Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239757688
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757688 PREDICTED: similar to POM121-like 1, partial [Homo
sapiens]
(346 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757688 PREDICTED: similar to POM121-like 1, partial [Homo ... 699 0.0
gi|239742514 PREDICTED: similar to Putative POM121-like protein ... 510 e-145
gi|239742580 PREDICTED: similar to Putative POM121-like protein ... 504 e-143
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens] 151 7e-37
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens] 150 2e-36
gi|239754624 PREDICTED: similar to hCG1998564 [Homo sapiens] 145 7e-35
gi|253683544 POM121 membrane glycoprotein-like 2 [Homo sapiens] 101 9e-22
gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo ... 88 1e-17
gi|112421134 hypothetical protein LOC23742 [Homo sapiens] 62 1e-09
gi|239735603 POM121 membrane glycoprotein-like 12 [Homo sapiens] 47 2e-05
gi|239756026 PREDICTED: UPF0607 protein ENSP00000383144-like [Ho... 41 0.001
gi|239750549 PREDICTED: UPF0607 protein ENSP00000383144-like [Ho... 41 0.001
gi|239744846 PREDICTED: UPF0607 protein ENSP00000383144-like [Ho... 41 0.001
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 41 0.002
gi|169173209 PREDICTED: hypothetical protein [Homo sapiens] 40 0.003
gi|169172420 PREDICTED: UPF0607 protein ENSP00000382826-like [Ho... 40 0.003
gi|169172709 PREDICTED: UPF0607 protein ENSP00000382826-like [Ho... 40 0.003
gi|148612857 sickle tail isoform 3 [Homo sapiens] 39 0.005
gi|148612813 sickle tail isoform 2 [Homo sapiens] 39 0.005
gi|169205253 PREDICTED: hypothetical protein [Homo sapiens] 39 0.007
gi|239756593 PREDICTED: UPF0607 protein ENSP00000381418-like [Ho... 37 0.020
gi|113426467 PREDICTED: UPF0607 protein ENSP00000381418-like [Ho... 37 0.020
gi|113426153 PREDICTED: UPF0607 protein ENSP00000381418-like [Ho... 37 0.020
gi|239755085 PREDICTED: hypothetical protein [Homo sapiens] 37 0.026
gi|239752908 PREDICTED: UPF0607 protein ENSP00000383783-like [Ho... 37 0.026
gi|239747457 PREDICTED: UPF0607 protein ENSP00000383783-like [Ho... 37 0.026
gi|169176429 PREDICTED: hypothetical protein [Homo sapiens] 37 0.026
gi|239741331 PREDICTED: UPF0607 protein ENSP00000383783-like [Ho... 37 0.026
gi|66529407 tensin [Homo sapiens] 35 0.099
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 35 0.099
>gi|239757688 PREDICTED: similar to POM121-like 1, partial [Homo
sapiens]
Length = 346
Score = 699 bits (1804), Expect = 0.0
Identities = 346/346 (100%), Positives = 346/346 (100%)
Query: 1 MDSLWGPGAGSHPFGVHNTRLSPDLCPGKIVLRALKESGAGMPEQDKDPRVQENPGDQRR 60
MDSLWGPGAGSHPFGVHNTRLSPDLCPGKIVLRALKESGAGMPEQDKDPRVQENPGDQRR
Sbjct: 1 MDSLWGPGAGSHPFGVHNTRLSPDLCPGKIVLRALKESGAGMPEQDKDPRVQENPGDQRR 60
Query: 61 VPEVTGDAPSAFRPLRDNGGLSPFVPRPGPLQTDLHAQRSEIRYNQTSQTSWTSSCTNRN 120
VPEVTGDAPSAFRPLRDNGGLSPFVPRPGPLQTDLHAQRSEIRYNQTSQTSWTSSCTNRN
Sbjct: 61 VPEVTGDAPSAFRPLRDNGGLSPFVPRPGPLQTDLHAQRSEIRYNQTSQTSWTSSCTNRN 120
Query: 121 AISSSYSSTGGLPGLKRRRGPASSHCQLTLSSSKTVSEDRPQAVSSGHTQCEKAADIAPG 180
AISSSYSSTGGLPGLKRRRGPASSHCQLTLSSSKTVSEDRPQAVSSGHTQCEKAADIAPG
Sbjct: 121 AISSSYSSTGGLPGLKRRRGPASSHCQLTLSSSKTVSEDRPQAVSSGHTQCEKAADIAPG 180
Query: 181 QTLTLRNDSSTSEASRPSTHKFPLLPRRRGEPLMLPPPLELGYRVTVEDLDREKEAAFQR 240
QTLTLRNDSSTSEASRPSTHKFPLLPRRRGEPLMLPPPLELGYRVTVEDLDREKEAAFQR
Sbjct: 181 QTLTLRNDSSTSEASRPSTHKFPLLPRRRGEPLMLPPPLELGYRVTVEDLDREKEAAFQR 240
Query: 241 INSALQVEDKAISDCRPSWPSHTLSSLATGASGLPAVSKASSMDAQQETHKSQDCLGLLA 300
INSALQVEDKAISDCRPSWPSHTLSSLATGASGLPAVSKASSMDAQQETHKSQDCLGLLA
Sbjct: 241 INSALQVEDKAISDCRPSWPSHTLSSLATGASGLPAVSKASSMDAQQETHKSQDCLGLLA 300
Query: 301 PLASAAEVPSTAPVSGKKHRPPGPLFSSSDPLPATSSDSQDSAQVT 346
PLASAAEVPSTAPVSGKKHRPPGPLFSSSDPLPATSSDSQDSAQVT
Sbjct: 301 PLASAAEVPSTAPVSGKKHRPPGPLFSSSDPLPATSSDSQDSAQVT 346
>gi|239742514 PREDICTED: similar to Putative POM121-like protein
1-like [Homo sapiens]
Length = 896
Score = 510 bits (1313), Expect = e-145
Identities = 261/305 (85%), Positives = 270/305 (88%)
Query: 42 MPEQDKDPRVQENPGDQRRVPEVTGDAPSAFRPLRDNGGLSPFVPRPGPLQTDLHAQRSE 101
MPEQDKDPRVQENP D R VPEVTGDA SAF PLRDNGGLSPFVPRPGPLQTDLHAQ SE
Sbjct: 1 MPEQDKDPRVQENPDDHRTVPEVTGDARSAFWPLRDNGGLSPFVPRPGPLQTDLHAQSSE 60
Query: 102 IRYNQTSQTSWTSSCTNRNAISSSYSSTGGLPGLKRRRGPASSHCQLTLSSSKTVSEDRP 161
IRYNQTSQTSWTSS T RNAISSSYSSTGGLPGLK+RRGPASS CQLTLS SKTVSEDRP
Sbjct: 61 IRYNQTSQTSWTSSSTKRNAISSSYSSTGGLPGLKQRRGPASSRCQLTLSYSKTVSEDRP 120
Query: 162 QAVSSGHTQCEKAADIAPGQTLTLRNDSSTSEASRPSTHKFPLLPRRRGEPLMLPPPLEL 221
QAVSSGHT+CEKAAD APGQTL R S S+ASRP K PLLP RRGEPLM+PPPLEL
Sbjct: 121 QAVSSGHTRCEKAADTAPGQTLAPRGGSPRSQASRPRRRKIPLLPSRRGEPLMMPPPLEL 180
Query: 222 GYRVTVEDLDREKEAAFQRINSALQVEDKAISDCRPSWPSHTLSSLATGASGLPAVSKAS 281
GYRVT EDL EK+AAFQRINSAL VEDKAISDCRPS PSHTLSSLATGASG P VSKA
Sbjct: 181 GYRVTAEDLHLEKQAAFQRINSALHVEDKAISDCRPSRPSHTLSSLATGASGGPPVSKAP 240
Query: 282 SMDAQQETHKSQDCLGLLAPLASAAEVPSTAPVSGKKHRPPGPLFSSSDPLPATSSDSQD 341
+MDAQQ+ KSQDCLGL+APLASAAEV STAPVSGKK RPPGPLFSSSDPLPATSS S+D
Sbjct: 241 TMDAQQDRPKSQDCLGLVAPLASAAEVSSTAPVSGKKQRPPGPLFSSSDPLPATSSHSRD 300
Query: 342 SAQVT 346
SAQVT
Sbjct: 301 SAQVT 305
Score = 303 bits (775), Expect = 2e-82
Identities = 170/250 (68%), Positives = 178/250 (71%), Gaps = 42/250 (16%)
Query: 97 AQRSEIRYNQTSQTSWTSSCTNRNAISSSYSSTGGLPGLKRRRGPASSHCQLTLSSSKTV 156
AQRSE+RYNQ SQ S T SC RNA SSS+SST GLP LKRRRGPASSHCQL SSSKTV
Sbjct: 368 AQRSEVRYNQRSQISRTRSCLKRNASSSSHSSTEGLPELKRRRGPASSHCQLAHSSSKTV 427
Query: 157 SEDRPQAVSSGHTQCEKAADIAPGQTLTLRNDSSTSEASRPSTHKFPLLPRRRGEPLMLP 216
SED PQAVSSGHT+CEK AD APGQTL R S S+ASRP
Sbjct: 428 SEDGPQAVSSGHTRCEKRADTAPGQTLAPRGGSPRSQASRP------------------- 468
Query: 217 PPLELGYRVTVEDLDREKEAAFQRINSALQVEDKAISDCRPSWPSHTLSSLATGASGLPA 276
INSAL VEDKAISDCRPS PSHTLSSLATGAS P
Sbjct: 469 -----------------------HINSALHVEDKAISDCRPSRPSHTLSSLATGASRGPP 505
Query: 277 VSKASSMDAQQETHKSQDCLGLLAPLASAAEVPSTAPVSGKKHRPPGPLFSSSDPLPATS 336
VSKA +MDAQQ+ KSQDCLGLLAPLASAAE+PSTAPVSGKKHRPPGPLFSSSDPLPATS
Sbjct: 506 VSKAPTMDAQQDRPKSQDCLGLLAPLASAAELPSTAPVSGKKHRPPGPLFSSSDPLPATS 565
Query: 337 SDSQDSAQVT 346
S S+DSAQVT
Sbjct: 566 SHSRDSAQVT 575
Score = 287 bits (735), Expect = 8e-78
Identities = 166/250 (66%), Positives = 175/250 (70%), Gaps = 43/250 (17%)
Query: 97 AQRSEIRYNQTSQTSWTSSCTNRNAISSSYSSTGGLPGLKRRRGPASSHCQLTLSSSKTV 156
A+RS++RYNQ SQTS T SC RNA SSS+SST GL LKRRRGPASSHCQL LSSS TV
Sbjct: 641 ARRSQVRYNQRSQTSRTRSCLKRNASSSSHSSTEGLQELKRRRGPASSHCQLALSSSNTV 700
Query: 157 SEDRPQAVSSGHTQCEKAADIAPGQTLTLRNDSSTSEASRPSTHKFPLLPRRRGEPLMLP 216
SED PQAVSS T+CEKA D APGQTL R S S+ASRP
Sbjct: 701 SEDGPQAVSSRDTRCEKA-DTAPGQTLAPRGGSPRSQASRP------------------- 740
Query: 217 PPLELGYRVTVEDLDREKEAAFQRINSALQVEDKAISDCRPSWPSHTLSSLATGASGLPA 276
RINSAL VEDKAISDCRPS PSHTLSSLATGASG P
Sbjct: 741 -----------------------RINSALHVEDKAISDCRPSRPSHTLSSLATGASGGPP 777
Query: 277 VSKASSMDAQQETHKSQDCLGLLAPLASAAEVPSTAPVSGKKHRPPGPLFSSSDPLPATS 336
VSKA +MDAQQ+ KSQDCLGL+APLASAAEV STAPVSGKKHRPPGPLFSSSDPLPATS
Sbjct: 778 VSKAPTMDAQQDRPKSQDCLGLVAPLASAAEVSSTAPVSGKKHRPPGPLFSSSDPLPATS 837
Query: 337 SDSQDSAQVT 346
S S DSAQ T
Sbjct: 838 SHSGDSAQDT 847
>gi|239742580 PREDICTED: similar to Putative POM121-like protein
1-like [Homo sapiens]
Length = 897
Score = 504 bits (1297), Expect = e-143
Identities = 257/305 (84%), Positives = 266/305 (87%)
Query: 42 MPEQDKDPRVQENPGDQRRVPEVTGDAPSAFRPLRDNGGLSPFVPRPGPLQTDLHAQRSE 101
MPEQDKDPRVQENP DQR VPEVTGDA SAF PLRDNGG SPFVPRPGPLQTDLHAQ SE
Sbjct: 1 MPEQDKDPRVQENPDDQRTVPEVTGDARSAFWPLRDNGGPSPFVPRPGPLQTDLHAQSSE 60
Query: 102 IRYNQTSQTSWTSSCTNRNAISSSYSSTGGLPGLKRRRGPASSHCQLTLSSSKTVSEDRP 161
IRYN TSQTSWTSS T RNAISSSYSSTGGLPGLK+RRGPASS CQLTLS SKTVSEDRP
Sbjct: 61 IRYNHTSQTSWTSSSTKRNAISSSYSSTGGLPGLKQRRGPASSRCQLTLSYSKTVSEDRP 120
Query: 162 QAVSSGHTQCEKAADIAPGQTLTLRNDSSTSEASRPSTHKFPLLPRRRGEPLMLPPPLEL 221
QAVSSGHT+CEK AD APGQT+ S S+ SRP K PLLPRRRGEPLMLPPPLEL
Sbjct: 121 QAVSSGHTRCEKGADTAPGQTIAPTGGSPRSQDSRPRRRKIPLLPRRRGEPLMLPPPLEL 180
Query: 222 GYRVTVEDLDREKEAAFQRINSALQVEDKAISDCRPSWPSHTLSSLATGASGLPAVSKAS 281
GYRVT EDL EKE AFQRINSAL VEDKAI DCRPS PSHTLSSLATGASG P VSKA
Sbjct: 181 GYRVTAEDLHLEKETAFQRINSALHVEDKAIPDCRPSRPSHTLSSLATGASGGPPVSKAP 240
Query: 282 SMDAQQETHKSQDCLGLLAPLASAAEVPSTAPVSGKKHRPPGPLFSSSDPLPATSSDSQD 341
+MDAQQ+ KSQDCLGL+APLASAAEVPSTAPVSGKKHRPPGPLFSSSDPLPATS S+D
Sbjct: 241 TMDAQQDRPKSQDCLGLVAPLASAAEVPSTAPVSGKKHRPPGPLFSSSDPLPATSYHSRD 300
Query: 342 SAQVT 346
+AQVT
Sbjct: 301 TAQVT 305
Score = 286 bits (733), Expect = 1e-77
Identities = 167/252 (66%), Positives = 175/252 (69%), Gaps = 45/252 (17%)
Query: 97 AQRSEIRYNQTSQTSWTSSCTNRNAISSS--YSSTGGLPGLKRRRGPASSHCQLTLSSSK 154
AQRSE+RYNQ SQTS T SC RNA SSS +SST GL LKRRRGPASSHCQL SSS
Sbjct: 368 AQRSEVRYNQRSQTSRTRSCLKRNASSSSSSHSSTEGLQELKRRRGPASSHCQLAHSSSN 427
Query: 155 TVSEDRPQAVSSGHTQCEKAADIAPGQTLTLRNDSSTSEASRPSTHKFPLLPRRRGEPLM 214
TVSED PQAVSSGH +CE A APGQTL R S S+ASRP
Sbjct: 428 TVSEDGPQAVSSGH-RCENKAGTAPGQTLAPRGGSPRSQASRP----------------- 469
Query: 215 LPPPLELGYRVTVEDLDREKEAAFQRINSALQVEDKAISDCRPSWPSHTLSSLATGASGL 274
INSAL VEDKAISDCRPS PSHTLSSLATGASG
Sbjct: 470 -------------------------HINSALYVEDKAISDCRPSRPSHTLSSLATGASGG 504
Query: 275 PAVSKASSMDAQQETHKSQDCLGLLAPLASAAEVPSTAPVSGKKHRPPGPLFSSSDPLPA 334
P VSKA +MDAQQ+ KSQDCLGL+APLASAAEVPSTAPVSGKKHRPPGPLFSSSDPLPA
Sbjct: 505 PPVSKAPTMDAQQDRPKSQDCLGLVAPLASAAEVPSTAPVSGKKHRPPGPLFSSSDPLPA 564
Query: 335 TSSDSQDSAQVT 346
TSS S+DSAQVT
Sbjct: 565 TSSHSRDSAQVT 576
Score = 286 bits (731), Expect = 2e-77
Identities = 166/250 (66%), Positives = 172/250 (68%), Gaps = 43/250 (17%)
Query: 97 AQRSEIRYNQTSQTSWTSSCTNRNAISSSYSSTGGLPGLKRRRGPASSHCQLTLSSSKTV 156
AQRSE+RYNQ SQTS T SC RNA SSS+SST GL LKRRRGPASSHCQL SSS TV
Sbjct: 642 AQRSEVRYNQRSQTSRTRSCLKRNASSSSHSSTEGLQELKRRRGPASSHCQLAHSSSNTV 701
Query: 157 SEDRPQAVSSGHTQCEKAADIAPGQTLTLRNDSSTSEASRPSTHKFPLLPRRRGEPLMLP 216
SED PQAVSSGH +CE A APGQTL R S+ASRP
Sbjct: 702 SEDGPQAVSSGH-RCENKAGTAPGQTLAPRGGYPRSQASRP------------------- 741
Query: 217 PPLELGYRVTVEDLDREKEAAFQRINSALQVEDKAISDCRPSWPSHTLSSLATGASGLPA 276
RINSAL VEDKAISDCRPS PSHTLSSLATGASG P
Sbjct: 742 -----------------------RINSALHVEDKAISDCRPSRPSHTLSSLATGASGGPP 778
Query: 277 VSKASSMDAQQETHKSQDCLGLLAPLASAAEVPSTAPVSGKKHRPPGPLFSSSDPLPATS 336
VSKA +MDAQQ+ KSQDCLGLLAPLASAAEV STAPVSGKKHRPPGPLFSSSDPLPATS
Sbjct: 779 VSKAPTMDAQQDRPKSQDCLGLLAPLASAAEVSSTAPVSGKKHRPPGPLFSSSDPLPATS 838
Query: 337 SDSQDSAQVT 346
S S DSAQ T
Sbjct: 839 SHSGDSAQDT 848
>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
Length = 984
Score = 151 bits (382), Expect = 7e-37
Identities = 125/355 (35%), Positives = 170/355 (47%), Gaps = 37/355 (10%)
Query: 22 SPDLCPGKIVLRALKESGAGMPEQDKDPRVQENPGDQRRVPEVTGDAPSAFRPLRDNGGL 81
+PD C + VL ALKE +++D + ++RR + +G SAF PL NG
Sbjct: 38 APDPCAKETVLSALKEKEKKRTVEEEDQIFLDGQENKRRRHDSSGSGHSAFEPLVANGVP 97
Query: 82 SPFVPRPGPLQTDLHAQRSEIRYNQTSQTSWTSSCT----------NRNAISSSYSSTGG 131
+ FVP+PG L+ L++Q S+ N+ S++S SS T +RNAI+SSYSST G
Sbjct: 98 ASFVPKPGSLKRGLNSQSSDDHLNKRSRSSSMSSLTGAYASGIPSSSRNAITSSYSSTRG 157
Query: 132 LPGLKRRRGPASSHCQLTLSS--------SKTVSEDRPQAVSSGHT--------QCEKAA 175
+ L +R GP+SS SS +K + E+ SS T Q EKAA
Sbjct: 158 ISQLWKRNGPSSSPFSSPASSRSQTPERPAKKIREEELCHHSSSSTPLAADRESQGEKAA 217
Query: 176 DIAPGQTLTLRNDSSTSEASRPSTHKFPLLPRRRGEPLMLPPPLELGYRVTVEDLDREKE 235
D P + N ST +S K LLP RRGE L LPPP +LGY +T EDLD EK+
Sbjct: 218 DTTPRKKQN-SNSQSTPGSSGQRKRKVQLLPSRRGEQLTLPPPPQLGYSITAEDLDLEKK 276
Query: 236 AAFQRINSALQVEDKAISDCRP-----SWPSHTLSSLATGASGLPAVSKASSMDAQQETH 290
A+ Q N AL+ + A S+ + PS T + A + P A S + E+
Sbjct: 277 ASLQWFNQALEDKSDAASNSVTETPPITQPSFTFTLPAAAPASPPTSLLAPSTNPLLESL 336
Query: 291 KSQDCLGLLAPL---ASAAEVPSTAPVSGKKHRPPGPLFSSSDP--LPATSSDSQ 340
K L P A AA + +P PP L S P LP+ S DS+
Sbjct: 337 KKMQTPPSLPPCPESAGAATTEALSPPKTPSLLPPLGLSQSGPPGLLPSPSFDSK 391
Score = 32.7 bits (73), Expect = 0.49
Identities = 70/336 (20%), Positives = 103/336 (30%), Gaps = 40/336 (11%)
Query: 14 FGVHNTRLSPDLCPGKIVLRAL-KESGAGMPEQDKD------PRVQENPGDQRRVPEVTG 66
FG NT S P + K P+ +K+ P V +P T
Sbjct: 441 FGTQNTSPSSPAAPAASSAPPMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSSLPTTTS 500
Query: 67 DAPSAFRPLRDNGGLSPFVPRPGPLQTDLHAQRSEIRYNQTSQTSWTSSCTNRNAISSSY 126
F+P+ + G VP P P + QT+ T T+ T +
Sbjct: 501 TTAPTFQPVFSSMGPPASVPLPAPF------------FKQTT-TPATAPTTTAPLFTGLA 547
Query: 127 SSTGGLPGLKRRRGPASSHCQLTLSSSKTVSEDRPQAVSSGHTQCEKAADIAPGQTLTLR 186
S+T + P +S T S+SK +VSS + A Q
Sbjct: 548 SATSAV-------APITSASPSTDSASKPAFGFGINSVSSSSVSTTTSTATAASQPFLFG 600
Query: 187 NDSSTSEASRPSTHKFPLLPRRRGEPLMLPPPLEL-----GYRVTVEDLDREKEAAFQRI 241
+++ + P+ + G+P LP + V A F
Sbjct: 601 APQASAASFTPAMGSI----FQFGKPPALPTTTTVTTFSQSLHTAVPTATSSSAADFSGF 656
Query: 242 NSALQVEDKAISDCRPSWPSHTLSSLATGASGLPAVSKASSMDAQQETHKSQDCLGLLAP 301
S L A S S P+ T S+ +T +P S A S Q G
Sbjct: 657 GSTLATSAPATS----SQPTLTFSNTSTPTFNIPFGSSAKSPLPSYPGANPQPAFGAAEG 712
Query: 302 LASAAEVPSTAPVSGKKHRPPGPLFSSSDPLPATSS 337
A P+ AP G ++ P PA S
Sbjct: 713 QPPGAAKPALAPSFGSSFTFGNSAAPAAAPTPAPPS 748
>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
Length = 987
Score = 150 bits (379), Expect = 2e-36
Identities = 124/355 (34%), Positives = 170/355 (47%), Gaps = 37/355 (10%)
Query: 22 SPDLCPGKIVLRALKESGAGMPEQDKDPRVQENPGDQRRVPEVTGDAPSAFRPLRDNGGL 81
+PD C + VL ALKE +++D + ++RR + +G SAF PL +G
Sbjct: 38 APDPCAKETVLSALKEKKKKRTVEEEDQIFLDGQENKRRRHDSSGSGHSAFEPLVASGVP 97
Query: 82 SPFVPRPGPLQTDLHAQRSEIRYNQTSQTSWTSSCT----------NRNAISSSYSSTGG 131
+ FVP+PG L+ L++Q S+ N+ S++S SS T +RNAI+SSYSST G
Sbjct: 98 ASFVPKPGSLKRGLNSQSSDDHLNKRSRSSSMSSLTGAYTSGIPSSSRNAITSSYSSTRG 157
Query: 132 LPGLKRRRGPASSHCQLTLSS--------SKTVSEDRPQAVSSGHT--------QCEKAA 175
+ L +R GP+SS SS +K + E+ SS T Q EKAA
Sbjct: 158 ISQLWKRNGPSSSPFSSPASSRSQTPERPAKKIREEELCHHSSSSTPLAADKESQGEKAA 217
Query: 176 DIAPGQTLTLRNDSSTSEASRPSTHKFPLLPRRRGEPLMLPPPLELGYRVTVEDLDREKE 235
D P + N ST +S K LLP RRGE L LPPP +LGY +T EDLD EK+
Sbjct: 218 DTTPRKKQN-SNSQSTPGSSGQRKRKVQLLPSRRGEQLTLPPPPQLGYSITAEDLDLEKK 276
Query: 236 AAFQRINSALQVEDKAISDC-----RPSWPSHTLSSLATGASGLPAVSKASSMDAQQETH 290
A+ Q N AL+ + A S+ + PS T + A + P A S + E+
Sbjct: 277 ASLQWFNQALEDKSDAASNSVTETPPTTQPSFTFTLPAAATASPPTSLLAPSTNPLLESL 336
Query: 291 KSQDCLGLLAPL---ASAAEVPSTAPVSGKKHRPPGPLFSSSDP--LPATSSDSQ 340
K L P A AA + +P PP L S P LP+ S DS+
Sbjct: 337 KKMQTPPSLPPCPESAGAATTEALSPPKTPSLLPPLGLSQSGPPGLLPSPSFDSK 391
Score = 31.2 bits (69), Expect = 1.4
Identities = 70/335 (20%), Positives = 104/335 (31%), Gaps = 44/335 (13%)
Query: 14 FGVHNTRLSPDLCPGKIVLRAL-KESGAGMPEQDKD------PRVQENPGDQRRVPEVTG 66
FG NT S P + K P+ +K+ P V +P T
Sbjct: 441 FGTQNTSPSSPAAPAASSASPMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSSLPTTTS 500
Query: 67 DAPSAFRPLRDNGGLSPFVPRPGPLQTDLHAQRSEIRYNQTSQTSWTSSCTNRNAISSSY 126
F+P+ + G VP P P + QT+ T T+ T +
Sbjct: 501 TTAPTFQPVFSSMGPPASVPLPAPF------------FKQTT-TPATAPTTTAPLFTGLA 547
Query: 127 SSTGGLPGLKRRRGPASSHCQLTLSSSKTVSEDRPQAVSSGHTQCEKAADIAPGQTLTLR 186
S+T + P +S T S+SK +VSS + A Q
Sbjct: 548 SATSAV-------APITSASPSTDSASKPAFGFGINSVSSSSVSTTTSTATAASQPFLFG 600
Query: 187 NDSSTSEASRPSTHKFPLLPRRRGEPLMLPPPLEL-----GYRVTVEDLDREKEAAFQRI 241
+++ + P+ + G+P LP + V A F
Sbjct: 601 APQASAASFTPAMGSI----FQFGKPPALPTTTTVTTFSQSLPTAVPTATSSSAADFSGF 656
Query: 242 NSALQVEDKAISDCRPSWPSHTLSSLATGASGLPAVSKASSMDAQQETHKSQDCLGLLAP 301
S L A S S P+ T S+ +T +P S A S Q G
Sbjct: 657 GSTLATSAPATS----SQPTLTFSNTSTPTFNIPFGSSAKSPLPSYPGANPQPAFGAAEG 712
Query: 302 LASAAEVPSTAPVSGKKHRPPGPLFSSSDPLPATS 336
A P+ P G +S+ P PAT+
Sbjct: 713 QPPGAAKPALTPSFGSSF----TFGNSAAPAPATA 743
>gi|239754624 PREDICTED: similar to hCG1998564 [Homo sapiens]
Length = 526
Score = 145 bits (365), Expect = 7e-35
Identities = 119/336 (35%), Positives = 159/336 (47%), Gaps = 34/336 (10%)
Query: 22 SPDLCPGKIVLRALKESGAGMPEQDKDPRVQENPGDQRRVPEVTGDAPSAFRPLRDNGGL 81
+PD C + VL ALKE +++D + ++RR + +G SAF PL NG
Sbjct: 166 APDPCAKETVLSALKEKEKKRTVEEEDQIFLDGQENKRRRHDSSGSGHSAFEPLVANGVP 225
Query: 82 SPFVPRPGPLQTDLHAQRSEIRYNQTSQTSWTSSCT----------NRNAISSSYSSTGG 131
+ FVP+PG L+ L++Q S+ N+ S++S SS T +RNAI+SSYSST G
Sbjct: 226 ASFVPKPGSLKRGLNSQSSDDHLNKRSRSSSMSSLTGAYASGIPSSSRNAITSSYSSTRG 285
Query: 132 LPGLKRRRGPASSHCQLTLSS--------SKTVSEDRPQAVSSGHT--------QCEKAA 175
+ L +R GP+SS SS +K + E+ SS T Q EKAA
Sbjct: 286 ISQLWKRNGPSSSPFSSPASSRSQTPERPAKKIREEELCHHSSSSTPLAADRESQGEKAA 345
Query: 176 DIAPGQTLTLRNDSSTSEASRPSTHKFPLLPRRRGEPLMLPPPLELGYRVTVEDLDREKE 235
D P + N ST +S K LLP RRGE L LPPP +LGY +T EDLD EK+
Sbjct: 346 DTTPRKKQN-SNSQSTPGSSGQRKRKVQLLPSRRGEQLTLPPPPQLGYSITAEDLDLEKK 404
Query: 236 AAFQRINSALQVEDKAISDCRPSWPSHTLSSLATGASGLPAVSKASSMDAQQETHKSQDC 295
A+ Q N AL+ + A S+ P T S LPA + AS + +
Sbjct: 405 ASLQWFNQALEDKSDAASNSVTETPPITQPSF---TFTLPAAAPASPPTSLLAPSTNP-- 459
Query: 296 LGLLAPLASAAEVPSTAPVSGKKHRPPGPLFSSSDP 331
LL L PS P G+ G SS P
Sbjct: 460 --LLESLKKMQTPPSLPPCPGELEWGRGSSLLSSIP 493
>gi|253683544 POM121 membrane glycoprotein-like 2 [Homo sapiens]
Length = 1035
Score = 101 bits (252), Expect = 9e-22
Identities = 109/336 (32%), Positives = 149/336 (44%), Gaps = 40/336 (11%)
Query: 24 DLCPGKIVLRALKESGAGMPEQDKDPRVQENPGDQRRVPEVTGDAPSAFRPLRDNGGLSP 83
D C + VLRAL+E G + +P E+ +RR PE PSAF+PL NG L+
Sbjct: 152 DPCSKETVLRALRECRKGKGRLE-EPLFPESLDSKRRSPETR---PSAFKPLMKNGTLTS 207
Query: 84 FVPRPGPLQTDLHAQRSE----IRYNQTSQTSWTS------SCTNRNAISSSYSSTGGLP 133
FVPRPGPL+ LH+ S+ R N +S +S S + RNAI SSYSS
Sbjct: 208 FVPRPGPLKRSLHSWGSDHSLTKRPNCSSMSSLASIYRGGTLSSKRNAIGSSYSSCRNFS 267
Query: 134 GLKRRRGPASSHCQLTLSSSKTVSEDRPQAVSSGHTQCEKAADIAPGQTLTLRNDSST-- 191
+R P +VS + P+ C + P + L +D +
Sbjct: 268 DPWKRSVP-------------SVSFETPEWPIKKEKSCHR-----PSSPVPLVSDFESLG 309
Query: 192 -SEASRPSTHKFPLLPRRRGEPLMLPPPLELGYRVTVEDLDREKEAAFQRINSALQVEDK 250
SE+S K P LP + PP +LGY V+ E+L K+A Q N+A + +
Sbjct: 310 GSESSGQQNQKIPQLPSSPENLVSEIPPPQLGYAVSDENLTLGKKAELQVSNNAGEDTTE 369
Query: 251 AISDCRP-SWPSHTLS-SLATGASGLPAVSKASSMDAQQETHKSQDCLGLLAPLASAAEV 308
+D P +W + S SLA +S A+ + K Q LG LA S E
Sbjct: 370 VNTDPFPETWLAIQPSLSLALPSSETDLTQGANPQ--LENLRKMQKSLGPLASPQSTGEA 427
Query: 309 PSTAPVSGK-KHRPPGPLFSSSDPLPATSSDSQDSA 343
S A K P P S S+ LP TS DS+ +A
Sbjct: 428 TSVAHSPLKTPSLPTPPGCSQSELLPGTSPDSKPTA 463
>gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo
sapiens]
Length = 834
Score = 87.8 bits (216), Expect = 1e-17
Identities = 84/245 (34%), Positives = 105/245 (42%), Gaps = 30/245 (12%)
Query: 113 TSSCTNRNAISSSYSSTGGLPGLKRRRGPASSHCQLTLSSSKTVSEDRPQAVSSGHT--- 169
TS RN SSS S+ PASS Q +K + E+ SS T
Sbjct: 7 TSELWKRNGPSSSPFSS-----------PASSRSQTPERPAKKIREEEMCHHSSSSTPLA 55
Query: 170 -----QCEKAADIAPGQTLTLRNDSSTSEASRPSTHKFPLLPRRRGEPLMLPPPLELGYR 224
Q EKAAD P + N ST +S K LLP RRGE L LPPP +LGY
Sbjct: 56 ADKESQGEKAADTTPRKKQN-SNSQSTPGSSGQRKRKVQLLPSRRGEQLTLPPPPQLGYS 114
Query: 225 VTVEDLDREKEAAFQRINSALQVEDKAISDCRP-----SWPSHTLSSLATGASGLPAVSK 279
+T EDLD EK+A+ Q N AL+ + A S+ + PS T + A + P
Sbjct: 115 ITAEDLDLEKKASLQWFNQALEDKSDAASNSVTETPPITQPSFTFTLPAAAPASPPTSLL 174
Query: 280 ASSMDAQQETHKSQDCLGLLAPL---ASAAEVPSTAPVSGKKHRPPGPLFSSSDP--LPA 334
A S + E+ K L P A AA + +P PP L S P LP+
Sbjct: 175 APSTNPLLESLKKMQTPPSLPPCPESAGAATTEALSPPKTPNLLPPLGLSQSGPPGLLPS 234
Query: 335 TSSDS 339
S DS
Sbjct: 235 PSFDS 239
Score = 31.2 bits (69), Expect = 1.4
Identities = 69/336 (20%), Positives = 102/336 (30%), Gaps = 40/336 (11%)
Query: 14 FGVHNTRLSPDLCPGKIVLRAL-KESGAGMPEQDKD------PRVQENPGDQRRVPEVTG 66
FG NT S P + K P+ +K+ P V +P T
Sbjct: 290 FGTQNTSPSSPAAPAASSASPMFKPIFTAPPKSEKEGPTPPGPSVSATAPSSSSLPTTTS 349
Query: 67 DAPSAFRPLRDNGGLSPFVPRPGPLQTDLHAQRSEIRYNQTSQTSWTSSCTNRNAISSSY 126
F+P+ + G VP P P + QT+ T T+ T +
Sbjct: 350 TTAPTFQPVFSSMGPPASVPLPAPF------------FKQTT-TPATAPTTTAPLFTGLA 396
Query: 127 SSTGGLPGLKRRRGPASSHCQLTLSSSKTVSEDRPQAVSSGHTQCEKAADIAPGQTLTLR 186
S+T + P +S T S+SK +VSS + A Q
Sbjct: 397 SATSAV-------APITSASPSTDSASKPAFGFGINSVSSSSVSTTTSTATAASQPFLFG 449
Query: 187 NDSSTSEASRPSTHKFPLLPRRRGEPLMLPPPLEL-----GYRVTVEDLDREKEAAFQRI 241
+++ + P+ + G+P LP + V A F
Sbjct: 450 APQASAASFTPAMGSI----FQFGKPPALPTTTTVTTFSQSLPTAVPTATSSSAADFSGF 505
Query: 242 NSALQVEDKAISDCRPSWPSHTLSSLATGASGLPAVSKASSMDAQQETHKSQDCLGLLAP 301
S L A S S P+ T S+ +T +P S A S Q G
Sbjct: 506 GSTLATSAPATS----SQPTLTFSNTSTPTFNIPFGSSAKSPLPSYPGANPQPAFGAAEG 561
Query: 302 LASAAEVPSTAPVSGKKHRPPGPLFSSSDPLPATSS 337
A P+ P G ++ P PA S
Sbjct: 562 QPPGAAKPALTPSFGSSFTFGNSAAPAAAPTPAPPS 597
>gi|112421134 hypothetical protein LOC23742 [Homo sapiens]
Length = 1156
Score = 61.6 bits (148), Expect = 1e-09
Identities = 80/333 (24%), Positives = 132/333 (39%), Gaps = 35/333 (10%)
Query: 37 ESGAGMPEQDKDPRVQENPGDQRRVPEVTGDAPSAFRPLRDNGGLSPFVPRPGPLQTDLH 96
+ G ++D+DP E D++R P +G+A S R G ++ F PGPL+ +++
Sbjct: 154 QEGPRRVKKDEDPVQIEGEDDEKRTPLSSGEASSTSRSQGTQGDVASFRCSPGPLEGNVY 213
Query: 97 AQRSEIRYNQTSQTSWTSSCTNRNAISSSYSSTG-----GLPGLKRRRGPASS-HCQLTL 150
+ SE ++ +Q S SSC A+ S++S G G P P + C L
Sbjct: 214 HKFSENSMSEKAQASPASSCLEGPAMPSTHSQAGCARHLGKPDPDATAPPEPAVGCSLLQ 273
Query: 151 S--SSKTVSEDRPQA--------VSSGHTQCEKAADIAPGQTLTLRNDSSTSEASRPSTH 200
+++ ++E+ P + +S EK I P R + +RP
Sbjct: 274 QKLAAEVLNEEPPPSSLGLPIPLMSGKRMPDEKPFCIPPRSAAPPR-----AARNRPCKR 328
Query: 201 KFP---LLPRRRGEPLM-----LPPPLELGYRVTVEDLDR-EKEAAFQRINSALQVEDKA 251
K LLP PL+ LPPP +L DL EK ++R + L+ + +
Sbjct: 329 KMSIPLLLPLPPSLPLLWDRGELPPPAKLPCLSVEGDLHTLEKSPEYKRNSRILEDKTET 388
Query: 252 ISDCRPSWPSHTLSSLATGASGLPAVSKASSMDAQQETHKSQDCLGLLAPLASAAEVPST 311
+++ + P+ + S LP + S + A D PL ST
Sbjct: 389 MTNSSITQPAPSFSQPVQTTDSLPLTTYTSQVSAPLPIPDLADL--ATGPLILPIPPLST 446
Query: 312 APVSGKKHR---PPGPLFSSSDPLPATSSDSQD 341
P +K P PL +D +P S +
Sbjct: 447 TPKMDEKIAFTIPNSPLALPADLVPILGDQSNE 479
>gi|239735603 POM121 membrane glycoprotein-like 12 [Homo sapiens]
Length = 296
Score = 47.4 bits (111), Expect = 2e-05
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 2 DSLW-GPGAGSHPFGVHNTRLSPDLCPGKIVLRALKESGAGMPEQDKDP--RVQENPGDQ 58
+S W PG + P G + D C + +L AL + G D V ++ G +
Sbjct: 148 ESPWRSPGQRARPAGRPAAQELLDPCTRETLLGALSQCPKGSARFDGPLWFEVSDSKGGR 207
Query: 59 RRVPEVTGDAPSAFRPLRDNGGLSPFVPRPGPLQTDL 95
R + PSAF+PL NG ++ FVPRPGPL+ L
Sbjct: 208 RNLQP----RPSAFKPLSKNGAVASFVPRPGPLKPSL 240
>gi|239756026 PREDICTED: UPF0607 protein ENSP00000383144-like [Homo
sapiens]
Length = 341
Score = 41.2 bits (95), Expect = 0.001
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 14 FGVHNTRLSPDLCPGKIVLRALKESGAGMPEQDKDPRVQENPGDQRRVPEVTGDAPSAFR 73
F + L + P ++ ++ + KD + D +R P G+A S R
Sbjct: 55 FNLQLPSLDEQVIPARLPKMEVRAEEPKEATEVKDQVETQEQEDNKRGPCSNGEAASTSR 114
Query: 74 PLRDNGGLSPFVPRPGPLQTDLHAQRSEIRYNQT--SQTSWTSSCTNRNAISSSYSSTGG 131
PL G L+ P PL+ ++H +S NQT +Q S + + ++SS+S GG
Sbjct: 115 PLETQGNLTSSWYNPRPLEGNVHL-KSLTEKNQTDKAQVHAVSFYSKGHGVASSHSPAGG 173
Query: 132 L 132
+
Sbjct: 174 I 174
>gi|239750549 PREDICTED: UPF0607 protein ENSP00000383144-like [Homo
sapiens]
Length = 341
Score = 41.2 bits (95), Expect = 0.001
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 14 FGVHNTRLSPDLCPGKIVLRALKESGAGMPEQDKDPRVQENPGDQRRVPEVTGDAPSAFR 73
F + L + P ++ ++ + KD + D +R P G+A S R
Sbjct: 55 FNLQLPSLDEQVIPARLPKTEVRAEEPKEATEVKDQVETQEQEDNKRGPCSNGEAASTSR 114
Query: 74 PLRDNGGLSPFVPRPGPLQTDLHAQRSEIRYNQT--SQTSWTSSCTNRNAISSSYSSTGG 131
PL G L+ P PL+ ++H +S NQT +Q S + + ++SS+S GG
Sbjct: 115 PLETQGNLTSSWYNPRPLEGNVHL-KSLTEKNQTDKAQVHAVSFYSKGHGVASSHSPAGG 173
Query: 132 L 132
+
Sbjct: 174 I 174
>gi|239744846 PREDICTED: UPF0607 protein ENSP00000383144-like [Homo
sapiens]
Length = 341
Score = 41.2 bits (95), Expect = 0.001
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 14 FGVHNTRLSPDLCPGKIVLRALKESGAGMPEQDKDPRVQENPGDQRRVPEVTGDAPSAFR 73
F + L + P ++ ++ + KD + D +R P G+A S R
Sbjct: 55 FNLQLPSLDEQVIPARLPKTEVRAEEPKEATEVKDQVETQEQEDNKRGPCSNGEAASTSR 114
Query: 74 PLRDNGGLSPFVPRPGPLQTDLHAQRSEIRYNQT--SQTSWTSSCTNRNAISSSYSSTGG 131
PL G L+ P PL+ ++H +S NQT +Q S + + ++SS+S GG
Sbjct: 115 PLETQGNLTSSWYNPRPLEGNVHL-KSLTEKNQTDKAQVHAVSFYSKGHGVASSHSPAGG 173
Query: 132 L 132
+
Sbjct: 174 I 174
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 40.8 bits (94), Expect = 0.002
Identities = 85/331 (25%), Positives = 123/331 (37%), Gaps = 45/331 (13%)
Query: 23 PDLCPGKIVLRALKESGAGMPEQDKDP---RVQENPGDQRRVPEVTGDAPSAFRPLRDNG 79
P L PG++ L + A MP ++ +P PEV+ AP A PL +
Sbjct: 1346 PTLTPGRLPTPTLGTARAPMPTPTLVRPLLKLVHSPS-----PEVSASAPGA-APLTISS 1399
Query: 80 GLSPFVPRPGPLQTDLHAQRSEIRYNQTSQTSWTSSCTNRNAISSSYSSTGGLPGLKRRR 139
L PGP + + S S S T S +++ S +T LP
Sbjct: 1400 PLHVPSSLPGPASSPMPIPNSS---PLASPVSSTVSVPLSSSLPISVPTT--LPA----- 1449
Query: 140 GPASSHCQLTLSSSKTVSEDRPQAVSSGHTQCEKAADIAPGQ-TLTLRNDSSTSEASRPS 198
PAS+ + +S+ TVS P ++S APG +L S ++ A
Sbjct: 1450 -PASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLG 1508
Query: 199 THKFPLLPRRR--GEPLMLPPPLELGYRVTVEDLDREKEAAFQRINSALQVEDKAISDCR 256
P L + G PL+L P V L+ A S + V A++
Sbjct: 1509 LATAPSLSSSQTPGHPLLLAPTSS-----HVPGLNSTVAPAC----SPVLVPASALASPF 1559
Query: 257 PSWPSHT---LSSLATGASGLPAVSKA-SSMDAQQETHKSQDCLGLLAPLASAAEVPSTA 312
PS P+ S LA +S A++ + M A Q + LAPL A P A
Sbjct: 1560 PSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAA 1619
Query: 313 PVSGKKHRP---------PGPLFSSSDPLPA 334
PV P PG +S+ P+PA
Sbjct: 1620 PVLASSQTPVPVMAPSSTPGTSLASASPVPA 1650
>gi|169173209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 352
Score = 40.0 bits (92), Expect = 0.003
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 14 FGVHNTRLSPDLCPGKIVLRALKESGAGMPEQDKDPRVQENPGDQRRVPEVTGDAPSAFR 73
F + L + P +++ ++ + KD + D + P G+A S R
Sbjct: 130 FNLQLPSLDEQVIPARLLKMEVRAEEPKEATEVKDQVETQGQEDNKMGPCSNGEAASTSR 189
Query: 74 PLRDNGGLSPFVPRPGPLQTDLHAQRSEIRYNQT--SQTSWTSSCTNRNAISSSYSSTGG 131
PL G L+ P PL+ ++H +S NQT +Q S + + ++SS+S GG
Sbjct: 190 PLETQGNLTSSWYNPRPLEGNVHL-KSLTEKNQTDKAQVHAVSFYSKGHGVASSHSPAGG 248
Query: 132 L 132
+
Sbjct: 249 I 249
>gi|169172420 PREDICTED: UPF0607 protein ENSP00000382826-like [Homo
sapiens]
Length = 352
Score = 40.0 bits (92), Expect = 0.003
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 14 FGVHNTRLSPDLCPGKIVLRALKESGAGMPEQDKDPRVQENPGDQRRVPEVTGDAPSAFR 73
F + L + P +++ ++ + KD + D + P G+A S R
Sbjct: 130 FNLQLPSLDEQVIPARLLKMEVRAEEPKEATEVKDQVETQGQEDNKMGPCSNGEAASTSR 189
Query: 74 PLRDNGGLSPFVPRPGPLQTDLHAQRSEIRYNQT--SQTSWTSSCTNRNAISSSYSSTGG 131
PL G L+ P PL+ ++H +S NQT +Q S + + ++SS+S GG
Sbjct: 190 PLETQGNLTSSWYNPRPLEGNVHL-KSLTENNQTDKAQVHAVSFYSKGHGVASSHSPVGG 248
Query: 132 L 132
+
Sbjct: 249 I 249
>gi|169172709 PREDICTED: UPF0607 protein ENSP00000382826-like [Homo
sapiens]
Length = 352
Score = 40.0 bits (92), Expect = 0.003
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 14 FGVHNTRLSPDLCPGKIVLRALKESGAGMPEQDKDPRVQENPGDQRRVPEVTGDAPSAFR 73
F + L + P +++ ++ + KD + D + P G+A S R
Sbjct: 130 FNLQLPSLDEQVIPARLLKMEVRAEEPKEATEVKDQVETQGQEDNKMGPCSNGEAASTSR 189
Query: 74 PLRDNGGLSPFVPRPGPLQTDLHAQRSEIRYNQT--SQTSWTSSCTNRNAISSSYSSTGG 131
PL G L+ P PL+ ++H +S NQT +Q S + + ++SS+S GG
Sbjct: 190 PLETQGNLTSSWYNPRPLEGNVHL-KSLTEKNQTDKAQVHAVSFYSKGHGVASSHSPAGG 248
Query: 132 L 132
+
Sbjct: 249 I 249
>gi|148612857 sickle tail isoform 3 [Homo sapiens]
Length = 1309
Score = 39.3 bits (90), Expect = 0.005
Identities = 73/313 (23%), Positives = 120/313 (38%), Gaps = 52/313 (16%)
Query: 63 EVTGDAPSAFRPLRDNGGLSPFVPRPGPLQTDLHAQRSEIRYNQTSQTSWTSSCTNRNAI 122
E++ D+P++ + L GG SP P P P ++ L S + ++ +T N A
Sbjct: 990 ELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPG--SGLTTTRSGDVVYTGRKENITAK 1047
Query: 123 SSSYSSTGGLPGLKRRRGPASSHCQLTLSSSKTVSEDRPQAVSSGHTQCEKAADIAPGQT 182
+SS G P + + PA S P V++ ++ E+ + +
Sbjct: 1048 ASS-EDAGPSPQTRATKYPAEEPASAWTPS--------PPPVTTSSSKDEEEEEEEGDKI 1098
Query: 183 LTLRNDSSTSEASRPSTHKFPLLPRRRGEPLMLPPPLELGYRVTVEDLDREKEAAFQRIN 242
+ SS + P T + P+ + P L P G + ++D + ++A N
Sbjct: 1099 MAELQGSSGA----PQTSRMPVPMSAKNRPGTLDKP---GKQSKLQDPRQYRQA-----N 1146
Query: 243 SALQVEDKAISDCRPSWPSHTLSSLATGA---SGLPAVSKASSMDAQQETHKSQDCLGLL 299
+ + PS P+ + +L+ + S LP+ S SS K L
Sbjct: 1147 GSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPL 1206
Query: 300 APLA-----SAAEVPSTAPVS---------GKKH-----------RPPGPL-FSSSDPLP 333
+P SA+ +PS + S GK H R P PL FSSS P P
Sbjct: 1207 SPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSP 1266
Query: 334 ATSSDSQDSAQVT 346
A+S A+ T
Sbjct: 1267 ASSVSLNQGAKGT 1279
>gi|148612813 sickle tail isoform 2 [Homo sapiens]
Length = 1264
Score = 39.3 bits (90), Expect = 0.005
Identities = 73/313 (23%), Positives = 120/313 (38%), Gaps = 52/313 (16%)
Query: 63 EVTGDAPSAFRPLRDNGGLSPFVPRPGPLQTDLHAQRSEIRYNQTSQTSWTSSCTNRNAI 122
E++ D+P++ + L GG SP P P P ++ L S + ++ +T N A
Sbjct: 945 ELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPG--SGLTTTRSGDVVYTGRKENITAK 1002
Query: 123 SSSYSSTGGLPGLKRRRGPASSHCQLTLSSSKTVSEDRPQAVSSGHTQCEKAADIAPGQT 182
+SS G P + + PA S P V++ ++ E+ + +
Sbjct: 1003 ASS-EDAGPSPQTRATKYPAEEPASAWTPS--------PPPVTTSSSKDEEEEEEEGDKI 1053
Query: 183 LTLRNDSSTSEASRPSTHKFPLLPRRRGEPLMLPPPLELGYRVTVEDLDREKEAAFQRIN 242
+ SS + P T + P+ + P L P G + ++D + ++A N
Sbjct: 1054 MAELQGSSGA----PQTSRMPVPMSAKNRPGTLDKP---GKQSKLQDPRQYRQA-----N 1101
Query: 243 SALQVEDKAISDCRPSWPSHTLSSLATGA---SGLPAVSKASSMDAQQETHKSQDCLGLL 299
+ + PS P+ + +L+ + S LP+ S SS K L
Sbjct: 1102 GSAKKSGGDFKPTSPSLPASKIPALSPSSGKSSSLPSSSGDSSNLPNPPATKPSIASNPL 1161
Query: 300 APLA-----SAAEVPSTAPVS---------GKKH-----------RPPGPL-FSSSDPLP 333
+P SA+ +PS + S GK H R P PL FSSS P P
Sbjct: 1162 SPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSP 1221
Query: 334 ATSSDSQDSAQVT 346
A+S A+ T
Sbjct: 1222 ASSVSLNQGAKGT 1234
>gi|169205253 PREDICTED: hypothetical protein [Homo sapiens]
Length = 3859
Score = 38.9 bits (89), Expect = 0.007
Identities = 24/73 (32%), Positives = 31/73 (42%)
Query: 30 IVLRALKESGAGMPEQDKDPRVQENPGDQRRVPEVTGDAPSAFRPLRDNGGLSPFVPRPG 89
+V+ G +P+ DP V PGD VP GD P D+G P P G
Sbjct: 2683 LVVPVFPTDGILVPDLADDPVVPVTPGDDPVVPVTPGDDPVIPVTPADDGPFVPVTPAVG 2742
Query: 90 PLQTDLHAQRSEI 102
P+ DL A S +
Sbjct: 2743 PVVPDLTADDSVV 2755
>gi|239756593 PREDICTED: UPF0607 protein ENSP00000381418-like [Homo
sapiens]
Length = 415
Score = 37.4 bits (85), Expect = 0.020
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 47 KDPRVQENPGDQRRVPEVTGDAPSAFRPLRDNGGLSPFVPRPGPLQTDLHAQRSEIRYNQ 106
KD + D +R P G+A S RPL G L+ P L+ ++H +S NQ
Sbjct: 162 KDQVETQGQEDNKRGPCSNGEAASTSRPLETQGNLTSSWYNPRTLEGNVHL-KSLTENNQ 220
Query: 107 T--SQTSWTSSCTNRNAISSSYSSTGGL 132
T +Q S + + ++SS+S GG+
Sbjct: 221 TDKAQVHAVSFYSKGHGVASSHSPAGGI 248
>gi|113426467 PREDICTED: UPF0607 protein ENSP00000381418-like [Homo
sapiens]
Length = 415
Score = 37.4 bits (85), Expect = 0.020
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 47 KDPRVQENPGDQRRVPEVTGDAPSAFRPLRDNGGLSPFVPRPGPLQTDLHAQRSEIRYNQ 106
KD + D +R P G+A S RPL G L+ P L+ ++H +S NQ
Sbjct: 162 KDQVETQGQEDNKRGPCSNGEAASTSRPLETQGNLTSSWYNPRTLEGNVHL-KSLTENNQ 220
Query: 107 T--SQTSWTSSCTNRNAISSSYSSTGGL 132
T +Q S + + ++SS+S GG+
Sbjct: 221 TDKAQVHAVSFYSKGHGVASSHSPAGGI 248
>gi|113426153 PREDICTED: UPF0607 protein ENSP00000381418-like [Homo
sapiens]
Length = 415
Score = 37.4 bits (85), Expect = 0.020
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 47 KDPRVQENPGDQRRVPEVTGDAPSAFRPLRDNGGLSPFVPRPGPLQTDLHAQRSEIRYNQ 106
KD + D +R P G+A S RPL G L+ P L+ ++H +S NQ
Sbjct: 162 KDQVETQGQEDNKRGPCSNGEAASTSRPLETQGNLTSSWYNPRTLEGNVHL-KSLTENNQ 220
Query: 107 T--SQTSWTSSCTNRNAISSSYSSTGGL 132
T +Q S + + ++SS+S GG+
Sbjct: 221 TDKAQVHAVSFYSKGHGVASSHSPAGGI 248
>gi|239755085 PREDICTED: hypothetical protein [Homo sapiens]
Length = 310
Score = 37.0 bits (84), Expect = 0.026
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
Query: 43 PEQDKDPRVQENPGDQRRVPEVTGDAPSAF-----RPLRDNGGLSPFVPRPGPLQTDLHA 97
P R QE P R V E G + R L G LS F PGPL+ +++
Sbjct: 132 PPNKTKVRTQEEP---RAVIEEEGQVETQEQEDKKRALETQGDLSSFRCSPGPLEGNVYP 188
Query: 98 Q-RSEIRYNQTSQTSWTSSCTNRNAISSSYSSTGGLPGLKR 137
+E +Q S SC + + SS+S GG+ LK+
Sbjct: 189 NCLTENNLTDKAQVSPVGSCWEGHVVPSSHSPAGGVLPLKK 229
>gi|239752908 PREDICTED: UPF0607 protein ENSP00000383783-like [Homo
sapiens]
Length = 341
Score = 37.0 bits (84), Expect = 0.026
Identities = 56/225 (24%), Positives = 89/225 (39%), Gaps = 29/225 (12%)
Query: 14 FGVHNTRLSPDLCPGKIVLRALKESGAGMPEQDKDPRVQENPGDQRRVPEVTGDAPSAFR 73
F + L + P ++ ++ + KD + D +R P G+A S
Sbjct: 55 FNLQLPSLDEQVIPARLPKMEVRAEEPKEATEVKDQVETQGQEDNKRGPCSNGEAASTSS 114
Query: 74 PLRDNGGLSPFVPRPGPLQTDLHAQRSEIRYNQT--SQTSWTSSCTNRNAISSSYSSTGG 131
L G L+ P PL+ ++H +S I NQT +Q S + + ++SS+S GG
Sbjct: 115 LLETQGNLTSSWYNPRPLEGNVHL-KSLIEKNQTDKAQVHAVSFYSKDHEVASSHSPAGG 173
Query: 132 ---------LPGLKRRRGPASSHCQL--TLSSSKTVSEDRPQAVSSGHTQCEKAADIAPG 180
LP + P C L ++ K + +D + S D+ P
Sbjct: 174 ILSFGKPDPLPTVLPAPVPG---CSLWPEKAALKVLGKDH---LPSSPGLLMVGEDMQPK 227
Query: 181 QTLTLRND-SSTSEASRPSTHKFPLLPRRRGEP---LMLPPPLEL 221
L + SS S A+ S+HK R+ EP L PPL+L
Sbjct: 228 DPAALGSSRSSPSRAASHSSHK-----RKLSEPPLQLQPTPPLQL 267
>gi|239747457 PREDICTED: UPF0607 protein ENSP00000383783-like [Homo
sapiens]
Length = 341
Score = 37.0 bits (84), Expect = 0.026
Identities = 56/225 (24%), Positives = 89/225 (39%), Gaps = 29/225 (12%)
Query: 14 FGVHNTRLSPDLCPGKIVLRALKESGAGMPEQDKDPRVQENPGDQRRVPEVTGDAPSAFR 73
F + L + P ++ ++ + KD + D +R P G+A S
Sbjct: 55 FNLQLPSLDEQVIPARLPKMEVRAEEPKEATEVKDQVETQGQEDNKRGPCSNGEAASTSS 114
Query: 74 PLRDNGGLSPFVPRPGPLQTDLHAQRSEIRYNQT--SQTSWTSSCTNRNAISSSYSSTGG 131
L G L+ P PL+ ++H +S I NQT +Q S + + ++SS+S GG
Sbjct: 115 LLETQGNLTSSWYNPRPLEGNVHL-KSLIEKNQTDKAQVHAVSFYSKDHEVASSHSPAGG 173
Query: 132 ---------LPGLKRRRGPASSHCQL--TLSSSKTVSEDRPQAVSSGHTQCEKAADIAPG 180
LP + P C L ++ K + +D + S D+ P
Sbjct: 174 ILSFGKPDPLPTVLPAPVPG---CSLWPEKAALKVLGKDH---LPSSPGLLMVGEDMQPK 227
Query: 181 QTLTLRND-SSTSEASRPSTHKFPLLPRRRGEP---LMLPPPLEL 221
L + SS S A+ S+HK R+ EP L PPL+L
Sbjct: 228 DPAALGSSRSSPSRAASHSSHK-----RKLSEPPLQLQPTPPLQL 267
>gi|169176429 PREDICTED: hypothetical protein [Homo sapiens]
Length = 310
Score = 37.0 bits (84), Expect = 0.026
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
Query: 43 PEQDKDPRVQENPGDQRRVPEVTGDAPSAF-----RPLRDNGGLSPFVPRPGPLQTDLHA 97
P R QE P R V E G + R L G LS F PGPL+ +++
Sbjct: 132 PPNKTKVRTQEEP---RAVIEEEGQVETQEQEDKKRALETQGDLSSFRCSPGPLEGNVYP 188
Query: 98 Q-RSEIRYNQTSQTSWTSSCTNRNAISSSYSSTGGLPGLKR 137
+E +Q S SC + + SS+S GG+ LK+
Sbjct: 189 NCLTENNLTDKAQVSPVGSCWEGHVVPSSHSPAGGVLPLKK 229
>gi|239741331 PREDICTED: UPF0607 protein ENSP00000383783-like [Homo
sapiens]
Length = 341
Score = 37.0 bits (84), Expect = 0.026
Identities = 56/225 (24%), Positives = 89/225 (39%), Gaps = 29/225 (12%)
Query: 14 FGVHNTRLSPDLCPGKIVLRALKESGAGMPEQDKDPRVQENPGDQRRVPEVTGDAPSAFR 73
F + L + P ++ ++ + KD + D +R P G+A S
Sbjct: 55 FNLQLPSLDEQVIPARLPKMEVRAEEPKEATEVKDQVETQGQEDNKRGPCSNGEAASTSS 114
Query: 74 PLRDNGGLSPFVPRPGPLQTDLHAQRSEIRYNQT--SQTSWTSSCTNRNAISSSYSSTGG 131
L G L+ P PL+ ++H +S I NQT +Q S + + ++SS+S GG
Sbjct: 115 LLETQGNLTSSWYNPRPLEGNVHL-KSLIEKNQTDKAQVHAVSFYSKDHEVASSHSPAGG 173
Query: 132 ---------LPGLKRRRGPASSHCQL--TLSSSKTVSEDRPQAVSSGHTQCEKAADIAPG 180
LP + P C L ++ K + +D + S D+ P
Sbjct: 174 ILSFGKPDPLPTVLPAPVPG---CSLWPEKAALKVLGKDH---LPSSPGLLMVGEDMQPK 227
Query: 181 QTLTLRND-SSTSEASRPSTHKFPLLPRRRGEP---LMLPPPLEL 221
L + SS S A+ S+HK R+ EP L PPL+L
Sbjct: 228 DPAALGSSRSSPSRAASHSSHK-----RKLSEPPLQLQPTPPLQL 267
>gi|66529407 tensin [Homo sapiens]
Length = 1735
Score = 35.0 bits (79), Expect = 0.099
Identities = 46/171 (26%), Positives = 66/171 (38%), Gaps = 26/171 (15%)
Query: 12 HPFGVHNTRLSPDLCPGKIVLRALKE-----------SGAGMPEQDKDPRVQENPGDQRR 60
HP GV R+ P+ GK+V+R +E + AG QD +P+ P Q
Sbjct: 996 HPTGVTRRRIQPEEDEGKVVVRLSEEPRSYVESVARTAVAGPRAQDSEPKSFSAPATQAY 1055
Query: 61 VPEVTGDAPSAFRPLRDNGGLSPFVPRPGPLQTD---LHAQRSEIRYNQTSQTSWTSSCT 117
E+ PLR NG L P PL T L A + + + ++S T
Sbjct: 1056 GHEI---------PLR-NGTLGGSFVSPSPLSTSSPILSADSTSVGSFPSGESSDQGPRT 1105
Query: 118 NRNAISSSYSSTG--GLPGLKRRRGPASSHCQLTLSSSKTVSEDRPQAVSS 166
+ S +G G P +R SS T+ SS + + Q SS
Sbjct: 1106 PTQPLLESGFRSGSLGQPSPSAQRNYQSSSPLPTVGSSYSSPDYSLQHFSS 1156
Score = 32.7 bits (73), Expect = 0.49
Identities = 49/230 (21%), Positives = 80/230 (34%), Gaps = 15/230 (6%)
Query: 125 SYSSTGGLPGLKRRRGPASSHCQLTLSSSKTVSED---RPQAVSSGHTQCEKAADIAPGQ 181
SYS+ GL G +R GP + Q +S R Q+ S Q A + G
Sbjct: 581 SYSAQEGLAGYQRE-GPHPAWPQPVTTSHYAHDPSGMFRSQSFSEAEPQLPPAP-VRGGS 638
Query: 182 TLTLRNDSSTSEASRPSTHKFPLLPRRRGEPLML-------PPPLELGYRVTVEDLDREK 234
+ S + + P P R+ E L P P L + +
Sbjct: 639 SREAVQRGLNSWQQQQQQQQQPRPPPRQQERAHLESLVASRPSPQPLAETPIPSLPEFPR 698
Query: 235 EAAFQRINSALQVEDKAISDCRPSW---PSHTLSSLATGASGLPAVSKASSMDAQQETHK 291
A+ Q I +++ + + D P+ P H S+ G +S + +++H
Sbjct: 699 AASQQEIEQSIETLNMLMLDLEPASAAAPLHKSQSVPGAWPGASPLSSQPLSGSSRQSHP 758
Query: 292 SQDCLGLLAPLASAAEVPSTAPVSGKKHRPPGPLFSSSDPLPATSSDSQD 341
P + P AP + + PPG +S D P + +QD
Sbjct: 759 LTQSRSGYIPSGHSLGTPEPAPRASLESVPPGRSYSPYDYQPCLAGPNQD 808
>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
Length = 953
Score = 35.0 bits (79), Expect = 0.099
Identities = 61/294 (20%), Positives = 109/294 (37%), Gaps = 24/294 (8%)
Query: 36 KESGAGMPEQDKDPRVQENPGDQRRVPEVTGDAPSAFRPLRDNGGLSPFVPRPGPLQTDL 95
KE G P + P Q P ++ TG +D P+ P + L
Sbjct: 478 KEKGKPKPRSPQPPSRQAEP--PKKEAATTGPQVKRADEWKD-----PWRRSKSP-KKKL 529
Query: 96 HAQRSEIRYNQTSQTSWTSSCTNRNAISSSYSSTGGLPGLKRRRGPASSHCQLTLSSSK- 154
S R + +TS +S+ + ++ SSS SS+ G R R +SS+ + SS+
Sbjct: 530 GVSVSPSRARRRRKTSASSASASNSSRSSSRSSSYSGSGSSRSRSRSSSYSSYSSRSSRH 589
Query: 155 ---TVSEDRPQAVSSGHTQCEKAADIAP-----GQTLTLRNDSSTSEASRPSTHKFPLLP 206
+ S R ++ SS + + P G+ + +P+ P P
Sbjct: 590 SSFSGSRSRSRSFSSSPSPSPTPSPHRPSIRTKGEPAPPPGKAGEKSVKKPAPPPAP--P 647
Query: 207 RRRGEPLMLPPPLELGYRVTVEDLDREKEAAFQRINSALQVEDKAISDCRPSWPSHTLSS 266
+ +P P + G + + ++ R + + S S+ + S
Sbjct: 648 QATKTTAPVPEPTKPG-----DPREARRKERPARTPPRRRTLSGSGSGSGSSYSGSSSRS 702
Query: 267 LATGASGLPAVSKASSMDAQQETHKSQDCLGLLAPLASAAEVPSTAPVSGKKHR 320
+ S + +VS A+S + + S+D LA S+A S AP +K +
Sbjct: 703 RSLSVSSVSSVSSATSSSSSAHSVDSEDMYADLASPVSSASSRSPAPAQTRKEK 756
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.126 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,024,548
Number of Sequences: 37866
Number of extensions: 825995
Number of successful extensions: 3329
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 125
Number of HSP's that attempted gapping in prelim test: 3099
Number of HSP's gapped (non-prelim): 342
length of query: 346
length of database: 18,247,518
effective HSP length: 103
effective length of query: 243
effective length of database: 14,347,320
effective search space: 3486398760
effective search space used: 3486398760
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.