CENPT 2894

Name: CENPT	Sequence: fasta or formatted (561aa)		NCBI GI: 126722969
Description: centromere protein T		Referenced in: Centromere Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.5 59 2 C cysteine 0.9 5 1 D aspartate 4.1 23 2 E glutamate 8.6 48 3 F phenylalanine 2.3 13 1 G glycine 7.3 41 1 H histidine 3.0 17 2 I isoleucine 1.1 6 1 K lysine 3.0 17 2 L leucine 10.5 59 2 M methionine 1.6 9 1 N asparagine 1.6 9 1 P proline 9.8 55 2 Q glutamine 5.7 32 2 R arginine 8.2 46 2 S serine 9.4 53 2 T threonine 5.3 30 2 V valine 5.9 33 2 W tryptophan 0.0 0 0 Y tyrosine 1.1 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 centromere protein T TNRC18 0.029 trinucleotide repeat containing 18 SRRM1 0.027 serine/arginine repetitive matrix 1 RP1L1 0.025 retinitis pigmentosa 1-like 1 FNDC1 0.025 fibronectin type III domain containing 1 RPGR 0.021 retinitis pigmentosa GTPase regulator isoform C [Hom... FLJ22184 0.017 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.017 PREDICTED: hypothetical protein LOC80164 NEFM 0.017 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.017 neurofilament, medium polypeptide 150kDa isoform 2 ... HIST1H1E 0.017 histone cluster 1, H1e SETD1A 0.017 SET domain containing 1A SRCAP 0.016 Snf2-related CBP activator protein C15orf39 0.014 hypothetical protein LOC56905 SMTNL1 0.014 smoothelin-like 1 NHSL1 0.014 NHS-like 1 FAM71E2 0.014 hypothetical protein LOC284418 MKL1 0.014 megakaryoblastic leukemia 1 protein WDR81 0.014 PREDICTED: WD repeat domain 81 WDR81 0.014 PREDICTED: WD repeat domain 81 WDR81 0.014 PREDICTED: WD repeat domain 81 TPR 0.014 nuclear pore complex-associated protein TPR KIAA1949 0.014 phostensin KIAA1949 0.014 phostensin FAM47C 0.013 hypothetical protein LOC442444 LMTK3 0.013 lemur tyrosine kinase 3 TCEAL3 0.013 transcription elongation factor A (SII)-like 3 [Homo... TCEAL3 0.013 transcription elongation factor A (SII)-like 3 [Homo... MECP2 0.013 methyl CpG binding protein 2 isoform 2 MECP2 0.013 methyl CpG binding protein 2 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.