Guide to the Human Genome
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Name: PCTK1 Sequence: fasta or formatted (496aa) NCBI GI: 5453860
Description:

PCTAIRE protein kinase 1 isoform 1

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt prot [502aa] PCTAIRE protein kinase 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         28           2
 C cysteine            0.8          4           1
 D aspartate           6.2         31           2
 E glutamate           7.7         38           2
 F phenylalanine       3.4         17           2
 G glycine             7.5         37           5
 H histidine           2.6         13           1
 I isoleucine          5.8         29           2
 K lysine              6.9         34           2
 L leucine            12.7         63           2
 M methionine          2.0         10           1
 N asparagine          3.0         15           1
 P proline             5.6         28           2
 Q glutamine           2.6         13           1
 R arginine            7.1         35           2
 S serine              7.5         37           3
 T threonine           5.8         29           2
 V valine              3.6         18           2
 W tryptophan          0.6          3           1
 Y tyrosine            2.8         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PCTAIRE protein kinase 1 isoform 1 
PCTK1                 1.000   PCTAIRE protein kinase 1 isoform 2 
PCTK2                 0.715   PCTAIRE protein kinase 2 
PCTK3                 0.598   PCTAIRE protein kinase 3 isoform b 
PCTK3                 0.598   PCTAIRE protein kinase 3 isoform b 
PCTK3                 0.591   PCTAIRE protein kinase 3 isoform a 
PFTK1                 0.362   PFTAIRE protein kinase 1 
PFTK2                 0.340   PFTAIRE protein kinase 2 
CDK5                  0.325   cyclin-dependent kinase 5 
CDK3                  0.312   cyclin-dependent kinase 3 
CDC2                  0.303   cell division cycle 2 isoform 1 
CDK2                  0.302   cyclin-dependent kinase 2 isoform 1 
CDC2                  0.301   cell division cycle 2 isoform 3 
CDK2                  0.234   cyclin-dependent kinase 2 isoform 2 
CDC2L1                0.222   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.222   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.222   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.222   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.222   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.222   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L2                0.219   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.219   cell division cycle 2-like 2 isoform 1 
CDK7                  0.210   cyclin-dependent kinase 7 
CDK10                 0.208   cyclin-dependent kinase 10 isoform a 
CDK9                  0.200   cyclin-dependent kinase 9 
CDC2L5                0.199   cell division cycle 2-like 5 isoform 1 
CDC2L5                0.199   cell division cycle 2-like 5 isoform 2 
CRKRS                 0.197   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.197   Cdc2-related kinase, arginine/serine-rich isoform 1...
CDK6                  0.190   cyclin-dependent kinase 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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