Guide to the Human Genome
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Name: RNF214 Sequence: fasta or formatted (703aa) NCBI GI: 116235451
Description:

ring finger protein 214

Referenced in:

Ring Finger Proteins
Tetratricopeptide Domains

Other entries for this name:
alt mRNA [703aa] ring finger protein 214
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         49           2
 C cysteine            1.8         13           1
 D aspartate           4.1         29           3
 E glutamate           8.7         61           3
 F phenylalanine       1.8         13           1
 G glycine             4.3         30           2
 H histidine           2.3         16           1
 I isoleucine          3.7         26           1
 K lysine              7.3         51           3
 L leucine            10.7         75           2
 M methionine          2.7         19           2
 N asparagine          4.0         28           2
 P proline             8.0         56           4
 Q glutamine           6.8         48           2
 R arginine            5.0         35           2
 S serine              9.5         67           3
 T threonine           6.1         43           2
 V valine              5.3         37           2
 W tryptophan          0.6          4           1
 Y tyrosine            0.4          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 214 
RNF214                1.000   ring finger protein 214 
DZIP3                 0.071   DAZ interacting protein 3, zinc finger 
TTC3                  0.056   tetratricopeptide repeat domain 3 
TTC3                  0.056   tetratricopeptide repeat domain 3 
BAT2D1                0.030   HBxAg transactivated protein 2 
CENPF                 0.027   centromere protein F 
USH1C                 0.024   harmonin isoform b3 
YLPM1                 0.024   YLP motif containing 1 
ROCK2                 0.023   Rho-associated, coiled-coil containing protein kinas...
MYH11                 0.022   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.022   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.022   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.022   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
FMN1                  0.022   formin 1 
TAOK1                 0.021   TAO kinase 1 
CHAF1A                0.021   chromatin assembly factor 1, subunit A (p150) 
CCDC18                0.021   sarcoma antigen NY-SAR-41 
LOC100133758          0.021   PREDICTED: hypothetical protein, partial 
CENPE                 0.021   centromere protein E 
FHAD1                 0.021   forkhead-associated (FHA) phosphopeptide binding do...
ROCK1                 0.020   Rho-associated, coiled-coil containing protein kinase...
LOC440243             0.020   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC400352             0.020   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.020   PREDICTED: similar to Putative golgin subfamily A m...
TCHH                  0.020   trichohyalin 
PHLDB1                0.020   pleckstrin homology-like domain, family B, member 1...
PHLDB1                0.020   pleckstrin homology-like domain, family B, member 1 ...
RAPH1                 0.020   Ras association and pleckstrin homology domains 1 is...
KIF7                  0.020   kinesin family member 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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