| Name: C5orf42 | Sequence: fasta or formatted (3197aa) | NCBI GI: 242332527 | |
|
Description: hypothetical protein LOC65250
| Not currently referenced in the text | ||
|
Composition:
Amino acid Percentage Count Longest homopolymer A alanine 5.1 163 2 C cysteine 2.1 66 2 D aspartate 4.5 145 3 E glutamate 7.5 240 4 F phenylalanine 4.1 132 2 G glycine 4.5 145 2 H histidine 3.0 95 2 I isoleucine 5.5 176 2 K lysine 6.9 221 3 L leucine 10.7 342 3 M methionine 2.0 64 2 N asparagine 4.2 135 2 P proline 6.0 193 2 Q glutamine 5.9 189 3 R arginine 4.4 142 3 S serine 9.7 310 4 T threonine 4.9 156 2 V valine 5.3 170 2 W tryptophan 1.3 43 1 Y tyrosine 2.2 70 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 hypothetical protein LOC65250 LOC100292617 0.047 PREDICTED: similar to Transmembrane protein ENSP000... LOC100290042 0.047 PREDICTED: hypothetical protein XP_002346719 GRIPAP1 0.003 GRIP1 associated protein 1 isoform 2 GRIPAP1 0.003 GRIP1 associated protein 1 isoform 1 SMARCA2 0.002 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.002 SWI/SNF-related matrix-associated actin-dependent re... ASXL3 0.002 additional sex combs like 3 MAP4K4 0.002 mitogen-activated protein kinase kinase kinase kinas... C3orf36 0.002 hypothetical protein LOC80111 FIG4 0.002 Sac domain-containing inositol phosphatase 3 JMJD1C 0.002 jumonji domain containing 1C isoform a JMJD1C 0.002 jumonji domain containing 1C isoform b POU6F2 0.002 POU domain, class 6, transcription factor 2 GIGYF2 0.002 GRB10 interacting GYF protein 2 isoform c GIGYF2 0.002 GRB10 interacting GYF protein 2 isoform a GIGYF2 0.002 GRB10 interacting GYF protein 2 isoform b GIGYF2 0.002 GRB10 interacting GYF protein 2 isoform b KIAA1429 0.002 hypothetical protein LOC25962 isoform 1 LOC100289089 0.002 PREDICTED: hypothetical protein XP_002343359 MLL2 0.002 myeloid/lymphoid or mixed-lineage leukemia 2 SFRS17A 0.002 DNA segment on chromosome X and Y (unique) 155 expre... SMG7 0.002 SMG-7 homolog isoform 1 SMG7 0.002 SMG-7 homolog isoform 4 SMG7 0.002 SMG-7 homolog isoform 2 ATF7IP 0.002 activating transcription factor 7 interacting protei... C9orf86 0.002 Rab-like GTP-binding protein 1 isoform 1 NES 0.002 nestin MED13L 0.002 mediator complex subunit 13-like MAGEC1 0.002 melanoma antigen family C, 1Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
