LOC100288108 17689

Name: LOC100288108	Sequence: fasta or formatted (692aa)		NCBI GI: 239743634
Description: PREDICTED: hypothetical protein XP_002342919		Not currently referenced in the text
Other entries for this name: alt mRNA {692aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.1 84 6 C cysteine 1.6 11 2 D aspartate 4.8 33 2 E glutamate 6.8 47 3 F phenylalanine 1.7 12 2 G glycine 11.3 78 2 H histidine 4.6 32 2 I isoleucine 1.4 10 1 K lysine 2.7 19 2 L leucine 10.5 73 3 M methionine 0.7 5 1 N asparagine 1.4 10 1 P proline 8.4 58 3 Q glutamine 5.9 41 2 R arginine 8.2 57 2 S serine 5.2 36 3 T threonine 3.3 23 2 V valine 7.4 51 3 W tryptophan 0.7 5 2 Y tyrosine 1.0 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342919 LOC100288108 1.000 PREDICTED: hypothetical protein SCARF2 0.018 scavenger receptor class F, member 2 isoform 1 [Homo... SCARF2 0.018 scavenger receptor class F, member 2 isoform 2 [Homo... LOC100293375 0.017 PREDICTED: hypothetical protein LOC441056 0.017 PREDICTED: double homeobox, 4-like OGFR 0.016 opioid growth factor receptor LOC100290946 0.015 PREDICTED: hypothetical protein XP_002347121 LOC100288840 0.015 PREDICTED: hypothetical protein XP_002344246 TAF4 0.014 TBP-associated factor 4 LOC440017 0.014 PREDICTED: similar to double homeobox, 4 LOC728022 0.014 PREDICTED: similar to double homeobox, 4 LOC100289581 0.014 PREDICTED: hypothetical protein XP_002343082 LOC440014 0.014 PREDICTED: similar to double homeobox, 4 LOC399839 0.014 PREDICTED: similar to double homeobox, 4 LOC440013 0.014 PREDICTED: similar to double homeobox, 4 TCOF1 0.014 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.014 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.014 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.014 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.014 Treacher Collins-Franceschetti syndrome 1 isoform a ... TCOF1 0.014 Treacher Collins-Franceschetti syndrome 1 isoform c ... SPEG 0.014 SPEG complex locus MAP3K1 0.014 mitogen-activated protein kinase kinase kinase 1 [H... LOC653548 0.014 PREDICTED: double homeobox, 4-like DUX4 0.014 double homeobox, 4 LOC728410 0.014 double homeobox, 4-like LOC653543 0.014 double homeobox, 4-like LOC653545 0.014 double homeobox, 4-like LOC653544 0.014 double homeobox, 4-like Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.