Guide to the Human Genome
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Search of human proteins with 24308448

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|24308448 shugoshin-like 1 isoform C2 [Homo sapiens]
         (292 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|24308448 shugoshin-like 1 isoform C2 [Homo sapiens]                582   e-166
gi|60302873 shugoshin-like 1 isoform B2 [Homo sapiens]                571   e-163
gi|60302879 shugoshin-like 1 isoform C1 [Homo sapiens]                500   e-142
gi|60302877 shugoshin-like 1 isoform B1 [Homo sapiens]                489   e-139
gi|60302875 shugoshin-like 1 isoform A1 [Homo sapiens]                315   2e-86
gi|60302870 shugoshin-like 1 isoform A2 [Homo sapiens]                315   2e-86
gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens]    39   0.004
gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens]    39   0.004
gi|189217904 RPGRIP1-like isoform b [Homo sapiens]                     36   0.046
gi|39753953 zinc finger protein 800 [Homo sapiens]                     35   0.060
gi|126090663 zinc finger homeodomain 4 [Homo sapiens]                  34   0.13 
gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens]              34   0.17 
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]     34   0.17 
gi|118442834 RPGRIP1-like isoform a [Homo sapiens]                     34   0.17 
gi|145699123 dedicator of cytokinesis 11 [Homo sapiens]                33   0.23 
gi|122891870 melanoma inhibitory activity family, member 3 [Homo...    33   0.30 
gi|32698688 citron [Homo sapiens]                                      33   0.39 
gi|21264345 peripherin [Homo sapiens]                                  33   0.39 
gi|116235456 ring finger protein 214 [Homo sapiens]                    32   0.51 
gi|116235451 ring finger protein 214 [Homo sapiens]                    32   0.51 
gi|134133246 hypothetical protein LOC285753 [Homo sapiens]             32   0.51 
gi|28603844 hypothetical protein LOC285753 [Homo sapiens]              32   0.51 
gi|34878777 ring finger protein 20 [Homo sapiens]                      32   0.66 
gi|110815815 centlein isoform 1 [Homo sapiens]                         32   0.86 
gi|167555106 centlein isoform 2 [Homo sapiens]                         32   0.86 
gi|11034811 catenin (cadherin-associated protein), delta 2 (neur...    31   1.5  
gi|4505579 furin preproprotein [Homo sapiens]                          30   1.9  
gi|197333744 PCTAIRE protein kinase 1 isoform 2 [Homo sapiens]         30   1.9  
gi|5453860 PCTAIRE protein kinase 1 isoform 1 [Homo sapiens]           30   1.9  
gi|42794779 myosin 18A isoform b [Homo sapiens]                        30   1.9  

>gi|24308448 shugoshin-like 1 isoform C2 [Homo sapiens]
          Length = 292

 Score =  582 bits (1499), Expect = e-166
 Identities = 292/292 (100%), Positives = 292/292 (100%)

Query: 1   MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
           MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1   MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60

Query: 61  NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
           NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61  NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120

Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL 180
           GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL 180

Query: 181 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI 240
           YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI
Sbjct: 181 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI 240

Query: 241 FKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKCKLETHICLR 292
           FKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKCKLETHICLR
Sbjct: 241 FKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKCKLETHICLR 292


>gi|60302873 shugoshin-like 1 isoform B2 [Homo sapiens]
          Length = 309

 Score =  571 bits (1471), Expect = e-163
 Identities = 292/309 (94%), Positives = 292/309 (94%), Gaps = 17/309 (5%)

Query: 1   MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
           MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1   MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60

Query: 61  NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
           NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61  NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120

Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE-----------------ATPPE 163
           GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE                 ATPPE
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPPE 180

Query: 164 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK 223
           TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK
Sbjct: 181 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK 240

Query: 224 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKC 283
           LRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKC
Sbjct: 241 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKC 300

Query: 284 KLETHICLR 292
           KLETHICLR
Sbjct: 301 KLETHICLR 309


>gi|60302879 shugoshin-like 1 isoform C1 [Homo sapiens]
          Length = 258

 Score =  500 bits (1288), Expect = e-142
 Identities = 252/257 (98%), Positives = 254/257 (98%)

Query: 1   MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
           MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1   MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60

Query: 61  NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
           NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61  NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120

Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL 180
           GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL 180

Query: 181 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI 240
           YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI
Sbjct: 181 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI 240

Query: 241 FKQKKDLRRSKKRALEV 257
           FKQKKDLRRSKK   ++
Sbjct: 241 FKQKKDLRRSKKSMKQI 257


>gi|60302877 shugoshin-like 1 isoform B1 [Homo sapiens]
          Length = 275

 Score =  489 bits (1260), Expect = e-139
 Identities = 252/274 (91%), Positives = 254/274 (92%), Gaps = 17/274 (6%)

Query: 1   MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
           MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1   MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60

Query: 61  NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
           NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61  NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120

Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE-----------------ATPPE 163
           GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE                 ATPPE
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPPE 180

Query: 164 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK 223
           TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK
Sbjct: 181 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK 240

Query: 224 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEV 257
           LRRGDPFTDLCFLNSPIFKQKKDLRRSKK   ++
Sbjct: 241 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQI 274


>gi|60302875 shugoshin-like 1 isoform A1 [Homo sapiens]
          Length = 527

 Score =  315 bits (808), Expect = 2e-86
 Identities = 160/166 (96%), Positives = 160/166 (96%)

Query: 1   MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
           MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1   MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60

Query: 61  NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
           NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61  NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120

Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQ 166
           GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE   P   Q
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQ 166



 Score =  191 bits (484), Expect = 9e-49
 Identities = 96/114 (84%), Positives = 100/114 (87%)

Query: 144 EETELPGQGESFQIEATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVA 203
           +E E  G   +     TPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVA
Sbjct: 413 DEKETEGSKPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVA 472

Query: 204 LPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEV 257
           LPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKK   ++
Sbjct: 473 LPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQI 526


>gi|60302870 shugoshin-like 1 isoform A2 [Homo sapiens]
          Length = 561

 Score =  315 bits (808), Expect = 2e-86
 Identities = 160/166 (96%), Positives = 160/166 (96%)

Query: 1   MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
           MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1   MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60

Query: 61  NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
           NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61  NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120

Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQ 166
           GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE   P   Q
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQ 166



 Score =  272 bits (695), Expect = 3e-73
 Identities = 136/149 (91%), Positives = 138/149 (92%)

Query: 144 EETELPGQGESFQIEATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVA 203
           +E E  G   +     TPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVA
Sbjct: 413 DEKETEGSKPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVA 472

Query: 204 LPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEA 263
           LPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEA
Sbjct: 473 LPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEA 532

Query: 264 IFILYYVREFVSRFPDCRKCKLETHICLR 292
           IFILYYVREFVSRFPDCRKCKLETHICLR
Sbjct: 533 IFILYYVREFVSRFPDCRKCKLETHICLR 561


>gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens]
          Length = 971

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 22/81 (27%), Positives = 41/81 (50%)

Query: 8   KKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDNNKMLVLA 67
           K   Q  LE++K+ +++K N    EIG  +  +    Q + +   L+ + QD+ + L   
Sbjct: 407 KNQLQQELENLKEVLEDKLNTANQEIGHLQDMVRKSEQGLGSAEGLIASLQDSQERLQNE 466

Query: 68  LENEKSKVKEAQDIILQLRKE 88
           L+  K  +KE +D +L +  E
Sbjct: 467 LDLTKDSLKETKDALLNVEGE 487


>gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens]
          Length = 1140

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 22/81 (27%), Positives = 41/81 (50%)

Query: 8   KKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDNNKMLVLA 67
           K   Q  LE++K+ +++K N    EIG  +  +    Q + +   L+ + QD+ + L   
Sbjct: 527 KNQLQQELENLKEVLEDKLNTANQEIGHLQDMVRKSEQGLGSAEGLIASLQDSQERLQNE 586

Query: 68  LENEKSKVKEAQDIILQLRKE 88
           L+  K  +KE +D +L +  E
Sbjct: 587 LDLTKDSLKETKDALLNVEGE 607


>gi|189217904 RPGRIP1-like isoform b [Homo sapiens]
          Length = 1235

 Score = 35.8 bits (81), Expect = 0.046
 Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 8/132 (6%)

Query: 44   CQIITNTSTLLKNYQDNNKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKL 103
            C I    S  +K   +  ++ ++AL    S+V    D I +L     ++ C+ Y+L  + 
Sbjct: 1052 CIIPGPISKNIKQPSEKIRIEIIALSLNDSQVT-MDDTIQRL-----FVECRFYSLPAEE 1105

Query: 104  TSQQTVEPAQNQEICSSGMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPE 163
            T     +P   Q +  +  +    D   N   +D+ +  L++ E+P +   F + + PPE
Sbjct: 1106 TPVSLPKPKSGQWVYYNYSNVIYVDKENNKAKRDILKAILQKQEMPNRSLRFTVVSDPPE 1165

Query: 164  TQQSPHLSLKDI 175
             +Q   L  +DI
Sbjct: 1166 DEQD--LECEDI 1175


>gi|39753953 zinc finger protein 800 [Homo sapiens]
          Length = 664

 Score = 35.4 bits (80), Expect = 0.060
 Identities = 61/309 (19%), Positives = 119/309 (38%), Gaps = 53/309 (17%)

Query: 5   RCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIA-------APCQIITNTSTLLKNY 57
           R ++K  +  +E++KK ++ ++N N +  G+ ++ +          C+     + + +++
Sbjct: 247 RHIRKVHKKKMEELKKYIETRKNPNQSSKGRSKNVLVPLSRSCPVCCKSFATKANVRRHF 306

Query: 58  QDNNKMLVLALENEKSKVKEAQDIIL---------QLRKEC------YYLT-CQLYALKG 101
            + ++ L           K  Q + L         + RK+       Y LT C+    K 
Sbjct: 307 DEVHRGLRRDSITPDIATKPGQPLFLDSISPKKSFKTRKQKSSSKAEYNLTACKCLLCKR 366

Query: 102 KLTSQQTVEPAQN--QEICSSGMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEA 159
           K +SQ  ++       +I  SG +   +    N       ++ +E  +         +E+
Sbjct: 367 KYSSQIMLKRHMQIVHKITLSGTNSKREKGPNNTANSSEIKVKVEPAD--------SVES 418

Query: 160 TPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPT 219
           +PP    SP   LK  TN S       ++ + + +KNK       PK    ++   ++ T
Sbjct: 419 SPPSITHSPQNELKG-TNHS-----NEKKNTPAAQKNKVKQDSESPKSTSPSAAGGQQKT 472

Query: 220 LASKLRRGDPFTDL-CFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFP 278
              KL  G  F  L C L    F  K++L +     +E+      I++ +Y         
Sbjct: 473 RKPKLSAGFDFKQLYCKLCKRQFTSKQNLTKH----IELHTDGNNIYVKFY--------- 519

Query: 279 DCRKCKLET 287
            C  C  ET
Sbjct: 520 KCPLCTYET 528


>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
          Length = 3571

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 43/161 (26%), Positives = 61/161 (37%), Gaps = 20/161 (12%)

Query: 7    LKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQD--NNKML 64
            LK +FQ   +  K   K +   ++ E GK   +    C  I N   L  N  D   N + 
Sbjct: 928  LKANFQLHCKTDKHMQKYQLVAHIKEGGKSNEW-RLKCIAIGNPVHLKCNACDYYTNSVD 986

Query: 65   VLALENEKSKVKEAQDIILQLRKE--------CYYLTCQL-YALKGKLTSQQTVEPAQNQ 115
             L L     + + A  +   L+K+        CYY      Y  K KL   Q V   ++Q
Sbjct: 987  KLRLHTTNHRHEAALKLYKHLQKQEGAVNPESCYYYCAVCDYTTKVKLNLVQHVRSVKHQ 1046

Query: 116  E--------ICSSGMDPNSDDSSRNLFVKDLPQIPLEETEL 148
            +        +   G+ P  D+ S   FVKD P   LE   L
Sbjct: 1047 QTEGLRKLQLHQQGLAPEEDNLSEIFFVKDCPPNELETASL 1087


>gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens]
          Length = 1505

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 11/109 (10%)

Query: 100 KGKLTSQQTVEPAQNQEICSSGMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEA 159
           K +L  Q+T EPAQ      SG   NSDD+ R++  +   ++  ++  L    +   +  
Sbjct: 679 KRELQVQKTAEPAQPSSASGSG---NSDDAIRSILQQARREMEAQQAALDPALKQAPLSQ 735

Query: 160 TPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASP---AVALP 205
           +         LS   +  VS YP      L++S KK  A+P   A ALP
Sbjct: 736 SDITILTPKLLSTSPMPTVSSYP-----PLAISLKKPSAAPEAGASALP 779


>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
          Length = 2230

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 14/126 (11%)

Query: 6    CLKKSFQDSLEDIKKR---MKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN-- 60
            CLK   +D    ++K+   ++ +     A I +    I      I + + +LKNY     
Sbjct: 1497 CLKGEMEDDKSKMEKKESNLETELKSQTARIMELEDHITQKTIEIESLNEVLKNYNQQKD 1556

Query: 61   --NKMLVLAL-------ENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEP 111
              +K LV  L       E + ++VKEA++ IL L  + Y +  +L   K +L        
Sbjct: 1557 IEHKELVQKLQHFQELGEEKDNRVKEAEEKILTLENQVYSMKAELETKKKELEHVNLSVK 1616

Query: 112  AQNQEI 117
            ++ +E+
Sbjct: 1617 SKEEEL 1622


>gi|118442834 RPGRIP1-like isoform a [Homo sapiens]
          Length = 1315

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 91   YLTCQLYALKGKLTSQQTVEPAQNQEICSSGMDPNSDDSSRNLFVKDLPQIPLEETELPG 150
            ++ C+ Y+L  + T     +P   Q +  +  +    D   N   +D+ +  L++ E+P 
Sbjct: 1173 FVECRFYSLPAEETPVSLPKPKSGQWVYYNYSNVIYVDKENNKAKRDILKAILQKQEMPN 1232

Query: 151  QGESFQIEATPPETQQSPHLSLKDI 175
            +   F + + PPE +Q   L  +DI
Sbjct: 1233 RSLRFTVVSDPPEDEQD--LECEDI 1255


>gi|145699123 dedicator of cytokinesis 11 [Homo sapiens]
          Length = 2073

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 23/130 (17%)

Query: 14  SLEDIKKRMKE--KRNKNLAEIGKRRSFIAAPC------QIITNTSTLLKNYQDNNKMLV 65
           S EDI K + E  K  K   +I   +  I   C        IT++   LK ++ N + + 
Sbjct: 560 SSEDILKLLSEYKKPEKTKLQIIPGQLNITVECVPVDLSNCITSSYVPLKPFEKNCQNIT 619

Query: 66  LALENEKSKVKEAQDIILQLRKECYYLTCQ-----LYALKGKLTSQQTVEPAQNQEICSS 120
           +          E ++ + ++ K CY  T       +Y L+ K  SQ+T   A+N  +C  
Sbjct: 620 V----------EVEEFVPEMTKYCYPFTIYKNHLYVYPLQLKYDSQKTFAKARNIAVCVE 669

Query: 121 GMDPNSDDSS 130
             D +  D+S
Sbjct: 670 FRDSDESDAS 679


>gi|122891870 melanoma inhibitory activity family, member 3 [Homo
            sapiens]
          Length = 1907

 Score = 33.1 bits (74), Expect = 0.30
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 13/85 (15%)

Query: 51   STLLKNYQDNNKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVE 110
            S  LK     N  LV  L N + K+KE++  + + RK+   L+ +    K K+   +T+E
Sbjct: 1217 SEKLKTIMKENTELVQKLSNYEQKIKESKKHVQETRKQNMILSDEAIKYKDKI---KTLE 1273

Query: 111  PAQNQEICSSGMDPNSDDSSRNLFV 135
              +NQEI         DD+++NL V
Sbjct: 1274 --KNQEIL--------DDTAKNLRV 1288


>gi|32698688 citron [Homo sapiens]
          Length = 2027

 Score = 32.7 bits (73), Expect = 0.39
 Identities = 34/163 (20%), Positives = 75/163 (46%), Gaps = 14/163 (8%)

Query: 7   LKKSFQD--SLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDNNKML 64
           +KK   D  +LE++ +R +E+ ++    + ++++ I A    I +    +    + NK+ 
Sbjct: 732 IKKDLADKETLENMMQRHEEEAHEKGKILSEQKAMINAMDSKIRSLEQRIVELSEANKLA 791

Query: 65  VLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSSGMDP 124
             +    +  +K  +++I +LR++ +YL  Q     GKL +Q      Q ++I       
Sbjct: 792 ANSSLFTQRNMKAQEEMISELRQQKFYLETQ----AGKLEAQNRKLEEQLEKI------S 841

Query: 125 NSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQS 167
           + D S +N  ++   +  L E  L  + +  +++    E Q S
Sbjct: 842 HQDHSDKNRLLE--LETRLREVSLEHEEQKLELKRQLTELQLS 882



 Score = 30.0 bits (66), Expect = 2.5
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 4/83 (4%)

Query: 32   EIGKRRSFIAAPCQIITNTSTLLKNYQDNNKMLV---LALENEKSKVKEAQDIILQLRKE 88
            EI ++   +   C +IT+    L    ++N  L      L  +  +   A D I+QLR E
Sbjct: 931  EIQRKFDALRNSCTVITDLEEQLNQLTEDNAELNNQNFYLSKQLDEASGANDEIVQLRSE 990

Query: 89   CYYLTCQLYALKGKLTSQ-QTVE 110
              +L  ++   + +LTSQ QT+E
Sbjct: 991  VDHLRREITEREMQLTSQKQTME 1013


>gi|21264345 peripherin [Homo sapiens]
          Length = 470

 Score = 32.7 bits (73), Expect = 0.39
 Identities = 16/58 (27%), Positives = 31/58 (53%)

Query: 61  NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEIC 118
           N+  +    NEK +++E  D      ++  +L  Q  AL+G+L+  +  EPA+  ++C
Sbjct: 87  NQEFLATRSNEKQELQELNDRFANFIEKVRFLEQQNAALRGELSQARGQEPARADQLC 144


>gi|116235456 ring finger protein 214 [Homo sapiens]
          Length = 703

 Score = 32.3 bits (72), Expect = 0.51
 Identities = 62/296 (20%), Positives = 104/296 (35%), Gaps = 36/296 (12%)

Query: 8   KKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDNN----KM 63
           KK F    +D+K  +++     L E G+R  +     ++      + +N  +      K 
Sbjct: 297 KKEFLQKEQDLKAEIEK-----LCEKGRREVWEMELDRLKNQDGEINRNIMEETERAWKA 351

Query: 64  LVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSSG-- 121
            +L+LE+ K        ++L+L +        L  LK    + +TV   Q  E   +G  
Sbjct: 352 EILSLESRKEL------LVLKLEEAEKEAELHLTYLKSTPPTLETVRSKQEWETRLNGVR 405

Query: 122 -MDPNSDDSSRNLF--------VKDLPQIPLEETELPGQGESFQIEATPPETQQSPHL-- 170
            M  N  D   +          +  LPQIP      P     F ++   P    +P +  
Sbjct: 406 IMKKNVRDQFNSHIQLVRNGAKLSSLPQIPTPTLPPPPSETDFMLQVFQPSPSLAPRMPF 465

Query: 171 SLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPF 230
           S+  +T   + P    R LS  P  N A    + P      S     P L S +    P 
Sbjct: 466 SIGQVTMPMVMPSADPRSLSF-PILNPALSQPSQPSSPLPGSHGRNSPGLGSLVSPHGPH 524

Query: 231 TDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVRE-FVSRFPDCRKCKL 285
                   P             +A   +P  + +  L  + E  ++RFP C K ++
Sbjct: 525 M------PPAASIPPPPGLGGVKASAETPRPQPVDKLEKILEKLLTRFPQCNKAQM 574


>gi|116235451 ring finger protein 214 [Homo sapiens]
          Length = 703

 Score = 32.3 bits (72), Expect = 0.51
 Identities = 62/296 (20%), Positives = 104/296 (35%), Gaps = 36/296 (12%)

Query: 8   KKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDNN----KM 63
           KK F    +D+K  +++     L E G+R  +     ++      + +N  +      K 
Sbjct: 297 KKEFLQKEQDLKAEIEK-----LCEKGRREVWEMELDRLKNQDGEINRNIMEETERAWKA 351

Query: 64  LVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSSG-- 121
            +L+LE+ K        ++L+L +        L  LK    + +TV   Q  E   +G  
Sbjct: 352 EILSLESRKEL------LVLKLEEAEKEAELHLTYLKSTPPTLETVRSKQEWETRLNGVR 405

Query: 122 -MDPNSDDSSRNLF--------VKDLPQIPLEETELPGQGESFQIEATPPETQQSPHL-- 170
            M  N  D   +          +  LPQIP      P     F ++   P    +P +  
Sbjct: 406 IMKKNVRDQFNSHIQLVRNGAKLSSLPQIPTPTLPPPPSETDFMLQVFQPSPSLAPRMPF 465

Query: 171 SLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPF 230
           S+  +T   + P    R LS  P  N A    + P      S     P L S +    P 
Sbjct: 466 SIGQVTMPMVMPSADPRSLSF-PILNPALSQPSQPSSPLPGSHGRNSPGLGSLVSPHGPH 524

Query: 231 TDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVRE-FVSRFPDCRKCKL 285
                   P             +A   +P  + +  L  + E  ++RFP C K ++
Sbjct: 525 M------PPAASIPPPPGLGGVKASAETPRPQPVDKLEKILEKLLTRFPQCNKAQM 574


>gi|134133246 hypothetical protein LOC285753 [Homo sapiens]
          Length = 460

 Score = 32.3 bits (72), Expect = 0.51
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 19  KKRMKEKRN-KNLA--EIGKRRSFIAAPCQIITNTSTLLKNYQDNNKMLVLALENEKSKV 75
           KK ++ + N +NLA  E+ K++  I+       +  TLL+   +  K +VL +E EK+ +
Sbjct: 91  KKALENETNERNLAHQELIKQKKDISIQLSSAQSRCTLLEKQLEYTKRMVLNVEREKNMI 150

Query: 76  KEAQDIILQLRKECYYLTCQLYALKGKL 103
            E Q    QL++E      +LYA   KL
Sbjct: 151 LEQQ---AQLQREKEQDQMKLYAKLEKL 175


>gi|28603844 hypothetical protein LOC285753 [Homo sapiens]
          Length = 460

 Score = 32.3 bits (72), Expect = 0.51
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 19  KKRMKEKRN-KNLA--EIGKRRSFIAAPCQIITNTSTLLKNYQDNNKMLVLALENEKSKV 75
           KK ++ + N +NLA  E+ K++  I+       +  TLL+   +  K +VL +E EK+ +
Sbjct: 91  KKALENETNERNLAHQELIKQKKDISIQLSSAQSRCTLLEKQLEYTKRMVLNVEREKNMI 150

Query: 76  KEAQDIILQLRKECYYLTCQLYALKGKL 103
            E Q    QL++E      +LYA   KL
Sbjct: 151 LEQQ---AQLQREKEQDQMKLYAKLEKL 175


>gi|34878777 ring finger protein 20 [Homo sapiens]
          Length = 975

 Score = 32.0 bits (71), Expect = 0.66
 Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 1/115 (0%)

Query: 3   KERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDNNK 62
           +ER  +K  +   + +K+  KE+ +    E GK         +II      LK  Q++ K
Sbjct: 582 REREKEKEREREKQKLKESEKERDSAKDKEKGKHDDGRKKEAEIIKQLKIELKKAQESQK 641

Query: 63  MLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEI 117
            + L L+  +S  KE +D + QL         +L  L+ +L   +  E  +N+++
Sbjct: 642 EMKLLLDMYRSAPKEQRDKV-QLMAAEKKSKAELEDLRQRLKDLEDKEKKENKKM 695


>gi|110815815 centlein isoform 1 [Homo sapiens]
          Length = 1406

 Score = 31.6 bits (70), Expect = 0.86
 Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 23/115 (20%)

Query: 7   LKKSFQDSLEDIKK-----RMKEKRN----KNLAEIGKRRSFIAAPCQIITNTSTLLKNY 57
           L+K F+D  ++IK      + KE++N    KNL E  K+   ++  C  + N    L+  
Sbjct: 211 LEKKFKDKSQEIKDTKECVQNKEEQNRLVIKNLEEENKK---LSTRCTDLLNDLEKLRKQ 267

Query: 58  QDNNKMLVLALENEK----SKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQT 108
           + +       L  EK    +K+K  +D +++ RKE      +  AL  +L+++QT
Sbjct: 268 EAH-------LRKEKYSTDAKIKTFEDNLIEARKEVEVSQSKYNALSLQLSNKQT 315


>gi|167555106 centlein isoform 2 [Homo sapiens]
          Length = 391

 Score = 31.6 bits (70), Expect = 0.86
 Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 23/115 (20%)

Query: 7   LKKSFQDSLEDIKK-----RMKEKRN----KNLAEIGKRRSFIAAPCQIITNTSTLLKNY 57
           L+K F+D  ++IK      + KE++N    KNL E  K+   ++  C  + N    L+  
Sbjct: 211 LEKKFKDKSQEIKDTKECVQNKEEQNRLVIKNLEEENKK---LSTRCTDLLNDLEKLRKQ 267

Query: 58  QDNNKMLVLALENEK----SKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQT 108
           + +       L  EK    +K+K  +D +++ RKE      +  AL  +L+++QT
Sbjct: 268 EAH-------LRKEKYSTDAKIKTFEDNLIEARKEVEVSQSKYNALSLQLSNKQT 315


>gi|11034811 catenin (cadherin-associated protein), delta 2 (neural
            plakophilin-related arm-repeat protein) [Homo sapiens]
          Length = 1225

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 16/106 (15%)

Query: 88   ECYYLTCQLYALKGKLTSQQTVEPAQNQEICS----SGMDPNSDDSSRNLFVKDLPQIPL 143
            EC       +  KG+ TS++    AQN  I +    S   P  D     +  + +PQ P 
Sbjct: 1091 ECTGSNATYHGAKGEHTSRKDAMTAQNTGISTLYRNSYGAPAEDIKHNQVSAQPVPQEPS 1150

Query: 144  E---ETELPGQG------ESF---QIEATPPETQQSPHLSLKDITN 177
                ET  P Q       ESF   Q+   PP ++ + HL LK   N
Sbjct: 1151 RKDYETYQPFQNSTRNYDESFFEDQVHHRPPASEYTMHLGLKSTGN 1196


>gi|4505579 furin preproprotein [Homo sapiens]
          Length = 794

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 16/57 (28%), Positives = 27/57 (47%)

Query: 81  IILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSSGMDPNSDDSSRNLFVKD 137
           ++LQLR    +   ++Y +   L S + + P   QE C S  + +     R  F+KD
Sbjct: 734 LVLQLRSGFSFRGVKVYTMDRGLISYKGLPPEAWQEECPSDSEEDEGRGERTAFIKD 790


>gi|197333744 PCTAIRE protein kinase 1 isoform 2 [Homo sapiens]
          Length = 502

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 28/128 (21%)

Query: 139 PQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKA 198
           P+I  E+ ++   GES Q  AT  +  QSP               V++R  +  P+K   
Sbjct: 73  PEIVHEDLKMGSDGESDQASATSSDEVQSP---------------VRVRMRNHPPRKIS- 116

Query: 199 SPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVS 258
                      T  +N K  +L + +R  + + +   LNSPIF +    R  +    E+ 
Sbjct: 117 -----------TEDIN-KRLSLPADIRLPEGYLEKLTLNSPIFDKPLSRRLRRVSLSEIG 164

Query: 259 PAKEAIFI 266
             K   +I
Sbjct: 165 FGKLETYI 172


>gi|5453860 PCTAIRE protein kinase 1 isoform 1 [Homo sapiens]
          Length = 496

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 28/128 (21%)

Query: 139 PQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKA 198
           P+I  E+ ++   GES Q  AT  +  QSP               V++R  +  P+K   
Sbjct: 67  PEIVHEDLKMGSDGESDQASATSSDEVQSP---------------VRVRMRNHPPRKIS- 110

Query: 199 SPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVS 258
                      T  +N K  +L + +R  + + +   LNSPIF +    R  +    E+ 
Sbjct: 111 -----------TEDIN-KRLSLPADIRLPEGYLEKLTLNSPIFDKPLSRRLRRVSLSEIG 158

Query: 259 PAKEAIFI 266
             K   +I
Sbjct: 159 FGKLETYI 166


>gi|42794779 myosin 18A isoform b [Homo sapiens]
          Length = 2039

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 17/50 (34%), Positives = 27/50 (54%)

Query: 58   QDNNKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQ 107
            Q N + L   L + ++  +E+Q  + QL+K+C  LT +L   K  L  QQ
Sbjct: 1401 QQNKRQLERRLGDLQADSEESQRALQQLKKKCQRLTAELQDTKLHLEGQQ 1450


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.132    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,242,922
Number of Sequences: 37866
Number of extensions: 511071
Number of successful extensions: 1868
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 1824
Number of HSP's gapped (non-prelim): 102
length of query: 292
length of database: 18,247,518
effective HSP length: 101
effective length of query: 191
effective length of database: 14,423,052
effective search space: 2754802932
effective search space used: 2754802932
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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