Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 239755624

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239755624 PREDICTED: hypothetical protein XP_002344645 [Homo
sapiens]
         (427 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239755624 PREDICTED: hypothetical protein XP_002344645 [Homo ...   866   0.0  
gi|239750127 PREDICTED: hypothetical protein XP_002347282 [Homo ...   848   0.0  
gi|239744435 PREDICTED: hypothetical protein XP_002343144 [Homo ...   530   e-150
gi|239752579 PREDICTED: hypothetical protein XP_002348295 [Homo ...    37   0.034
gi|239747203 PREDICTED: hypothetical protein LOC643965 [Homo sap...    36   0.076
gi|239741003 PREDICTED: hypothetical protein LOC643965 [Homo sap...    36   0.076
gi|157504499 ankyrin repeat domain 47 [Homo sapiens]                   35   0.100
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]            34   0.22 
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]            34   0.22 
gi|126032348 hect domain and RLD 2 [Homo sapiens]                      34   0.29 
gi|126722969 centromere protein T [Homo sapiens]                       34   0.29 
gi|239752199 PREDICTED: hypothetical protein XP_002348146 [Homo ...    34   0.29 
gi|239746724 PREDICTED: hypothetical protein XP_002343820 [Homo ...    34   0.29 
gi|119220598 apolipoprotein B48 receptor [Homo sapiens]                34   0.29 
gi|27894378 chloride intracellular channel 6 [Homo sapiens]            34   0.29 
gi|239757832 PREDICTED: hypothetical protein [Homo sapiens]            33   0.38 
gi|239752343 PREDICTED: hypothetical protein [Homo sapiens]            33   0.38 
gi|239746856 PREDICTED: hypothetical protein XP_002343859 [Homo ...    33   0.38 
gi|239757626 PREDICTED: hypothetical protein XP_002345507 [Homo ...    33   0.49 
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]           33   0.65 
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]           33   0.65 
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]           33   0.65 
gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]    32   0.84 
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]            32   1.1  
gi|4758876 poly(A) binding protein, nuclear 1 [Homo sapiens]           32   1.1  
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s...    32   1.4  
gi|239749498 PREDICTED: hypothetical protein [Homo sapiens]            32   1.4  
gi|239743634 PREDICTED: hypothetical protein XP_002342919 [Homo ...    32   1.4  
gi|219842343 glutamate receptor, metabotropic 5 isoform a precur...    31   1.9  
gi|4504143 glutamate receptor, metabotropic 5 isoform b precurso...    31   1.9  

>gi|239755624 PREDICTED: hypothetical protein XP_002344645 [Homo
           sapiens]
          Length = 427

 Score =  866 bits (2238), Expect = 0.0
 Identities = 427/427 (100%), Positives = 427/427 (100%)

Query: 1   MRGAGCGACPLAAAGRMSRTSGAGSAGPVPWGAMRQVAPENRSASDKWLWLLKAHGKGCR 60
           MRGAGCGACPLAAAGRMSRTSGAGSAGPVPWGAMRQVAPENRSASDKWLWLLKAHGKGCR
Sbjct: 1   MRGAGCGACPLAAAGRMSRTSGAGSAGPVPWGAMRQVAPENRSASDKWLWLLKAHGKGCR 60

Query: 61  KVTEVPPPPASFNLSELPCAAGVQVHRAGQDVRYPERESCLLSMDMVGGPGLKPPNWPQE 120
           KVTEVPPPPASFNLSELPCAAGVQVHRAGQDVRYPERESCLLSMDMVGGPGLKPPNWPQE
Sbjct: 61  KVTEVPPPPASFNLSELPCAAGVQVHRAGQDVRYPERESCLLSMDMVGGPGLKPPNWPQE 120

Query: 121 TRCPRSQLSAGLCSAFHMSSISQLHAEGSDALVAAGRQAGALQTHAHVGVVDGEERGVAG 180
           TRCPRSQLSAGLCSAFHMSSISQLHAEGSDALVAAGRQAGALQTHAHVGVVDGEERGVAG
Sbjct: 121 TRCPRSQLSAGLCSAFHMSSISQLHAEGSDALVAAGRQAGALQTHAHVGVVDGEERGVAG 180

Query: 181 GRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALHELAGEQVAAGWL 240
           GRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALHELAGEQVAAGWL
Sbjct: 181 GRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALHELAGEQVAAGWL 240

Query: 241 RLQEADYVGGVHEHVVVAAEQKARVRAACSQPVEQVQVLEREVEEGVREGPLQHVAKEAA 300
           RLQEADYVGGVHEHVVVAAEQKARVRAACSQPVEQVQVLEREVEEGVREGPLQHVAKEAA
Sbjct: 241 RLQEADYVGGVHEHVVVAAEQKARVRAACSQPVEQVQVLEREVEEGVREGPLQHVAKEAA 300

Query: 301 HWPPAVAALLPPRAPDELASLVVLRRRLHRQEQEHASAAGALGRCVPKQREVAAVAVPQE 360
           HWPPAVAALLPPRAPDELASLVVLRRRLHRQEQEHASAAGALGRCVPKQREVAAVAVPQE
Sbjct: 301 HWPPAVAALLPPRAPDELASLVVLRRRLHRQEQEHASAAGALGRCVPKQREVAAVAVPQE 360

Query: 361 VLDARGQLLEVGRGVRRGVRHARGPGDELRGRLVSRGSVGGTLWRLLLRGPLLPRGPWRL 420
           VLDARGQLLEVGRGVRRGVRHARGPGDELRGRLVSRGSVGGTLWRLLLRGPLLPRGPWRL
Sbjct: 361 VLDARGQLLEVGRGVRRGVRHARGPGDELRGRLVSRGSVGGTLWRLLLRGPLLPRGPWRL 420

Query: 421 EEPLLQC 427
           EEPLLQC
Sbjct: 421 EEPLLQC 427


>gi|239750127 PREDICTED: hypothetical protein XP_002347282 [Homo
           sapiens]
          Length = 457

 Score =  848 bits (2192), Expect = 0.0
 Identities = 426/457 (93%), Positives = 426/457 (93%), Gaps = 30/457 (6%)

Query: 1   MRGAGCGACPLAAAGRMSRTSGAGSAGPVPWGAMRQVAP--------------------- 39
           MRGAGCGACPLAAAGRMSRTSGAGSAGPVPWGAMRQVAP                     
Sbjct: 1   MRGAGCGACPLAAAGRMSRTSGAGSAGPVPWGAMRQVAPDTVHITGTDGTHPLIHSPQKH 60

Query: 40  ---------ENRSASDKWLWLLKAHGKGCRKVTEVPPPPASFNLSELPCAAGVQVHRAGQ 90
                    ENRSASDKWLWLLKAHGKGCRKVTEVPPPPASFNLSELPCAAGVQVHRAGQ
Sbjct: 61  VGVFVMACSENRSASDKWLWLLKAHGKGCRKVTEVPPPPASFNLSELPCAAGVQVHRAGQ 120

Query: 91  DVRYPERESCLLSMDMVGGPGLKPPNWPQETRCPRSQLSAGLCSAFHMSSISQLHAEGSD 150
           DVRYPERESCLLSMDMVGGPGLKPPNWPQETRCPRSQLSAGLCSAFHMSSISQLHAEG D
Sbjct: 121 DVRYPERESCLLSMDMVGGPGLKPPNWPQETRCPRSQLSAGLCSAFHMSSISQLHAEGPD 180

Query: 151 ALVAAGRQAGALQTHAHVGVVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEEL 210
           ALVAAGRQAGALQTHAHVGVVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEEL
Sbjct: 181 ALVAAGRQAGALQTHAHVGVVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEEL 240

Query: 211 RRHEVLAPAVADGHGALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACS 270
           RRHEVLAPAVADGHGALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACS
Sbjct: 241 RRHEVLAPAVADGHGALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACS 300

Query: 271 QPVEQVQVLEREVEEGVREGPLQHVAKEAAHWPPAVAALLPPRAPDELASLVVLRRRLHR 330
           QPVEQVQVLEREVEEGVREGPLQHVAKEAAHWPPAVAALLPPRAPDELASLVVLRRRLHR
Sbjct: 301 QPVEQVQVLEREVEEGVREGPLQHVAKEAAHWPPAVAALLPPRAPDELASLVVLRRRLHR 360

Query: 331 QEQEHASAAGALGRCVPKQREVAAVAVPQEVLDARGQLLEVGRGVRRGVRHARGPGDELR 390
           QEQEHASAAGALGRCVPKQREVAAVAVPQEVLDARGQLLEVGRGVRRGVRHARGPGDELR
Sbjct: 361 QEQEHASAAGALGRCVPKQREVAAVAVPQEVLDARGQLLEVGRGVRRGVRHARGPGDELR 420

Query: 391 GRLVSRGSVGGTLWRLLLRGPLLPRGPWRLEEPLLQC 427
           GRLVSRGSVGGTLWRLLLRGPLLPRGPWRLEEPLLQC
Sbjct: 421 GRLVSRGSVGGTLWRLLLRGPLLPRGPWRLEEPLLQC 457


>gi|239744435 PREDICTED: hypothetical protein XP_002343144 [Homo
           sapiens]
          Length = 278

 Score =  530 bits (1365), Expect = e-150
 Identities = 265/272 (97%), Positives = 267/272 (98%)

Query: 156 GRQAGALQTHAHVGVVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEV 215
           G +    +THAHVGVVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEV
Sbjct: 7   GARPARSKTHAHVGVVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEV 66

Query: 216 LAPAVADGHGALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACSQPVEQ 275
           LAPAVADGHGALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACSQPVEQ
Sbjct: 67  LAPAVADGHGALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACSQPVEQ 126

Query: 276 VQVLEREVEEGVREGPLQHVAKEAAHWPPAVAALLPPRAPDELASLVVLRRRLHRQEQEH 335
           VQVLEREVEEGVREGPLQHVAKEAAHWPPAVAALLPPRAPDELASLVVLRRRLHRQEQEH
Sbjct: 127 VQVLEREVEEGVREGPLQHVAKEAAHWPPAVAALLPPRAPDELASLVVLRRRLHRQEQEH 186

Query: 336 ASAAGALGRCVPKQREVAAVAVPQEVLDARGQLLEVGRGVRRGVRHARGPGDELRGRLVS 395
           ASAAGALGRCVPKQREVAAVAVPQEVLDARGQLLEVGRGVRRGVRHARGPGDELRGRLVS
Sbjct: 187 ASAAGALGRCVPKQREVAAVAVPQEVLDARGQLLEVGRGVRRGVRHARGPGDELRGRLVS 246

Query: 396 RGSVGGTLWRLLLRGPLLPRGPWRLEEPLLQC 427
           RGSVGGTLWRLLLRGPLLPRGPWRLEEPLLQC
Sbjct: 247 RGSVGGTLWRLLLRGPLLPRGPWRLEEPLLQC 278


>gi|239752579 PREDICTED: hypothetical protein XP_002348295 [Homo
           sapiens]
          Length = 240

 Score = 37.0 bits (84), Expect = 0.034
 Identities = 43/153 (28%), Positives = 59/153 (38%), Gaps = 13/153 (8%)

Query: 63  TEVPPPPASFNLSELPCAAGVQVHRAGQDVRYPERESCLLSMDMVGGPGLKPPNWPQETR 122
           + V P  A   LS    A    +H A    R   R  CL         G +PPN    TR
Sbjct: 70  SRVTPATALLPLSHRGRAQRRSMHAAAAQERSLGR-GCL---------GKEPPNRESWTR 119

Query: 123 C-PRSQLS--AGLCSAFHMSSISQLHAEGSDALVAAGRQAGALQTHAHVGVVDGEERGVA 179
             PR  +S  A    +    S  Q    G   L   G +A A++T +      G ++   
Sbjct: 120 SDPRHCISQDASRSGSRVCRSRPQTRGSGGKKLRQRGEKAAAVKTCSGRSKKPGRQKAAV 179

Query: 180 GGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRR 212
            G     GRG   ++AAAA     +G G++L R
Sbjct: 180 MGAKSRGGRGKKPQKAAAAGAKSCNGGGKKLGR 212


>gi|239747203 PREDICTED: hypothetical protein LOC643965 [Homo
           sapiens]
          Length = 451

 Score = 35.8 bits (81), Expect = 0.076
 Identities = 56/213 (26%), Positives = 78/213 (36%), Gaps = 35/213 (16%)

Query: 185 GPGRGAGQEEAAAAAVHRVSGPGEELRRHEVL-APAVADGHGALHELAGEQVAAGWLRLQ 243
           GPGR  G E  AA  +H V+ P   ++  E    P +  G     +L G+QV++G   +Q
Sbjct: 14  GPGRSCGSEGTAAGNLH-VAFPRGVMQGCEAQGVPRIHLGPLGDQQLDGKQVSSGGSPVQ 72

Query: 244 EADYVGGVHEHVVVAAEQKARVRAACSQPVEQVQVLEREVEEGVREGPLQHVAKEAAHWP 303
                          A         C    + + VLE E + G    P Q         P
Sbjct: 73  R-------------RAAMPVPDAWVCPVAQQHLNVLEEERKAGAGLSPTQRCG------P 113

Query: 304 PAVAALLP-PRAPDELASLVVLRRRLHRQEQEHASAAG----------ALGRCVPKQREV 352
            A+  + P P   +E       R   H Q    A AAG          A GR  P +R  
Sbjct: 114 RAIPGVHPRPARQEEAQRRPAPRSGSHEQGAVQARAAGRQQLQHRQPPARGR--PVRRRP 171

Query: 353 AAVAVPQEVLDARGQLLEVGRGVRRGVRHARGP 385
           AA  +      +R + L+  RG +R V    GP
Sbjct: 172 AARVLRLRCRGSRARSLQQARGQQR-VAQGSGP 203


>gi|239741003 PREDICTED: hypothetical protein LOC643965 [Homo
           sapiens]
          Length = 487

 Score = 35.8 bits (81), Expect = 0.076
 Identities = 56/213 (26%), Positives = 78/213 (36%), Gaps = 35/213 (16%)

Query: 185 GPGRGAGQEEAAAAAVHRVSGPGEELRRHEVL-APAVADGHGALHELAGEQVAAGWLRLQ 243
           GPGR  G E  AA  +H V+ P   ++  E    P +  G     +L G+QV++G   +Q
Sbjct: 14  GPGRSCGSEGTAAGNLH-VAFPRGVMQGCEAQGVPRIHLGPLGDQQLDGKQVSSGGSPVQ 72

Query: 244 EADYVGGVHEHVVVAAEQKARVRAACSQPVEQVQVLEREVEEGVREGPLQHVAKEAAHWP 303
                          A         C    + + VLE E + G    P Q         P
Sbjct: 73  R-------------RAAMPVPDAWVCPVAQQHLNVLEEERKAGAGLSPTQRCG------P 113

Query: 304 PAVAALLP-PRAPDELASLVVLRRRLHRQEQEHASAAG----------ALGRCVPKQREV 352
            A+  + P P   +E       R   H Q    A AAG          A GR  P +R  
Sbjct: 114 RAIPGVHPRPARQEEAQRRPAPRSGSHEQGAVQARAAGRQQLQHRQPPARGR--PVRRRP 171

Query: 353 AAVAVPQEVLDARGQLLEVGRGVRRGVRHARGP 385
           AA  +      +R + L+  RG +R V    GP
Sbjct: 172 AARVLRLRCRGSRARSLQQARGQQR-VAQGSGP 203


>gi|157504499 ankyrin repeat domain 47 [Homo sapiens]
          Length = 821

 Score = 35.4 bits (80), Expect = 0.100
 Identities = 71/248 (28%), Positives = 96/248 (38%), Gaps = 56/248 (22%)

Query: 182 RAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALHELAGEQVAAGWLR 241
           RA  PGRG  +    +      S P   L      APA + G   L +L  EQ+AA   R
Sbjct: 149 RAPSPGRGVPRSPRGSGR----SSPAPNL------APA-SPGPAQL-QLVREQMAAALRR 196

Query: 242 LQE----ADYVGGVHEHVVVAAEQKARVRAACSQPVEQVQVLEREVEEGVREGPLQHVAK 297
           L+E    A  +  + E V     +KAR+ A  +QP    +   R      +   L+ + +
Sbjct: 197 LRELEDQARTLPELQEQVRALRAEKARLLAGRAQPEPDGEAETRPD----KLAQLRRLTE 252

Query: 298 EAAHWPPAVAALLPPRA--PDELAS------LVVLRRR---LHRQEQEHASAAGALGRCV 346
             A       A   PRA  PD LA+      L VL      L    Q    AA A    V
Sbjct: 253 RLATSERGGRARASPRADSPDGLAAGRSEGALQVLDGEVGSLDGTPQTREVAAEA----V 308

Query: 347 PKQREVAAVAVPQ----------EVLDARGQLLEVGRGV-----------RRGVRHARGP 385
           P+ RE  A AVP+          E ++A   + E   G+           R  + H RG 
Sbjct: 309 PETREAGAQAVPETREAGVEAAPETVEADAWVTEALLGLPAAAERELELLRASLEHQRGV 368

Query: 386 GDELRGRL 393
            + LRGRL
Sbjct: 369 SELLRGRL 376


>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 34.3 bits (77), Expect = 0.22
 Identities = 75/249 (30%), Positives = 89/249 (35%), Gaps = 50/249 (20%)

Query: 153  VAAGRQAGALQTHAHVGVVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRR 212
            VA+    GA    A   +V G E GVAGG A+G G  AG    A A V R+        R
Sbjct: 799  VASVAAEGAQVAWAGAVLVQGHEAGVAGG-ARGGGAAAG-GPLAGAVVQRMRQRRVRAGR 856

Query: 213  HEVLAPAVADGHGALHELAGEQVA---AGWLRLQEADYVGGVHEHVVVAAEQKARVRAAC 269
              V A AVA         AG Q A    G  R++        H H     +     RA C
Sbjct: 857  RRVGARAVA--------AAGRQGAGAGGGGRRVRHG------HGHGAAVLQ-----RAPC 897

Query: 270  SQPVEQVQVLEREVEEGVREGPLQHVAKEAAHWPPAVAALLPPRAPDELASLVVLRRRLH 329
             Q             +GVR       A+  AH P A  A      P         R R  
Sbjct: 898  RQQRHLAPAAAAAAAQGVR------AAQGRAHRPGAQGAPSHRHRPG-------ARGRRS 944

Query: 330  RQEQEHASAAG------ALGRCVPKQREVAAVAVPQEVLDARGQLLEVGRGVRRGVRHAR 383
            R+    A A G      ALGR     + V A A  Q  L A GQ+ +V    R       
Sbjct: 945  RRRAAVALAGGAHPARAALGRRRGGGQAVGARAAHQARL-AGGQVDQVVVAAR------A 997

Query: 384  GPGDELRGR 392
            G  D +RGR
Sbjct: 998  GDADGVRGR 1006



 Score = 33.9 bits (76), Expect = 0.29
 Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 3/84 (3%)

Query: 177 GVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALHELAG--EQ 234
           G AG   QG  RG  +  A A    R +      RRH  +      G      LAG    
Sbjct: 416 GQAGQPLQGQARGPHRPAALAQEALRAAAARPHGRRHYRVRGLRGAGPEGAGRLAGPWRG 475

Query: 235 VAAGWLRLQEADYVGGVHEHVVVA 258
           +    L LQ+A + GG HEHV+VA
Sbjct: 476 LRLQTLLLQDAPH-GGAHEHVLVA 498



 Score = 29.3 bits (64), Expect = 7.1
 Identities = 81/300 (27%), Positives = 107/300 (35%), Gaps = 50/300 (16%)

Query: 128 LSAGLCSAFHMSSISQLHAE-----GSDALVAAGR---QAGALQTHAHVGVVD--GEERG 177
           L  GL S   +     LHA           +  GR   + G   T +H+GVV      RG
Sbjct: 304 LQEGLDSRHLLHEAQPLHARRRAGHAGSFWLRGGRDRLRRGGGHTKSHLGVVTIVPGRRG 363

Query: 178 VAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALHELAGE--QV 235
            A G  +  GRG  +++       R +GPG      +VLA A+      +   AG+  Q 
Sbjct: 364 RAAGGQERGGRGRRRQQGRRG--RRQAGPGLAKVDVDVLAGALGLRWQWVLVHAGQAGQP 421

Query: 236 AAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACSQPVEQVQVLEREVEEGVREGPLQHV 295
             G  R        G H    +A E    +RAA ++P  +     R    G+R    +  
Sbjct: 422 LQGQAR--------GPHRPAALAQE---ALRAAAARPHGRRHYRVR----GLRGAGPEGA 466

Query: 296 AKEAAHWPP-AVAALLPPRAPDELASLVVLRRRLHRQEQEHASAAGALGRCVPKQREVAA 354
            + A  W    +  LL   AP   A         H        A G  G     Q  VAA
Sbjct: 467 GRLAGPWRGLRLQTLLLQDAPHGGA---------HEHVLVAVPATGVGGLVGAGQGAVAA 517

Query: 355 VAVPQEVLDA--RGQLLEVGRGVRRGVRHARGPGDELRGRLVSRGSVGGTLWRLLLRGPL 412
                E L A  +G   EVGRG R         GD + G  V    VG  L   +L G L
Sbjct: 518 AGNAPERLPAGVQGCGEEVGRGAR---------GDRVAGGHVEVVPVGQQLAICMLHGQL 568


>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 34.3 bits (77), Expect = 0.22
 Identities = 75/249 (30%), Positives = 89/249 (35%), Gaps = 50/249 (20%)

Query: 153  VAAGRQAGALQTHAHVGVVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRR 212
            VA+    GA    A   +V G E GVAGG A+G G  AG    A A V R+        R
Sbjct: 799  VASVAAEGAQVAWAGAVLVQGHEAGVAGG-ARGGGAAAG-GPLAGAVVQRMRQRRVRAGR 856

Query: 213  HEVLAPAVADGHGALHELAGEQVA---AGWLRLQEADYVGGVHEHVVVAAEQKARVRAAC 269
              V A AVA         AG Q A    G  R++        H H     +     RA C
Sbjct: 857  RRVGARAVA--------AAGRQGAGAGGGGRRVRHG------HGHGAAVLQ-----RAPC 897

Query: 270  SQPVEQVQVLEREVEEGVREGPLQHVAKEAAHWPPAVAALLPPRAPDELASLVVLRRRLH 329
             Q             +GVR       A+  AH P A  A      P         R R  
Sbjct: 898  RQQRHLAPAAAAAAAQGVR------AAQGRAHRPGAQGAPSHRHRPG-------ARGRRS 944

Query: 330  RQEQEHASAAG------ALGRCVPKQREVAAVAVPQEVLDARGQLLEVGRGVRRGVRHAR 383
            R+    A A G      ALGR     + V A A  Q  L A GQ+ +V    R       
Sbjct: 945  RRRAAVALAGGAHPARAALGRRRGGGQAVGARAAHQARL-AGGQVDQVVVAAR------A 997

Query: 384  GPGDELRGR 392
            G  D +RGR
Sbjct: 998  GDADGVRGR 1006



 Score = 33.9 bits (76), Expect = 0.29
 Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 3/84 (3%)

Query: 177 GVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALHELAG--EQ 234
           G AG   QG  RG  +  A A    R +      RRH  +      G      LAG    
Sbjct: 416 GQAGQPLQGQARGPHRPAALAQEALRAAAARPHGRRHYRVRGLRGAGPEGAGRLAGPWRG 475

Query: 235 VAAGWLRLQEADYVGGVHEHVVVA 258
           +    L LQ+A + GG HEHV+VA
Sbjct: 476 LRLQTLLLQDAPH-GGAHEHVLVA 498



 Score = 29.3 bits (64), Expect = 7.1
 Identities = 81/300 (27%), Positives = 107/300 (35%), Gaps = 50/300 (16%)

Query: 128 LSAGLCSAFHMSSISQLHAE-----GSDALVAAGR---QAGALQTHAHVGVVD--GEERG 177
           L  GL S   +     LHA           +  GR   + G   T +H+GVV      RG
Sbjct: 304 LQEGLDSRHLLHEAQPLHARRRAGHAGSFWLRGGRDRLRRGGGHTKSHLGVVTIVPGRRG 363

Query: 178 VAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALHELAGE--QV 235
            A G  +  GRG  +++       R +GPG      +VLA A+      +   AG+  Q 
Sbjct: 364 RAAGGQERGGRGRRRQQGRRG--RRQAGPGLAKVDVDVLAGALGLRWQWVLVHAGQAGQP 421

Query: 236 AAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACSQPVEQVQVLEREVEEGVREGPLQHV 295
             G  R        G H    +A E    +RAA ++P  +     R    G+R    +  
Sbjct: 422 LQGQAR--------GPHRPAALAQE---ALRAAAARPHGRRHYRVR----GLRGAGPEGA 466

Query: 296 AKEAAHWPP-AVAALLPPRAPDELASLVVLRRRLHRQEQEHASAAGALGRCVPKQREVAA 354
            + A  W    +  LL   AP   A         H        A G  G     Q  VAA
Sbjct: 467 GRLAGPWRGLRLQTLLLQDAPHGGA---------HEHVLVAVPATGVGGLVGAGQGAVAA 517

Query: 355 VAVPQEVLDA--RGQLLEVGRGVRRGVRHARGPGDELRGRLVSRGSVGGTLWRLLLRGPL 412
                E L A  +G   EVGRG R         GD + G  V    VG  L   +L G L
Sbjct: 518 AGNAPERLPAGVQGCGEEVGRGAR---------GDRVAGGHVEVVPVGQQLAICMLHGQL 568


>gi|126032348 hect domain and RLD 2 [Homo sapiens]
          Length = 4834

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 4/66 (6%)

Query: 358  PQEVLDARGQLLEV--GRGVRRGVRHARGPGDELRGRLVSRGSVGGTLWRLLLRGPLLP- 414
            P  V+D   +++ V  GR         R PGDEL+ + +S GSV G  WR  +  P++P 
Sbjct: 3654 PLTVMDGVNRIVSVRSGREWSDWSSELRIPGDELKWKFISDGSVNGWGWRFTVY-PIMPA 3712

Query: 415  RGPWRL 420
             GP  L
Sbjct: 3713 AGPKEL 3718


>gi|126722969 centromere protein T [Homo sapiens]
          Length = 561

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 12/93 (12%)

Query: 140 SISQLHAEGSDALVAAGRQAGALQTHAHVGVVDGEERGVAGGRAQGPGRGAGQEEAA--A 197
           S+S++ A G+          G    H  V   +G + G A   A GPG  +G E+A+  A
Sbjct: 343 SVSEMEATGAQGPSRVEEAEG----HTEVTEAEGSQ-GTA--EADGPGASSGDEDASGRA 395

Query: 198 AAVHRVSGPGEEL---RRHEVLAPAVADGHGAL 227
           A+    S   E L   R H+ L PA A G   L
Sbjct: 396 ASPESASSTPESLQARRHHQFLEPAPAPGAAVL 428


>gi|239752199 PREDICTED: hypothetical protein XP_002348146 [Homo
           sapiens]
          Length = 220

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 38/128 (29%), Positives = 50/128 (39%), Gaps = 19/128 (14%)

Query: 232 GEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACSQPVEQVQVLEREVEEGVRE-- 289
           G   AAGW R + AD   G    V  +A  + +   A ++     +V ER VE GV E  
Sbjct: 66  GVSGAAGWARGRGADATQGAAGTVAASAAARPQAAEARAEVARGERVDER-VEAGVGEAQ 124

Query: 290 ----GPLQH------VAKEAAHWPPAVAALLP------PRAPDELASLVVLRRRLHRQEQ 333
               G   H         E  H   A A +LP       RA    A +  + RR  R++Q
Sbjct: 125 RAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVGRREERRQQ 184

Query: 334 EHASAAGA 341
            H    GA
Sbjct: 185 PHQPHCGA 192


>gi|239746724 PREDICTED: hypothetical protein XP_002343820 [Homo
           sapiens]
          Length = 220

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 38/128 (29%), Positives = 50/128 (39%), Gaps = 19/128 (14%)

Query: 232 GEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARVRAACSQPVEQVQVLEREVEEGVRE-- 289
           G   AAGW R + AD   G    V  +A  + +   A ++     +V ER VE GV E  
Sbjct: 66  GVSGAAGWARGRGADATQGAAGTVAASAAARPQAAEARAEVARGERVDER-VEAGVGEAQ 124

Query: 290 ----GPLQH------VAKEAAHWPPAVAALLP------PRAPDELASLVVLRRRLHRQEQ 333
               G   H         E  H   A A +LP       RA    A +  + RR  R++Q
Sbjct: 125 RAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVAHGAVVAEVGRREERRQQ 184

Query: 334 EHASAAGA 341
            H    GA
Sbjct: 185 PHQPHCGA 192


>gi|119220598 apolipoprotein B48 receptor [Homo sapiens]
          Length = 1088

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 50/200 (25%), Positives = 74/200 (37%), Gaps = 34/200 (17%)

Query: 42  RSASDKWLWLLKAHGK---------GCRKVTEVPPPPASFNLSELPCAAGVQVHRAGQDV 92
           R A  +W W  +  GK         G  +  E     A    +E P A G      G++V
Sbjct: 194 RGAESEWTWHGETEGKAGAVGPKAAGDNREMEQGVREADAGETEEPGAEGAG---KGEEV 250

Query: 93  RYPERESCLLSMDMVGGPGLKPPNWP----QETRC-PRSQLSAGLCSAFHMSSIS----- 142
              E+           GPG +P +W     +E R  P  + +  +       +IS     
Sbjct: 251 VVVEKACESTRAWGTWGPGAEPEDWGILGREEARTTPGREEARAILDGEEARTISGGEEA 310

Query: 143 QLHAEGSDALVAAG-RQAGALQTHAHVGVVDGEERGVA-GGRAQGPGRG-------AGQE 193
           +  + G +A  A+G  +AG        G+  G E G A GG   G   G       +G+E
Sbjct: 311 ETASGGEEAETASGGEEAGTASGGEEAGIASGGEAGTASGGEEAGTASGGDEAWTTSGKE 370

Query: 194 EAAAAAVHRV---SGPGEEL 210
           EA    V +    + PGE L
Sbjct: 371 EADLLGVRQTEYGAVPGERL 390


>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
          Length = 686

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 175 ERGVAGGRAQGPGRGAGQEEA--AAAAVHRVSGPGEELRRHEVLAPAVADGHG 225
           E G AGG A+GP    G EEA   AAAV    G G + R  E  A      HG
Sbjct: 30  EPGAAGGEAEGPEGSEGAEEAPRGAAAVKEAGGGGPD-RGPEAEARGTRGAHG 81


>gi|239757832 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 503

 Score = 33.5 bits (75), Expect = 0.38
 Identities = 39/124 (31%), Positives = 52/124 (41%), Gaps = 31/124 (25%)

Query: 21  SGAGSAGPVPWGAM-RQVAPENRSASDK-WLWLLKAHGKGCRKVTEVPPPPASFNLSELP 78
           SGA   GP+P G + R+VA E +S      L L  A     ++++ VPP PASF     P
Sbjct: 305 SGAAVRGPLPRGTLGRKVAQEKKSLEGAPELALRGAFPAWGQRLSAVPPDPASF-----P 359

Query: 79  CAAGVQVHRAGQDVRYPERESCLLSMDMVGGPGLKP--------------PNWPQETRCP 124
             +GV +   G+ VR  E +           PG KP               N P     P
Sbjct: 360 PVSGVGL--LGKSVRPKEPKH--------SSPGKKPAGRKTRESQAAAREDNDPNRDEVP 409

Query: 125 RSQL 128
           R+QL
Sbjct: 410 RAQL 413


>gi|239752343 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 518

 Score = 33.5 bits (75), Expect = 0.38
 Identities = 39/124 (31%), Positives = 52/124 (41%), Gaps = 31/124 (25%)

Query: 21  SGAGSAGPVPWGAM-RQVAPENRSASDK-WLWLLKAHGKGCRKVTEVPPPPASFNLSELP 78
           SGA   GP+P G + R+VA E +S      L L  A     ++++ VPP PASF     P
Sbjct: 305 SGAAVRGPLPRGTLGRKVAQEKKSLEGAPELALRGAFPAWGQRLSAVPPDPASF-----P 359

Query: 79  CAAGVQVHRAGQDVRYPERESCLLSMDMVGGPGLKP--------------PNWPQETRCP 124
             +GV +   G+ VR  E +           PG KP               N P     P
Sbjct: 360 PVSGVGL--LGKSVRPKEPKH--------SSPGKKPAGRKTRESQAAAREDNDPNRDEVP 409

Query: 125 RSQL 128
           R+QL
Sbjct: 410 RAQL 413


>gi|239746856 PREDICTED: hypothetical protein XP_002343859 [Homo
           sapiens]
          Length = 518

 Score = 33.5 bits (75), Expect = 0.38
 Identities = 39/124 (31%), Positives = 52/124 (41%), Gaps = 31/124 (25%)

Query: 21  SGAGSAGPVPWGAM-RQVAPENRSASDK-WLWLLKAHGKGCRKVTEVPPPPASFNLSELP 78
           SGA   GP+P G + R+VA E +S      L L  A     ++++ VPP PASF     P
Sbjct: 305 SGAAVRGPLPRGTLGRKVAQEKKSLEGAPELALRGAFPAWGQRLSAVPPDPASF-----P 359

Query: 79  CAAGVQVHRAGQDVRYPERESCLLSMDMVGGPGLKP--------------PNWPQETRCP 124
             +GV +   G+ VR  E +           PG KP               N P     P
Sbjct: 360 PVSGVGL--LGKSVRPKEPKH--------SSPGKKPAGRKTRESQAAAREDNDPNRDEVP 409

Query: 125 RSQL 128
           R+QL
Sbjct: 410 RAQL 413


>gi|239757626 PREDICTED: hypothetical protein XP_002345507 [Homo
           sapiens]
          Length = 609

 Score = 33.1 bits (74), Expect = 0.49
 Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 2/100 (2%)

Query: 61  KVTEVPPPPASFNLSELPCAAGVQVHRAGQDVRYPERESCLLSMDMVGGPGLKPPNWPQE 120
           +V+  P P A       P   G    R G+ VR PE     ++     G     P    E
Sbjct: 483 RVSTTPQPTAQPGSGAGPQRPGPTQKRGGRGVRVPEGSPARIAFSGRRGGAKAQPMAEAE 542

Query: 121 TRCPRSQLSAGLCSAFHMSSISQLHAEGSDALVAAGRQAG 160
           +   R +   G   A    +++QL A G  AL AA R +G
Sbjct: 543 SLGDRERRDGG--GAAGGGAVAQLRAVGQGALCAAPRDSG 580


>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
          Length = 460

 Score = 32.7 bits (73), Expect = 0.65
 Identities = 36/132 (27%), Positives = 46/132 (34%), Gaps = 11/132 (8%)

Query: 110 PGLKPPNWPQETRCPRSQLSAGLCSAFHMSSISQLHAEGSDALVAAGRQAGALQTHAHVG 169
           P  + P   +E+ C    L  G C     S        G        R+          G
Sbjct: 276 PRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRG-------G 328

Query: 170 VVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALHE 229
             +GE      G A  PGR    +E   AAV R +G GE  RR   L P     HGAL  
Sbjct: 329 GGEGEGTHATHGPASPPGRR--HDEEVGAAVLR-AGSGEGSRRGLQLTPPPRRVHGALQR 385

Query: 230 L-AGEQVAAGWL 240
              G  + + W+
Sbjct: 386 FGGGRNLKSNWM 397


>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
          Length = 460

 Score = 32.7 bits (73), Expect = 0.65
 Identities = 36/132 (27%), Positives = 46/132 (34%), Gaps = 11/132 (8%)

Query: 110 PGLKPPNWPQETRCPRSQLSAGLCSAFHMSSISQLHAEGSDALVAAGRQAGALQTHAHVG 169
           P  + P   +E+ C    L  G C     S        G        R+          G
Sbjct: 276 PRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRG-------G 328

Query: 170 VVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALHE 229
             +GE      G A  PGR    +E   AAV R +G GE  RR   L P     HGAL  
Sbjct: 329 GGEGEGTHATHGPASPPGRR--HDEEVGAAVLR-AGSGEGSRRGLQLTPPPRRVHGALQR 385

Query: 230 L-AGEQVAAGWL 240
              G  + + W+
Sbjct: 386 FGGGRNLKSNWM 397


>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
          Length = 460

 Score = 32.7 bits (73), Expect = 0.65
 Identities = 36/132 (27%), Positives = 46/132 (34%), Gaps = 11/132 (8%)

Query: 110 PGLKPPNWPQETRCPRSQLSAGLCSAFHMSSISQLHAEGSDALVAAGRQAGALQTHAHVG 169
           P  + P   +E+ C    L  G C     S        G        R+          G
Sbjct: 276 PRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRG-------G 328

Query: 170 VVDGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALHE 229
             +GE      G A  PGR    +E   AAV R +G GE  RR   L P     HGAL  
Sbjct: 329 GGEGEGTHATHGPASPPGRR--HDEEVGAAVLR-AGSGEGSRRGLQLTPPPRRVHGALQR 385

Query: 230 L-AGEQVAAGWL 240
              G  + + W+
Sbjct: 386 FGGGRNLKSNWM 397


>gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]
          Length = 2608

 Score = 32.3 bits (72), Expect = 0.84
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 11/61 (18%)

Query: 175 ERGVAGGRAQGP--------GRGAGQEEAAAAAVHRVSGPGEE---LRRHEVLAPAVADG 223
           +RG AG   +GP        G+  G+E+A  AA  +     EE     RH+++ P  ADG
Sbjct: 201 DRGEAGSLQKGPKDFDRFLVGKELGREKAGKAAEGKERPAAEEDGGKERHKLVLPVPADG 260

Query: 224 H 224
           H
Sbjct: 261 H 261


>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 480

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 172 DGEERGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALHEL- 230
           +GE      G A  PGR    +E   AAV R +G GE  RR   L P     HGAL    
Sbjct: 351 EGEGTHATHGPASPPGRR--HDEEVGAAVLR-AGSGEGSRRGLQLTPPPRRVHGALQRFG 407

Query: 231 AGEQVAAGWL 240
            G  + + W+
Sbjct: 408 GGRNLKSNWM 417


>gi|4758876 poly(A) binding protein, nuclear 1 [Homo sapiens]
          Length = 306

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 45/146 (30%), Positives = 54/146 (36%), Gaps = 37/146 (25%)

Query: 177 GVAGGRAQGPGR------GAGQEEAAAAAVHRVSGPG--------EELRRHEVL------ 216
           G AGGR  GPGR      GAG E    A      G G        EEL   E+L      
Sbjct: 12  GAAGGRGSGPGRRRHLVPGAGGEAGEGAP----GGAGDYGNGLESEELEPEELLLEPEPE 67

Query: 217 -----------APAVADGHGALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQKARV 265
                      AP  A G G      G Q       L E D   G  E   + A  KARV
Sbjct: 68  PEPEEEPPRPRAPPGAPGPGPGSGAPGSQEEEEEPGLVEGDPGDGAIEDPELEA-IKARV 126

Query: 266 RAACSQPVEQVQVLEREVEEGVREGP 291
           R    +  E+++ L+ EVE+ +   P
Sbjct: 127 R-EMEEEAEKLKELQNEVEKQMNMSP 151


>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
           sapiens]
          Length = 940

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 44/173 (25%), Positives = 55/173 (31%), Gaps = 21/173 (12%)

Query: 56  GKGCRKVTEVPPPPASFNLSELPCAAGVQVHRAGQDVRYPERESCLLSMDMVGGPGLKPP 115
           G+G R   E PPPP  F  +           R G+    P          MVGG G +P 
Sbjct: 706 GRGGRGGNEPPPPPPPFRGA-----------RGGRSGGGPPNGRGGPGGGMVGGGGHRPH 754

Query: 116 NWPQETRCPRSQLSAGLCSAFHMSSISQLHAEGSDALVAAGRQAGALQTHAHVGVVDGEE 175
             P       S           M S  + H EG    +  G   G  + H      +G  
Sbjct: 755 EGPGGGMGNSSGHRPHEGPGGGMGSGHRPH-EGPGGSMGGG---GGHRPH------EGPG 804

Query: 176 RGVAGGRAQGPGRGAGQEEAAAAAVHRVSGPGEELRRHEVLAPAVADGHGALH 228
            G++GG    P  G G    A        GPG  +       P    GHG  H
Sbjct: 805 GGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGPH 857


>gi|239749498 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 692

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 11/95 (11%)

Query: 207 GEELRRHEVLAPAVADGHG-----ALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQ 261
           GEE   H VL   V+  H      AL ++A E V A   +  E D      +H V  AE 
Sbjct: 291 GEEAHSHHVLHRHVSVAHATALLNALQQVAHEGVHA-LAQALEHDQCQRDAQHGVEHAEG 349

Query: 262 KARVRAACSQPVEQVQV----LEREVEEGVREGPL 292
            AR+ A CS P+  +       +R+V EG  E PL
Sbjct: 350 LARIGARCSVPITSLTYGGDDRDRKV-EGAGEFPL 383


>gi|239743634 PREDICTED: hypothetical protein XP_002342919 [Homo
           sapiens]
          Length = 692

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 11/95 (11%)

Query: 207 GEELRRHEVLAPAVADGHG-----ALHELAGEQVAAGWLRLQEADYVGGVHEHVVVAAEQ 261
           GEE   H VL   V+  H      AL ++A E V A   +  E D      +H V  AE 
Sbjct: 291 GEEAHSHHVLHRHVSVAHATALLNALQQVAHEGVHA-LAQALEHDQCQRDAQHGVEHAEG 349

Query: 262 KARVRAACSQPVEQVQV----LEREVEEGVREGPL 292
            AR+ A CS P+  +       +R+V EG  E PL
Sbjct: 350 LARIGARCSVPITSLTYGGDDRDRKV-EGAGEFPL 383


>gi|219842343 glutamate receptor, metabotropic 5 isoform a precursor
            [Homo sapiens]
          Length = 1212

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 2    RGAGCGACPLAAAGRMSRTSGAGSAGPVPWGAMRQVAPENRSASDKWLW 50
            RG G GA    +AG +  T GAG AG  P G      PE+  A  K L+
Sbjct: 959  RGLGAGAGAGGSAGGVGATGGAGCAGAGPGG------PESPDAGPKALY 1001


>gi|4504143 glutamate receptor, metabotropic 5 isoform b precursor
           [Homo sapiens]
          Length = 1180

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 2   RGAGCGACPLAAAGRMSRTSGAGSAGPVPWGAMRQVAPENRSASDKWLW 50
           RG G GA    +AG +  T GAG AG  P G      PE+  A  K L+
Sbjct: 927 RGLGAGAGAGGSAGGVGATGGAGCAGAGPGG------PESPDAGPKALY 969


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,569,082
Number of Sequences: 37866
Number of extensions: 1022328
Number of successful extensions: 4486
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 4374
Number of HSP's gapped (non-prelim): 198
length of query: 427
length of database: 18,247,518
effective HSP length: 105
effective length of query: 322
effective length of database: 14,271,588
effective search space: 4595451336
effective search space used: 4595451336
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press