Guide to the Human Genome
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Name: SHE Sequence: fasta or formatted (495aa) NCBI GI: 58219064
Description:

Src homology 2 domain containing E

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         43           3
 C cysteine            1.2          6           1
 D aspartate           4.2         21           1
 E glutamate           8.1         40           3
 F phenylalanine       1.2          6           1
 G glycine             9.3         46           5
 H histidine           2.0         10           2
 I isoleucine          3.2         16           2
 K lysine              8.3         41           2
 L leucine             7.9         39           2
 M methionine          1.0          5           1
 N asparagine          2.8         14           1
 P proline             7.5         37           2
 Q glutamine           4.4         22           2
 R arginine            6.7         33           3
 S serine             11.3         56          12
 T threonine           4.0         20           1
 V valine              3.4         17           2
 W tryptophan          1.4          7           1
 Y tyrosine            3.2         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Src homology 2 domain containing E 
SHF                   0.228   Src homology 2 domain containing F 
SHB                   0.208   Src homology 2 domain containing adaptor protein B ...
SHD                   0.180   Src homology 2 domain containing transforming prote...
ABL2                  0.033   arg tyrosine kinase isoform c 
ABL2                  0.033   arg tyrosine kinase isoform b 
ABL2                  0.033   arg tyrosine kinase isoform e 
ABL2                  0.033   arg tyrosine kinase isoform d 
ABL2                  0.033   arg tyrosine kinase isoform a 
PLCG2                 0.032   phospholipase C, gamma 2 
ABL1                  0.030   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.030   c-abl oncogene 1, receptor tyrosine kinase isoform b...
SH2D7                 0.030   SH2 domain containing 7 
FER                   0.029   fer (fps/fes related) tyrosine kinase 
NCK2                  0.028   NCK adaptor protein 2 isoform A 
NCK2                  0.028   NCK adaptor protein 2 isoform A 
PTK6                  0.027   PTK6 protein tyrosine kinase 6 
VAV3                  0.026   vav 3 guanine nucleotide exchange factor isoform 2 ...
VAV3                  0.026   vav 3 guanine nucleotide exchange factor isoform 1 ...
MATK                  0.026   megakaryocyte-associated tyrosine kinase isoform c [...
MATK                  0.026   megakaryocyte-associated tyrosine kinase isoform b [...
MATK                  0.026   megakaryocyte-associated tyrosine kinase isoform a [...
DACH1                 0.026   dachshund homolog 1 isoform b 
DACH1                 0.026   dachshund homolog 1 isoform a 
DACH1                 0.026   dachshund homolog 1 isoform c 
FES                   0.025   feline sarcoma oncogene isoform 2 
FES                   0.025   feline sarcoma oncogene isoform 1 
SHC3                  0.025   src homology 2 domain-containing transforming prote...
SH2D2A                0.025   SH2 domain protein 2A isoform 4 
SH2D2A                0.025   SH2 domain protein 2A isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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