = 33.1 bits (74), Expect = 0.79
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 9 GGGGGGGSGGGGGSGGG-GSGGGRGAGG 35
G G GGGG GGG G GGG G+GG
Sbjct: 433 GQMNGSVGGGGGAPGGGNGGGGGGGSGG 460
Score = 32.0 bits (71), Expect = 1.8
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 11 GGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKE 53
G GS GGGG GG GG G GG + G+ + +
Sbjct: 433 GQMNGSVGGGGGAPGGGNGGGGGGGSGGGAGSGGAGGTSSGDD 475
>gi|19743827 sodium bicarbonate transporter 4 isoform c [Homo
sapiens]
Length = 1121
Score = 49.3 bits (116), Expect = 1e-05
Identities = 20/27 (74%), Positives = 21/27 (77%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGGG GG GG GGGGSGGG G+GG
Sbjct: 440 GGGGGAPGGGNGGGGGGGSGGGAGSGG 466
Score = 46.2 bits (108), Expect = 9e-05
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 7 VPGGGG--GGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKE 53
V GGGG GGG+GGGGG G GG G GAGG + ++ A + +E
Sbjct: 439 VGGGGGAPGGGNGGGGGGGSGGGAGSGGAGGTSSGDDGEMPAMHEIGEE 487
Score = 37.4 bits (85), Expect = 0.042
Identities = 17/32 (53%), Positives = 17/32 (53%)
Query: 3 AEKQVPGGGGGGGSGGGGGSGGGGSGGGRGAG 34
AE G GGG G GG GGG GGG G G
Sbjct: 430 AELGQMNGSVGGGGGAPGGGNGGGGGGGSGGG 461
Score = 33.1 bits (74), Expect = 0.79
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 9 GGGGGGGSGGGGGSGGG-GSGGGRGAGG 35
G G GGGG GGG G GGG G+GG
Sbjct: 433 GQMNGSVGGGGGAPGGGNGGGGGGGSGG 460
Score = 32.0 bits (71), Expect = 1.8
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 11 GGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKE 53
G GS GGGG GG GG G GG + G+ + +
Sbjct: 433 GQMNGSVGGGGGAPGGGNGGGGGGGSGGGAGSGGAGGTSSGDD 475
>gi|33620755 YEATS domain containing 2 [Homo sapiens]
Length = 1422
Score = 49.3 bits (116), Expect = 1e-05
Identities = 24/42 (57%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 9 GGGGGGGSGGGGGSGGGGS-GGGRGAGGEENKENERPSAGSK 49
GGGGGGG GGG GSGGGGS GGG G G + P S+
Sbjct: 804 GGGGGGGGGGGSGSGGGGSTGGGGGTAGGGTQSTAGPGGISQ 845
Score = 47.0 bits (110), Expect = 5e-05
Identities = 19/27 (70%), Positives = 19/27 (70%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GG G GG GGGGG GG GSGGG GG
Sbjct: 799 GGSGAGGGGGGGGGGGSGSGGGGSTGG 825
Score = 46.2 bits (108), Expect = 9e-05
Identities = 19/27 (70%), Positives = 19/27 (70%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
G GGGGG GGGGGSG GG G G GG
Sbjct: 802 GAGGGGGGGGGGGSGSGGGGSTGGGGG 828
Score = 43.9 bits (102), Expect = 4e-04
Identities = 19/38 (50%), Positives = 21/38 (55%)
Query: 10 GGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAG 47
G GGGG GGGGG G G GG G GG + +AG
Sbjct: 802 GAGGGGGGGGGGGSGSGGGGSTGGGGGTAGGGTQSTAG 839
Score = 42.7 bits (99), Expect = 0.001
Identities = 17/27 (62%), Positives = 17/27 (62%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
G G GGG GGGGG G G GGG GG
Sbjct: 800 GSGAGGGGGGGGGGGSGSGGGGSTGGG 826
Score = 40.4 bits (93), Expect = 0.005
Identities = 18/28 (64%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 9 GGGGGGGSG-GGGGSGGGGSGGGRGAGG 35
G GGSG GGGG GGGG G G G GG
Sbjct: 794 GSAASGGSGAGGGGGGGGGGGSGSGGGG 821
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 48.9 bits (115), Expect = 1e-05
Identities = 22/47 (46%), Positives = 25/47 (53%)
Query: 10 GGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGD 56
GG GGGSGGG GSGGGG G G G GG + S + F +
Sbjct: 483 GGAGGGSGGGSGSGGGGGGAGGGGGGSSGGGSGTAGGHSGLSSNFNE 529
Score = 47.8 bits (112), Expect = 3e-05
Identities = 21/44 (47%), Positives = 23/44 (52%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANK 52
GGG GGGSG GGG GG G GGG +GG S N+
Sbjct: 486 GGGSGGGSGSGGGGGGAGGGGGGSSGGGSGTAGGHSGLSSNFNE 529
Score = 45.4 bits (106), Expect = 2e-04
Identities = 22/41 (53%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 9 GGGGGGGSGG--GGGSGGGGSGGGRGAGGEENKENERPSAG 47
GG G GG+GG GGGSG GG GGG G GG + +AG
Sbjct: 478 GGSGSGGAGGGSGGGSGSGGGGGGAGGGGGGSSGGGSGTAG 518
Score = 43.9 bits (102), Expect = 4e-04
Identities = 18/25 (72%), Positives = 18/25 (72%)
Query: 11 GGGGGSGGGGGSGGGGSGGGRGAGG 35
GGG GSGG GG GGGSG G G GG
Sbjct: 477 GGGSGSGGAGGGSGGGSGSGGGGGG 501
Score = 42.4 bits (98), Expect = 0.001
Identities = 17/27 (62%), Positives = 17/27 (62%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGG G G GGG GG GSGGG G G
Sbjct: 477 GGGSGSGGAGGGSGGGSGSGGGGGGAG 503
Score = 38.5 bits (88), Expect = 0.019
Identities = 18/34 (52%), Positives = 18/34 (52%)
Query: 2 AAEKQVPGGGGGGGSGGGGGSGGGGSGGGRGAGG 35
AA V GGGSG GG GG G G G G GG
Sbjct: 466 AAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGGG 499
>gi|6912752 zinc finger protein 281 [Homo sapiens]
Length = 895
Score = 48.9 bits (115), Expect = 1e-05
Identities = 21/36 (58%), Positives = 23/36 (63%)
Query: 10 GGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPS 45
GGGG GS GG GSGGGGSGGG G G + P+
Sbjct: 10 GGGGTGSSGGSGSGGGGSGGGGGGGSSGRRAEMEPT 45
Score = 35.8 bits (81), Expect = 0.12
Identities = 16/27 (59%), Positives = 16/27 (59%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
G G G GG G SGG GSGGG GG
Sbjct: 4 GSGFLSGGGGTGSSGGSGSGGGGSGGG 30
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 48.5 bits (114), Expect = 2e-05
Identities = 20/31 (64%), Positives = 22/31 (70%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEENK 39
GGGGGG GGGGG GG G GGG G GG + +
Sbjct: 360 GGGGGGWGGGGGGGGGWGGGGGGGRGGFQGR 390
Score = 48.1 bits (113), Expect = 2e-05
Identities = 22/31 (70%), Positives = 22/31 (70%), Gaps = 4/31 (12%)
Query: 9 GGGGGGGSGGGGGSGG----GGSGGGRGAGG 35
GGGGGGG GGGGG GG GG GGG G GG
Sbjct: 340 GGGGGGGRGGGGGGGGRGGWGGGGGGWGGGG 370
Score = 48.1 bits (113), Expect = 2e-05
Identities = 20/27 (74%), Positives = 20/27 (74%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGGGGG GG GG GGG GGG G GG
Sbjct: 349 GGGGGGGRGGWGGGGGGWGGGGGGGGG 375
Score = 47.8 bits (112), Expect = 3e-05
Identities = 20/27 (74%), Positives = 20/27 (74%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
G GG GG GGGGG GGGG GGGRG G
Sbjct: 334 GRGGWGGGGGGGGRGGGGGGGGRGGWG 360
Score = 47.4 bits (111), Expect = 4e-05
Identities = 22/33 (66%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 4 EKQVPGGGGGGGSGGGGGSGG-GGSGGGRGAGG 35
+K+ GGGG GG GGGGG GG GG GGG G GG
Sbjct: 326 QKRQEGGGGRGGWGGGGGGGGRGGGGGGGGRGG 358
Score = 47.4 bits (111), Expect = 4e-05
Identities = 20/27 (74%), Positives = 20/27 (74%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGGGGG GG G GGGG GGG G GG
Sbjct: 348 GGGGGGGGRGGWGGGGGGWGGGGGGGG 374
Score = 46.2 bits (108), Expect = 9e-05
Identities = 20/27 (74%), Positives = 20/27 (74%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGG GG GGGGG GGG GGG G GG
Sbjct: 352 GGGGRGGWGGGGGGWGGGGGGGGGWGG 378
Score = 45.8 bits (107), Expect = 1e-04
Identities = 19/26 (73%), Positives = 19/26 (73%)
Query: 10 GGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGGGG G GGG GGGG GG G GG
Sbjct: 339 GGGGGGGGRGGGGGGGGRGGWGGGGG 364
Score = 45.4 bits (106), Expect = 2e-04
Identities = 19/27 (70%), Positives = 19/27 (70%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGGGGG GGGG GGG G G G GG
Sbjct: 339 GGGGGGGGRGGGGGGGGRGGWGGGGGG 365
Score = 45.4 bits (106), Expect = 2e-04
Identities = 21/31 (67%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
Query: 9 GGGGGG----GSGGGGGSGGGGSGGGRGAGG 35
GGGGGG G GGGG GGGG GGG G GG
Sbjct: 350 GGGGGGRGGWGGGGGGWGGGGGGGGGWGGGG 380
Score = 45.4 bits (106), Expect = 2e-04
Identities = 19/27 (70%), Positives = 19/27 (70%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GG GGGG G GGG GGGG GG G GG
Sbjct: 357 GGWGGGGGGWGGGGGGGGGWGGGGGGG 383
Score = 45.1 bits (105), Expect = 2e-04
Identities = 19/27 (70%), Positives = 19/27 (70%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
G GGGGG GG GG GGGG GG G GG
Sbjct: 337 GWGGGGGGGGRGGGGGGGGRGGWGGGG 363
Score = 44.3 bits (103), Expect = 3e-04
Identities = 19/27 (70%), Positives = 19/27 (70%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
G GGGGG GG GG GGGG G G G GG
Sbjct: 346 GRGGGGGGGGRGGWGGGGGGWGGGGGG 372
Score = 43.9 bits (102), Expect = 4e-04
Identities = 18/25 (72%), Positives = 19/25 (76%)
Query: 10 GGGGGGSGGGGGSGGGGSGGGRGAG 34
GGGGGG GG GG GGGG GG +G G
Sbjct: 367 GGGGGGGGGWGGGGGGGRGGFQGRG 391
Score = 42.7 bits (99), Expect = 0.001
Identities = 20/31 (64%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
Query: 9 GGGGG----GGSGGGGGSGGGGSGGGRGAGG 35
GGGGG GG GGG G GGGG GG G GG
Sbjct: 351 GGGGGRGGWGGGGGGWGGGGGGGGGWGGGGG 381
Score = 42.7 bits (99), Expect = 0.001
Identities = 20/48 (41%), Positives = 23/48 (47%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGD 56
G GGGGG GGG G GGGG GG G+ G + +GD
Sbjct: 365 GWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGD 412
Score = 38.1 bits (87), Expect = 0.025
Identities = 17/27 (62%), Positives = 17/27 (62%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GG GG G G G GGGG GGG G GG
Sbjct: 403 GGYGGRGYGDPYGGGGGGGGGGGGGGG 429
Score = 37.7 bits (86), Expect = 0.032
Identities = 19/32 (59%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Query: 9 GGGGGGGSGGGGGSG-----GGGSGGGRGAGG 35
G GG GG GG GG G GGG GGG G GG
Sbjct: 395 GRGGYGGRGGYGGRGYGDPYGGGGGGGGGGGG 426
Score = 37.7 bits (86), Expect = 0.032
Identities = 17/27 (62%), Positives = 17/27 (62%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
G GG GG G G GGGG GGG G GG
Sbjct: 401 GRGGYGGRGYGDPYGGGGGGGGGGGGG 427
Score = 36.2 bits (82), Expect = 0.093
Identities = 14/17 (82%), Positives = 14/17 (82%)
Query: 8 PGGGGGGGSGGGGGSGG 24
P GGGGGG GGGGG GG
Sbjct: 413 PYGGGGGGGGGGGGGGG 429
Score = 35.0 bits (79), Expect = 0.21
Identities = 17/26 (65%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Query: 9 GGGGGG---GSGGGGGSGGGGSGGGR 31
GG G G G GGGGG GGGG GG R
Sbjct: 406 GGRGYGDPYGGGGGGGGGGGGGGGYR 431
Score = 33.9 bits (76), Expect = 0.46
Identities = 21/48 (43%), Positives = 21/48 (43%), Gaps = 21/48 (43%)
Query: 9 GGGGGG-----------GSGGGGGSGG----------GGSGGGRGAGG 35
GGGGGG G GG GG GG GG GGG G GG
Sbjct: 378 GGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGDPYGGGGGGGGGGG 425
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 48.1 bits (113), Expect = 2e-05
Identities = 19/27 (70%), Positives = 19/27 (70%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGG GG GGGGG GGGG G G GG
Sbjct: 381 GGGGSGGGGGGGGGGGGGGSGSTGGGG 407
Score = 46.6 bits (109), Expect = 7e-05
Identities = 19/26 (73%), Positives = 20/26 (76%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAG 34
G GGGGG GGGGG GG GS GG G+G
Sbjct: 384 GSGGGGGGGGGGGGGGSGSTGGGGSG 409
Score = 46.6 bits (109), Expect = 7e-05
Identities = 19/26 (73%), Positives = 19/26 (73%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAG 34
GGGGGGG GGGGG G GGG GAG
Sbjct: 386 GGGGGGGGGGGGGGSGSTGGGGSGAG 411
Score = 43.9 bits (102), Expect = 4e-04
Identities = 18/26 (69%), Positives = 18/26 (69%)
Query: 10 GGGGGGSGGGGGSGGGGSGGGRGAGG 35
G G S GGGGSGGGG GGG G GG
Sbjct: 373 GAGASNSSGGGGSGGGGGGGGGGGGG 398
Score = 43.5 bits (101), Expect = 6e-04
Identities = 20/48 (41%), Positives = 23/48 (47%)
Query: 1 MAAEKQVPGGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGS 48
+ A G G SGGGG GGGG GGG G GG + AG+
Sbjct: 365 VVASSTSTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGGGGSGAGT 412
Score = 36.2 bits (82), Expect = 0.093
Identities = 16/30 (53%), Positives = 17/30 (56%)
Query: 6 QVPGGGGGGGSGGGGGSGGGGSGGGRGAGG 35
QV G+G SGGGGSGGG G GG
Sbjct: 364 QVVASSTSTGAGASNSSGGGGSGGGGGGGG 393
Score = 33.1 bits (74), Expect = 0.79
Identities = 15/38 (39%), Positives = 16/38 (42%)
Query: 13 GGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKA 50
G G+ G GG G GGG G GG GS A
Sbjct: 373 GAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGGGGSGA 410
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 48.1 bits (113), Expect = 2e-05
Identities = 21/31 (67%), Positives = 22/31 (70%)
Query: 5 KQVPGGGGGGGSGGGGGSGGGGSGGGRGAGG 35
K GGGGGG GGGGG GGGG GGG G+ G
Sbjct: 63 KGAGAGGGGGGFGGGGGFGGGGGGGGGGSFG 93
Score = 45.1 bits (105), Expect = 2e-04
Identities = 19/27 (70%), Positives = 19/27 (70%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGG GG GG GG GGGG GG G GG
Sbjct: 70 GGGGFGGGGGFGGGGGGGGGGSFGGGG 96
Score = 45.1 bits (105), Expect = 2e-04
Identities = 20/27 (74%), Positives = 20/27 (74%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
G GGGGG GGGGG GGGGS GG G G
Sbjct: 73 GFGGGGGFGGGGGGGGGGSFGGGGPPG 99
Score = 44.7 bits (104), Expect = 3e-04
Identities = 19/27 (70%), Positives = 19/27 (70%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGGGG GGGG GGGG GGG GG
Sbjct: 68 GGGGGGFGGGGGFGGGGGGGGGGSFGG 94
Score = 44.7 bits (104), Expect = 3e-04
Identities = 19/27 (70%), Positives = 19/27 (70%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGGG G GGG G GGGG GGG GG
Sbjct: 69 GGGGGFGGGGGFGGGGGGGGGGSFGGG 95
Score = 42.7 bits (99), Expect = 0.001
Identities = 18/28 (64%), Positives = 18/28 (64%)
Query: 8 PGGGGGGGSGGGGGSGGGGSGGGRGAGG 35
P G G GG GGG G GGG GGG G GG
Sbjct: 62 PKGAGAGGGGGGFGGGGGFGGGGGGGGG 89
Score = 42.0 bits (97), Expect = 0.002
Identities = 18/27 (66%), Positives = 18/27 (66%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGG GG GGGGG G G GG G GG
Sbjct: 76 GGGGFGGGGGGGGGGSFGGGGPPGLGG 102
Score = 35.0 bits (79), Expect = 0.21
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAG-----GEENKENERPSAGSK 49
GGGGGGG G GG G G GG AG N++N+ S GS+
Sbjct: 82 GGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANRDND--SGGSR 125
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 48.1 bits (113), Expect = 2e-05
Identities = 21/31 (67%), Positives = 22/31 (70%)
Query: 5 KQVPGGGGGGGSGGGGGSGGGGSGGGRGAGG 35
K GGGGGG GGGGG GGGG GGG G+ G
Sbjct: 63 KGAGAGGGGGGFGGGGGFGGGGGGGGGGSFG 93
Score = 45.1 bits (105), Expect = 2e-04
Identities = 19/27 (70%), Positives = 19/27 (70%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGG GG GG GG GGGG GG G GG
Sbjct: 70 GGGGFGGGGGFGGGGGGGGGGSFGGGG 96
Score = 45.1 bits (105), Expect = 2e-04
Identities = 20/27 (74%), Positives = 20/27 (74%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
G GGGGG GGGGG GGGGS GG G G
Sbjct: 73 GFGGGGGFGGGGGGGGGGSFGGGGPPG 99
Score = 44.7 bits (104), Expect = 3e-04
Identities = 19/27 (70%), Positives = 19/27 (70%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGGGG GGGG GGGG GGG GG
Sbjct: 68 GGGGGGFGGGGGFGGGGGGGGGGSFGG 94
Score = 44.7 bits (104), Expect = 3e-04
Identities = 19/27 (70%), Positives = 19/27 (70%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGGG G GGG G GGGG GGG GG
Sbjct: 69 GGGGGFGGGGGFGGGGGGGGGGSFGGG 95
Score = 42.7 bits (99), Expect = 0.001
Identities = 18/28 (64%), Positives = 18/28 (64%)
Query: 8 PGGGGGGGSGGGGGSGGGGSGGGRGAGG 35
P G G GG GGG G GGG GGG G GG
Sbjct: 62 PKGAGAGGGGGGFGGGGGFGGGGGGGGG 89
Score = 42.0 bits (97), Expect = 0.002
Identities = 18/27 (66%), Positives = 18/27 (66%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAGG 35
GGGG GG GGGGG G G GG G GG
Sbjct: 76 GGGGFGGGGGGGGGGSFGGGGPPGLGG 102
Score = 35.0 bits (79), Expect = 0.21
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 9 GGGGGGGSGGGGGSGGGGSGGGRGAG-----GEENKENERPSAGSK 49
GGGGGGG G GG G G GG AG N++N+ S GS+
Sbjct: 82 GGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANRDND--SGGSR 125
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,600,324
Number of Sequences: 37866
Number of extensions: 1133298
Number of successful extensions: 31991
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 149
Number of HSP's that attempted gapping in prelim test: 13460
Number of HSP's gapped (non-prelim): 8212
length of query: 627
length of database: 18,247,518
effective HSP length: 108
effective length of query: 519
effective length of database: 14,157,990
effective search space: 7347996810
effective search space used: 7347996810
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.