Search of human proteins with 119395716

Search of human proteins with 119395716

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|119395716 forkhead box C1 [Homo sapiens]
         (553 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|119395716 forkhead box C1 [Homo sapiens]                          1137   0.0  
gi|4885237 forkhead box C2 [Homo sapiens]                             443   e-124
gi|28973785 forkhead box S1 [Homo sapiens]                            196   4e-50
gi|134142824 forkhead box D2 [Homo sapiens]                           190   3e-48
gi|22779860 forkhead box L1 [Homo sapiens]                            190   3e-48
gi|6912372 forkhead box D3 [Homo sapiens]                             187   2e-47
gi|4758392 forkhead box D1 [Homo sapiens]                             186   5e-47
gi|11386197 forkhead box E3 [Homo sapiens]                            179   5e-45
gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]                  178   1e-44
gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]                 178   1e-44
gi|21618325 forkhead box E1 [Homo sapiens]                            177   2e-44
gi|24497501 forkhead box A1 [Homo sapiens]                            177   3e-44
gi|18959276 forkhead box D4-like 1 [Homo sapiens]                     172   9e-43
gi|75677594 forkhead box D4 [Homo sapiens]                            170   3e-42
gi|195947376 forkhead box I2 [Homo sapiens]                           170   4e-42
gi|24497506 forkhead box A3 [Homo sapiens]                            167   2e-41
gi|12751477 forkhead box L2 [Homo sapiens]                            167   3e-41
gi|21618327 forkhead box I1 isoform a [Homo sapiens]                  166   5e-41
gi|208431824 forkhead box I3 [Homo sapiens]                           166   5e-41
gi|187423902 forkhead box D4-like 5 [Homo sapiens]                    163   4e-40
gi|149944560 forkhead box D4-like 2 [Homo sapiens]                    162   6e-40
gi|76880472 forkhead box D4-like 4 [Homo sapiens]                     162   6e-40
gi|157042770 forkhead box D4-like 3 [Homo sapiens]                    160   4e-39
gi|146262007 forkhead box D4-like 6 [Homo sapiens]                    159   5e-39
gi|105554437 forkhead box B1 [Homo sapiens]                           159   6e-39
gi|61966923 forkhead box B2 [Homo sapiens]                            158   1e-38
gi|4557595 forkhead box F2 [Homo sapiens]                             153   5e-37
gi|110735445 forkhead box F1 [Homo sapiens]                           150   3e-36
gi|32307177 forkhead box G1 [Homo sapiens]                            142   1e-33
gi|169171269 PREDICTED: similar to forkhead box L2 [Homo sapiens]     141   1e-33

>gi|119395716 forkhead box C1 [Homo sapiens]
          Length = 553

 Score = 1137 bits (2942), Expect = 0.0
 Identities = 553/553 (100%), Positives = 553/553 (100%)

Query: 1   MQARYSVSSPNSLGVVPYLGGEQSYYRAAAAAAGGGYTAMPAPMSVYSHPAHAEQYPGGM 60
           MQARYSVSSPNSLGVVPYLGGEQSYYRAAAAAAGGGYTAMPAPMSVYSHPAHAEQYPGGM
Sbjct: 1   MQARYSVSSPNSLGVVPYLGGEQSYYRAAAAAAGGGYTAMPAPMSVYSHPAHAEQYPGGM 60

Query: 61  ARAYGPYTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQ 120
           ARAYGPYTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQ
Sbjct: 61  ARAYGPYTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQ 120

Query: 121 GWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAV 180
           GWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAV
Sbjct: 121 GWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAV 180

Query: 181 KDKEEKDRLHLKEPPPPGRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPL 240
           KDKEEKDRLHLKEPPPPGRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPL
Sbjct: 181 KDKEEKDRLHLKEPPPPGRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPL 240

Query: 241 SPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAP 300
           SPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAP
Sbjct: 241 SPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAP 300

Query: 301 PPHHSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPLALGAYSPGQSSL 360
           PPHHSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPLALGAYSPGQSSL
Sbjct: 301 PPHHSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPLALGAYSPGQSSL 360

Query: 361 YSSPCSQTSSAGSSGGGGGGAGAAGGAGGAGTYHCNLQAMSLYAAGERGGHLQGAPGGAG 420
           YSSPCSQTSSAGSSGGGGGGAGAAGGAGGAGTYHCNLQAMSLYAAGERGGHLQGAPGGAG
Sbjct: 361 YSSPCSQTSSAGSSGGGGGGAGAAGGAGGAGTYHCNLQAMSLYAAGERGGHLQGAPGGAG 420

Query: 421 GSAVDDPLPDYSLPPVTSSSSSSLSHGGGGGGGGGGQEAGHHPAAHQGRLTSWYLNQAGG 480
           GSAVDDPLPDYSLPPVTSSSSSSLSHGGGGGGGGGGQEAGHHPAAHQGRLTSWYLNQAGG
Sbjct: 421 GSAVDDPLPDYSLPPVTSSSSSSLSHGGGGGGGGGGQEAGHHPAAHQGRLTSWYLNQAGG 480

Query: 481 DLGHLASAAAAAAAAGYPGQQQNFHSVREMFESQRIGLNNSPVNGNSSCQMAFPSSQSLY 540
           DLGHLASAAAAAAAAGYPGQQQNFHSVREMFESQRIGLNNSPVNGNSSCQMAFPSSQSLY
Sbjct: 481 DLGHLASAAAAAAAAGYPGQQQNFHSVREMFESQRIGLNNSPVNGNSSCQMAFPSSQSLY 540

Query: 541 RTSGAFVYDCSKF 553
           RTSGAFVYDCSKF
Sbjct: 541 RTSGAFVYDCSKF 553


>gi|4885237 forkhead box C2 [Homo sapiens]
          Length = 501

 Score =  443 bits (1139), Expect = e-124
 Identities = 286/586 (48%), Positives = 339/586 (57%), Gaps = 118/586 (20%)

Query: 1   MQARYSVSSPNSLGVVPYLGGEQSYYRAAAAAAGGGYTAMPAPMSVYSHPAHAEQYPGGM 60
           MQARYSVS PN+LGVVPYL  EQ+YYRAA     G Y  M +PM VYS   H EQY  GM
Sbjct: 1   MQARYSVSDPNALGVVPYLS-EQNYYRAA-----GSYGGMASPMGVYS--GHPEQYSAGM 52

Query: 61  ARAYGPYTP-QPQ-PKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDN 118
            R+Y PY   QP  PKD+VKPPYSYIALITMAIQNAP+KKITLNGIYQFIMDRFPFYR+N
Sbjct: 53  GRSYAPYHHHQPAAPKDLVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYREN 112

Query: 119 KQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKD 178
           KQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKD
Sbjct: 113 KQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKD 172

Query: 179 AVKDKEEKDRLHLKEPPPPGRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSP-- 236
             K+KEE  R HLKEPPP   +  PA P  AD     P+    ++  IK+E  +   P  
Sbjct: 173 VSKEKEE--RAHLKEPPPAASKGAPATPHLAD----APKEAEKKVV-IKSEAASPALPVI 225

Query: 237 --PQPLSPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPP 294
              + LSP +AL            SP S++S  +   SP GSLP                
Sbjct: 226 TKVETLSPESALQG----------SPRSAAS--TPAGSPDGSLPEHH------------- 260

Query: 295 PAPSAPPPHHSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAAASSRAG-IAPPLALGAY 353
               A  P+   GFSV+NIMT LR SP     ELS G       + RAG + PPLAL  Y
Sbjct: 261 ----AAAPNGLPGFSVENIMT-LRTSP--PGGELSPG-------AGRAGLVVPPLAL-PY 305

Query: 354 SPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAGGAGTYHCNLQAMSLYAAGERGGHLQ 413
           +    + Y  PC+Q   AG++GG                Y C+++AMSLY   ER  H+ 
Sbjct: 306 AAAPPAAYGQPCAQGLEAGAAGG----------------YQCSMRAMSLYTGAERPAHMC 349

Query: 414 GAPGGAGGSAVDDPLPDYSLPPVTSSSSSSLSHGGGGGGGGGG---QEAGHH-------- 462
             P      A+D+ L D+   P +  S+ +L+ G  G     G   Q  GHH        
Sbjct: 350 VPP------ALDEALSDHPSGPTSPLSALNLAAGQEGALAATGHHHQHHGHHHPQAPPPP 403

Query: 463 ----------PAAHQGRLTSWYLNQAGGDLGHLASAAAAAAAAGYPGQQQNFHSVREMFE 512
                     P A   +  SWYLN + GDL HL     AA       QQQ F +VREMF 
Sbjct: 404 PAPQPQPTPQPGAAAAQAASWYLNHS-GDLNHLPGHTFAA-------QQQTFPNVREMFN 455

Query: 513 SQRIGLNN-----SPVNGNSSCQMAFPSSQSLYRTSGAFVYDCSKF 553
           S R+G+ N     S V+GN+SCQ+ + S+  LYR +  + YDC+K+
Sbjct: 456 SHRLGIENSTLGESQVSGNASCQLPYRSTPPLYRHAAPYSYDCTKY 501


>gi|28973785 forkhead box S1 [Homo sapiens]
          Length = 330

 Score =  196 bits (499), Expect = 4e-50
 Identities = 124/278 (44%), Positives = 155/278 (55%), Gaps = 44/278 (15%)

Query: 65  GPYTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQN 124
           GP  P  +P    KPPYSYIALI MAIQ++P ++ TL+GIY++IM RF FYR N+ GWQN
Sbjct: 8   GPGAPTTEP---TKPPYSYIALIAMAIQSSPGQRATLSGIYRYIMGRFAFYRHNRPGWQN 64

Query: 125 SIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKK-------K 177
           SIRHNLSLNECFVKVPRDD+KPGKGSYWTLDPD ++MFE+GSFLRRRRRF +       +
Sbjct: 65  SIRHNLSLNECFVKVPRDDRKPGKGSYWTLDPDCHDMFEHGSFLRRRRRFTRQTGAEGTR 124

Query: 178 DAVKDKEEKDRLHLKEPPPP----GRQ---PP--PAPPEQADGNAPGPQP---------- 218
              K +    R   ++P  P    GRQ   PP  P P   + G   G  P          
Sbjct: 125 GPAKARRGPLRATSQDPGVPNATTGRQCSFPPELPDPKGLSFGGLVGAMPASMCPATTDG 184

Query: 219 ---PPVRIQDIKTENGTCPSP-PQPLSPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPP 274
              PP+  ++I T    CP   P   S ++    G  A   + ES + + + + S  S  
Sbjct: 185 RPRPPMEPKEISTPKPACPGELPVATSSSSCPAFGFPAGFSEAESFNKAPTPVLSPESGI 244

Query: 275 GSLPSARPLSLD---GAD--------SAPPPPAPSAPP 301
           GS    R  +L+   GAD        SA P PAP  PP
Sbjct: 245 GSSYQCRLQALNFCMGADPGLEHLLASAAPSPAPPTPP 282


>gi|134142824 forkhead box D2 [Homo sapiens]
          Length = 495

 Score =  190 bits (483), Expect = 3e-48
 Identities = 154/447 (34%), Positives = 199/447 (44%), Gaps = 86/447 (19%)

Query: 27  RAAAAAAGGGYTAMPAPMSVYSHPAHAEQYPGGMARAYGPYTPQPQPKDMVKPPYSYIAL 86
           R AAAAAG      P P +  +  A     PG    + G  T  P    +VKPPYSYIAL
Sbjct: 88  RGAAAAAGS-----PGPGAAAARGAAG---PGPGPPSGGAATRSP----LVKPPYSYIAL 135

Query: 87  ITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKP 146
           ITMAI  +P K++TL+ I +FI  RFP+YR+    WQNSIRHNLSLN+CFVK+PR+   P
Sbjct: 136 ITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNP 195

Query: 147 GKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKDKEEKDRLHLKEPPPPGRQPPPAPP 206
           GKG+YWTLDP+S +MF+NGSFLRRR+RFK++                 PPP   P P P 
Sbjct: 196 GKGNYWTLDPESADMFDNGSFLRRRKRFKRQPL---------------PPPHPHPHPHPE 240

Query: 207 EQADGNAPGPQPPPVRIQD--------------IKTENGTCPSP---PQPLSPAAALGSG 249
               G A     P   +                +       P P   P P   A A  + 
Sbjct: 241 LLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHPHAFAFAAA 300

Query: 250 SAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPPPHHSQGFS 309
           +AAA  ++  P   +      ++PP   P+A   +  G+  AP P + S P P  +    
Sbjct: 301 AAAAPCQLSVPPGRA------AAPPPGPPTASVFAGAGSAPAPAPASGSGPGPGPA---- 350

Query: 310 VDNIMTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPLALGAYSPGQSSLYSSPCSQTS 369
                    G P    AE     L  A A   A ++PP A    + G  +       +T 
Sbjct: 351 ---------GLPAFLGAE-----LGCAKAFYAASLSPPAA--GTAAGLPTALLRQGLKTD 394

Query: 370 SAGSSGGGGGGAGAAG--------GAGGAGTYHCNLQAMSLYAAGERGGHLQGAPGGAGG 421
           + G +GGGG GAG           G GG G       A      G  G     A G  G 
Sbjct: 395 AGGGAGGGGAGAGQRPSFSIDHIMGHGGGGA------APPGAGEGSPGPPFAAAAGPGGQ 448

Query: 422 SAVDDPLPDYSLPPVTSSSSSSLSHGG 448
           + V   L   +L PV  +    LSH G
Sbjct: 449 AQVLAMLTAPALAPV--AGHIRLSHPG 473


>gi|22779860 forkhead box L1 [Homo sapiens]
          Length = 345

 Score =  190 bits (483), Expect = 3e-48
 Identities = 117/282 (41%), Positives = 154/282 (54%), Gaps = 35/282 (12%)

Query: 78  KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFV 137
           KPPYSYIALI MAIQ+AP++++TLNGIYQFIMDRFPFY DN+QGWQNSIRHNLSLN+CFV
Sbjct: 49  KPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFV 108

Query: 138 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKDKEEKDRLHLKEPPPP 197
           KVPR+  +PGKGSYWTLDP   +MFENG++ RR+R        K K        K P   
Sbjct: 109 KVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKR--------KPKPGPGAPEAKRPRAE 160

Query: 198 GRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPL----SPAAALGSGSAAA 253
             Q       +A   A G  P   R+Q         P+ P PL    SP A L       
Sbjct: 161 THQRSAEAQPEAGSGAGGSGPAISRLQ-------AAPAGPSPLLDGPSPPAPL------H 207

Query: 254 VPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAP-PPHHSQGFSVDN 312
            P   SP+  +   + G++      +AR  + DG  S   P + S+P     S+ FS+D+
Sbjct: 208 WPGTASPNEDAGDAAQGAAAVAVGQAAR--TGDGPGSPLRPASRSSPKSSDKSKSFSIDS 265

Query: 313 IMTSLRGSPQSAAAEL-------SSGLLASAAASSRAGIAPP 347
           I+   +G    +  EL         G L ++  ++ + + PP
Sbjct: 266 ILAGKQGQKPPSGDELLGGAKPGPGGRLGASLLAASSSLRPP 307


>gi|6912372 forkhead box D3 [Homo sapiens]
          Length = 478

 Score =  187 bits (476), Expect = 2e-47
 Identities = 162/494 (32%), Positives = 215/494 (43%), Gaps = 124/494 (25%)

Query: 7   VSSPNSLGVVPYLGGEQSYYRAAAAAAGGGYTAMPAPMSVYSHPAHAEQYPGGMARAYGP 66
           V +P + G    +GGE+        A+GGG                    PG  + + G 
Sbjct: 96  VGAPEADGCKGGVGGEEG------GASGGG--------------------PGAGSGSAGG 129

Query: 67  YTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSI 126
             P      +VKPPYSYIALITMAI  +P KK+TL+GI +FI +RFP+YR+    WQNSI
Sbjct: 130 LAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSI 189

Query: 127 RHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKDKEEK 186
           RHNLSLN+CFVK+PR+   PGKG+YWTLDP S +MF+NGSFLRRR+RFK+          
Sbjct: 190 RHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKR---------H 240

Query: 187 DRLHLKEPPPPGRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAAL 246
            + HL+E      Q   A    A   A GP                    P  L PAAA 
Sbjct: 241 QQEHLREQTALMMQSFGAYSLAAAAGAAGPY-----------------GRPYGLHPAAAA 283

Query: 247 GSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPPPHHSQ 306
           G+ S  A        +++++ ++    P +LP   P+         PP  P  P     +
Sbjct: 284 GAYSHPAA-------AAAAAAAAALQYPYALPPVAPVL--------PPAVPLLPSGELGR 328

Query: 307 GFSVDNIMTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPLALGAYSPGQSSLYSSPCS 366
                    +  GS      +L    L +AAA+  AG A     GA     S + S P +
Sbjct: 329 -------KAAAFGSQLGPGLQLQLNSLGAAAAA--AGTA-----GAAGTTASLIKSEPSA 374

Query: 367 QTSSAGSSGGGGGGAGAAGGAGGAGTYHCNLQAMSLYAAGERGGHLQGAPGGAGGSAVDD 426
           + S +  +  GGG A   G A GA                       G  GG GGS    
Sbjct: 375 RPSFSIENIIGGGPAAPGGSAVGA-----------------------GVAGGTGGSGGGS 411

Query: 427 PLPDYSLPPVTSSSSSSLSHGGGGGGGGGGQEAGHHPAAHQGRLTSWY-----LNQAGGD 481
               +  PP T  S++ +              A H P +   R T+       +  +G  
Sbjct: 412 TAQSFLRPPGTVQSAALM--------------ATHQPLS-LSRTTATIAPILSVPLSGQF 456

Query: 482 LGHLASAAAAAAAA 495
           L   ASAAAAAAAA
Sbjct: 457 LQPAASAAAAAAAA 470



 Score = 30.4 bits (67), Expect = 4.4
 Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 17/57 (29%)

Query: 370 SAGSSGGGGGGAGAA---GGAGGAGTYHCNLQAMSLYAAGERGGHLQGAPGGAGGSA 423
           +AG+  G GG  GA    G  GG G              GE GG   G PG   GSA
Sbjct: 85  AAGAGAGPGGDVGAPEADGCKGGVG--------------GEEGGASGGGPGAGSGSA 127



 Score = 29.3 bits (64), Expect = 9.8
 Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 14/51 (27%)

Query: 450 GGGGGGGQEAGHHPAAHQGRLTSWYLNQAGGDLGHLASAAAAAAAAG--YP 498
           G  G  G+  G HPAA            A G   H A+AAAAAAAA   YP
Sbjct: 266 GAAGPYGRPYGLHPAA------------AAGAYSHPAAAAAAAAAAALQYP 304


>gi|4758392 forkhead box D1 [Homo sapiens]
          Length = 465

 Score =  186 bits (472), Expect = 5e-47
 Identities = 137/381 (35%), Positives = 178/381 (46%), Gaps = 66/381 (17%)

Query: 31  AAAGGGYTAMPAPMSVYSHPAHAEQYPGGMARAYGPYTPQPQPKDMVKPPYSYIALITMA 90
           A   GG  A P P       A A    GG     G          +VKPPYSYIALITMA
Sbjct: 80  APPAGGSPAPPGPAPAAG--AGAGGGGGGGGAGGGGSAGSGAKNPLVKPPYSYIALITMA 137

Query: 91  IQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGS 150
           I  +P K++TL+ I +FI  RFP+YR+    WQNSIRHNLSLN+CFVK+PR+   PGKG+
Sbjct: 138 ILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGN 197

Query: 151 YWTLDPDSYNMFENGSFLRRRRRFKKKDAVK---------------------DKEEKDRL 189
           YWTLDP+S +MF+NGSFLRRR+RFK++  +                      D      L
Sbjct: 198 YWTLDPESADMFDNGSFLRRRKRFKRQPLLPPNAAAAESLLLRGAGAAGGAGDPAAAAAL 257

Query: 190 HLKEPPPP-------------GRQPPPAPPEQA--------------DGNAPGPQPPP-- 220
               PPPP             G Q PP  P  A                ++P P PPP  
Sbjct: 258 FPPAPPPPPHAYGYGPYGCGYGLQLPPYAPPSALFAAAAAAAAAAAFHPHSPPPPPPPHG 317

Query: 221 VRIQDIKTENGTCPSP-----PQPLSPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPG 275
              +  +T  G  P P     P PL PA+A  +G   A     SP  S  S+  GS  P 
Sbjct: 318 AAAELARTAFGYRPHPLGAALPGPL-PASAAKAGGPGASALARSP-FSIESIIGGSLGPA 375

Query: 276 SLPSARPLSLDGADSAPPPPAPSAPPPHHSQGFSVDNIMTSLRGSPQSAAAELSSGLLAS 335
           +  +A   +   A ++P P   +APP   S G            +    AA L+  L+A+
Sbjct: 376 AAAAAAAQAAAAAQASPSPSPVAAPPAPGSSGGG------CAAQAAVGPAAALTRSLVAA 429

Query: 336 AAASSRAGIAPPLALGAYSPG 356
           AAA++ + ++   ALG    G
Sbjct: 430 AAAAA-SSVSSSAALGTLHQG 449



 Score = 37.0 bits (84), Expect = 0.047
 Identities = 15/30 (50%), Positives = 19/30 (63%)

Query: 363 SPCSQTSSAGSSGGGGGGAGAAGGAGGAGT 392
           +P     +AG+  GGGGG G AGG G AG+
Sbjct: 88  APPGPAPAAGAGAGGGGGGGGAGGGGSAGS 117



 Score = 34.7 bits (78), Expect = 0.23
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 8/48 (16%)

Query: 344 IAPPLALGAYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAGGAG 391
           +APP       PG +          + AG+ GGGGGG    GG+ G+G
Sbjct: 79  LAPPAGGSPAPPGPAP--------AAGAGAGGGGGGGGAGGGGSAGSG 118



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 169 RRRRRFKKKDAVKD--KEEKDRLHLKEPPPPGRQPPPAPPEQADGNAPG 215
           RRRR +  +D ++D  +EE D   L  PP  G   PP P   A   A G
Sbjct: 54  RRRRSYAGEDELEDLEEEEDDDDILLAPPAGGSPAPPGPAPAAGAGAGG 102



 Score = 31.2 bits (69), Expect = 2.6
 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 9/46 (19%)

Query: 415 APGGAGGSAVDDPLPDYSLPPVTSSSSSSLSHGGGGGGGGGGQEAG 460
           AP   G  A   P P         ++ +    GGGGGG GGG  AG
Sbjct: 80  APPAGGSPAPPGPAP---------AAGAGAGGGGGGGGAGGGGSAG 116


>gi|11386197 forkhead box E3 [Homo sapiens]
          Length = 319

 Score =  179 bits (455), Expect = 5e-45
 Identities = 120/300 (40%), Positives = 154/300 (51%), Gaps = 43/300 (14%)

Query: 32  AAGGGYTAMPA---------PMSVYSHPAHAEQYPGGMARAYGPYTPQP-----QPKDMV 77
           AA  G+ A+PA         P++        E+   G   A     P P     +P    
Sbjct: 11  AAFSGFPALPAVAPSGPPPSPLAGAEPGREPEEAAAGRGEAAPTPAPGPGRRRRRPLQRG 70

Query: 78  KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFV 137
           KPPYSYIALI MA+ +AP +++TL  IY+FI +RF FYRD+ + WQNSIRHNL+LN+CFV
Sbjct: 71  KPPYSYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQNSIRHNLTLNDCFV 130

Query: 138 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKDKEEKDRLHLKEPPPP 197
           KVPR+   PGKG+YWTLDP + +MF+NGSFLRRR+RFK+ +           H    P P
Sbjct: 131 KVPREPGNPGKGNYWTLDPAAADMFDNGSFLRRRKRFKRAEL--------PAHAAAAPGP 182

Query: 198 GRQPPPAPPEQADGNA---------PGPQPPP--------VRIQDIKTENGTCPSPP--- 237
               P AP   A G A         PGP PP         V +Q      G  P PP   
Sbjct: 183 PLPFPYAPYAPAPGPALLVPPPSAGPGPSPPARLFSVDSLVNLQPELAGLG-APEPPCCA 241

Query: 238 QPLSPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAP 297
            P + AAA    +AAA P + S       L +    PG LP+   L+L G  +A  P +P
Sbjct: 242 APDAAAAAFPPCAAAASPPLYSQVPDRLVLPATRPGPGPLPAEPLLALAGPAAALGPLSP 301


>gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]
          Length = 457

 Score =  178 bits (452), Expect = 1e-44
 Identities = 122/323 (37%), Positives = 159/323 (49%), Gaps = 43/323 (13%)

Query: 6   SVSSPNSLGVVPYLGGEQSYYRAAAAAAGGG---YTAMPAPMSVYSHPAHAEQYPGGMAR 62
           S  +    G+ P+L    S     AA A GG   Y  M +   +Y           G++R
Sbjct: 93  SAGAAGVAGMGPHLSPSLSPLGGQAAGAMGGLAPYANMNSMSPMYGQ--------AGLSR 144

Query: 63  AYGPYTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGW 122
           A  P T + +     KPPYSYI+LITMAIQ +P+K +TL+ IYQ+IMD FPFYR N+Q W
Sbjct: 145 ARDPKTYR-RSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRW 203

Query: 123 QNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKD 182
           QNSIRH+LS N+CF+KVPR   KPGKGS+WTL PDS NMFENG +LRR++RFK +  +  
Sbjct: 204 QNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQLAL 263

Query: 183 KEEKDRLHLKEPPPPGRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSP 242
           KE        +    G Q   A   +A G A             +T  GT  SP    SP
Sbjct: 264 KEAAGAAGSGKKAAAGAQASQAQLGEAAGPAS------------ETPAGT-ESPHSSASP 310

Query: 243 AAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPPP 302
                 G    +           + ++  SPP   PS        A    PP  P  PP 
Sbjct: 311 CQEHKRGGLGEL---------KGTPAAALSPPEPAPSPGQQQQAAAHLLGPPHHPGLPPE 361

Query: 303 HH---------SQGFSVDNIMTS 316
            H         +  FS++N+M+S
Sbjct: 362 AHLKPEHHYAFNHPFSINNLMSS 384



 Score = 35.8 bits (81), Expect = 0.11
 Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 5/102 (4%)

Query: 309 SVDNIMTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPLALGAYSPGQSSLYSSPCSQT 368
           SV N+   L  +  +    +S+  + S + +  AG     ++   S   + +  S    +
Sbjct: 27  SVSNMNAGLGMNGMNTYMSMSAAAMGSGSGNMSAG-----SMNMSSYVGAGMSPSLAGMS 81

Query: 369 SSAGSSGGGGGGAGAAGGAGGAGTYHCNLQAMSLYAAGERGG 410
             AG+  G GG AGAAG AG       +L  +   AAG  GG
Sbjct: 82  PGAGAMAGMGGSAGAAGVAGMGPHLSPSLSPLGGQAAGAMGG 123


>gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]
          Length = 463

 Score =  178 bits (452), Expect = 1e-44
 Identities = 122/323 (37%), Positives = 159/323 (49%), Gaps = 43/323 (13%)

Query: 6   SVSSPNSLGVVPYLGGEQSYYRAAAAAAGGG---YTAMPAPMSVYSHPAHAEQYPGGMAR 62
           S  +    G+ P+L    S     AA A GG   Y  M +   +Y           G++R
Sbjct: 99  SAGAAGVAGMGPHLSPSLSPLGGQAAGAMGGLAPYANMNSMSPMYGQ--------AGLSR 150

Query: 63  AYGPYTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGW 122
           A  P T + +     KPPYSYI+LITMAIQ +P+K +TL+ IYQ+IMD FPFYR N+Q W
Sbjct: 151 ARDPKTYR-RSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRW 209

Query: 123 QNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKD 182
           QNSIRH+LS N+CF+KVPR   KPGKGS+WTL PDS NMFENG +LRR++RFK +  +  
Sbjct: 210 QNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQLAL 269

Query: 183 KEEKDRLHLKEPPPPGRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSP 242
           KE        +    G Q   A   +A G A             +T  GT  SP    SP
Sbjct: 270 KEAAGAAGSGKKAAAGAQASQAQLGEAAGPAS------------ETPAGT-ESPHSSASP 316

Query: 243 AAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPPP 302
                 G    +           + ++  SPP   PS        A    PP  P  PP 
Sbjct: 317 CQEHKRGGLGEL---------KGTPAAALSPPEPAPSPGQQQQAAAHLLGPPHHPGLPPE 367

Query: 303 HH---------SQGFSVDNIMTS 316
            H         +  FS++N+M+S
Sbjct: 368 AHLKPEHHYAFNHPFSINNLMSS 390



 Score = 35.8 bits (81), Expect = 0.11
 Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 5/102 (4%)

Query: 309 SVDNIMTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPLALGAYSPGQSSLYSSPCSQT 368
           SV N+   L  +  +    +S+  + S + +  AG     ++   S   + +  S    +
Sbjct: 33  SVSNMNAGLGMNGMNTYMSMSAAAMGSGSGNMSAG-----SMNMSSYVGAGMSPSLAGMS 87

Query: 369 SSAGSSGGGGGGAGAAGGAGGAGTYHCNLQAMSLYAAGERGG 410
             AG+  G GG AGAAG AG       +L  +   AAG  GG
Sbjct: 88  PGAGAMAGMGGSAGAAGVAGMGPHLSPSLSPLGGQAAGAMGG 129


>gi|21618325 forkhead box E1 [Homo sapiens]
          Length = 373

 Score =  177 bits (450), Expect = 2e-44
 Identities = 131/360 (36%), Positives = 168/360 (46%), Gaps = 62/360 (17%)

Query: 72  QPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLS 131
           +P    KPPYSYIALI MAI +AP++++TL GIY+FI +RFPFYRDN + WQNSIRHNL+
Sbjct: 47  RPLQRGKPPYSYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLT 106

Query: 132 LNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKK----------DAVK 181
           LN+CF+K+PR+  +PGKG+YW LDP++ +MFE+GSFLRRR+RFK+           DA  
Sbjct: 107 LNDCFLKIPREAGRPGKGNYWALDPNAEDMFESGSFLRRRKRFKRSDLSTYPAYMHDAAA 166

Query: 182 DKEEKDRLHLKEPPPPGRQP---PPAPPEQADGNAPGPQPPPVRIQDIKTENGTCP---- 234
                          PG  P   PP P     G AP     P  +       G C     
Sbjct: 167 AAAAAAAAAAAAAIFPGAVPAARPPYPGAVYAGYAPPSLAAPPPVYYPAASPGPCRVFGL 226

Query: 235 SPPQPLSPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPP- 293
            P +PLSP            P    P  S +  S+G+  P +    +P    GA  A P 
Sbjct: 227 VPERPLSPELG---------PAPSGPGGSCAFASAGA--PATTTGYQPAGCTGARPANPS 275

Query: 294 --PPAPSAPPPHHSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPLAL- 350
               A + P   + QG           GS   AAA   +G  +  A  S  G+   +   
Sbjct: 276 AYAAAYAGPDGAYPQG----------AGSAIFAAAGRLAGPASPPAGGSSGGVETTVDFY 325

Query: 351 GAYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAGGAGTYHCNLQAMSLYAAGERGG 410
           G  SPGQ              G+ G      G  GGA  AG YH        +AA   GG
Sbjct: 326 GRTSPGQ-------------FGALGACYNPGGQLGGA-SAGAYHAR------HAAAYPGG 365


>gi|24497501 forkhead box A1 [Homo sapiens]
          Length = 472

 Score =  177 bits (448), Expect = 3e-44
 Identities = 135/385 (35%), Positives = 190/385 (49%), Gaps = 45/385 (11%)

Query: 9   SPNSLGVVPYLGGEQSYYRAAAAAAGGGYTAMPAPMSVY-SHPAHAEQYPGGMARAYGPY 67
           SP+ +G    +G +Q+                 +PM+   S+   +    GG A+ +   
Sbjct: 109 SPSGMGA---MGAQQAASMNGLGPYAAAMNPCMSPMAYAPSNLGRSRAGGGGDAKTFKRS 165

Query: 68  TPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIR 127
            P        KPPYSYI+LITMAIQ AP K +TL+ IYQ+IMD FP+YR N+Q WQNSIR
Sbjct: 166 YPH------AKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIR 219

Query: 128 HNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKDKEEKD 187
           H+LS N+CFVKV R   KPGKGSYWTL PDS NMFENG +LRR++RFK +          
Sbjct: 220 HSLSFNDCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKQPGAGGGGG 279

Query: 188 RLHLKEPPPPGRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSP---PQPLSPAA 244
                     G +    P   ++ +A  P    V  +  + E    P P   PQ L  + 
Sbjct: 280 SGSGGSGAKGGPESRKDPSGASNPSADSPLHRGVHGKTGQLEGAPAPGPAASPQTLDHSG 339

Query: 245 ALGSGSAAAVPKIESPDSSSS-SLSSGSSPPGSLPSARPLSLDGADSAPPPPAP--SAPP 301
           A  +G A+   ++++P SS++  +SSG     S+P++ P     A    P  +       
Sbjct: 340 ATATGGAS---ELKTPASSTAPPISSGPGALASVPASHP-----AHGLAPHESQLHLKGD 391

Query: 302 PHHS--QGFSVDNIMTS---------------LRGSPQSAAAELSSGLLASAAASSRAGI 344
           PH+S    FS++N+M+S               L+ SP  +    S   L SA+ ++R+ I
Sbjct: 392 PHYSFNHPFSINNLMSSSEQQHKLDFKAYEQALQYSPYGSTLPASLP-LGSASVTTRSPI 450

Query: 345 APPLALGAYSPGQSSLYSSPCSQTS 369
            P     AY  G   +YS P   TS
Sbjct: 451 EPSALEPAYYQG---VYSRPVLNTS 472



 Score = 37.0 bits (84), Expect = 0.047
 Identities = 35/116 (30%), Positives = 46/116 (39%), Gaps = 19/116 (16%)

Query: 372 GSSGGGGGGAGAAGGAGGAGTYH-----CNLQAMSLYAAGERG--GHLQGAPGGAGGSAV 424
           G+ GGGG G+G +G  GG  +        N  A S    G  G  G L+GAP  A G A 
Sbjct: 273 GAGGGGGSGSGGSGAKGGPESRKDPSGASNPSADSPLHRGVHGKTGQLEGAP--APGPAA 330

Query: 425 DDPLPDYS----------LPPVTSSSSSSLSHGGGGGGGGGGQEAGHHPAAHQGRL 470
                D+S          L    SS++  +S G G           H  A H+ +L
Sbjct: 331 SPQTLDHSGATATGGASELKTPASSTAPPISSGPGALASVPASHPAHGLAPHESQL 386


>gi|18959276 forkhead box D4-like 1 [Homo sapiens]
          Length = 408

 Score =  172 bits (435), Expect = 9e-43
 Identities = 118/329 (35%), Positives = 154/329 (46%), Gaps = 48/329 (14%)

Query: 78  KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFV 137
           KPPYSYIALITMAI  +P K++TL+GI  FI  RFP+YR     WQNSIRHNLSLN+CFV
Sbjct: 107 KPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFV 166

Query: 138 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKDKEEKDRLHLKEPPPP 197
           K+PR+   PGKG+YW+LDP S +MF+NGSFLRRR+RFK+                   P 
Sbjct: 167 KIPREPGHPGKGTYWSLDPASQDMFDNGSFLRRRKRFKRHQLT---------------PG 211

Query: 198 GRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPKI 257
              P P P   A      P+P P+            P+ PQP+ P A   +        +
Sbjct: 212 AHLPHPFPLPAAHAALHNPRPGPLL---------GAPALPQPV-PGAYPNTAPGRRPYAL 261

Query: 258 ESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAP-----------------SAP 300
             P      L S  +  G+     P   +GAD A P   P                 ++P
Sbjct: 262 LHPHPPRYLLLSAPAYAGA-----PKKAEGADLATPGTLPVLQPSLGPQPWEEGKGLASP 316

Query: 301 PPHHSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAAASSR-AGIAPPLALGAYSPGQSS 359
           P      FS+++IM  +RG+   AA  LS    +      R + ++   A  A + G   
Sbjct: 317 PGGGCISFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPSSLSDNFAATAAASGGGL 376

Query: 360 LYSSPCSQTSSAGSSGGGGGGAGAAGGAG 388
                  Q   AG +  G  GA A  G G
Sbjct: 377 RQRLRSHQGRGAGRAPVGRVGAAAVSGGG 405


>gi|75677594 forkhead box D4 [Homo sapiens]
          Length = 439

 Score =  170 bits (431), Expect = 3e-42
 Identities = 97/224 (43%), Positives = 123/224 (54%), Gaps = 30/224 (13%)

Query: 78  KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFV 137
           KPP SYIALITMAI  +P K++TL+GI  FI DRFP+YR     WQNSIRHNLSLN+CFV
Sbjct: 104 KPPSSYIALITMAILQSPHKRLTLSGICAFISDRFPYYRRKFPAWQNSIRHNLSLNDCFV 163

Query: 138 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKDKEEKDRLHLKEPPPP 197
           K+PR+  +PGKG+YW+LDP S +MF+NGSFLRRR+RF++                +P P 
Sbjct: 164 KIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRRKRFQR---------------HQPTPG 208

Query: 198 GRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPKI 257
              P P P   A      P+P P+            P+PPQP+ P A   +G       +
Sbjct: 209 AHLPHPFPLPAAHAALHNPRPGPLL---------GAPAPPQPV-PGAYPNTGPGRRPYAL 258

Query: 258 ESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPP 301
             P      L S  +  G+     P   +GAD A P P P   P
Sbjct: 259 LHPHPPRYLLLSAPAYAGA-----PKKAEGADLATPAPFPCCSP 297


>gi|195947376 forkhead box I2 [Homo sapiens]
          Length = 318

 Score =  170 bits (430), Expect = 4e-42
 Identities = 114/326 (34%), Positives = 163/326 (50%), Gaps = 53/326 (16%)

Query: 10  PNSLGVVPYLGGEQSYYRAAAAAAGGGYTAMPAPMSVYSHPAHAEQ-----YPGGMARA- 63
           P  LG V   GG    +  A A +   Y + P P   Y+ P++         PGG+A A 
Sbjct: 29  PGDLGAV---GGGPLLWVNAPALSPKSYASGPGPAPPYAAPSYGAPGPLLGAPGGLAGAD 85

Query: 64  --YGPYTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQG 121
             +   + Q +   +V+PPYSY ALI MAIQ+AP +K+TL+ IYQ++   FPFY+ +K G
Sbjct: 86  LAWLSLSGQQELLRLVRPPYSYSALIAMAIQSAPLRKLTLSQIYQYVAGNFPFYKRSKAG 145

Query: 122 WQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVK 181
           WQNSIRHNLSLN+CF KVPRD+  PGKG+YWTLDP+   MF+NG+F R+R+R  +  A  
Sbjct: 146 WQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRAEASAAV 205

Query: 182 DKEEKDRLHLKEPPPPGRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLS 241
               +                          AP  +PP     D++      PSP  P  
Sbjct: 206 RSGAR--------------------SVGGAEAPALEPPSAACLDLQAS----PSPSAP-- 239

Query: 242 PAAALGSGSAAAVPKIES-----PDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPA 296
            AA   SG A+A+  +       P   +   S G  PP ++ +  P +L+        P+
Sbjct: 240 EAATCFSGFASAMSALAGGLGTFPGGLAGDFSFGRRPP-TVATHAPQTLN--------PS 290

Query: 297 PSAPPPHH--SQGFSVDNIMTSLRGS 320
           P   P H   + GF + +++ S  G+
Sbjct: 291 PGFAPGHQTAAAGFRLSHLLYSREGT 316


>gi|24497506 forkhead box A3 [Homo sapiens]
          Length = 350

 Score =  167 bits (423), Expect = 2e-41
 Identities = 115/308 (37%), Positives = 143/308 (46%), Gaps = 64/308 (20%)

Query: 35  GGYTAMPAPMSVYSHPAHAEQ----YPG----GMARAYGPYTPQP-------------QP 73
           GG  A P P    + PA A      +PG    G + + G   P P             +P
Sbjct: 53  GGLPASPLPSGPLAPPAPAAPLGPTFPGLGVSGGSSSSGYGAPGPGLVHGKEMPKGYRRP 112

Query: 74  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLN 133
               KPPYSYI+LITMAIQ AP K +TL+ IYQ+IMD FP+YR+N+Q WQNSIRH+LS N
Sbjct: 113 LAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFN 172

Query: 134 ECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKDKEEKDRLHLKE 193
           +CFVKV R   KPGKGSYW L P S NMFENG +LRR++RFK ++ VK            
Sbjct: 173 DCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKLEEKVK------------ 220

Query: 194 PPPPGRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAAA 253
               G            G+A     P            T  SPPQP  PA          
Sbjct: 221 ---KGGSGAATTTRNGTGSAASTTTPA----------ATVTSPPQPPPPA---------- 257

Query: 254 VPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPPPHHSQGFSVDNI 313
            P+ E+            SP  S P    L L G      P   + P       FS++N+
Sbjct: 258 -PEPEAQGGEDVGALDCGSPASSTPYFTGLELPGELKLDAPYNFNHP-------FSINNL 309

Query: 314 MTSLRGSP 321
           M+    +P
Sbjct: 310 MSEQTPAP 317


>gi|12751477 forkhead box L2 [Homo sapiens]
          Length = 376

 Score =  167 bits (422), Expect = 3e-41
 Identities = 121/329 (36%), Positives = 153/329 (46%), Gaps = 64/329 (19%)

Query: 65  GPYTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQN 124
           G  T   +P    KPPYSY+ALI MAI+ + +K++TL+GIYQ+I+ +FPFY  NK+GWQN
Sbjct: 41  GGGTAPEKPDPAQKPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQN 100

Query: 125 SIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKDKE 184
           SIRHNLSLNECF+KVPR+     KG+YWTLDP   +MFE G++ RRRR            
Sbjct: 101 SIRHNLSLNECFIKVPREGGGERKGNYWTLDPACEDMFEKGNYRRRRR------------ 148

Query: 185 EKDRLHLKEP--PPPGRQPPPAPPEQADGNAPG-------------PQPPPVRIQDIKTE 229
                 +K P  PPP    P      A G A G               PP          
Sbjct: 149 ------MKRPFRPPPAHFQPGKGLFGAGGAAGGCGVAGAGADGYGYLAPPKYLQSGFLNN 202

Query: 230 NGTCPSPPQPL---------------SPAAALGSGS---AAAVPKIESPDSS---SSSLS 268
           +   P PP P+               + AAA G GS   AA V  +  P +S    + + 
Sbjct: 203 SWPLPQPPSPMPYASCQMAAAAAAAAAAAAAAGPGSPGAAAVVKGLAGPAASYGPYTRVQ 262

Query: 269 SGSSPPGSLPSARPLSLDGADSAPPPPAPSAPPPH-HSQGFSVDNIMTSLRGSPQSAAAE 327
           S + PPG + S     L G  +APPPP    P PH H     +          P   AA 
Sbjct: 263 SMALPPGVVNSYN--GLGGPPAAPPPP----PHPHPHPHAHHLHAAAAPPPAPPHHGAAA 316

Query: 328 LSSGLLASAAASSRAGIAPPLALGAYSPG 356
              G L+ A   S A  APP      +PG
Sbjct: 317 PPPGQLSPA---SPATAAPPAPAPTSAPG 342


>gi|21618327 forkhead box I1 isoform a [Homo sapiens]
          Length = 378

 Score =  166 bits (420), Expect = 5e-41
 Identities = 104/261 (39%), Positives = 136/261 (52%), Gaps = 36/261 (13%)

Query: 58  GGMARAYGPYTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRD 117
           GG    + P   Q +   +V+PPYSY ALI MAI  APDK++TL+ IYQ++ D FPFY  
Sbjct: 103 GGSDLGWLPIPSQEELMKLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNK 162

Query: 118 NKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKK 177
           +K GWQNSIRHNLSLN+CF KVPRD+  PGKG+YWTLDP+   MF+NG+F R+R   K+K
Sbjct: 163 SKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKR---KRK 219

Query: 178 DAVKDKEEKDRLHLKEPPPPGRQPPPAPPEQ-ADGNAPGPQPPPVRIQDIKTENGTCPSP 236
             V        L   E   P   P    P+   DG +PG               GT  SP
Sbjct: 220 SDVSSSTASLALEKTESSLPVDSPKTTEPQDILDGASPG---------------GTTSSP 264

Query: 237 PQPLSPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPA 296
            +  SP         +  P + S  SS ++  SG S     P++ PL   G       P 
Sbjct: 265 EKRPSP-------PPSGAPCLNSFLSSMTAYVSGGS-----PTSHPLVTPGLS-----PE 307

Query: 297 PSAPPPHHSQGFSVDNIMTSL 317
           PS     +S  F+  + +T+L
Sbjct: 308 PSDKTGQNSLTFNSFSPLTNL 328


>gi|208431824 forkhead box I3 [Homo sapiens]
          Length = 420

 Score =  166 bits (420), Expect = 5e-41
 Identities = 133/391 (34%), Positives = 178/391 (45%), Gaps = 73/391 (18%)

Query: 17  PYLGGEQSYYRAAAAAAGGGYTAMPAPMSV--------------------YSHPAHAEQY 56
           P +GG  S   AAAAA  G     P P +                     ++ PA A   
Sbjct: 59  PGVGGPPSAAAAAAAAYLGAPPPPPPPGAAAGPFLQPPPAAGTFGCSQRPFAQPAPAA-- 116

Query: 57  PGGMARAYGP-------YTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIM 109
           P   A   GP          +     MV+PPYSY ALI MAIQ+AP++K+TL+ IYQF+ 
Sbjct: 117 PASPAAPAGPGELGWLSMASREDLMKMVRPPYSYSALIAMAIQSAPERKLTLSHIYQFVA 176

Query: 110 DRFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLR 169
           D FPFY+ +K GWQNSIRHNLSLN+CF KVPRD+  PGKG+YWTLDP+   MF+NG+F R
Sbjct: 177 DSFPFYQRSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRR 236

Query: 170 RRRRFKKKD-----AVKDKEEKDRLHLKEPPPPGRQPPPAPPEQADGNAPGPQPPPVRIQ 224
           +R+R  +       A    + ++ L        G +P    P      +  P+PP     
Sbjct: 237 KRKRRSEASNGSTVAAGTSKSEEGLSSGLGSGVGGKPEEESPSTLLRPSHSPEPP----- 291

Query: 225 DIKTENGTCPSPPQPLSPAAALGSGSAAAVPKIESPDSSSSSL--SSGSSPPGSLPSARP 282
                 GT        S A++ G     + P + +  SS SSL  SS  S   +LP +R 
Sbjct: 292 -----EGT-------KSTASSPGGPMLTSTPCLNTFFSSLSSLSVSSSVSTQRALPGSRH 339

Query: 283 LSLDGADSAPPPPAPSAPPPHHSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAAASSRA 342
           L + GA      P+     P      S D +   L  S  ++  + SS      A++   
Sbjct: 340 LGIQGAQL----PSSGVFSPTSISEASADTL--QLSNSTSNSTGQRSSYYSPFPAST--- 390

Query: 343 GIAPPLALGAYSPGQSSLYSSPCSQTSSAGS 373
                      S GQSS +SSP    S   S
Sbjct: 391 -----------SGGQSSPFSSPFHNFSMVNS 410



 Score = 35.0 bits (79), Expect = 0.18
 Identities = 37/138 (26%), Positives = 54/138 (39%), Gaps = 19/138 (13%)

Query: 234 PSPPQPLSPAAALGSGSAAAVP----KIESPDSSSSS-----LSSGSSPPGSLPSARPLS 284
           P  P P + AAA G+  AA  P       +P +++++        G   P S  +A   +
Sbjct: 15  PGLPPPAATAAAPGAPPAARAPYGLADYAAPPAAAANPYLWLNGPGVGGPPSAAAAAAAA 74

Query: 285 LDGADSAPPPPAPSA------PPPHHSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAAA 338
             GA   PPPP  +A      PP   + G S          +P S AA    G L   + 
Sbjct: 75  YLGAPPPPPPPGAAAGPFLQPPPAAGTFGCSQRPFAQPAPAAPASPAAPAGPGELGWLSM 134

Query: 339 SSRAG----IAPPLALGA 352
           +SR      + PP +  A
Sbjct: 135 ASREDLMKMVRPPYSYSA 152


>gi|187423902 forkhead box D4-like 5 [Homo sapiens]
          Length = 416

 Score =  163 bits (412), Expect = 4e-40
 Identities = 96/224 (42%), Positives = 116/224 (51%), Gaps = 30/224 (13%)

Query: 78  KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFV 137
           KPPYSYIALITMAI   P K++TL+GI  FI  RFP+YR     WQNSIRHNLSLN+CFV
Sbjct: 108 KPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFV 167

Query: 138 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKDKEEKDRLHLKEPPPP 197
           K+PR+   PGKG+YW+LDP S +MF+NGSFLRRR+RFK+                   P 
Sbjct: 168 KIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLT---------------PG 212

Query: 198 GRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPKI 257
              P P P   A      P P P+            P+PPQP+ P A   +        +
Sbjct: 213 AHLPHPFPLPAAHAALHNPHPGPLL---------GAPAPPQPV-PGAYPNTAPGRCPYAL 262

Query: 258 ESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPP 301
             P      L S     G+     P   +GAD A P P P   P
Sbjct: 263 LHPHPLRYLLLSAPVYAGA-----PKKAEGADLATPAPFPCCSP 301


>gi|149944560 forkhead box D4-like 2 [Homo sapiens]
          Length = 416

 Score =  162 bits (411), Expect = 6e-40
 Identities = 96/224 (42%), Positives = 116/224 (51%), Gaps = 30/224 (13%)

Query: 78  KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFV 137
           KPPYSYIALITMAI   P K++TL+GI  FI  RFP+YR     WQNSIRHNLSLN+CFV
Sbjct: 108 KPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFV 167

Query: 138 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKDKEEKDRLHLKEPPPP 197
           K+PR+   PGKG+YW+LDP S +MF+NGSFLRRR+RFK+                   P 
Sbjct: 168 KIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLT---------------PG 212

Query: 198 GRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPKI 257
              P P P   A      P P P+            P+PPQP+ P A   +        +
Sbjct: 213 AHLPHPFPLPAAHAALHNPHPGPLL---------GAPAPPQPV-PGAYPNTAPGRRPYAL 262

Query: 258 ESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPP 301
             P      L S     G+     P   +GAD A P P P   P
Sbjct: 263 LHPHPLRYLLLSARVYAGA-----PKKAEGADLATPAPFPCCSP 301


>gi|76880472 forkhead box D4-like 4 [Homo sapiens]
          Length = 416

 Score =  162 bits (411), Expect = 6e-40
 Identities = 96/224 (42%), Positives = 116/224 (51%), Gaps = 30/224 (13%)

Query: 78  KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFV 137
           KPPYSYIALITMAI   P K++TL+GI  FI  RFP+YR     WQNSIRHNLSLN+CFV
Sbjct: 108 KPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFV 167

Query: 138 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKDKEEKDRLHLKEPPPP 197
           K+PR+   PGKG+YW+LDP S +MF+NGSFLRRR+RFK+                   P 
Sbjct: 168 KIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLT---------------PG 212

Query: 198 GRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPKI 257
              P P P   A      P P P+            P+PPQP+ P A   +        +
Sbjct: 213 AHLPHPFPLPAAHAALHNPHPGPLL---------GAPAPPQPV-PGAYPNTAPGRRPYAL 262

Query: 258 ESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPP 301
             P      L S     G+     P   +GAD A P P P   P
Sbjct: 263 LHPHPLRYLLLSARVYAGA-----PKKAEGADLATPAPFPCCSP 301


>gi|157042770 forkhead box D4-like 3 [Homo sapiens]
          Length = 417

 Score =  160 bits (404), Expect = 4e-39
 Identities = 95/224 (42%), Positives = 116/224 (51%), Gaps = 30/224 (13%)

Query: 78  KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFV 137
           KPPYSYIALITMAI   P K++TL+GI  FI  RFP+YR     WQNSIRHNLSLN+CFV
Sbjct: 108 KPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFV 167

Query: 138 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKDKEEKDRLHLKEPPPP 197
           K+PR+   PGKG+YW+LDP S +MF+NGSFLRRR+RFK+                   P 
Sbjct: 168 KIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLT---------------PG 212

Query: 198 GRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPKI 257
              P P P   A      P+P P+            P+PPQP+ P A   +        +
Sbjct: 213 AHLPHPFPLPAAHAALHNPRPGPLL---------GAPAPPQPV-PGAYPNTAPGRRPYAL 262

Query: 258 ESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPP 301
             P      L S     G+     P   +GA  A P P P   P
Sbjct: 263 LHPHPLRYLLLSAPVYAGA-----PKKAEGAALATPAPFPCCSP 301


>gi|146262007 forkhead box D4-like 6 [Homo sapiens]
          Length = 417

 Score =  159 bits (403), Expect = 5e-39
 Identities = 95/224 (42%), Positives = 115/224 (51%), Gaps = 30/224 (13%)

Query: 78  KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFV 137
           KPPYSYIALITMAI   P K++TL+GI  FI  RFP+YR     WQNSIRHNLSLN+CFV
Sbjct: 108 KPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFV 167

Query: 138 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKDKEEKDRLHLKEPPPP 197
           K+PR+   PGKG+YW+LDP S +MF+NGSFLRRR+RFK+                   P 
Sbjct: 168 KIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLT---------------PG 212

Query: 198 GRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPKI 257
              P P P   A      P P P+            P+PPQP+ P A   +        +
Sbjct: 213 AHLPHPFPLPAAHAALHNPHPGPLL---------GAPAPPQPV-PGAYPNTAPGRRPYAL 262

Query: 258 ESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPP 301
             P      L S     G+     P   +GA  A P P P   P
Sbjct: 263 LHPHPLRYLLLSAPVYAGA-----PKKAEGAALATPAPFPCCSP 301


>gi|105554437 forkhead box B1 [Homo sapiens]
          Length = 325

 Score =  159 bits (402), Expect = 6e-39
 Identities = 101/256 (39%), Positives = 136/256 (53%), Gaps = 32/256 (12%)

Query: 78  KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFV 137
           KPPYSYI+L  MAIQ++P+K + L+ IY+FIMDRFP+YR+N Q WQNS+RHNLS N+CF+
Sbjct: 13  KPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFI 72

Query: 138 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRF-----------KKKDAVKDKEEK 186
           K+PR   +PGKGS+W L P   +MFENGSFLRRR+RF           K  DA +  +++
Sbjct: 73  KIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFKVLKSDHLAPSKPADAAQYLQQQ 132

Query: 187 DRLHLKEPPPPGRQPP--PAPPEQADGNA-PGPQPPPVRIQDI-----KTENGTCPSPPQ 238
            +L L      G   P  PA      G A P     P  I++I     K   G   S  Q
Sbjct: 133 AKLRLSALAASGTHLPQMPAAAYNLGGVAQPSGFKHPFAIENIIAREYKMPGGLAFSAMQ 192

Query: 239 PLSPA-----------AALGSGSAAAVPKIESPDSSSS-SLSSGSSPPGSLPSARPLSLD 286
           P+  A           ++LG+G           DS++  S++SG      +P  +PL   
Sbjct: 193 PVPAAYPLPNQLTTMGSSLGTGWPHVYGSAGMIDSATPISMASGDYSAYGVP-LKPLCHA 251

Query: 287 GADSAPPPPAPSAPPP 302
              + P  P P  P P
Sbjct: 252 AGQTLPAIPVPIKPTP 267


>gi|61966923 forkhead box B2 [Homo sapiens]
          Length = 432

 Score =  158 bits (399), Expect = 1e-38
 Identities = 111/345 (32%), Positives = 150/345 (43%), Gaps = 60/345 (17%)

Query: 78  KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFV 137
           KPPYSYI+L  MAIQ++ +K + L+ IY+FIM+RFP+YR++ Q WQNS+RHNLS N+CF+
Sbjct: 13  KPPYSYISLTAMAIQHSAEKMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNLSFNDCFI 72

Query: 138 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDA------------------ 179
           K+PR   +PGKGS+W L PD  +MFENGSFLRRR+RFK   A                  
Sbjct: 73  KIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKRFKVLRADHTHLHAGSTKSAPGAGP 132

Query: 180 ---------------VKDKEEKDRLHLKEPPPPGRQPPPAPPEQA----DGNAPGPQPPP 220
                                    H   PP P   PPP PP             PQPPP
Sbjct: 133 GGHLHPHHHHHPHHHHHHHAAAHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPPP 192

Query: 221 VRIQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSA 280
                   +      P QP  P     + + AA        +++++ ++     G L   
Sbjct: 193 HLPSQPPQQPPQQSQPQQPSHPGKMQEAAAVAA--------AAAAAAAAAVGSVGRLSQF 244

Query: 281 RPLSLDGADSAPPPPAPSAPPPHHSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAAASS 340
            P  L  A +A    A S     H   F+++NI+       +     L +G L  A+   
Sbjct: 245 PPYGLGSAAAAAAAAAASTSGFKHP--FAIENII------GRDYKGVLQAGGLPLASVMH 296

Query: 341 RAGIAPPLALGAYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAG 385
             G   P  LG       ++ SS         S       A AAG
Sbjct: 297 HLGYPVPGQLG-------NVVSSVWPHVGVMDSVAAAAAAAAAAG 334


>gi|4557595 forkhead box F2 [Homo sapiens]
          Length = 444

 Score =  153 bits (386), Expect = 5e-37
 Identities = 113/299 (37%), Positives = 143/299 (47%), Gaps = 49/299 (16%)

Query: 78  KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFV 137
           KPPYSYIALI MAIQ++P K++TL+ IYQF+  RFPF+R   QGW+NS+RHNLSLNECF+
Sbjct: 100 KPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFI 159

Query: 138 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKK-DAVKDKEEKDRLHL---KE 193
           K+P+   +PGKG YWT+DP S  MFE GSF RR R F++K  A+K    +    L     
Sbjct: 160 KLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMYHRVVSGLGFGAS 219

Query: 194 PPPPG---RQPPPAP---------------PEQADGNAPGP-----------QPPPVRIQ 224
             P G   + PP AP               P   D  A  P             P +   
Sbjct: 220 LLPQGFDFQAPPSAPLGCHSQGGYGGLDMMPAGYDAGAGAPSHAHPHHHHHHHVPHMSPN 279

Query: 225 DIKTENGTCPSPPQPLSPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLS 284
              T   +CP P  P    AA G G          PDSSSS + S  +   ++    P +
Sbjct: 280 PGSTYMASCPVPAGPGGVGAAGGGGGGD-----YGPDSSSSPVPSSPAMASAIECHSPYT 334

Query: 285 LDGADSAPPPPAP--SAPP-------PHHSQGFSVDNIMTSLRGS--PQSAAAELSSGL 332
              A  + P  +P    PP       P  S G        SL  S   Q+A  +LS GL
Sbjct: 335 SPAAHWSSPGASPYLKQPPALTPSSNPAASAGLHSSMSSYSLEQSYLHQNAREDLSVGL 393



 Score = 36.2 bits (82), Expect = 0.081
 Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 17/101 (16%)

Query: 293 PPPAP----SAPPPHHSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPL 348
           PPPAP     +P P   Q         +L   P +AAA  ++    ++++SS +      
Sbjct: 7   PPPAPLRRACSPVPGALQA--------ALMSPPPAAAAAAAAAPETTSSSSSSSS----- 53

Query: 349 ALGAYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAGG 389
           A  A S   S+  S+P +   SAG  G G G  GA   + G
Sbjct: 54  ASCASSSSSSNSASAPSAACKSAGGGGAGAGSGGAKKASSG 94



 Score = 35.4 bits (80), Expect = 0.14
 Identities = 35/91 (38%), Positives = 39/91 (42%), Gaps = 23/91 (25%)

Query: 201 PPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPKIESP 260
           PPPAP  +A    PG     +             SPP    PAAA    +AAA P+  S 
Sbjct: 7   PPPAPLRRACSPVPGALQAALM------------SPP----PAAA---AAAAAAPETTSS 47

Query: 261 DSSSSSL----SSGSSPPGSLPSARPLSLDG 287
            SSSSS     SS SS   S PSA   S  G
Sbjct: 48  SSSSSSASCASSSSSSNSASAPSAACKSAGG 78



 Score = 33.9 bits (76), Expect = 0.40
 Identities = 32/90 (35%), Positives = 40/90 (44%), Gaps = 15/90 (16%)

Query: 314 MTSLRGSPQSAAAELSS---GLLASA------AASSRAGIAPPLALGAYSPGQSSLYSSP 364
           MT+  G P +      S   G L +A      AA++ A  AP     + S   +S  SS 
Sbjct: 1   MTTEGGPPPAPLRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSS 60

Query: 365 CSQTS----SAGSSGGGGGGAGAAGGAGGA 390
            S  S    SA     GGGGAGA  G+GGA
Sbjct: 61  SSSNSASAPSAACKSAGGGGAGA--GSGGA 88



 Score = 30.0 bits (66), Expect = 5.8
 Identities = 34/107 (31%), Positives = 39/107 (36%), Gaps = 15/107 (14%)

Query: 348 LALGAYSPGQSSLYSSPCSQTSSAGSSGGGGG----------GAGAAGGAGGAGTYHCNL 397
           L  GA    Q   + +P S      S GG GG          GAGA   A     +H ++
Sbjct: 214 LGFGASLLPQGFDFQAPPSAPLGCHSQGGYGGLDMMPAGYDAGAGAPSHAHPHHHHHHHV 273

Query: 398 QAMS-----LYAAGERGGHLQGAPGGAGGSAVDDPLPDYSLPPVTSS 439
             MS      Y A        G  G AGG    D  PD S  PV SS
Sbjct: 274 PHMSPNPGSTYMASCPVPAGPGGVGAAGGGGGGDYGPDSSSSPVPSS 320


>gi|110735445 forkhead box F1 [Homo sapiens]
          Length = 379

 Score =  150 bits (379), Expect = 3e-36
 Identities = 108/288 (37%), Positives = 145/288 (50%), Gaps = 29/288 (10%)

Query: 22  EQSYYRAAAAAAGGGYTAMPAPMSVYSHPAHAEQYPGGMARAYGPYTPQPQPKDMVKPPY 81
           +Q  +       GGG  AM  P S  S P+ A++   G+ R        P+     KPPY
Sbjct: 8   QQPPHGGGGGGGGGGGAAMD-PAS--SGPSKAKKTNAGIRR--------PE-----KPPY 51

Query: 82  SYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFVKVPR 141
           SYIALI MAIQ++P K++TL+ IYQF+  RFPF+R + QGW+NS+RHNLSLNECF+K+P+
Sbjct: 52  SYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPK 111

Query: 142 DDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKK-DAVKDK-EEKDRLHLKEPPPP-- 197
              +PGKG YWT+DP S  MFE GSF RR R F++K  A+K      + L     P    
Sbjct: 112 GLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMYSMMNGLGFNHLPDTYG 171

Query: 198 ------GRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSA 251
                 G   PP       G        P  +  +   + + P  P     +   G G A
Sbjct: 172 FQGSAGGLSCPPNSLALEGGLGMMNGHLPGNVDGMALPSHSVPHLPSNGGHSYMGGCGGA 231

Query: 252 AAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSA 299
           AA    E P   SS  +S   P G+     P ++    +A  PP+ SA
Sbjct: 232 AAG---EYPHHDSSVPASPLLPTGAGGVMEPHAVYSGSAAAWPPSASA 276



 Score = 37.0 bits (84), Expect = 0.047
 Identities = 40/148 (27%), Positives = 59/148 (39%), Gaps = 17/148 (11%)

Query: 385 GGAGGAGTYHCNLQAMSLYAA-GERGGHLQGAPGGAGGSAVDDPLPDYSLPPVTSSSSSS 443
           G  G AG   C   +++L    G   GHL   PG   G A    LP +S+P + S+   S
Sbjct: 171 GFQGSAGGLSCPPNSLALEGGLGMMNGHL---PGNVDGMA----LPSHSVPHLPSNGGHS 223

Query: 444 LSHGGGGGGGGGGQEAGHHPAAHQGRLTSWYLNQAGGDLGHLASAAAAAAAAGYPGQQQN 503
                   GG GG  AG +P        S  L    G +    +  + +AAA  P     
Sbjct: 224 YM------GGCGGAAAGEYPHHDSSVPASPLLPTGAGGVMEPHAVYSGSAAAWPPSASAA 277

Query: 504 FHSVREMFESQRIGLNN---SPVNGNSS 528
            +S     + Q +   N   +P++G+ S
Sbjct: 278 LNSGASYIKQQPLSPCNPAANPLSGSLS 305



 Score = 31.2 bits (69), Expect = 2.6
 Identities = 12/14 (85%), Positives = 12/14 (85%)

Query: 446 HGGGGGGGGGGQEA 459
           HGGGGGGGGGG  A
Sbjct: 12  HGGGGGGGGGGGAA 25



 Score = 30.0 bits (66), Expect = 5.8
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 362 SSPCSQTSSAGSSGGGGGGAGAAGGAGGAG 391
           S+P  Q    G  GGGGGG GAA     +G
Sbjct: 3   SAPEKQQPPHGGGGGGGGGGGAAMDPASSG 32


>gi|32307177 forkhead box G1 [Homo sapiens]
          Length = 489

 Score =  142 bits (357), Expect = 1e-33
 Identities = 64/96 (66%), Positives = 79/96 (82%)

Query: 78  KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFV 137
           KPP+SY ALI MAI+ +P+K++TLNGIY+FIM  FP+YR+NKQGWQNSIRHNLSLN+CFV
Sbjct: 181 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFV 240

Query: 138 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRR 173
           KVPR    PGKG+YW LDP S ++F  G+  + RRR
Sbjct: 241 KVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 276



 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 28/68 (41%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 190 HLKEPPPPGRQPPPAPPEQ--ADGNAPGPQPPPVR----IQDIKTENGTCPSPPQPLSPA 243
           H   PPPP  QPPP P +Q       P PQPP  R      D K        PP P  PA
Sbjct: 54  HHHHPPPPAPQPPPPPQQQQPPPPPPPAPQPPQTRGAPAADDDKGPQQLLLPPPPPPPPA 113

Query: 244 AALGSGSA 251
           AAL    A
Sbjct: 114 AALDGAKA 121



 Score = 32.7 bits (73), Expect = 0.89
 Identities = 38/154 (24%), Positives = 47/154 (30%), Gaps = 38/154 (24%)

Query: 292 PPPPAPSAPPPHHSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAAASSRAG----IAPP 347
           PPPPAP  PPP   Q           +  P    A        + AA    G    + PP
Sbjct: 58  PPPPAPQPPPPPQQQ-----------QPPPPPPPAPQPPQTRGAPAADDDKGPQQLLLPP 106

Query: 348 LALGAYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAG------GAGGAGTYHCNLQAMS 401
                  P  ++L  +        G  GGG G     G      GAG  G          
Sbjct: 107 ---PPPPPPAAALDGAKADGLGGKGEPGGGPGELAPVGPDEKEKGAGAGGE--------- 154

Query: 402 LYAAGERGGHLQGAPGGAGGSAVDDPLPDYSLPP 435
                E+ G  +G   G GG   +     Y  PP
Sbjct: 155 -----EKKGAGEGGKDGEGGKEGEKKNGKYEKPP 183



 Score = 30.0 bits (66), Expect = 5.8
 Identities = 33/123 (26%), Positives = 40/123 (32%), Gaps = 15/123 (12%)

Query: 273 PPGSLPSARPLSLDGADSAPPPPAPSAPPPHHSQGFSVD----NIMTSLRGSPQSAAAEL 328
           PP   P   P         PPPPAP  P    +     D     ++      P  AAA  
Sbjct: 58  PPPPAPQPPPPPQQQQPPPPPPPAPQPPQTRGAPAADDDKGPQQLLLPPPPPPPPAAA-- 115

Query: 329 SSGLLASAAASSRAGIAPPLALGAYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAG 388
               L  A A    G   P       PG+ +    P  +   AG+ G    GAG  G  G
Sbjct: 116 ----LDGAKADGLGGKGEP----GGGPGELAPV-GPDEKEKGAGAGGEEKKGAGEGGKDG 166

Query: 389 GAG 391
             G
Sbjct: 167 EGG 169


>gi|169171269 PREDICTED: similar to forkhead box L2 [Homo sapiens]
          Length = 632

 Score =  141 bits (356), Expect = 1e-33
 Identities = 106/301 (35%), Positives = 138/301 (45%), Gaps = 72/301 (23%)

Query: 53  AEQYPGGMARAYGPYTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRF 112
           A+ YP G +          + K + +P YSYIALI MAIQ +P  ++TL+GIY FIM +F
Sbjct: 16  ADDYPAGSS---------DEDKRLTRPAYSYIALIAMAIQQSPAGRVTLSGIYDFIMRKF 66

Query: 113 PFYRDNKQGWQNSIRHNLSLNECFVKVPRDD-KKPGKGSYWTLD---PDSYNMFENGSFL 168
           P+YR N++ WQNSIRHNLSLN CFVKVPR +  + GKG+YWT         ++FENG++ 
Sbjct: 67  PYYRANQRAWQNSIRHNLSLNSCFVKVPRSEGHEKGKGNYWTFAGSCESLLDLFENGNYR 126

Query: 169 RRRRRFKKKDAVKDKEEKDRLHLKEPPPPGRQPPPAP-----------PEQADGNAPGPQ 217
           RRRRR   K          R   + P   G Q P  P           P+ A   APG +
Sbjct: 127 RRRRRRGPK----------REGPRGPRAGGAQGPSGPSELPAAQGRLAPDSAGEGAPGRE 176

Query: 218 PP-------PVRIQDIKTENGTCPSPPQP---LSPAAALGSGSAAAVPKIESPDSSSSSL 267
           PP           +D+K       S P P   L P      G    + K+ SP     +L
Sbjct: 177 PPASPAPPGKEHPRDLKFSIDYILSSPDPFPGLKPPCLAQEGRYPRLEKV-SPQCQRQTL 235

Query: 268 SSGSSP------------------PGSLPSARPLS-----LDGADSAPPPPAPSAPPPHH 304
           S    P                   G    +RPL      +DG    PP  A  AP P+H
Sbjct: 236 SKRGLPTPVSILINSQIQGHQQGVTGQAVVSRPLDAGWPWMDG----PPLQAVFAPAPNH 291

Query: 305 S 305
           +
Sbjct: 292 T 292


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.130    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,439,552
Number of Sequences: 37866
Number of extensions: 2105518
Number of successful extensions: 50425
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 2225
Number of HSP's that attempted gapping in prelim test: 16153
Number of HSP's gapped (non-prelim): 18155
length of query: 553
length of database: 18,247,518
effective HSP length: 107
effective length of query: 446
effective length of database: 14,195,856
effective search space: 6331351776
effective search space used: 6331351776
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.