ZMAT2 13131

Name: ZMAT2	Sequence: fasta or formatted (199aa)		NCBI GI: 21389511
Description: zinc finger, matrin type 2		Referenced in: Zinc Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.5 7 2 C cysteine 1.5 3 1 D aspartate 7.5 15 2 E glutamate 13.6 27 4 F phenylalanine 3.5 7 1 G glycine 5.5 11 2 H histidine 1.5 3 1 I isoleucine 2.0 4 1 K lysine 17.1 34 3 L leucine 6.0 12 2 M methionine 4.0 8 1 N asparagine 3.0 6 1 P proline 1.5 3 1 Q glutamine 3.0 6 1 R arginine 7.5 15 2 S serine 5.0 10 1 T threonine 4.5 9 2 V valine 5.5 11 2 W tryptophan 0.5 1 1 Y tyrosine 3.5 7 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 zinc finger, matrin type 2 UPF2 0.063 UPF2 regulator of nonsense transcripts homolog [Homo... UPF2 0.063 UPF2 regulator of nonsense transcripts homolog [Homo... MYO6 0.061 myosin VI LOC100133599 0.058 PREDICTED: hypothetical protein LOC100294088 0.058 PREDICTED: hypothetical protein, partial LOC283685 0.055 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC283685 0.055 PREDICTED: golgi autoantigen, golgin subfamily a-li... EIF5B 0.055 eukaryotic translation initiation factor 5B GPATCH8 0.055 G patch domain containing 8 CROP 0.053 cisplatin resistance-associated overexpressed protei... CROP 0.053 cisplatin resistance-associated overexpressed protei... CALD1 0.047 caldesmon 1 isoform 5 CALD1 0.047 caldesmon 1 isoform 2 MAP7D2 0.047 MAP7 domain containing 2 TCHH 0.047 trichohyalin LOC727832 0.045 golgi autoantigen, golgin subfamily a-like CCDC55 0.045 coiled-coil domain containing 55 isoform 1 CALD1 0.045 caldesmon 1 isoform 4 CALD1 0.045 caldesmon 1 isoform 3 CALD1 0.045 caldesmon 1 isoform 1 RBM25 0.045 RNA binding motif protein 25 AP3D1 0.045 adaptor-related protein complex 3, delta 1 subunit ... LOC440243 0.045 PREDICTED: Putative golgin subfamily A member 6-lik... MYO10 0.045 myosin X SLTM 0.045 modulator of estrogen induced transcription isoform ... SLTM 0.045 modulator of estrogen induced transcription isoform ... CHAF1A 0.045 chromatin assembly factor 1, subunit A (p150) EZR 0.045 ezrin EZR 0.045 ezrin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.