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Search of human proteins with 239757193
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757193 PREDICTED: hypothetical protein [Homo sapiens]
(397 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757193 PREDICTED: hypothetical protein [Homo sapiens] 823 0.0
gi|239751700 PREDICTED: hypothetical protein XP_002347968 [Homo ... 454 e-128
gi|239746204 PREDICTED: hypothetical protein XP_002343661 [Homo ... 410 e-114
gi|55956899 keratin 9 [Homo sapiens] 33 0.35
gi|15718767 TRAAK [Homo sapiens] 33 0.35
gi|148664184 solute carrier family 22, member 10 [Homo sapiens] 31 2.2
gi|52218848 olfactory receptor, family 10, subfamily Q, member 1... 31 2.2
gi|52317194 olfactory receptor, family 2, subfamily D, member 3 ... 30 2.9
gi|153791630 bromodomain and WD repeat domain containing 3 [Homo... 30 2.9
gi|4557595 forkhead box F2 [Homo sapiens] 30 3.8
gi|28376633 klotho beta [Homo sapiens] 30 3.8
gi|239745230 PREDICTED: hypothetical protein XP_002343393 [Homo ... 30 5.0
gi|95089461 discs large homolog 5 [Homo sapiens] 30 5.0
gi|58218998 hypothetical protein LOC340204 [Homo sapiens] 30 5.0
gi|242332527 hypothetical protein LOC65250 [Homo sapiens] 29 6.5
gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain... 29 6.5
gi|58219064 Src homology 2 domain containing E [Homo sapiens] 29 6.5
gi|239754940 PREDICTED: hypothetical protein [Homo sapiens] 29 8.5
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 29 8.5
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 29 8.5
gi|150456449 hexosaminidase (glycosyl hydrolase family 20, catal... 29 8.5
gi|206597470 neural precursor cell expressed, developmentally do... 29 8.5
gi|206597468 neural precursor cell expressed, developmentally do... 29 8.5
gi|23097254 neural precursor cell expressed, developmentally dow... 29 8.5
gi|206597465 neural precursor cell expressed, developmentally do... 29 8.5
gi|39777586 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Homo ... 29 8.5
gi|31791024 keratin associated protein 19-6 [Homo sapiens] 29 8.5
>gi|239757193 PREDICTED: hypothetical protein [Homo sapiens]
Length = 397
Score = 823 bits (2126), Expect = 0.0
Identities = 397/397 (100%), Positives = 397/397 (100%)
Query: 1 MEQAGSALSCWRSESPDCLCGRHEGLHKLTRTLQHKAAGAQGCAVVVELQLRGRQVVQTL 60
MEQAGSALSCWRSESPDCLCGRHEGLHKLTRTLQHKAAGAQGCAVVVELQLRGRQVVQTL
Sbjct: 1 MEQAGSALSCWRSESPDCLCGRHEGLHKLTRTLQHKAAGAQGCAVVVELQLRGRQVVQTL 60
Query: 61 HLQLQELCLLLEQYSESEALWGWKFLARSGHLCRGDGGDLTQAVTFGAGGDSLDGEVVGV 120
HLQLQELCLLLEQYSESEALWGWKFLARSGHLCRGDGGDLTQAVTFGAGGDSLDGEVVGV
Sbjct: 61 HLQLQELCLLLEQYSESEALWGWKFLARSGHLCRGDGGDLTQAVTFGAGGDSLDGEVVGV 120
Query: 121 GGQDEVRPLVVGVAALPLPVGQGHALLPREHLQVRPVHSRLQGHLQAQGRVRGDQYLESA 180
GGQDEVRPLVVGVAALPLPVGQGHALLPREHLQVRPVHSRLQGHLQAQGRVRGDQYLESA
Sbjct: 121 GGQDEVRPLVVGVAALPLPVGQGHALLPREHLQVRPVHSRLQGHLQAQGRVRGDQYLESA 180
Query: 181 VTMAVSPTSMSGTLRSRAWARTWMTSQSPRVNTSSGSSCTRVPFSSDVCRCTVTTWPLTG 240
VTMAVSPTSMSGTLRSRAWARTWMTSQSPRVNTSSGSSCTRVPFSSDVCRCTVTTWPLTG
Sbjct: 181 VTMAVSPTSMSGTLRSRAWARTWMTSQSPRVNTSSGSSCTRVPFSSDVCRCTVTTWPLTG 240
Query: 241 RLEPGGPGTSVFFLNSPFPARNVQPLFWGRGWGGLGLHGSKELSGQGPRLLSLLRRGLSH 300
RLEPGGPGTSVFFLNSPFPARNVQPLFWGRGWGGLGLHGSKELSGQGPRLLSLLRRGLSH
Sbjct: 241 RLEPGGPGTSVFFLNSPFPARNVQPLFWGRGWGGLGLHGSKELSGQGPRLLSLLRRGLSH 300
Query: 301 VLQRWQLTQVILFLLFLLLFLLTLCILNPIQYLEVLERWDPGGQWGRGLRGFSTRCHAAG 360
VLQRWQLTQVILFLLFLLLFLLTLCILNPIQYLEVLERWDPGGQWGRGLRGFSTRCHAAG
Sbjct: 301 VLQRWQLTQVILFLLFLLLFLLTLCILNPIQYLEVLERWDPGGQWGRGLRGFSTRCHAAG 360
Query: 361 GTGIGPGSGGQRCGSESYAAPQSLHCTDSPHCRSLSV 397
GTGIGPGSGGQRCGSESYAAPQSLHCTDSPHCRSLSV
Sbjct: 361 GTGIGPGSGGQRCGSESYAAPQSLHCTDSPHCRSLSV 397
>gi|239751700 PREDICTED: hypothetical protein XP_002347968 [Homo
sapiens]
Length = 215
Score = 454 bits (1169), Expect = e-128
Identities = 215/215 (100%), Positives = 215/215 (100%)
Query: 183 MAVSPTSMSGTLRSRAWARTWMTSQSPRVNTSSGSSCTRVPFSSDVCRCTVTTWPLTGRL 242
MAVSPTSMSGTLRSRAWARTWMTSQSPRVNTSSGSSCTRVPFSSDVCRCTVTTWPLTGRL
Sbjct: 1 MAVSPTSMSGTLRSRAWARTWMTSQSPRVNTSSGSSCTRVPFSSDVCRCTVTTWPLTGRL 60
Query: 243 EPGGPGTSVFFLNSPFPARNVQPLFWGRGWGGLGLHGSKELSGQGPRLLSLLRRGLSHVL 302
EPGGPGTSVFFLNSPFPARNVQPLFWGRGWGGLGLHGSKELSGQGPRLLSLLRRGLSHVL
Sbjct: 61 EPGGPGTSVFFLNSPFPARNVQPLFWGRGWGGLGLHGSKELSGQGPRLLSLLRRGLSHVL 120
Query: 303 QRWQLTQVILFLLFLLLFLLTLCILNPIQYLEVLERWDPGGQWGRGLRGFSTRCHAAGGT 362
QRWQLTQVILFLLFLLLFLLTLCILNPIQYLEVLERWDPGGQWGRGLRGFSTRCHAAGGT
Sbjct: 121 QRWQLTQVILFLLFLLLFLLTLCILNPIQYLEVLERWDPGGQWGRGLRGFSTRCHAAGGT 180
Query: 363 GIGPGSGGQRCGSESYAAPQSLHCTDSPHCRSLSV 397
GIGPGSGGQRCGSESYAAPQSLHCTDSPHCRSLSV
Sbjct: 181 GIGPGSGGQRCGSESYAAPQSLHCTDSPHCRSLSV 215
>gi|239746204 PREDICTED: hypothetical protein XP_002343661 [Homo
sapiens]
Length = 194
Score = 410 bits (1054), Expect = e-114
Identities = 193/194 (99%), Positives = 193/194 (99%)
Query: 204 MTSQSPRVNTSSGSSCTRVPFSSDVCRCTVTTWPLTGRLEPGGPGTSVFFLNSPFPARNV 263
MTSQSPRVNTSSGSSCTRVPFSSDVCRCTVTTWPLTGRLEPGGPGTSVFFLNSPFPARNV
Sbjct: 1 MTSQSPRVNTSSGSSCTRVPFSSDVCRCTVTTWPLTGRLEPGGPGTSVFFLNSPFPARNV 60
Query: 264 QPLFWGRGWGGLGLHGSKELSGQGPRLLSLLRRGLSHVLQRWQLTQVILFLLFLLLFLLT 323
QPLFWGRGWGGLGLHGSKELSGQGPRLLSLLRRGLSHVLQRWQLTQVILFLLFLLLFLLT
Sbjct: 61 QPLFWGRGWGGLGLHGSKELSGQGPRLLSLLRRGLSHVLQRWQLTQVILFLLFLLLFLLT 120
Query: 324 LCILNPIQYLEVLERWDPGGQWGRGLRGFSTRCHAAGGTGIGPGSGGQRCGSESYAAPQS 383
LCILNPIQYLEVLERWDPGGQWGRGLRGFSTRCHAAGGTGIGPGSGGQRCGSESY APQS
Sbjct: 121 LCILNPIQYLEVLERWDPGGQWGRGLRGFSTRCHAAGGTGIGPGSGGQRCGSESYTAPQS 180
Query: 384 LHCTDSPHCRSLSV 397
LHCTDSPHCRSLSV
Sbjct: 181 LHCTDSPHCRSLSV 194
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 33.5 bits (75), Expect = 0.35
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 338 RWDPGGQWGRGLRGFSTRCHAAGGTGIGPGSG-GQRCGS 375
R GG +GRG RG S + GG+G G G G G R GS
Sbjct: 478 RGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGS 516
>gi|15718767 TRAAK [Homo sapiens]
Length = 393
Score = 33.5 bits (75), Expect = 0.35
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 283 LSGQGPRLLSLLRRGLSH---VLQRWQLTQVILFLLFLLLFLLTLCIL 327
L+G G RL S LR G+ H + +W + ++ +L +LFLL C+L
Sbjct: 135 LAGVGDRLGSSLRHGIGHIEAIFLKWHVPPELVRVLSAMLFLLIGCLL 182
>gi|148664184 solute carrier family 22, member 10 [Homo sapiens]
Length = 541
Score = 30.8 bits (68), Expect = 2.2
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 297 GLSHVLQRWQLTQVILFLLFLLLFLLTLCILNPIQYLEVLERWDPG 342
GL++V + WQ V+ + F + FLL+ ++ ++L + + D G
Sbjct: 250 GLAYVFRDWQTLHVVASVPFFVFFLLSRWLVESARWLIITNKLDEG 295
>gi|52218848 olfactory receptor, family 10, subfamily Q, member 1
[Homo sapiens]
Length = 319
Score = 30.8 bits (68), Expect = 2.2
Identities = 13/17 (76%), Positives = 16/17 (94%)
Query: 309 QVILFLLFLLLFLLTLC 325
QV+LFLLFLLL+L+ LC
Sbjct: 28 QVLLFLLFLLLYLMILC 44
>gi|52317194 olfactory receptor, family 2, subfamily D, member 3
[Homo sapiens]
Length = 330
Score = 30.4 bits (67), Expect = 2.9
Identities = 15/28 (53%), Positives = 22/28 (78%), Gaps = 4/28 (14%)
Query: 297 GLSHVLQRWQLTQVILFLLFLLLFLLTL 324
GLS LQ TQ++LF+LFL+++LLT+
Sbjct: 32 GLSQDLQ----TQILLFILFLIIYLLTV 55
>gi|153791630 bromodomain and WD repeat domain containing 3 [Homo
sapiens]
Length = 1802
Score = 30.4 bits (67), Expect = 2.9
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 338 RWDPGGQW-----GRGLRGFSTRCHAAGGT-GIGPGSGGQ 371
RW G+W GRG RG +R GGT G G G GG+
Sbjct: 1675 RWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRGRGGR 1714
>gi|4557595 forkhead box F2 [Homo sapiens]
Length = 444
Score = 30.0 bits (66), Expect = 3.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 353 STRCHAAGGTGIGPGSGGQRCGSESYAAPQ 382
S C +AGG G G GSGG + S P+
Sbjct: 70 SAACKSAGGGGAGAGSGGAKKASSGLRRPE 99
>gi|28376633 klotho beta [Homo sapiens]
Length = 1044
Score = 30.0 bits (66), Expect = 3.8
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 250 SVFFLNSPFPARNVQPLFWGRGWGGLGLHGSKELSGQGPRL 290
S FL FP FWG G G L + GS + G+GP +
Sbjct: 73 SQLFLYDTFPKN----FFWGIGTGALQVEGSWKKDGKGPSI 109
>gi|239745230 PREDICTED: hypothetical protein XP_002343393 [Homo
sapiens]
Length = 122
Score = 29.6 bits (65), Expect = 5.0
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 348 GLRGFSTRCHAAGGTGIGPGSGGQRCGSESYAAPQSLHCTDSPHCR 393
G R T C GG +GP GG G A Q +H ++P CR
Sbjct: 15 GNRRTKTICPFPGGMQLGPSQGGSSRG----ALEQLMHGYNAPFCR 56
>gi|95089461 discs large homolog 5 [Homo sapiens]
Length = 1919
Score = 29.6 bits (65), Expect = 5.0
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 238 LTGRLEPGGPGTSVFFLNSPFPARNVQ 264
L R EPG PG S FL+ PFP +Q
Sbjct: 852 LEDRKEPGPPGGSSSFLHKPFPGGPLQ 878
>gi|58218998 hypothetical protein LOC340204 [Homo sapiens]
Length = 121
Score = 29.6 bits (65), Expect = 5.0
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Query: 301 VLQRWQLTQVILFLLFLLLFLLTLCILNPIQY 332
+L +W L +LFLLF LFLLT L+P +Y
Sbjct: 2 MLPQWLL---LLFLLFFFLFLLTRGSLSPTKY 30
>gi|242332527 hypothetical protein LOC65250 [Homo sapiens]
Length = 3197
Score = 29.3 bits (64), Expect = 6.5
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 28 KLTRTLQHKAAGAQG--CAVVVELQLRGRQVVQTLHLQL--QELCLLLEQYSESEALW 81
+LT + H+A+ + C + LQ G + QTL L+ E C LL Y +S LW
Sbjct: 793 QLTEKMTHEASTVKSLLCHLQANLQSTGDCLNQTLELKSINGEECFLLGSYEKSVQLW 850
>gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain
and proline-rich containing [Homo sapiens]
Length = 1435
Score = 29.3 bits (64), Expect = 6.5
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 38 AGAQGCAVVVELQLRGRQVVQTLHLQLQELCLLLEQYSESEALW--GWKF---LARSGHL 92
AG QG A V + + +Q + L L +L E S W G K L + G +
Sbjct: 748 AGPQGEAAVRQAE----DAIQNANFSLSILPILYEAGSSPSHHWQLGQKLEGLLRQVGEV 803
Query: 93 CRGDGGDLTQAVTFGAGGDSLDGEVVGVGGQDEVRPLVVGVAALPLPVGQGHALLPREHL 152
CR D D TQA T + G ++++ ++ G LP LLP + L
Sbjct: 804 CRQDIQDFTQA-TLDTARSLCPQMLQGSSWREQLEGVLAGSRGLP-------ELLPEQLL 855
Query: 153 Q 153
Q
Sbjct: 856 Q 856
>gi|58219064 Src homology 2 domain containing E [Homo sapiens]
Length = 495
Score = 29.3 bits (64), Expect = 6.5
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Query: 329 PIQYLEVLERWDPGGQWGRGLRGFSTRCHAAGGTGIGPGSGGQRCGSE 376
P+ V ER PGG G+ LR S AGG G GPG G + +E
Sbjct: 46 PLNLKTVSERAKPGGGGGK-LRKNSE----AGGAGPGPGKGRKNSAAE 88
>gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 28.9 bits (63), Expect = 8.5
Identities = 29/87 (33%), Positives = 32/87 (36%), Gaps = 15/87 (17%)
Query: 87 ARSGHLCRGDGGDLTQAVTFGA-GGDSLDGEVVGVGGQDEVRPLVVGVAALPLPVGQGHA 145
AR G RG G V G GG L G + V G D +RP H
Sbjct: 8 ARFGAAVRGGGAGRRVRVGVGEPGGFCLPGPALVVAGLDGIRPAPAA----------AHP 57
Query: 146 LLPREHLQVRPVHSRLQGHLQAQGRVR 172
PRE RP +RL AQ R R
Sbjct: 58 PAPRE----RPAAARLSALAAAQPRRR 80
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 28.9 bits (63), Expect = 8.5
Identities = 29/87 (33%), Positives = 32/87 (36%), Gaps = 15/87 (17%)
Query: 87 ARSGHLCRGDGGDLTQAVTFGA-GGDSLDGEVVGVGGQDEVRPLVVGVAALPLPVGQGHA 145
AR G RG G V G GG L G + V G D +RP H
Sbjct: 8 ARFGAAVRGGGAGRRVRVGVGEPGGFCLPGPALVVAGLDGIRPAPAA----------AHP 57
Query: 146 LLPREHLQVRPVHSRLQGHLQAQGRVR 172
PRE RP +RL AQ R R
Sbjct: 58 PAPRE----RPAAARLSALAAAQPRRR 80
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 28.9 bits (63), Expect = 8.5
Identities = 29/87 (33%), Positives = 32/87 (36%), Gaps = 15/87 (17%)
Query: 87 ARSGHLCRGDGGDLTQAVTFGA-GGDSLDGEVVGVGGQDEVRPLVVGVAALPLPVGQGHA 145
AR G RG G V G GG L G + V G D +RP H
Sbjct: 8 ARFGAAVRGGGAGRRVRVGVGEPGGFCLPGPALVVAGLDGIRPAPAA----------AHP 57
Query: 146 LLPREHLQVRPVHSRLQGHLQAQGRVR 172
PRE RP +RL AQ R R
Sbjct: 58 PAPRE----RPAAARLSALAAAQPRRR 80
>gi|150456449 hexosaminidase (glycosyl hydrolase family 20,
catalytic domain) containing [Homo sapiens]
Length = 585
Score = 28.9 bits (63), Expect = 8.5
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 9/110 (8%)
Query: 117 VVGVGGQDEVRPLVVGVAALPLPVGQGHALLPREHLQVRPVHSRLQGHLQAQGRVRGDQY 176
++G+ ++ P+ + P P LLP RP L A GR
Sbjct: 341 LLGISSLEKTDPVRQAPCSPPCP------LLPLPF--PRPWRQLFSAGLSA-GRGPAPSL 391
Query: 177 LESAVTMAVSPTSMSGTLRSRAWARTWMTSQSPRVNTSSGSSCTRVPFSS 226
+++ ++ S+ L R W T M+ T+SGSS TR FS+
Sbjct: 392 AATSLPLSHKSASICAALWMRCWRATGMSLAGSAPTTASGSSSTRSWFST 441
>gi|206597470 neural precursor cell expressed, developmentally
down-regulated 1 isoform c [Homo sapiens]
Length = 571
Score = 28.9 bits (63), Expect = 8.5
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 46 VVELQLRGRQVVQTLHLQLQELCLLLEQYSESEAL 80
+V LQ+ ++++ H+QL E+ LLE+YS +E L
Sbjct: 522 IVNLQV---EMIKQFHMQLNEMHSLLERYSVNEGL 553
>gi|206597468 neural precursor cell expressed, developmentally
down-regulated 1 isoform b [Homo sapiens]
Length = 660
Score = 28.9 bits (63), Expect = 8.5
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 46 VVELQLRGRQVVQTLHLQLQELCLLLEQYSESEAL 80
+V LQ+ ++++ H+QL E+ LLE+YS +E L
Sbjct: 611 IVNLQV---EMIKQFHMQLNEMHSLLERYSVNEGL 642
>gi|23097254 neural precursor cell expressed, developmentally
down-regulated 1 isoform b [Homo sapiens]
Length = 660
Score = 28.9 bits (63), Expect = 8.5
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 46 VVELQLRGRQVVQTLHLQLQELCLLLEQYSESEAL 80
+V LQ+ ++++ H+QL E+ LLE+YS +E L
Sbjct: 611 IVNLQV---EMIKQFHMQLNEMHSLLERYSVNEGL 642
>gi|206597465 neural precursor cell expressed, developmentally
down-regulated 1 isoform a [Homo sapiens]
Length = 667
Score = 28.9 bits (63), Expect = 8.5
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 46 VVELQLRGRQVVQTLHLQLQELCLLLEQYSESEAL 80
+V LQ+ ++++ H+QL E+ LLE+YS +E L
Sbjct: 618 IVNLQV---EMIKQFHMQLNEMHSLLERYSVNEGL 649
>gi|39777586 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Homo
sapiens]
Length = 1386
Score = 28.9 bits (63), Expect = 8.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 346 GRGLRGFSTRCHAAGGTGIGPGSGG 370
GRG R +++ H +GG G G G GG
Sbjct: 23 GRGGRSHASKSHGSGGGGGGGGGGG 47
>gi|31791024 keratin associated protein 19-6 [Homo sapiens]
Length = 58
Score = 28.9 bits (63), Expect = 8.5
Identities = 14/31 (45%), Positives = 15/31 (48%)
Query: 345 WGRGLRGFSTRCHAAGGTGIGPGSGGQRCGS 375
+G RG C GG G G G GG R GS
Sbjct: 4 YGSYYRGLGYGCGGFGGLGYGCGCGGYRYGS 34
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,549,228
Number of Sequences: 37866
Number of extensions: 900350
Number of successful extensions: 3180
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 3147
Number of HSP's gapped (non-prelim): 40
length of query: 397
length of database: 18,247,518
effective HSP length: 104
effective length of query: 293
effective length of database: 14,309,454
effective search space: 4192670022
effective search space used: 4192670022
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.