Guide to the Human Genome
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Name: KIF20A Sequence: fasta or formatted (890aa) NCBI GI: 5032013
Description:

kinesin family member 20A

Referenced in:

Kinesins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         48           2
 C cysteine            2.0         18           2
 D aspartate           4.5         40           3
 E glutamate           8.4         75           3
 F phenylalanine       2.8         25           2
 G glycine             5.1         45           2
 H histidine           2.1         19           1
 I isoleucine          4.7         42           1
 K lysine              7.0         62           2
 L leucine            12.5        111           3
 M methionine          1.7         15           1
 N asparagine          3.9         35           2
 P proline             4.4         39           3
 Q glutamine           8.3         74           2
 R arginine            5.4         48           2
 S serine              9.6         85           3
 T threonine           4.9         44           2
 V valine              4.8         43           3
 W tryptophan          0.8          7           1
 Y tyrosine            1.7         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kinesin family member 20A 
KIF20B                0.220   M-phase phosphoprotein 1 
KIF23                 0.132   kinesin family member 23 isoform 1 
KIF23                 0.130   kinesin family member 23 isoform 2 
KIF3A                 0.075   kinesin family member 3A 
KIF13B                0.073   kinesin family member 13B 
KIF3B                 0.072   kinesin family member 3B 
KIF13A                0.072   kinesin family member 13A isoform d 
KIF13A                0.072   kinesin family member 13A isoform c 
KIF13A                0.072   kinesin family member 13A isoform b 
KIF13A                0.072   kinesin family member 13A isoform a 
KIF11                 0.066   kinesin family member 11 
KIF4A                 0.065   kinesin family member 4 
KIF4B                 0.064   kinesin family member 4B 
KIF15                 0.064   kinesin family member 15 
KIF1C                 0.064   kinesin family member 1C 
CENPE                 0.063   centromere protein E 
KIF1B                 0.062   kinesin family member 1B isoform alpha 
KIF1B                 0.062   kinesin family member 1B isoform b 
KIF5A                 0.061   kinesin family member 5A 
KIF1A                 0.060   axonal transport of synaptic vesicles 
KIF17                 0.060   kinesin family member 17 isoform b 
KIF17                 0.060   kinesin family member 17 isoform a 
KIF3C                 0.060   kinesin family member 3C 
KIF16B                0.059   kinesin-like motor protein C20orf23 
KIFC3                 0.058   kinesin family member C3 isoform 2 
KIFC3                 0.058   kinesin family member C3 isoform 3 
KIFC3                 0.058   kinesin family member C3 isoform 1 
KIF5C                 0.058   kinesin family member 5C 
KIF14                 0.058   kinesin family member 14 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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