Guide to the Human Genome
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Name: PURA Sequence: fasta or formatted (322aa) NCBI GI: 5032007
Description:

purine-rich element binding protein A

Referenced in:

Additional Cell Cycle Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         24           3
 C cysteine            0.6          2           1
 D aspartate           4.7         15           2
 E glutamate           9.0         29           3
 F phenylalanine       4.0         13           3
 G glycine            15.2         49          12
 H histidine           1.6          5           1
 I isoleucine          2.8          9           1
 K lysine              6.2         20           2
 L leucine             8.1         26           3
 M methionine          1.6          5           1
 N asparagine          2.8          9           1
 P proline             3.7         12           2
 Q glutamine           7.8         25           7
 R arginine            6.5         21           2
 S serine              6.2         20           1
 T threonine           3.7         12           1
 V valine              4.7         15           1
 W tryptophan          0.3          1           1
 Y tyrosine            3.1         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   purine-rich element binding protein A 
PURB                  0.577   purine-rich element binding protein B 
PURG                  0.442   purine-rich element binding protein G isoform A [Homo...
PURG                  0.349   purine-rich element binding protein G isoform B [Hom...
POU4F1                0.064   POU domain, class 4, transcription factor 1 
FAM98B                0.062   family with sequence similarity 98, member B isofor...
ZIC2                  0.061   zinc finger protein of the cerebellum 2 
CAPNS1                0.054   calpain, small subunit 1 
CAPNS1                0.054   calpain, small subunit 1 
KRT9                  0.054   keratin 9 
RFX1                  0.053   regulatory factor X1 
POU3F3                0.051   POU class 3 homeobox 3 
HOXB3                 0.051   homeobox B3 
YEATS2                0.051   YEATS domain containing 2 
KRT10                 0.050   keratin 10 
SHOX2                 0.050   short stature homeobox 2 isoform a 
KHSRP                 0.050   KH-type splicing regulatory protein 
ARID1B                0.050   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.050   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.050   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
AR                    0.048   androgen receptor isoform 1 
FZD8                  0.048   frizzled 8 
LRCH2                 0.048   leucine-rich repeats and calponin homology (CH) dom...
C2orf21               0.048   chromosome 2 open reading frame 21 isoform 1 
SIX3                  0.048   sine oculis homeobox homolog 3 
MAF                   0.048   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
MAF                   0.048   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
LOR                   0.048   loricrin 
FBL                   0.046   fibrillarin 
SOX4                  0.045   SRY (sex determining region Y)-box 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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