Guide to the Human Genome
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Name: C10orf4 Sequence: fasta or formatted (315aa) NCBI GI: 24432067
Description:

FRA10AC1 protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         12           2
 C cysteine            2.2          7           1
 D aspartate           8.3         26           2
 E glutamate          12.7         40           3
 F phenylalanine       5.1         16           2
 G glycine             5.4         17           2
 H histidine           3.8         12           2
 I isoleucine          2.5          8           1
 K lysine             15.2         48           3
 L leucine             7.9         25           3
 M methionine          1.3          4           1
 N asparagine          3.5         11           1
 P proline             1.0          3           1
 Q glutamine           2.5          8           1
 R arginine            6.7         21           2
 S serine              7.9         25           3
 T threonine           1.9          6           1
 V valine              2.9          9           1
 W tryptophan          1.6          5           1
 Y tyrosine            3.8         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FRA10AC1 protein 
LOXHD1                0.030   lipoxygenase homology domains 1 isoform 1 
LOC100294088          0.029   PREDICTED: hypothetical protein, partial 
LOC440243             0.027   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC727832             0.027   golgi autoantigen, golgin subfamily a-like 
CWF19L2               0.025   CWF19-like 2, cell cycle control 
ZMAT2                 0.025   zinc finger, matrin type 2 
RSF1                  0.024   remodeling and spacing factor 1 
GPATCH8               0.024   G patch domain containing 8 
ZRSR2                 0.024   U2 small nuclear RNA auxiliary factor 1-like 2 
UPF2                  0.022   UPF2 regulator of nonsense transcripts homolog [Homo...
UPF2                  0.022   UPF2 regulator of nonsense transcripts homolog [Homo...
RTF1                  0.022   Paf1/RNA polymerase II complex component 
CDC2L2                0.021   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.021   cell division cycle 2-like 2 isoform 1 
SRRT                  0.021   arsenate resistance protein 2 isoform d 
SRRT                  0.021   arsenate resistance protein 2 isoform a 
HRC                   0.021   histidine rich calcium binding protein precursor [Hom...
CDC2L1                0.021   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.021   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.021   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.021   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.021   cell division cycle 2-like 1 (PITSLRE proteins) isof...
LOC731605             0.021   PREDICTED: similar to BCL2-associated transcription...
LOC731605             0.021   PREDICTED: similar to BCL2-associated transcription...
ZFP106                0.021   zinc finger protein 106 homolog 
ARID4B                0.021   AT rich interactive domain 4B isoform 1 
FAM133A               0.021   hypothetical protein LOC286499 
CCAR1                 0.019   cell-cycle and apoptosis regulatory protein 1 
LOC100133599          0.019   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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