Guide to the Human Genome
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Name: TBC1D27 Sequence: fasta or formatted (617aa) NCBI GI: 239751241
Description:

PREDICTED: TBC1 domain family, member 27

Not currently referenced in the text

Other entries for this name:
alt prot {339aa} PREDICTED: TBC1 domain family, member 27
alt prot {339aa} PREDICTED: TBC1 domain family, member 27
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         36           2
 C cysteine            3.4         21           2
 D aspartate           3.6         22           1
 E glutamate           5.0         31           2
 F phenylalanine       3.1         19           2
 G glycine             7.8         48           3
 H histidine           2.9         18           1
 I isoleucine          2.6         16           3
 K lysine              4.2         26           2
 L leucine            13.3         82           2
 M methionine          2.6         16           1
 N asparagine          1.9         12           1
 P proline             8.1         50           2
 Q glutamine           4.9         30           2
 R arginine            6.2         38           3
 S serine              9.9         61           2
 T threonine           5.2         32           2
 V valine              5.2         32           3
 W tryptophan          3.1         19           1
 X unknown             0.2          1           1
 Y tyrosine            1.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: TBC1 domain family, member 27 
TBC1D27               0.362   PREDICTED: TBC1 domain family, member 27 
TBC1D27               0.359   PREDICTED: TBC1 domain family, member 27 
USP6                  0.088   ubiquitin specific protease 6 
TBC1D3H               0.083   TBC1 domain family, member 3H 
TBC1D3D               0.083   TBC1 domain family, member 3D 
TBC1D3G               0.083   TBC1 domain family, member 3G 
TBC1D3F               0.083   TBC1 domain family, member 3F 
TBC1D3                0.083   TBC1 domain family, member 3 
TBC1D3E               0.083   TBC1 domain family, member 3E 
TBC1D3C               0.081   TBC1 domain family member 3C 
TBC1D3B               0.079   TBC1 domain family, member 3B 
USP6NL                0.077   USP6 N-terminal like isoform 1 
USP6NL                0.077   USP6 N-terminal like isoform 2 
TBC1D29               0.027   TBC1 domain family, member 29 
TBC1D28               0.023   TBC1 domain family, member 28 
LOC100292664          0.021   PREDICTED: similar to TBC1 domain family, member 28...
TBC1D2B               0.018   TBC1 domain family, member 2B isoform a 
TBC1D2B               0.018   TBC1 domain family, member 2B isoform b 
TBC1D26               0.017   TBC1 domain family, member 26 
LOC100287742          0.017   PREDICTED: hypothetical protein XP_002343595 
LOC100134348          0.016   PREDICTED: similar to TBC1 domain family, member 3 ...
TBC1D14               0.014   TBC1 domain family, member 14 isoform b 
TBC1D14               0.014   TBC1 domain family, member 14 isoform a 
TBC1D14               0.014   TBC1 domain family, member 14 isoform a 
LOC100293000          0.013   PREDICTED: similar to hCG1991532 
SGSM3                 0.011   small G protein signaling modulator 3 
SOBP                  0.011   sine oculis binding protein homolog 
TBC1D2                0.010   TBC1 domain family, member 2 
TBC1D12               0.008   TBC1 domain family, member 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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