Guide to the Human Genome
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Name: PCTK1 Sequence: fasta or formatted (502aa) NCBI GI: 197333744
Description:

PCTAIRE protein kinase 1 isoform 2

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt prot [496aa] PCTAIRE protein kinase 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         29           2
 C cysteine            0.8          4           1
 D aspartate           6.2         31           2
 E glutamate           7.8         39           2
 F phenylalanine       3.4         17           2
 G glycine             7.4         37           5
 H histidine           2.6         13           1
 I isoleucine          6.0         30           2
 K lysine              6.8         34           2
 L leucine            12.5         63           2
 M methionine          2.2         11           1
 N asparagine          3.0         15           1
 P proline             5.6         28           2
 Q glutamine           2.8         14           1
 R arginine            7.0         35           2
 S serine              7.6         38           3
 T threonine           5.8         29           2
 V valine              3.6         18           2
 W tryptophan          0.6          3           1
 Y tyrosine            2.8         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PCTAIRE protein kinase 1 isoform 2 
PCTK1                 0.990   PCTAIRE protein kinase 1 isoform 1 
PCTK2                 0.708   PCTAIRE protein kinase 2 
PCTK3                 0.592   PCTAIRE protein kinase 3 isoform b 
PCTK3                 0.592   PCTAIRE protein kinase 3 isoform b 
PCTK3                 0.585   PCTAIRE protein kinase 3 isoform a 
PFTK1                 0.359   PFTAIRE protein kinase 1 
PFTK2                 0.336   PFTAIRE protein kinase 2 
CDK5                  0.322   cyclin-dependent kinase 5 
CDK3                  0.308   cyclin-dependent kinase 3 
CDC2                  0.300   cell division cycle 2 isoform 1 
CDK2                  0.299   cyclin-dependent kinase 2 isoform 1 
CDC2                  0.298   cell division cycle 2 isoform 3 
CDK2                  0.232   cyclin-dependent kinase 2 isoform 2 
CDC2L1                0.219   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.219   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.219   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.219   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.219   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.219   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L2                0.217   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.217   cell division cycle 2-like 2 isoform 1 
CDK7                  0.208   cyclin-dependent kinase 7 
CDK10                 0.206   cyclin-dependent kinase 10 isoform a 
CDK9                  0.198   cyclin-dependent kinase 9 
CDC2L5                0.197   cell division cycle 2-like 5 isoform 1 
CDC2L5                0.197   cell division cycle 2-like 5 isoform 2 
CRKRS                 0.195   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.195   Cdc2-related kinase, arginine/serine-rich isoform 1...
CDK6                  0.189   cyclin-dependent kinase 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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