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Search of human proteins with 239757749
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757749 PREDICTED: hypothetical protein [Homo sapiens]
(264 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757749 PREDICTED: hypothetical protein [Homo sapiens] 544 e-155
gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens] 526 e-150
gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens] 526 e-150
gi|239746769 PREDICTED: similar to Serine/threonine-protein kina... 493 e-140
gi|4826948 protein kinase, X-linked [Homo sapiens] 73 3e-13
gi|19111150 angiomotin isoform 2 [Homo sapiens] 52 4e-07
gi|166064029 angiomotin isoform 1 [Homo sapiens] 52 4e-07
gi|239756899 PREDICTED: hypothetical protein [Homo sapiens] 49 6e-06
gi|113427491 PREDICTED: hypothetical protein [Homo sapiens] 49 6e-06
gi|239745902 PREDICTED: hypothetical protein [Homo sapiens] 49 6e-06
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 47 2e-05
gi|153251840 zinc finger protein 839 [Homo sapiens] 47 2e-05
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 46 4e-05
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 46 4e-05
gi|58218966 hypothetical protein LOC339201 [Homo sapiens] 46 4e-05
gi|239753883 PREDICTED: hypothetical protein [Homo sapiens] 45 5e-05
gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo ... 45 5e-05
gi|239742378 PREDICTED: hypothetical protein XP_002342507 [Homo ... 45 5e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 45 6e-05
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 45 6e-05
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens] 45 6e-05
gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens] 45 6e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 45 8e-05
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 45 8e-05
gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo sapi... 44 1e-04
gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo sapi... 44 1e-04
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 44 1e-04
gi|6466466 RAN binding protein 3 isoform RANBP3-d [Homo sapiens] 44 1e-04
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 44 1e-04
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ... 44 1e-04
>gi|239757749 PREDICTED: hypothetical protein [Homo sapiens]
Length = 264
Score = 544 bits (1401), Expect = e-155
Identities = 264/264 (100%), Positives = 264/264 (100%)
Query: 1 MVCGPAVGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRE 60
MVCGPAVGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRE
Sbjct: 1 MVCGPAVGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRE 60
Query: 61 TGNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQP 120
TGNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQP
Sbjct: 61 TGNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQP 120
Query: 121 RPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPAR 180
RPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPAR
Sbjct: 121 RPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPAR 180
Query: 181 RPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLE 240
RPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLE
Sbjct: 181 RPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLE 240
Query: 241 AICVKVTSGETKGQERPTSLLATV 264
AICVKVTSGETKGQERPTSLLATV
Sbjct: 241 AICVKVTSGETKGQERPTSLLATV 264
>gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens]
Length = 317
Score = 526 bits (1355), Expect = e-150
Identities = 256/258 (99%), Positives = 257/258 (99%)
Query: 7 VGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG 66
+GSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG
Sbjct: 1 MGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG 60
Query: 67 PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA 126
PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA
Sbjct: 61 PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA 120
Query: 127 PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC 186
PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC
Sbjct: 121 PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC 180
Query: 187 VPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKV 246
VPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKV
Sbjct: 181 VPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKV 240
Query: 247 TSGETKGQERPTSLLATV 264
TSGETKGQE PTSLLATV
Sbjct: 241 TSGETKGQEWPTSLLATV 258
>gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens]
Length = 317
Score = 526 bits (1355), Expect = e-150
Identities = 255/258 (98%), Positives = 257/258 (99%)
Query: 7 VGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG 66
+GSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG
Sbjct: 1 MGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG 60
Query: 67 PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA 126
PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA
Sbjct: 61 PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA 120
Query: 127 PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC 186
PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC
Sbjct: 121 PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC 180
Query: 187 VPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKV 246
VPMKAPGLAQAAVAEETPDWAPELCPS E+RSPEPPANRLQDFDTLVTVGKQLEAICVKV
Sbjct: 181 VPMKAPGLAQAAVAEETPDWAPELCPSPESRSPEPPANRLQDFDTLVTVGKQLEAICVKV 240
Query: 247 TSGETKGQERPTSLLATV 264
TSGETKGQERPTSLLATV
Sbjct: 241 TSGETKGQERPTSLLATV 258
>gi|239746769 PREDICTED: similar to Serine/threonine-protein kinase
PRKX (Protein kinase PKX1) [Homo sapiens]
Length = 330
Score = 493 bits (1269), Expect = e-140
Identities = 241/242 (99%), Positives = 241/242 (99%)
Query: 23 GGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARAAAPAFPA 82
GGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARAAAPAFPA
Sbjct: 30 GGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARAAAPAFPA 89
Query: 83 ASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAG 142
ASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAG
Sbjct: 90 ASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAG 149
Query: 143 WPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEE 202
WPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEE
Sbjct: 150 WPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEE 209
Query: 203 TPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKVTSGETKGQERPTSLLA 262
TPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKVTSGETKGQE PTSLLA
Sbjct: 210 TPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKVTSGETKGQEWPTSLLA 269
Query: 263 TV 264
TV
Sbjct: 270 TV 271
>gi|4826948 protein kinase, X-linked [Homo sapiens]
Length = 358
Score = 72.8 bits (177), Expect = 3e-13
Identities = 39/56 (69%), Positives = 40/56 (71%), Gaps = 8/56 (14%)
Query: 189 MKAPGLAQAA--------VAEETPDWAPELCPSSEARSPEPPANRLQDFDTLVTVG 236
M+APGLAQAA VAEETPD AP LCPS EA SPEPP LQDFDTL TVG
Sbjct: 1 MEAPGLAQAAAAESDSRKVAEETPDGAPALCPSPEALSPEPPVYSLQDFDTLATVG 56
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 52.4 bits (124), Expect = 4e-07
Identities = 60/204 (29%), Positives = 80/204 (39%), Gaps = 18/204 (8%)
Query: 23 GGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGP---RLALQARAAAPA 79
G RA+ P P P P P + G R T +G + A A + PA
Sbjct: 421 GDYRAEYVPSTPSPVP----PSTPLLSAHSKTGSRDCSTQTERGTESNKTAAVAPISVPA 476
Query: 80 FPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAG 139
AA+ + + VAA V+ +P AA AP A A+ A
Sbjct: 477 PVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPA------AAAAPSPATAAATAAAV 530
Query: 140 WAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAV 199
Q A AS A AP + AA+A P + PA P P VP+ AP AQA+
Sbjct: 531 SPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAP--AAPAPVPAPALVPVPAPAAAQASA 588
Query: 200 AEET--PDWAPELCPSSEARSPEP 221
+T P AP + P + A +P P
Sbjct: 589 PAQTQAPTSAPAVAP-TPAPTPTP 611
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 52.4 bits (124), Expect = 4e-07
Identities = 60/204 (29%), Positives = 80/204 (39%), Gaps = 18/204 (8%)
Query: 23 GGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGP---RLALQARAAAPA 79
G RA+ P P P P P + G R T +G + A A + PA
Sbjct: 830 GDYRAEYVPSTPSPVP----PSTPLLSAHSKTGSRDCSTQTERGTESNKTAAVAPISVPA 885
Query: 80 FPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAG 139
AA+ + + VAA V+ +P AA AP A A+ A
Sbjct: 886 PVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPA------AAAAPSPATAAATAAAV 939
Query: 140 WAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAV 199
Q A AS A AP + AA+A P + PA P P VP+ AP AQA+
Sbjct: 940 SPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAP--AAPAPVPAPALVPVPAPAAAQASA 997
Query: 200 AEET--PDWAPELCPSSEARSPEP 221
+T P AP + P + A +P P
Sbjct: 998 PAQTQAPTSAPAVAP-TPAPTPTP 1020
>gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 48.5 bits (114), Expect = 6e-06
Identities = 58/200 (29%), Positives = 79/200 (39%), Gaps = 20/200 (10%)
Query: 5 PAVGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNA 64
P V P + E +DA GA A+ P PR R L AR + GG GRE
Sbjct: 64 PGVAPSPPAPEDSDARGEDGAAAERR-PEPRTR------DLSGAR-GQTTGGEGREGAQT 115
Query: 65 QGPRLAL---QARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPR 121
+ ++ L R AP P R P G G VA C + G P SP R+ R
Sbjct: 116 REGKMGLPDSARRPRAPRTPLRPERPAPGVPG------GRVAPCTCTSGSP-SPRPRRLR 168
Query: 122 PAARAPEGALASCGLRAGWAGWPPQAAWRAWGA-SVDAAAPPSEAASAEARLPERSGPAR 180
+ R L G+ PP+A+ W +++ A SA P PAR
Sbjct: 169 VSGRGSPAQLPPTYQLLGYHRAPPRASPGGWNTETLNTEDARRRARSATQAPPLALVPAR 228
Query: 181 -RPGPECVPMKAPGLAQAAV 199
R P + ++A G ++ V
Sbjct: 229 SRARPAHLRVRAAGRSRHRV 248
Score = 42.4 bits (98), Expect = 4e-04
Identities = 46/170 (27%), Positives = 57/170 (33%), Gaps = 31/170 (18%)
Query: 14 AEPTDAEKRGGARAKATPPAP-----RPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPR 68
A P +RG +PPAP R G R +G RG+ TG R
Sbjct: 53 AAPAGEPRRGDPGVAPSPPAPEDSDARGEDGAAAERRPEPRTRDLSGARGQTTGGEG--R 110
Query: 69 LALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPE 128
Q R P ++RR PR R PLR RPA P
Sbjct: 111 EGAQTREGKMGLPDSARR----PRAPRT-------------------PLRPERPAPGVPG 147
Query: 129 GALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGP 178
G +A C +G + P R G A PP+ R P R+ P
Sbjct: 148 GRVAPCTCTSG-SPSPRPRRLRVSGRGSPAQLPPTYQLLGYHRAPPRASP 196
Score = 28.5 bits (62), Expect = 6.3
Identities = 44/153 (28%), Positives = 54/153 (35%), Gaps = 29/153 (18%)
Query: 84 SRRSVPAPRGRRLLLPGAVAACAVSDGQP---LSPPLRQPRPAARAPEGALASCGLRAGW 140
SR P P RR LPGA A G P SPP + AR +GA A
Sbjct: 36 SRPIFPVPLARRTELPGAAPAGEPRRGDPGVAPSPPAPEDSD-ARGEDGAAAE------- 87
Query: 141 AGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGP--ARRPGPECVPMK----APGL 194
P+ R + A+ R + P ARRP P++ APG+
Sbjct: 88 --RRPEPRTRDLSGARGQTTGGEGREGAQTREGKMGLPDSARRPRAPRTPLRPERPAPGV 145
Query: 195 AQAAVAEETPDWAPELCPSSEARSPEPPANRLQ 227
V AP C S SP P RL+
Sbjct: 146 PGGRV-------APCTCTSG---SPSPRPRRLR 168
>gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 48.5 bits (114), Expect = 6e-06
Identities = 58/200 (29%), Positives = 79/200 (39%), Gaps = 20/200 (10%)
Query: 5 PAVGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNA 64
P V P + E +DA GA A+ P PR R L AR + GG GRE
Sbjct: 64 PGVAPSPPAPEDSDARGEDGAAAERR-PEPRTR------DLSGAR-GQTTGGEGREGAQT 115
Query: 65 QGPRLAL---QARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPR 121
+ ++ L R AP P R P G G VA C + G P SP R+ R
Sbjct: 116 REGKMGLPDSARRPRAPRTPLRPERPAPGVPG------GRVAPCTCTSGSP-SPRPRRLR 168
Query: 122 PAARAPEGALASCGLRAGWAGWPPQAAWRAWGA-SVDAAAPPSEAASAEARLPERSGPAR 180
+ R L G+ PP+A+ W +++ A SA P PAR
Sbjct: 169 VSGRGSPAQLPPTYQLLGYHRAPPRASPGGWNTETLNTEDARRRARSATQAPPLALVPAR 228
Query: 181 -RPGPECVPMKAPGLAQAAV 199
R P + ++A G ++ V
Sbjct: 229 SRARPAHLRVRAAGRSRHRV 248
Score = 42.4 bits (98), Expect = 4e-04
Identities = 46/170 (27%), Positives = 57/170 (33%), Gaps = 31/170 (18%)
Query: 14 AEPTDAEKRGGARAKATPPAP-----RPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPR 68
A P +RG +PPAP R G R +G RG+ TG R
Sbjct: 53 AAPAGEPRRGDPGVAPSPPAPEDSDARGEDGAAAERRPEPRTRDLSGARGQTTGGEG--R 110
Query: 69 LALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPE 128
Q R P ++RR PR R PLR RPA P
Sbjct: 111 EGAQTREGKMGLPDSARR----PRAPRT-------------------PLRPERPAPGVPG 147
Query: 129 GALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGP 178
G +A C +G + P R G A PP+ R P R+ P
Sbjct: 148 GRVAPCTCTSG-SPSPRPRRLRVSGRGSPAQLPPTYQLLGYHRAPPRASP 196
Score = 28.5 bits (62), Expect = 6.3
Identities = 44/153 (28%), Positives = 54/153 (35%), Gaps = 29/153 (18%)
Query: 84 SRRSVPAPRGRRLLLPGAVAACAVSDGQP---LSPPLRQPRPAARAPEGALASCGLRAGW 140
SR P P RR LPGA A G P SPP + AR +GA A
Sbjct: 36 SRPIFPVPLARRTELPGAAPAGEPRRGDPGVAPSPPAPEDSD-ARGEDGAAAE------- 87
Query: 141 AGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGP--ARRPGPECVPMK----APGL 194
P+ R + A+ R + P ARRP P++ APG+
Sbjct: 88 --RRPEPRTRDLSGARGQTTGGEGREGAQTREGKMGLPDSARRPRAPRTPLRPERPAPGV 145
Query: 195 AQAAVAEETPDWAPELCPSSEARSPEPPANRLQ 227
V AP C S SP P RL+
Sbjct: 146 PGGRV-------APCTCTSG---SPSPRPRRLR 168
>gi|239745902 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 48.5 bits (114), Expect = 6e-06
Identities = 58/200 (29%), Positives = 79/200 (39%), Gaps = 20/200 (10%)
Query: 5 PAVGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNA 64
P V P + E +DA GA A+ P PR R L AR + GG GRE
Sbjct: 64 PGVAPSPPAPEDSDARGEDGAAAERR-PEPRTR------DLSGAR-GQTTGGEGREGAQT 115
Query: 65 QGPRLAL---QARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPR 121
+ ++ L R AP P R P G G VA C + G P SP R+ R
Sbjct: 116 REGKMGLPDSARRPRAPRTPLRPERPAPGVPG------GRVAPCTCTSGSP-SPRPRRLR 168
Query: 122 PAARAPEGALASCGLRAGWAGWPPQAAWRAWGA-SVDAAAPPSEAASAEARLPERSGPAR 180
+ R L G+ PP+A+ W +++ A SA P PAR
Sbjct: 169 VSGRGSPAQLPPTYQLLGYHRAPPRASPGGWNTETLNTEDARRRARSATQAPPLALVPAR 228
Query: 181 -RPGPECVPMKAPGLAQAAV 199
R P + ++A G ++ V
Sbjct: 229 SRARPAHLRVRAAGRSRHRV 248
Score = 42.4 bits (98), Expect = 4e-04
Identities = 46/170 (27%), Positives = 57/170 (33%), Gaps = 31/170 (18%)
Query: 14 AEPTDAEKRGGARAKATPPAP-----RPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPR 68
A P +RG +PPAP R G R +G RG+ TG R
Sbjct: 53 AAPAGEPRRGDPGVAPSPPAPEDSDARGEDGAAAERRPEPRTRDLSGARGQTTGGEG--R 110
Query: 69 LALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPE 128
Q R P ++RR PR R PLR RPA P
Sbjct: 111 EGAQTREGKMGLPDSARR----PRAPRT-------------------PLRPERPAPGVPG 147
Query: 129 GALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGP 178
G +A C +G + P R G A PP+ R P R+ P
Sbjct: 148 GRVAPCTCTSG-SPSPRPRRLRVSGRGSPAQLPPTYQLLGYHRAPPRASP 196
Score = 28.5 bits (62), Expect = 6.3
Identities = 44/153 (28%), Positives = 54/153 (35%), Gaps = 29/153 (18%)
Query: 84 SRRSVPAPRGRRLLLPGAVAACAVSDGQP---LSPPLRQPRPAARAPEGALASCGLRAGW 140
SR P P RR LPGA A G P SPP + AR +GA A
Sbjct: 36 SRPIFPVPLARRTELPGAAPAGEPRRGDPGVAPSPPAPEDSD-ARGEDGAAAE------- 87
Query: 141 AGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGP--ARRPGPECVPMK----APGL 194
P+ R + A+ R + P ARRP P++ APG+
Sbjct: 88 --RRPEPRTRDLSGARGQTTGGEGREGAQTREGKMGLPDSARRPRAPRTPLRPERPAPGV 145
Query: 195 AQAAVAEETPDWAPELCPSSEARSPEPPANRLQ 227
V AP C S SP P RL+
Sbjct: 146 PGGRV-------APCTCTSG---SPSPRPRRLR 168
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 46.6 bits (109), Expect = 2e-05
Identities = 64/202 (31%), Positives = 73/202 (36%), Gaps = 29/202 (14%)
Query: 32 PAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPA- 90
PAPRP PG P RA+ R R T A P A R P
Sbjct: 921 PAPRPAPG----PAPFVPRERASVDRWRRTKGAGPP-------GGAGLADGFHRYYGPIE 969
Query: 91 PRGRRLLLPGAVAACAVSDGQPLSPPLRQP--RP------AARAPEGALASCGLRAGWAG 142
P+G L L A AA + G+PLSPP QP +P R E A G G+
Sbjct: 970 PQGLGLGLGEARAAPRGAAGRPLSPPAAQPPQKPPPSYFAIVRDKEPAEPPAGAFPGFPS 1029
Query: 143 --WPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAVA 200
PP AA A G + A E+ A AR P R PE P+ PG A
Sbjct: 1030 PPAPPAAAATAVGPPLCRLAFEDESPPAPARWP-------RSDPESQPLLGPGAGGAGGT 1082
Query: 201 EETPDWAPELCPSSEARSPEPP 222
AP P A P P
Sbjct: 1083 GGAGGGAPAAPPPCRAAPPPCP 1104
>gi|153251840 zinc finger protein 839 [Homo sapiens]
Length = 927
Score = 46.6 bits (109), Expect = 2e-05
Identities = 22/28 (78%), Positives = 24/28 (85%)
Query: 237 KQLEAICVKVTSGETKGQERPTSLLATV 264
+QLEAICVKVTSGETKGQERP L T+
Sbjct: 96 QQLEAICVKVTSGETKGQERPMLLPTTI 123
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 45.8 bits (107), Expect = 4e-05
Identities = 67/243 (27%), Positives = 85/243 (34%), Gaps = 32/243 (13%)
Query: 4 GPAVGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGN 63
GP + S P G R + PPA PG P RA+G
Sbjct: 78 GPTRSAGTSSRNPASRPPASG-RGERAPPAKNTSPGPVSSP------GRASGTTRPGPLG 130
Query: 64 AQGPRLALQ---ARAAAPAFPAASRRSVPAPRGRRLLLPGAVA--------ACAVSDGQP 112
+G R++ + AR A P S S A R PG + A G P
Sbjct: 131 QKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLP 190
Query: 113 LSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEA-- 170
P +PRP P +++S + P AA R A P S + S+ A
Sbjct: 191 RPAPSARPRPPTEGPRKSVSSASEHS--TTEPSPAARRRPSAGGGLQRPASRSLSSSATP 248
Query: 171 -RLPERSGPARRPGPEC----VPMKAPGLAQAAVAEETP---DWAPELCP--SSEARSPE 220
P RSGP+ R P K GL + TP D AP L P SS +P
Sbjct: 249 LSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPS 308
Query: 221 PPA 223
P A
Sbjct: 309 PSA 311
Score = 44.3 bits (103), Expect = 1e-04
Identities = 68/259 (26%), Positives = 89/259 (34%), Gaps = 62/259 (23%)
Query: 5 PAVGSYPWSAEPTDAEKRGGARAKATPPAP----RPRPGG---FRPPL---QRARCYRAA 54
PA S SA P + R G A+ TP AP +P+P G RPP R A
Sbjct: 237 PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPAL 296
Query: 55 GGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLS 114
G P ALQ++ A P PA S C ++ PL+
Sbjct: 297 GPLSSSPLATPSPSAALQSQ-APPTLPATPHSS--------------SLTCQLATPLPLA 341
Query: 115 PPLRQ--------PRPAARAPEGALASCG---LRAGWAGWPPQAAWRAWGASVDAAAPPS 163
PP P P A P A S G L+A + P A PP
Sbjct: 342 PPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPL-------SPLATPPP 394
Query: 164 EAASAEARLPERSGPARRPGPECVPMKAPG----------LAQA---------AVAEETP 204
+A A A P ++ P+ P P+ P L QA A +P
Sbjct: 395 QAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSP 454
Query: 205 DWAPELCPSSEARSPEPPA 223
+P + PS+ S PP+
Sbjct: 455 PASPPVSPSATPPSQAPPS 473
Score = 37.0 bits (84), Expect = 0.018
Identities = 43/162 (26%), Positives = 59/162 (36%), Gaps = 37/162 (22%)
Query: 71 LQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGA 130
LQA + PA P S + P+P+ P A+A + P SPP P P +AP
Sbjct: 405 LQAPPSPPASPPLSPLATPSPQA-----PNALAVHLLQ--APFSPP---PSPPVQAPFSP 454
Query: 131 LASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMK 190
AS PP + +A PPS+A + A P + P+ P P
Sbjct: 455 PAS----------PPVSP---------SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSA 495
Query: 191 AP--------GLAQAAVAEETPDWAPELCPSSEARSPEPPAN 224
P +A+ P P L P PPA+
Sbjct: 496 TPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPAS 537
Score = 34.3 bits (77), Expect = 0.11
Identities = 65/229 (28%), Positives = 81/229 (35%), Gaps = 47/229 (20%)
Query: 29 ATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARAA-----APAFPAA 83
ATPP P P PPLQ A+ A A P AL + A AP P+A
Sbjct: 495 ATPPPQAPPPLA-APPLQLAKPPPQA-----PPALATPPLQALPSPPASFPGQAPFSPSA 548
Query: 84 SRR----SVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPR-PAARAPEGALASCGLRA 138
S + P P+ +L A V P SP L+ PR P P+ +++ L
Sbjct: 549 SLPMSPLATPPPQAPPVL---AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTL 605
Query: 139 GWAGWPPQAAWRAWGASV---DAAAPPSEAASAEARL------PERSGPARRPGPE---- 185
A PP R+ +++ D A S A S L PE G A P P+
Sbjct: 606 ALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPE-GGAAASPPPDAELA 664
Query: 186 -CVPMK-----APGLAQAAVAEETPDWAPE--------LCPSSEARSPE 220
C P AP LA W P LC E PE
Sbjct: 665 ACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPE 713
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 45.8 bits (107), Expect = 4e-05
Identities = 64/203 (31%), Positives = 77/203 (37%), Gaps = 44/203 (21%)
Query: 2 VCGPAVGSYPWSAEPTDAEKRGGARA-KATPPAPRPRPGGFRPPLQRARCYRAAGGRGRE 60
+C PA S W P A + G RA A PP P G RA AA R
Sbjct: 75 LCFPA-RSAAWGP-PARASRAAGRRAGPAGPPCRAPGRG-------RA----AATRRSPA 121
Query: 61 TGNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQP 120
G A+G ++ A A +A RSVPA R LP ++ G S LR+P
Sbjct: 122 PGTARGSPAGVERAGGATAASSAGTRSVPARR-----LPPPCGGTSLGAG---SRALRRP 173
Query: 121 RPAA--RAPEGALASCGLRAGWAGWPPQAAWR-----AWGASVDAAAPPSEAASAEARLP 173
AA R+P + WA P A R W AAPP+ AAS P
Sbjct: 174 GSAALPRSPSSS-------RRWAAMPGPGAPRPGAPGTWPVGFAVAAPPAAAASVAPPPP 226
Query: 174 ERSG-PA-------RRPGPECVP 188
+G PA P P C P
Sbjct: 227 AVAGAPAAAFRGWVAAPDPGCTP 249
Score = 31.2 bits (69), Expect = 0.97
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 23/91 (25%)
Query: 114 SPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLP 173
SPP P +A + E A G +P ++A AWG PP+ A+ A R
Sbjct: 53 SPPTVAPAASAGSQEHPGAG-----GPLCFPARSA--AWG-------PPARASRAAGR-- 96
Query: 174 ERSGPARRPGPECVPMKAPGLAQAAVAEETP 204
R+GPA GP P +APG +AA +P
Sbjct: 97 -RAGPA---GP---PCRAPGRGRAAATRRSP 120
>gi|58218966 hypothetical protein LOC339201 [Homo sapiens]
Length = 193
Score = 45.8 bits (107), Expect = 4e-05
Identities = 48/152 (31%), Positives = 58/152 (38%), Gaps = 15/152 (9%)
Query: 66 GPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAAR 125
GP A Q AAP PA R+ + AP P A + A G P P R PR AA
Sbjct: 3 GPPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWAC--GPPHWGPQRGPRNAAA 60
Query: 126 APEG-----------ALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAA--SAEARL 172
A G A +C G PP A G + P + SA++R
Sbjct: 61 ARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRP 120
Query: 173 PERSGPARRPGPECVPMKAPGLAQAAVAEETP 204
+GP RR P P APG A A +P
Sbjct: 121 GWCAGPRRRHAPGTEPHVAPGRAPPPRAGASP 152
Score = 35.0 bits (79), Expect = 0.067
Identities = 47/162 (29%), Positives = 55/162 (33%), Gaps = 36/162 (22%)
Query: 5 PAVGSYPWSAEPTD-AEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGN 63
PA S PW+ P +RG A A P PR R RC A G R G+
Sbjct: 36 PAAHS-PWACGPPHWGPQRGPRNAAAARPGPRSR--------WHKRCAAACGACARPPGH 86
Query: 64 --------AQGPRLALQARAAAPAFPAASRRSVPA----PRGRRLLLPGAVAACAVSDGQ 111
A P +A P S +S P PR R PG +
Sbjct: 87 QLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRPGWCAGPRRRHA--PGT---------E 135
Query: 112 PLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWG 153
P P R P P A A G+ G + P A WR WG
Sbjct: 136 PHVAPGRAPPPRAGASPGSRLLPGSPSLLL---PAATWRTWG 174
>gi|239753883 PREDICTED: hypothetical protein [Homo sapiens]
Length = 296
Score = 45.4 bits (106), Expect = 5e-05
Identities = 58/181 (32%), Positives = 69/181 (38%), Gaps = 18/181 (9%)
Query: 50 CYRAAG-GRGRETGNAQGPR---LALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAAC 105
CY G RGR+ G+ PR Q A + A AA+ R A R RR LL A
Sbjct: 64 CYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGR---AQRVRRGLLRWRTTAL 120
Query: 106 AVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEA 165
P P LR+PR L + G RA G + R AS+D A +
Sbjct: 121 G-----PARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGP 175
Query: 166 ASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANR 225
AR R RPG VP PG AA +ET A E SP A R
Sbjct: 176 EDLAARASTRRPRGFRPGLP-VPTAPPGGLAAAAKDETSCAARE-----RGASPRGDAGR 229
Query: 226 L 226
+
Sbjct: 230 V 230
>gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo
sapiens]
Length = 296
Score = 45.4 bits (106), Expect = 5e-05
Identities = 58/181 (32%), Positives = 69/181 (38%), Gaps = 18/181 (9%)
Query: 50 CYRAAG-GRGRETGNAQGPR---LALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAAC 105
CY G RGR+ G+ PR Q A + A AA+ R A R RR LL A
Sbjct: 64 CYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGR---AQRVRRGLLRWRTTAL 120
Query: 106 AVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEA 165
P P LR+PR L + G RA G + R AS+D A +
Sbjct: 121 G-----PARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGP 175
Query: 166 ASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANR 225
AR R RPG VP PG AA +ET A E SP A R
Sbjct: 176 EDLAARASTRRPRGFRPGLP-VPTAPPGGLAAAAKDETSCAARE-----RGASPRGDAGR 229
Query: 226 L 226
+
Sbjct: 230 V 230
>gi|239742378 PREDICTED: hypothetical protein XP_002342507 [Homo
sapiens]
Length = 296
Score = 45.4 bits (106), Expect = 5e-05
Identities = 58/181 (32%), Positives = 69/181 (38%), Gaps = 18/181 (9%)
Query: 50 CYRAAG-GRGRETGNAQGPR---LALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAAC 105
CY G RGR+ G+ PR Q A + A AA+ R A R RR LL A
Sbjct: 64 CYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGR---AQRVRRGLLRWRTTAL 120
Query: 106 AVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEA 165
P P LR+PR L + G RA G + R AS+D A +
Sbjct: 121 G-----PARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGP 175
Query: 166 ASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANR 225
AR R RPG VP PG AA +ET A E SP A R
Sbjct: 176 EDLAARASTRRPRGFRPGLP-VPTAPPGGLAAAAKDETSCAARE-----RGASPRGDAGR 229
Query: 226 L 226
+
Sbjct: 230 V 230
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 45.1 bits (105), Expect = 6e-05
Identities = 66/245 (26%), Positives = 85/245 (34%), Gaps = 32/245 (13%)
Query: 4 GPAVGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGN 63
GP + S P G R + PPA PG P RA+G
Sbjct: 78 GPTRSAGTSSRNPASRPPASG-RGERAPPAKNTSPGPVSSP------GRASGTTRPGPLG 130
Query: 64 AQGPRLALQ---ARAAAPAFPAASRRSVPAPRGRRLLLPGAVA--------ACAVSDGQP 112
+G R++ + AR A P S S A R PG + A G P
Sbjct: 131 QKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLP 190
Query: 113 LSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEA-- 170
P +PRP P +++S + P AA R A P S + S+ A
Sbjct: 191 RPAPSARPRPPTEGPRKSVSSASEHS--TTEPSPAARRRPSAGGGLQRPASRSLSSSATP 248
Query: 171 -RLPERSGPARRPGPEC----VPMKAPGLAQAAVAEETP---DWAPELCP--SSEARSPE 220
P RSGP+ R P K GL + TP D AP L P SS +P
Sbjct: 249 LSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPS 308
Query: 221 PPANR 225
P +
Sbjct: 309 PSGTK 313
Score = 42.4 bits (98), Expect = 4e-04
Identities = 56/210 (26%), Positives = 74/210 (35%), Gaps = 27/210 (12%)
Query: 5 PAVGSYPWSAEPTDAEKRGGARAKATPPAP----RPRPGGFRPPLQRARCYRAAGGRGRE 60
PA S SA P + R G A+ TP AP +P+P G LQ R + R ++
Sbjct: 237 PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKG----LQALRPPQVTPPR-KD 291
Query: 61 TGNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQP 120
A GP + A P+ R VP P LP + P SPPL P
Sbjct: 292 AAPALGP--LSSSPLATPSPSGTKARPVPPPDNAATPLPATL---------PPSPPLATP 340
Query: 121 RPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPAR 180
P A A S PP A PP +A + +P P
Sbjct: 341 LPLAPPSPSAPPSLQTLPSPPATPPSQ------APPSMTTPPMQAPPSLQTIPPIQVPHS 394
Query: 181 RPGPECVPMKAPGLAQAAVAEETPDWAPEL 210
P +P LA +++ T +P L
Sbjct: 395 LTSPSLQAPPSP-LALSSLQATTSLGSPTL 423
Score = 37.4 bits (85), Expect = 0.014
Identities = 58/201 (28%), Positives = 75/201 (37%), Gaps = 41/201 (20%)
Query: 29 ATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLA----LQARAAAPAFPAAS 84
ATPP P+ P PPLQ + T Q P LQA + PA P S
Sbjct: 588 ATPP-PQAPPALASPPLQGLPSPPLSP---LATPPPQAPPXLALPPLQAPPSPPASPPLS 643
Query: 85 RRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWP 144
+ P+P+ P A+A + P SPP P P +AP AS P
Sbjct: 644 PLATPSPQA-----PNALAVHLLQ--APFSPP---PSPPVQAPFSPPAS----------P 683
Query: 145 PQAAWRAWGASVDAAAPPSEAASAEARLPER---SGPARRP-GPECVPMKAPGLAQAAVA 200
P + +A PPS+A + A P + S PA P P P AA
Sbjct: 684 PVSP---------SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPP 734
Query: 201 EETPDWAPELCPSSEARSPEP 221
+ P P P S + +P P
Sbjct: 735 LQVPPSPPASPPMSPSATPPP 755
Score = 33.9 bits (76), Expect = 0.15
Identities = 54/216 (25%), Positives = 68/216 (31%), Gaps = 23/216 (10%)
Query: 5 PAVGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNA 64
PA+ + P A P+ G +A +P A P PP Q A
Sbjct: 790 PALATPPLQALPSPPASFPG-QAPFSPSASLPMSPLATPPPQAPPVLAAP---------- 838
Query: 65 QGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAA 124
LQ + PA P P G + G A++ G P PP R P
Sbjct: 839 -----LLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPP-PPPSRSPSSTL 892
Query: 125 RAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGP 184
P+ A G + P + G AAA P A A P + +R P P
Sbjct: 893 SGPDLA----GHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHP--AAWSRGPAP 946
Query: 185 ECVPMKAPGLAQAAVAEETPDWAPELCPSSEARSPE 220
APG P A LC E PE
Sbjct: 947 PLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPE 982
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 45.1 bits (105), Expect = 6e-05
Identities = 66/242 (27%), Positives = 82/242 (33%), Gaps = 37/242 (15%)
Query: 5 PAVGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNA 64
P G S P AK T P P PG RA+G
Sbjct: 75 PRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPG------------RASGTTRPGPLGQ 122
Query: 65 QGPRLALQ---ARAAAPAFPAASRRSVPAPRGRRLLLPGAVA--------ACAVSDGQPL 113
+G R++ + AR A P S S A R PG + A G P
Sbjct: 123 KGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPR 182
Query: 114 SPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEA--- 170
P +PRP P +++S + P AA R A P S + S+ A
Sbjct: 183 PAPSARPRPPTEGPRKSVSSASEHS--TTEPSPAARRRPSAGGGLQRPASRSLSSSATPL 240
Query: 171 RLPERSGPARRPGPEC----VPMKAPGLAQAAVAEETP---DWAPELCP--SSEARSPEP 221
P RSGP+ R P K GL + TP D AP L P SS +P P
Sbjct: 241 SSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSP 300
Query: 222 PA 223
A
Sbjct: 301 SA 302
Score = 40.4 bits (93), Expect = 0.002
Identities = 62/236 (26%), Positives = 83/236 (35%), Gaps = 46/236 (19%)
Query: 5 PAVGSYPWSAEPTDAEKRGGARAKATPPAP----RPRPGGFRPPLQRARCYRAAGGRGRE 60
PA S SA P + R G A+ TP AP +P+P G LQ R
Sbjct: 228 PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKG----LQALR----------- 272
Query: 61 TGNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQP 120
P++ + AAPA S + P P A + P +PP +
Sbjct: 273 -----PPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQAT 327
Query: 121 ----RPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERS 176
P +A L S L + A PPQ A A PP +A + P S
Sbjct: 328 TSLGSPTLQATHSFLPSPPL-SPLATPPPQ-------APPALALPPLQAPPSPPASPPLS 379
Query: 177 GPARRPGPECVPMKAPGLAQA---------AVAEETPDWAPELCPSSEARSPEPPA 223
P P P+ A L QA A +P +P + PS+ S PP+
Sbjct: 380 -PLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPS 434
Score = 34.3 bits (77), Expect = 0.11
Identities = 65/229 (28%), Positives = 81/229 (35%), Gaps = 47/229 (20%)
Query: 29 ATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARAA-----APAFPAA 83
ATPP P P PPLQ A+ A A P AL + A AP P+A
Sbjct: 456 ATPPPQAPPPLA-APPLQLAKPPPQA-----PPALATPPLQALPSPPASFPGQAPFSPSA 509
Query: 84 SRR----SVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPR-PAARAPEGALASCGLRA 138
S + P P+ +L A V P SP L+ PR P P+ +++ L
Sbjct: 510 SLPMSPLATPPPQAPPVL---AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTL 566
Query: 139 GWAGWPPQAAWRAWGASV---DAAAPPSEAASAEARL------PERSGPARRPGPE---- 185
A PP R+ +++ D A S A S L PE G A P P+
Sbjct: 567 ALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPE-GGAAASPPPDAELA 625
Query: 186 -CVPMK-----APGLAQAAVAEETPDWAPE--------LCPSSEARSPE 220
C P AP LA W P LC E PE
Sbjct: 626 ACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPE 674
>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 45.1 bits (105), Expect = 6e-05
Identities = 56/187 (29%), Positives = 68/187 (36%), Gaps = 53/187 (28%)
Query: 7 VGSYP-WSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQ 65
+G P W E R G AT RP PG R +AR R G R R A+
Sbjct: 19 IGVQPGWGGEEVQGLARAGL---ATGKGQRP-PGPGRVRAAQARARRGGGARERPAEGAR 74
Query: 66 GPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQP----R 121
GPR A AAP P++ APRG P P LR+P R
Sbjct: 75 GPRAARGGARAAP-MPSS------APRG------------------PTEPALRRPSSAER 109
Query: 122 PAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARR 181
P A+AP + AS G G A A PS ++ A + R G RR
Sbjct: 110 PLAQAPSSS-ASVGRAPG------------------AMASPSRSSEATGKPRGRDGRPRR 150
Query: 182 PGPECVP 188
+ P
Sbjct: 151 EEDDVPP 157
>gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens]
Length = 562
Score = 45.1 bits (105), Expect = 6e-05
Identities = 63/208 (30%), Positives = 81/208 (38%), Gaps = 23/208 (11%)
Query: 10 YPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRG--------RET 61
+P SA E A A A+ P P P P PP R R+AGG RE
Sbjct: 54 HPESAGEHALEPPAPAGASASTPPP-PAPEAQLPPFPRELAGRSAGGSSPEGGEDSDRED 112
Query: 62 GNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPR 121
GN P + + ++ FP + +S G RL P + A S G P P Q R
Sbjct: 113 GN-YCPPVKRERTSSLTQFPPS--QSEERSSGFRLKPPTLIHGQAPSAGLPSQKPKEQQR 169
Query: 122 PAAR-----APE-GALASCGLRAGWAG--WPPQAAWRAWGASVDAAA--PPSEAASAEAR 171
R AP+ AL+ +G G P AS D AA PSEAA E +
Sbjct: 170 SVLRPAVLQAPQPKALSQTVPSSGTNGVSLPADCTGAVPAASPDTAAWRSPSEAAD-EEK 228
Query: 172 LPERSGPARRPGPECVPMKAPGLAQAAV 199
P+++ + E K P QA V
Sbjct: 229 EPQKNESSNASEEEACEKKDPATQQAFV 256
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 44.7 bits (104), Expect = 8e-05
Identities = 53/172 (30%), Positives = 63/172 (36%), Gaps = 17/172 (9%)
Query: 53 AAGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQP 112
AAG G + P A A AAPA A P P GR PG P
Sbjct: 54 AAGALGNHVVSGS-PAGAAGAGPAAPAEGAPGAAPEPPPAGRAR--PGGGGPQRPGPPSP 110
Query: 113 LSP--PLRQPRPAARA---PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAAS 167
P P PAA+ PEG+ SC P AA A A P++ A
Sbjct: 111 RRPLVPAGPAPPAAKLRPPPEGSAGSCA--------PVPAAAAVAAGPEPAPAGPAKPAG 162
Query: 168 AEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEARSP 219
A L R+GP PGP P PG A +T + + L S A +P
Sbjct: 163 PAA-LAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAP 213
Score = 43.5 bits (101), Expect = 2e-04
Identities = 67/237 (28%), Positives = 83/237 (35%), Gaps = 40/237 (16%)
Query: 6 AVGSYPWSAEPTDAEKRGGAR--------AKATPPAPRPRPGGFRPPLQRARCYRAAGGR 57
A+G++ S P A G A A PPA R RP GG
Sbjct: 57 ALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARP----------------GGG 100
Query: 58 GRETGNAQGPRLALQARAAAPAFPAASRRSVP-APRGRRLLLPGAVAACAVSDGQPLSP- 115
G + PR L A PA PAA R P G +P A A A + P P
Sbjct: 101 GPQRPGPPSPRRPLV--PAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPA 158
Query: 116 -PLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPE 174
P AARA G G G P A + AA S A+A A
Sbjct: 159 KPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLV 218
Query: 175 RSGPAR-----RPGPECVPMKAPGLAQAAV----AEETPDWAPELCPSSEARSPEPP 222
+GPA +P ++ P AA A +P AP P++ A +P PP
Sbjct: 219 NNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAP--APAAPAAAPPPP 273
Score = 42.4 bits (98), Expect = 4e-04
Identities = 65/213 (30%), Positives = 77/213 (36%), Gaps = 53/213 (24%)
Query: 62 GNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPR 121
G A P A + AAPA PAA + P P P A A A G P PP P
Sbjct: 245 GAAAPPAPAAPSPPAAPA-PAAPAAAPPPP-------PPAPATLARPPGHPAGPPTAAPA 296
Query: 122 ---PAARAPEGALASCGLRAGWAGWP--------PQAAWRAWGASVDAAAPPS--EAASA 168
PAA G+ + A AG P P AA A V A +P +AA
Sbjct: 297 VPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPP 356
Query: 169 EARLPERSGPARR--------------PGPECVPMKAPGL-------AQAAVAEE----- 202
A+ SGPA P P VP APG A AV +
Sbjct: 357 AAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTP 416
Query: 203 ---TPDWAPELCPSSEA-RSPEPPAN--RLQDF 229
T L P+ A R P+PP N +Q+F
Sbjct: 417 TATTSGIRATLTPTVLAPRLPQPPQNPTNIQNF 449
Score = 37.0 bits (84), Expect = 0.018
Identities = 68/258 (26%), Positives = 80/258 (31%), Gaps = 56/258 (21%)
Query: 6 AVGSYPWSAEPTDAEKRGGARAKATP-----PAPRPRPGGFRPPLQRARCYRAAGGRGRE 60
A G P A P A+A P P P P PG +P AG +
Sbjct: 147 AAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKP----------AGPGAAQ 196
Query: 61 TGNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQP 120
T N L AAAPA + L LP A V P P
Sbjct: 197 TLNGSAALLNSH-HAAAPAVSLVNNGPAAL-----LPLPKPAAPGTVIQTPPFVGAAAPP 250
Query: 121 RPAARAPEGALASCGLRA----------------GWAGWPPQA-------AWRAWGASVD 157
PAA +P A A A G PP A A G S
Sbjct: 251 APAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAG 310
Query: 158 AAAPPSEAASAEARLPERSGP-----ARRPG-----PECVPMKAPGLAQAAVAEETPDWA 207
AA P+ AA A + + GP A PG P+ V AP AQ A A
Sbjct: 311 AAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTA 370
Query: 208 PELC--PSSEARSPEPPA 223
+ P+ + P P A
Sbjct: 371 ASMVIGPTMQGALPSPAA 388
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 44.7 bits (104), Expect = 8e-05
Identities = 46/147 (31%), Positives = 55/147 (37%), Gaps = 7/147 (4%)
Query: 5 PAVGSYPWSAEPTDAEKRGGARAKATPPAPR----PRPGGFRPPLQRARCYRAAGGRGRE 60
P G+ P + A A A PP P P P P + R AA
Sbjct: 102 PRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPS 161
Query: 61 TGNAQ-GPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPL-- 117
G AQ GPR A AAP A+ +V P G R P AVAA P PP
Sbjct: 162 PGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPP 221
Query: 118 RQPRPAARAPEGALASCGLRAGWAGWP 144
+Q +P P+ +RAG A P
Sbjct: 222 QQQQPPPPQPQPPPEGGAVRAGGAARP 248
Score = 44.3 bits (103), Expect = 1e-04
Identities = 45/118 (38%), Positives = 52/118 (44%), Gaps = 20/118 (16%)
Query: 113 LSPPLRQPRPAA--RAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPS--EAASA 168
+ PP R P A RAP GA A+ A A PP A A V AAAP AA+A
Sbjct: 99 VQPPRRGATPPAPPRAPRGAPAA----AAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAA 154
Query: 169 EARLPERSGPARRPGPEC---VPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPA 223
A P GPA+ PGP P+ AP A AA P + P + R PPA
Sbjct: 155 AATAPPSPGPAQ-PGPRAQRAAPLAAPPPAPAA--------PPAVAPPAGPRRAPPPA 203
Score = 43.9 bits (102), Expect = 1e-04
Identities = 51/167 (30%), Positives = 60/167 (35%), Gaps = 36/167 (21%)
Query: 59 RETGNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLR 118
R Q PR R A P P + R PA AA A P PP
Sbjct: 94 RNAARVQPPR-----RGATPPAPPRAPRGAPA-----------AAAAAAPPPTPAPPPPP 137
Query: 119 QPRPAA---RAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPER 175
P AA RAP A A+ A + P Q RA A+ AA PP+ AA P
Sbjct: 138 APVAAAAPARAPRAAAAAA--TAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPP-- 193
Query: 176 SGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPP 222
+GP R P P AVA P P P + + +PP
Sbjct: 194 AGPRRAPPP-------------AVAAREPPLPPPPQPPAPPQQQQPP 227
>gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 44.3 bits (103), Expect = 1e-04
Identities = 67/258 (25%), Positives = 87/258 (33%), Gaps = 49/258 (18%)
Query: 11 PWSAEPTDAEKRGGARAKATP---------PAPRPRPGGFRPPLQRARCYRA-------- 53
P A P +R G+R + TP P PRP PP R+R Y
Sbjct: 302 PRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASS 361
Query: 54 -----AGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPAPR--GRRLLLPGAVAACA 106
G R +TG GPR +R PA+ RR PA R R L G
Sbjct: 362 AQSGPLGTRSDDTGT--GPRRERPSRRLTTGTPASPRRP-PALRSQSRDRLDRGRPRGAP 418
Query: 107 VSDGQPLS--PPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSE 164
G LS P R+ R +R + L R G W P+ + G+ P
Sbjct: 419 GGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGR-GSGGSGRSTPQTPRA 477
Query: 165 AASAEARLPERSGPARRPG--PECV-----------------PMKAPGLAQAAVAEETPD 205
+ A RL S P+ G P + ++ LA A E
Sbjct: 478 RSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVAS 537
Query: 206 WAPELCPSSEARSPEPPA 223
P AR+P+PPA
Sbjct: 538 VTPTGPAPDPARAPDPPA 555
Score = 33.9 bits (76), Expect = 0.15
Identities = 53/207 (25%), Positives = 69/207 (33%), Gaps = 43/207 (20%)
Query: 52 RAAGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPAPR------------------- 92
R +GG GR T Q PR A +PA P SR S P+P
Sbjct: 462 RGSGGSGRST--PQTPR------ARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQ 513
Query: 93 ----GRRL---LLPGAVAACAVSDGQPLSP---PLRQPRPAAR-----APEGALASCGLR 137
RRL L A A AV+ P P P R P P A + + +S +
Sbjct: 514 EQQLFRRLEEEFLANARALEAVASVTPTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVL 573
Query: 138 AGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQA 197
G G P + A G + S ++ + P GP PG +
Sbjct: 574 GGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWAR 633
Query: 198 AVAEETPDWAPELCPSSEA-RSPEPPA 223
+ PD P P+ R P PA
Sbjct: 634 GRMDTQPDRKPSRIPTPRGPRRPSGPA 660
>gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 44.3 bits (103), Expect = 1e-04
Identities = 67/258 (25%), Positives = 87/258 (33%), Gaps = 49/258 (18%)
Query: 11 PWSAEPTDAEKRGGARAKATP---------PAPRPRPGGFRPPLQRARCYRA-------- 53
P A P +R G+R + TP P PRP PP R+R Y
Sbjct: 302 PRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASS 361
Query: 54 -----AGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPAPR--GRRLLLPGAVAACA 106
G R +TG GPR +R PA+ RR PA R R L G
Sbjct: 362 AQSGPLGTRSDDTGT--GPRRERPSRRLTTGTPASPRRP-PALRSQSRDRLDRGRPRGAP 418
Query: 107 VSDGQPLS--PPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSE 164
G LS P R+ R +R + L R G W P+ + G+ P
Sbjct: 419 GGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGR-GSGGSGRSTPQTPRA 477
Query: 165 AASAEARLPERSGPARRPG--PECV-----------------PMKAPGLAQAAVAEETPD 205
+ A RL S P+ G P + ++ LA A E
Sbjct: 478 RSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVAS 537
Query: 206 WAPELCPSSEARSPEPPA 223
P AR+P+PPA
Sbjct: 538 VTPTGPAPDPARAPDPPA 555
Score = 33.9 bits (76), Expect = 0.15
Identities = 53/207 (25%), Positives = 69/207 (33%), Gaps = 43/207 (20%)
Query: 52 RAAGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPAPR------------------- 92
R +GG GR T Q PR A +PA P SR S P+P
Sbjct: 462 RGSGGSGRST--PQTPR------ARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQ 513
Query: 93 ----GRRL---LLPGAVAACAVSDGQPLSP---PLRQPRPAAR-----APEGALASCGLR 137
RRL L A A AV+ P P P R P P A + + +S +
Sbjct: 514 EQQLFRRLEEEFLANARALEAVASVTPTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVL 573
Query: 138 AGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQA 197
G G P + A G + S ++ + P GP PG +
Sbjct: 574 GGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWAR 633
Query: 198 AVAEETPDWAPELCPSSEA-RSPEPPA 223
+ PD P P+ R P PA
Sbjct: 634 GRMDTQPDRKPSRIPTPRGPRRPSGPA 660
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 44.3 bits (103), Expect = 1e-04
Identities = 58/219 (26%), Positives = 85/219 (38%), Gaps = 26/219 (11%)
Query: 14 AEPTDAEKRGGARAKATPPAP-RPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQ 72
+ P+ + A A TPPA + P P + R RAAGG GR + R + +
Sbjct: 339 SSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRS-R 397
Query: 73 ARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALA 132
+ A+AP R PRG L A ++ G+ P P P + G
Sbjct: 398 SSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGP--GPEPGSERGHG--- 452
Query: 133 SCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGP---ECVPM 189
G RA PP+A A+ PS A PE +R PGP
Sbjct: 453 GHGKRA--KERPPRAR--------PASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSS 502
Query: 190 KAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQD 228
++P +++ AE+ P S + SP+ P +R +D
Sbjct: 503 RSPSKSRSRSAEKRPH------SPSRSPSPKKPLSRDKD 535
>gi|6466466 RAN binding protein 3 isoform RANBP3-d [Homo sapiens]
Length = 567
Score = 43.9 bits (102), Expect = 1e-04
Identities = 63/212 (29%), Positives = 82/212 (38%), Gaps = 26/212 (12%)
Query: 10 YPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRG--------RET 61
+P SA E A A A+ P P P P PP R R+AGG RE
Sbjct: 54 HPESAGEHALEPPAPAGASASTPPP-PAPEAQLPPFPRELAGRSAGGSSPEGGEDSDRED 112
Query: 62 GNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPR 121
GN P + + ++ FP + +S G RL P + A S G P P Q R
Sbjct: 113 GN-YCPPVKRERTSSLTQFPPS--QSEERSSGFRLKPPTLIHGQAPSAGLPSQKPKEQQR 169
Query: 122 PAAR-----APE-GALASCGLRAGWAG--WPPQAAWRAWGASVDAAA--PPSEAA----S 167
R AP+ AL+ +G G P AS D AA PSEAA +
Sbjct: 170 SVLRPAVLQAPQPKALSQTVPSSGTNGVSLPADCTGAVPAASPDTAAWRSPSEAADEVCA 229
Query: 168 AEARLPERSGPARRPGPECVPMKAPGLAQAAV 199
E + P+++ + E K P QA V
Sbjct: 230 LEEKEPQKNESSNASEEEACEKKDPATQQAFV 261
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 43.9 bits (102), Expect = 1e-04
Identities = 41/146 (28%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 5 PAVGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNA 64
P + S P G ++P AP P P +P Q A AAGG+ G
Sbjct: 359 PTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPS--QPQSQAAAAGAAAGGQQAAAGMG 416
Query: 65 QGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVA-ACAVSDGQPLSP-------- 115
G + Q AA+PA+ AA +RS PA + PG S G P+ P
Sbjct: 417 LGKDMGAQYAAASPAWAAAQQRSHPA------MSPGTPGPTMGRSQGSPMDPMVMKRPQL 470
Query: 116 ------PLRQPRPAARAPEGALASCG 135
P QP+ ++ P G+ G
Sbjct: 471 YGMGSNPHSQPQQSSPYPGGSYGPPG 496
Score = 32.0 bits (71), Expect = 0.57
Identities = 39/145 (26%), Positives = 47/145 (32%), Gaps = 24/145 (16%)
Query: 39 GGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLL 98
GG L +A AAGG R G Q P A P+ RS
Sbjct: 326 GGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSY---------- 375
Query: 99 PGAVAACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDA 158
P +PP P P+ A+ G AG Q A G D
Sbjct: 376 ----GGSYPEYSSPSAPP-----PPPSQPQSQAAAAGAAAGG-----QQAAAGMGLGKDM 421
Query: 159 AAPPSEAASAEARLPERSGPARRPG 183
A + A+ A A +RS PA PG
Sbjct: 422 GAQYAAASPAWAAAQQRSHPAMSPG 446
>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
[Homo sapiens]
Length = 1008
Score = 43.9 bits (102), Expect = 1e-04
Identities = 73/274 (26%), Positives = 108/274 (39%), Gaps = 39/274 (14%)
Query: 6 AVGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQ 65
+ GS S+E + E G ++ P PR G P + A GG+G + +
Sbjct: 468 SAGSRKTSSEKVNPESSGKTNPVSSGPGD-PRSLGTAGPPSAVKAEPATGGKGDPLSSEK 526
Query: 66 GPRLA---LQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQ-PR 121
+A A+ A P A + P +G+ P +VS G+ +S P + P
Sbjct: 527 AGLVASGKAAPTASGKAEPLAVGKEDPVSKGKADAGPSGQGD-SVSIGKVVSTPGKTVPV 585
Query: 122 PAARA-----------PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEA 170
P+ + PEG + S L G +A RA G A P AE
Sbjct: 586 PSGKVDPVSLGKAEAIPEGKVGSLPLEKGSPVTTTKADPRASGK-----AQPQSGGKAET 640
Query: 171 RLPERSGPARRPGPECVPMKAPGLAQA-AVAEETPDWAPELCPSSEARSPEPPANRLQDF 229
+LP + G A APG A A + +ETP + ++ P S R EP A+ +
Sbjct: 641 KLPGQEGAA-----------APGEAGAVCLKKETPQASEKVDPGS-CRKAEPLASGKGE- 687
Query: 230 DTLVTVGKQLEAICVKVTSGETKGQERPTSLLAT 263
V++GK A K T + G+ P SL T
Sbjct: 688 --PVSLGKADSAPSRK-TESPSLGKVVPLSLEKT 718
Score = 34.7 bits (78), Expect = 0.088
Identities = 54/236 (22%), Positives = 72/236 (30%), Gaps = 68/236 (28%)
Query: 15 EPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRA-----------------RCYRAAGGR 57
E AE+ A A PP PR R + P A C A
Sbjct: 769 EAAGAERSPCPEAAAPPPGPRTRDNFTKAPSWEASAPPPPREDAGTQAGAQACVSVAVSP 828
Query: 58 GRETGNAQGPRLALQARAAAPAFP------------AASRRSV-PAPRGRRLLLPGAVAA 104
A G + QA AP+ P AA RSV P + P A
Sbjct: 829 MSPQDGAGGSAFSFQAAPRAPSPPSRRDAGLQVSLGAAETRSVATGPMTPQAAAPPAFPE 888
Query: 105 CAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVD------- 157
V G L+ + P PA + + G+ W +GA+++
Sbjct: 889 VRVRPGSALAAAVAPPEPAEPVRDVSWDEKGM-----------TWEVYGAAMEVEVLGMA 937
Query: 158 ----------------AAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQA 197
A APP A + P RSG R P+ + PGL +A
Sbjct: 938 IQKHLERQIEEHGRQGAPAPPPAARAG----PGRSGSVRTAPPDGAAKRPPGLFRA 989
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,188,703
Number of Sequences: 37866
Number of extensions: 905221
Number of successful extensions: 6769
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 965
Number of HSP's that attempted gapping in prelim test: 5264
Number of HSP's gapped (non-prelim): 2157
length of query: 264
length of database: 18,247,518
effective HSP length: 100
effective length of query: 164
effective length of database: 14,460,918
effective search space: 2371590552
effective search space used: 2371590552
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.