Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: GRM5 Sequence: fasta or formatted (1180aa) NCBI GI: 4504143
Description:

glutamate receptor, metabotropic 5 isoform b precursor

Referenced in:

Glutamate

Other entries for this name:
alt prot [1212aa] glutamate receptor, metabotropic 5 isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         95           4
 C cysteine            3.1         37           2
 D aspartate           4.4         52           3
 E glutamate           5.3         62           4
 F phenylalanine       3.6         42           1
 G glycine             7.5         88           2
 H histidine           1.8         21           2
 I isoleucine          6.6         78           3
 K lysine              5.2         61           3
 L leucine             8.4         99           3
 M methionine          2.7         32           2
 N asparagine          3.3         39           1
 P proline             5.6         66           2
 Q glutamine           3.2         38           2
 R arginine            4.7         55           2
 S serine             10.1        119           4
 T threonine           5.4         64           2
 V valine              6.4         76           2
 W tryptophan          1.3         15           1
 Y tyrosine            3.5         41           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutamate receptor, metabotropic 5 isoform b precurso... 
GRM5                  0.993   glutamate receptor, metabotropic 5 isoform a precur...
GRM1                  0.588   glutamate receptor, metabotropic 1 isoform alpha pr...
GRM1                  0.534   glutamate receptor, metabotropic 1 isoform beta pre...
GRM3                  0.276   glutamate receptor, metabotropic 3 precursor 
GRM2                  0.273   glutamate receptor, metabotropic 2 isoform a precurs...
GRM4                  0.268   glutamate receptor, metabotropic 4 
GRM8                  0.267   glutamate receptor, metabotropic 8 isoform b precur...
GRM8                  0.267   glutamate receptor, metabotropic 8 isoform a precur...
GRM7                  0.263   glutamate receptor, metabotropic 7 isoform b precurs...
GRM7                  0.263   glutamate receptor, metabotropic 7 isoform a precurso...
GRM6                  0.248   glutamate receptor, metabotropic 6 precursor 
CASR                  0.155   calcium-sensing receptor 
GPRC6A                0.108   G protein-coupled receptor, family C, group 6, memb...
TAS1R1                0.099   sweet taste receptor T1r isoform b 
TAS1R2                0.085   taste receptor, type 1, member 2 
GRM2                  0.074   glutamate receptor, metabotropic 2 isoform b 
TAS1R1                0.051   sweet taste receptor T1r isoform c 
TAS1R1                0.044   sweet taste receptor T1r isoform a 
TAS1R3                0.043   taste receptor, type 1, member 3 
GABBR2                0.017   G protein-coupled receptor 51 
GABBR1                0.013   gamma-aminobutyric acid (GABA) B receptor 1 isoform...
GPR158                0.012   G protein-coupled receptor 158 
GABBR1                0.012   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
GABBR1                0.012   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
TAS1R1                0.012   sweet taste receptor T1r isoform d 
GPR179                0.011   GPR158-like 1 
BIN1                  0.010   bridging integrator 1 isoform 5 
SIX3                  0.009   sine oculis homeobox homolog 3 
FSCB                  0.009   fibrous sheath CABYR binding protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press