Guide to the Human Genome
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Name: GRM5 Sequence: fasta or formatted (1212aa) NCBI GI: 219842343
Description:

glutamate receptor, metabotropic 5 isoform a precursor

Referenced in:

Glutamate

Other entries for this name:
alt prot [1180aa] glutamate receptor, metabotropic 5 isoform b precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         97           4
 C cysteine            3.1         38           2
 D aspartate           4.4         53           3
 E glutamate           5.3         64           4
 F phenylalanine       3.5         43           1
 G glycine             7.6         92           2
 H histidine           1.8         22           2
 I isoleucine          6.5         79           3
 K lysine              5.3         64           3
 L leucine             8.3        100           3
 M methionine          2.8         34           2
 N asparagine          3.3         40           1
 P proline             5.5         67           2
 Q glutamine           3.2         39           2
 R arginine            4.9         59           2
 S serine             10.1        122           4
 T threonine           5.4         66           2
 V valine              6.3         76           2
 W tryptophan          1.2         15           1
 Y tyrosine            3.5         42           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutamate receptor, metabotropic 5 isoform a precur... 
GRM5                  0.966   glutamate receptor, metabotropic 5 isoform b precurso...
GRM1                  0.566   glutamate receptor, metabotropic 1 isoform alpha pr...
GRM1                  0.520   glutamate receptor, metabotropic 1 isoform beta pre...
GRM3                  0.267   glutamate receptor, metabotropic 3 precursor 
GRM2                  0.264   glutamate receptor, metabotropic 2 isoform a precurs...
GRM4                  0.260   glutamate receptor, metabotropic 4 
GRM8                  0.260   glutamate receptor, metabotropic 8 isoform b precur...
GRM8                  0.260   glutamate receptor, metabotropic 8 isoform a precur...
GRM7                  0.256   glutamate receptor, metabotropic 7 isoform b precurs...
GRM7                  0.256   glutamate receptor, metabotropic 7 isoform a precurso...
GRM6                  0.241   glutamate receptor, metabotropic 6 precursor 
CASR                  0.150   calcium-sensing receptor 
GPRC6A                0.102   G protein-coupled receptor, family C, group 6, memb...
TAS1R1                0.097   sweet taste receptor T1r isoform b 
TAS1R2                0.083   taste receptor, type 1, member 2 
GRM2                  0.071   glutamate receptor, metabotropic 2 isoform b 
TAS1R1                0.049   sweet taste receptor T1r isoform c 
TAS1R1                0.043   sweet taste receptor T1r isoform a 
TAS1R3                0.042   taste receptor, type 1, member 3 
GABBR2                0.017   G protein-coupled receptor 51 
GABBR1                0.013   gamma-aminobutyric acid (GABA) B receptor 1 isoform...
GPR158                0.012   G protein-coupled receptor 158 
GABBR1                0.012   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
GABBR1                0.012   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
TAS1R1                0.012   sweet taste receptor T1r isoform d 
GPR179                0.011   GPR158-like 1 
BIN1                  0.010   bridging integrator 1 isoform 5 
SIX3                  0.009   sine oculis homeobox homolog 3 
FSCB                  0.009   fibrous sheath CABYR binding protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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