Guide to the Human Genome
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Name: ZNF800 Sequence: fasta or formatted (664aa) NCBI GI: 39753953
Description:

zinc finger protein 800

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         27           2
 C cysteine            3.3         22           2
 D aspartate           4.8         32           2
 E glutamate           6.5         43           2
 F phenylalanine       2.7         18           1
 G glycine             3.6         24           2
 H histidine           3.8         25           4
 I isoleucine          5.4         36           2
 K lysine             12.2         81           3
 L leucine             6.6         44           2
 M methionine          0.8          5           1
 N asparagine          5.0         33           2
 P proline             6.2         41           3
 Q glutamine           5.0         33           2
 R arginine            5.6         37           2
 S serine              9.6         64           3
 T threonine           6.9         46           1
 V valine              5.6         37           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.4         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 800 
PRDM5                 0.034   PR domain containing 5 
ZNF840                0.032   PREDICTED: zinc finger protein 840 
ZNF840                0.032   PREDICTED: zinc finger protein 840 
ZNF840                0.032   PREDICTED: zinc finger protein 840 
RREB1                 0.031   ras responsive element binding protein 1 isoform 2 [...
ZNF462                0.027   zinc finger protein 462 
RREB1                 0.026   ras responsive element binding protein 1 isoform 1 [...
ZNF711                0.026   zinc finger protein 711 
ZBTB41                0.023   zinc finger and BTB domain containing 41 
ZNF585B               0.023   zinc finger protein 585B 
ZNF701                0.022   zinc finger protein 701 
LOC100287429          0.022   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.022   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.022   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.022   zinc finger protein 84 
ZNF84                 0.022   zinc finger protein 84 
ZIM3                  0.022   zinc finger, imprinted 3 
ZNF623                0.021   zinc finger protein 623 isoform 1 
ZNF623                0.021   zinc finger protein 623 isoform 2 
ZNF260                0.021   zinc finger protein 260 
ZNF146                0.020   zinc finger protein 146 
ZNF146                0.020   zinc finger protein 146 
ZNF146                0.020   zinc finger protein 146 
PRDM13                0.020   PR domain containing 13 
ZNF99                 0.020   zinc finger protein 99 
ZNF691                0.020   zinc finger protein 691 
ZNF423                0.020   zinc finger protein 423 
ZNF25                 0.020   zinc finger protein 25 
ZNF473                0.020   zinc finger protein 473 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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