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Search of human proteins with 118918431
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|118918431 hypothetical protein LOC202134 [Homo sapiens]
(387 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|118918431 hypothetical protein LOC202134 [Homo sapiens] 798 0.0
gi|123701922 hypothetical protein LOC285596 [Homo sapiens] 610 e-175
gi|118601002 hypothetical protein LOC653316 [Homo sapiens] 140 2e-33
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 44 2e-04
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens] 42 0.001
gi|239747793 PREDICTED: protein immuno-reactive with anti-PTH po... 40 0.003
gi|124517695 ankyrin repeat domain 36B [Homo sapiens] 40 0.003
gi|56549111 optineurin [Homo sapiens] 38 0.014
gi|56549109 optineurin [Homo sapiens] 38 0.014
gi|20149572 optineurin [Homo sapiens] 38 0.014
gi|56549107 optineurin [Homo sapiens] 38 0.014
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 38 0.018
gi|209862789 microtubule associated monoxygenase, calponin and L... 38 0.018
gi|239741673 PREDICTED: protein immuno-reactive with anti-PTH po... 37 0.039
gi|239753245 PREDICTED: similar to UPF0634 protein C [Homo sapiens] 35 0.088
gi|63176611 modulator of estrogen induced transcription isoform ... 35 0.088
gi|29171705 melanoma antigen family D, 2 [Homo sapiens] 35 0.088
gi|19387846 melanoma antigen family D, 2 [Homo sapiens] 35 0.088
gi|41350320 melanoma antigen family D, 2 [Homo sapiens] 35 0.088
gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo sa... 35 0.11
gi|21493024 A kinase (PRKA) anchor protein 12 isoform 2 [Homo sa... 35 0.11
gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)... 35 0.15
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 35 0.15
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 35 0.15
gi|33598929 scavenger receptor class F, member 1 isoform 1 precu... 34 0.20
gi|145309306 scavenger receptor class F, member 1 isoform 5 prec... 34 0.20
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 34 0.20
gi|7662244 DAZ interacting protein 3, zinc finger [Homo sapiens] 34 0.26
gi|6005948 WW domain-containing binding protein 4 [Homo sapiens] 34 0.26
gi|87299628 biorientation of chromosomes in cell division 1-like... 33 0.44
>gi|118918431 hypothetical protein LOC202134 [Homo sapiens]
Length = 387
Score = 798 bits (2062), Expect = 0.0
Identities = 387/387 (100%), Positives = 387/387 (100%)
Query: 1 MGCAYSCCLEVCCGEDEIVYPRMPGESTVCHREREKPITYHWYHWHPGHIYPRVASMEDY 60
MGCAYSCCLEVCCGEDEIVYPRMPGESTVCHREREKPITYHWYHWHPGHIYPRVASMEDY
Sbjct: 1 MGCAYSCCLEVCCGEDEIVYPRMPGESTVCHREREKPITYHWYHWHPGHIYPRVASMEDY 60
Query: 61 DEDLVQEASSEDVLGVHMVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQ 120
DEDLVQEASSEDVLGVHMVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQ
Sbjct: 61 DEDLVQEASSEDVLGVHMVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQ 120
Query: 121 CERDEGSLGKPLCPPEILSETLPGSVKKRVCFPSEDHLEEFIAEHLPEASNQSLLTVAHA 180
CERDEGSLGKPLCPPEILSETLPGSVKKRVCFPSEDHLEEFIAEHLPEASNQSLLTVAHA
Sbjct: 121 CERDEGSLGKPLCPPEILSETLPGSVKKRVCFPSEDHLEEFIAEHLPEASNQSLLTVAHA 180
Query: 181 DTGIQTNGDLEDLEEHGPGQTVSEEATEVHMMEGDPDTLAELLIRDVLQELSSYNGEEED 240
DTGIQTNGDLEDLEEHGPGQTVSEEATEVHMMEGDPDTLAELLIRDVLQELSSYNGEEED
Sbjct: 181 DTGIQTNGDLEDLEEHGPGQTVSEEATEVHMMEGDPDTLAELLIRDVLQELSSYNGEEED 240
Query: 241 PEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQVDPATPAKSDLEDLEEHVPGQ 300
PEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQVDPATPAKSDLEDLEEHVPGQ
Sbjct: 241 PEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQVDPATPAKSDLEDLEEHVPGQ 300
Query: 301 TVSEEATGVHMMQVDPATLAKQLEDSTITGSHQQMSASPSSAPAEEATEKTKVEEEVKTR 360
TVSEEATGVHMMQVDPATLAKQLEDSTITGSHQQMSASPSSAPAEEATEKTKVEEEVKTR
Sbjct: 301 TVSEEATGVHMMQVDPATLAKQLEDSTITGSHQQMSASPSSAPAEEATEKTKVEEEVKTR 360
Query: 361 KPKKKTRKPSKKSRWNVLKCWDIFNIF 387
KPKKKTRKPSKKSRWNVLKCWDIFNIF
Sbjct: 361 KPKKKTRKPSKKSRWNVLKCWDIFNIF 387
>gi|123701922 hypothetical protein LOC285596 [Homo sapiens]
Length = 310
Score = 610 bits (1574), Expect = e-175
Identities = 304/310 (98%), Positives = 304/310 (98%)
Query: 78 MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQCERDEGSLGKPLCPPEI 137
MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQCERDEGSLGKPLCPPEI
Sbjct: 1 MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQCERDEGSLGKPLCPPEI 60
Query: 138 LSETLPGSVKKRVCFPSEDHLEEFIAEHLPEASNQSLLTVAHADTGIQTNGDLEDLEEHG 197
LSETLPGSVKKRVCFPSEDHLEEFIAEHLPEASNQSLLTVAHAD G QTNGDLEDLEEHG
Sbjct: 61 LSETLPGSVKKRVCFPSEDHLEEFIAEHLPEASNQSLLTVAHADAGTQTNGDLEDLEEHG 120
Query: 198 PGQTVSEEATEVHMMEGDPDTLAELLIRDVLQELSSYNGEEEDPEEVKTSLGVPQRGDLE 257
PGQTVSEEATEVH MEGDPDTLAE LIRDVLQELSSYNGEEEDPEEVKTSLGVPQRGDLE
Sbjct: 121 PGQTVSEEATEVHTMEGDPDTLAEFLIRDVLQELSSYNGEEEDPEEVKTSLGVPQRGDLE 180
Query: 258 DLEEHVPGQTVSEEATGVHMMQVDPATPAKSDLEDLEEHVPGQTVSEEATGVHMMQVDPA 317
DLEEHVPGQTVSEEATGVHMMQVDPAT AKSDLEDLEEHVP QTVSEEATGVHMMQVDPA
Sbjct: 181 DLEEHVPGQTVSEEATGVHMMQVDPATLAKSDLEDLEEHVPEQTVSEEATGVHMMQVDPA 240
Query: 318 TLAKQLEDSTITGSHQQMSASPSSAPAEEATEKTKVEEEVKTRKPKKKTRKPSKKSRWNV 377
TLAKQLEDSTITGSHQQMSASPSSAPAEEATEKTKVEEEVKTRKPKKKTRKPSKKSRWNV
Sbjct: 241 TLAKQLEDSTITGSHQQMSASPSSAPAEEATEKTKVEEEVKTRKPKKKTRKPSKKSRWNV 300
Query: 378 LKCWDIFNIF 387
LKCWDIFNIF
Sbjct: 301 LKCWDIFNIF 310
Score = 30.0 bits (66), Expect = 3.7
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 13/109 (11%)
Query: 52 PRVASMEDYDEDLVQEASSEDVLGVHMVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEA 111
P+ +ED +E + + SE+ GVHM+ D K L L E H+ Q
Sbjct: 174 PQRGDLEDLEEHVPGQTVSEEATGVHMMQVDPA--TLAKSDLEDLEE-HV-----PEQTV 225
Query: 112 MKTSLGVPQCERDEGSLGKPLCPPEILSETLPGSVKKRVCFPSEDHLEE 160
+ + GV + D +L K ++ T+ GS ++ PS EE
Sbjct: 226 SEEATGVHMMQVDPATLAK-----QLEDSTITGSHQQMSASPSSAPAEE 269
>gi|118601002 hypothetical protein LOC653316 [Homo sapiens]
Length = 114
Score = 140 bits (353), Expect = 2e-33
Identities = 81/130 (62%), Positives = 88/130 (67%), Gaps = 34/130 (26%)
Query: 228 LQELSSYNGEEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQVDPATPAK 287
L+EL Y+ ++ E +KTSLGVPQRGD
Sbjct: 19 LRELHLYSTWKKYQEAMKTSLGVPQRGD-------------------------------- 46
Query: 288 SDLEDLEEHVPGQTVSEEATGVHMMQVDPATLAKQLEDSTITGSHQQMSASPSSAPAEEA 347
LEDLEEH+PGQTVSEEATGVHMMQVDPAT AK+LEDSTITGSHQQMSASPSSAPAEEA
Sbjct: 47 --LEDLEEHLPGQTVSEEATGVHMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPAEEA 104
Query: 348 TEKTKVEEEV 357
TEKTKVEEEV
Sbjct: 105 TEKTKVEEEV 114
Score = 91.7 bits (226), Expect = 1e-18
Identities = 51/67 (76%), Positives = 51/67 (76%), Gaps = 11/67 (16%)
Query: 78 MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQCERDEGSLGKPLCPPEI 137
MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQ G L E
Sbjct: 1 MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQ----RGDL-------ED 49
Query: 138 LSETLPG 144
L E LPG
Sbjct: 50 LEEHLPG 56
Score = 60.1 bits (144), Expect = 3e-09
Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 183 GIQTNGDLEDLEEHGPGQTVSEEATEVHMMEGDPDTLAELLIRDVLQELSSYNGEEEDPE 242
G+ GDLEDLEEH PGQTVSEEAT VHMM+ DP T A+ L E S+ G +
Sbjct: 40 GVPQRGDLEDLEEHLPGQTVSEEATGVHMMQVDPATPAKKL------EDSTITGSHQQMS 93
Query: 243 EVKTSLGVPQRGDLEDLEEHV 263
+S + + +EE V
Sbjct: 94 ASPSSAPAEEATEKTKVEEEV 114
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 43.9 bits (102), Expect = 2e-04
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 26/222 (11%)
Query: 151 CFPSEDHLEEFIAEHLPEASNQSLLTVAHADTGIQTNGDLEDLEEHGPGQTVSEEATEVH 210
C +ED E E ++ + L A+ +Q LE+ +E G+ + EEA ++
Sbjct: 1269 CATNEDEAERDSEEQRASSNLEQL-----AENTVQEEVQLEETKEGTEGEGLQEEAVQLE 1323
Query: 211 MMEGDPDTLAELLIRDVLQELSSYNGEEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVSE 270
+ + E + L+E GE + EE + LE++EE G+ + E
Sbjct: 1324 ETKTEEGLQEEGV---QLEETKETEGEGQQEEEAQ----------LEEIEE-TGGEGLQE 1369
Query: 271 EATGVHMMQVDPATPAKSDLEDLEEHVPGQTVSEEATGVHMMQVDPAT----LAKQLEDS 326
E GV + +V E LEE + + + EE + VH ++ A+ Q +D
Sbjct: 1370 E--GVQLEEVKEGPEGGLQGEALEEGLKEEGLPEEGS-VHGQELSEASSPDGKGSQEDDP 1426
Query: 327 TITGSHQQMSASPSSAPAEEATEKTKVEEEVKTRKPKKKTRK 368
+ SAS PAE E T+ + P R+
Sbjct: 1427 VQEEEAGRASASAEPCPAEGTEEPTEPPSHLSETDPSASERQ 1468
Score = 28.9 bits (63), Expect = 8.2
Identities = 39/174 (22%), Positives = 61/174 (35%), Gaps = 8/174 (4%)
Query: 189 DLEDLEEHGPGQTVSEEA----TEVHMMEGDPDTLAELLIRDVLQELSSYNGEEEDPEEV 244
D+E E G Q SE+ E + A ++ E S E + E+
Sbjct: 1873 DVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDE 1932
Query: 245 KTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQVDPATPAKSDLEDLEEHVPGQTVSE 304
S G + + E+ + GQT E + A P D+E LE V Q
Sbjct: 1933 PESEGAEAQ-EAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEVETQEAEG 1991
Query: 305 EATGVHMMQVDPATLAKQLEDSTITGSHQQMSASPSSAPAEEATEKTKVEEEVK 358
EA V+ +++++ Q S + P E E +VE E +
Sbjct: 1992 EAQ-PESEDVEAPEAEGEMQEA--EEEAQPESDGVEAQPKSEGEEAQEVEGETQ 2042
>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
Length = 825
Score = 41.6 bits (96), Expect = 0.001
Identities = 54/238 (22%), Positives = 101/238 (42%), Gaps = 18/238 (7%)
Query: 136 EILSETLPGSVKKRVCFPSEDHLEEFIAEHLPEASNQSLLTVAHADTGIQTNGDLEDLEE 195
E+L+E LP S ++ PSE+ E + ++ + LL + + + +++ L
Sbjct: 345 ELLAEILPPSAEES---PSEEPPAEILPPPAEKSPSVELLGEIRSPSAQKAPIEVQPL-- 399
Query: 196 HGPGQTVSEEATEVHMMEGDPDTLAELLIRDVLQELSSYNGEEEDPE-EVKTSLGVPQRG 254
P + EEA + +P T+ E L DV L EE E ++ T++ P
Sbjct: 400 --PAEGALEEAPA----KVEPPTVEETLA-DVQPLLPEEAPREEARELQLSTAMETPAEE 452
Query: 255 DLEDLEEHVPGQTVSEEATGVHMMQVDPATPAKSDLEDLEEHVPGQTVSEEATGVHMMQV 314
+ + +P +T +EEA+ +Q+ AT +D E P +SEE +
Sbjct: 453 APTEFQSPLPKETTAEEASA--EIQLLAATEPPADETPAEARSP---LSEETSAEEAHAE 507
Query: 315 DPATLAKQLEDSTITGSHQQMSASPSSAPAEEATEKTKVEEEVKTRKPKKKTRKPSKK 372
+ LA++ + Q ++A + A A ++ + EE + + + PS K
Sbjct: 508 VQSPLAEETTAEEASAEIQLLAAIEAPADETPAEAQSPLSEETSAEEAPAEVQSPSAK 565
>gi|239747793 PREDICTED: protein immuno-reactive with anti-PTH
polyclonal antibodies [Homo sapiens]
Length = 868
Score = 40.4 bits (93), Expect = 0.003
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 16/136 (11%)
Query: 258 DLEEHVPG---QTVSEEATGVHMMQVDPATPAKSDLEDLEEHVPGQTVSEEATGVHMMQV 314
D E VP +T E+ +G Q PA A SD +D ++P + + +G Q
Sbjct: 55 DKENSVPNMATETKDEQISGTVSSQKQPALKATSDKKDSVSNIPTEIKDGQQSGTVSSQK 114
Query: 315 DPA------------TLAKQLEDSTITGSHQQMSASPSSAPAEEATEKTKVEEEVKTRKP 362
PA +A +++D I G+ A +E + + E+K +
Sbjct: 115 QPAWKATSVKKDSVSNIATEIKDGQIRGTVSSQRQPALKATGDEKDSVSNIAREIKDGE- 173
Query: 363 KKKTRKPSKKSRWNVL 378
K T P K+S V+
Sbjct: 174 KSGTVSPQKQSAQKVI 189
>gi|124517695 ankyrin repeat domain 36B [Homo sapiens]
Length = 1121
Score = 40.4 bits (93), Expect = 0.003
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 13/136 (9%)
Query: 255 DLEDLEEHVPGQTVSEEATGVHMMQVDPATPAKSDLEDLEEHVPGQTVSEEATGVHMMQV 314
D ED ++ +T E+ +G Q PA A SD +D ++P + + +G Q
Sbjct: 308 DKEDSVPNMATETKDEQISGTVSCQKQPALKATSDKKDSVSNIPTEIKDGQQSGTVSSQK 367
Query: 315 DPA------------TLAKQLEDSTITGSHQQMSASPSSAPAEEATEKTKVEEEVKTRKP 362
PA +A +++D I G+ +E + + E+K +
Sbjct: 368 QPAWKATSVKKDSVSNIATEIKDGQIRGTVSSQRRPALKTTGDEKDSVSNIAREIKDGE- 426
Query: 363 KKKTRKPSKKSRWNVL 378
K T P K+S V+
Sbjct: 427 KSGTVSPQKQSAQKVI 442
>gi|56549111 optineurin [Homo sapiens]
Length = 577
Score = 38.1 bits (87), Expect = 0.014
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 15/139 (10%)
Query: 221 ELLIRDVLQELSSYNGEEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQV 280
EL + +L E+ E+ E+ K+ L V Q + L+EH EE T +V
Sbjct: 362 ELQVESMLSEIKM---EQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKV 418
Query: 281 DPATPAKSDLEDLEEHVPGQTVSEEATGVHMMQVD--PATLAKQLED-STITGSHQQMSA 337
D A L++L E + ++E+A +Q+D T+AKQ ED T+T QM
Sbjct: 419 DRAV-----LKELSEKL---ELAEKALASKQLQMDEMKQTIAKQEEDLETMTILRAQMEV 470
Query: 338 SPSSAPAEEATEKTKVEEE 356
S AE A + K+ EE
Sbjct: 471 YCSDFHAERAA-REKIHEE 488
>gi|56549109 optineurin [Homo sapiens]
Length = 577
Score = 38.1 bits (87), Expect = 0.014
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 15/139 (10%)
Query: 221 ELLIRDVLQELSSYNGEEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQV 280
EL + +L E+ E+ E+ K+ L V Q + L+EH EE T +V
Sbjct: 362 ELQVESMLSEIKM---EQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKV 418
Query: 281 DPATPAKSDLEDLEEHVPGQTVSEEATGVHMMQVD--PATLAKQLED-STITGSHQQMSA 337
D A L++L E + ++E+A +Q+D T+AKQ ED T+T QM
Sbjct: 419 DRAV-----LKELSEKL---ELAEKALASKQLQMDEMKQTIAKQEEDLETMTILRAQMEV 470
Query: 338 SPSSAPAEEATEKTKVEEE 356
S AE A + K+ EE
Sbjct: 471 YCSDFHAERAA-REKIHEE 488
>gi|20149572 optineurin [Homo sapiens]
Length = 577
Score = 38.1 bits (87), Expect = 0.014
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 15/139 (10%)
Query: 221 ELLIRDVLQELSSYNGEEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQV 280
EL + +L E+ E+ E+ K+ L V Q + L+EH EE T +V
Sbjct: 362 ELQVESMLSEIKM---EQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKV 418
Query: 281 DPATPAKSDLEDLEEHVPGQTVSEEATGVHMMQVD--PATLAKQLED-STITGSHQQMSA 337
D A L++L E + ++E+A +Q+D T+AKQ ED T+T QM
Sbjct: 419 DRAV-----LKELSEKL---ELAEKALASKQLQMDEMKQTIAKQEEDLETMTILRAQMEV 470
Query: 338 SPSSAPAEEATEKTKVEEE 356
S AE A + K+ EE
Sbjct: 471 YCSDFHAERAA-REKIHEE 488
>gi|56549107 optineurin [Homo sapiens]
Length = 577
Score = 38.1 bits (87), Expect = 0.014
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 15/139 (10%)
Query: 221 ELLIRDVLQELSSYNGEEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQV 280
EL + +L E+ E+ E+ K+ L V Q + L+EH EE T +V
Sbjct: 362 ELQVESMLSEIKM---EQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKV 418
Query: 281 DPATPAKSDLEDLEEHVPGQTVSEEATGVHMMQVD--PATLAKQLED-STITGSHQQMSA 337
D A L++L E + ++E+A +Q+D T+AKQ ED T+T QM
Sbjct: 419 DRAV-----LKELSEKL---ELAEKALASKQLQMDEMKQTIAKQEEDLETMTILRAQMEV 470
Query: 338 SPSSAPAEEATEKTKVEEE 356
S AE A + K+ EE
Sbjct: 471 YCSDFHAERAA-REKIHEE 488
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 37.7 bits (86), Expect = 0.018
Identities = 36/122 (29%), Positives = 48/122 (39%), Gaps = 16/122 (13%)
Query: 191 EDLEEHGPGQTVSEEATEVHMMEGDPDTLAE--------------LLIRDVLQELSSYNG 236
E E GP + E TE + E D E LL RD ++ S NG
Sbjct: 819 ETAERVGPERGPLERETEKLLPERQTDVTGEEELTKGKQDREQKQLLARDTQRQESDKNG 878
Query: 237 EEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQVDPATPAKSDLEDLEEH 296
E PE + SL V E E+ V QT+ +A + + P + D +LEE
Sbjct: 879 ESASPERDRESLKVEIETSEEIQEKQVQKQTLPSKAFEREVER--PVANRECDPAELEEK 936
Query: 297 VP 298
VP
Sbjct: 937 VP 938
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 37.7 bits (86), Expect = 0.018
Identities = 55/212 (25%), Positives = 76/212 (35%), Gaps = 47/212 (22%)
Query: 179 HADTGIQTNGDLEDLEEHGPGQTVSEEATEVHMMEGDPDTLAELLIRDVLQELSSYNGEE 238
HA ++ +LE + GPG EE E + E + D D +E SS G +
Sbjct: 970 HALLKGKSEEELEASKSFGPGNEEEEEEEEEYEEEEEED-------YDEEEEESSEAGNQ 1022
Query: 239 E--------DPEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQVDPATPAKSDL 290
DP E++ + + E+ E P S A+ A D
Sbjct: 1023 RLQQVMHAADPLEIQADVHWTHIREREEEERMAPASESS-------------ASGAPLDE 1069
Query: 291 EDLEEHVPGQTVSEEATGVHMMQVDPATLAKQLEDSTITGSHQQMSASPSSA-------- 342
DLEE V + E G DP +L+D Q S SPS A
Sbjct: 1070 NDLEEDVDSEPA--EIEGEAAEDGDPGDTGAELDDD------QHWSDSPSDADRELRLPC 1121
Query: 343 PAEEATE---KTKVEEEVKTRKPKKKTRKPSK 371
PAE E + +EE PK + R PS+
Sbjct: 1122 PAEGEAELELRVSEDEEKLPASPKHQERGPSQ 1153
>gi|239741673 PREDICTED: protein immuno-reactive with anti-PTH
polyclonal antibodies [Homo sapiens]
Length = 1430
Score = 36.6 bits (83), Expect = 0.039
Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 20/138 (14%)
Query: 258 DLEEHVPG---QTVSEEATGVHMMQVDPATPAKSDLEDLEEHVPGQ--------TVSEE- 305
D E VP +T E+ +G Q PA A SD +D ++P + TVS +
Sbjct: 617 DKENSVPNMATETKDEQISGTVSSQKQPALKATSDKKDSVSNIPTEIKDGQQSGTVSSQK 676
Query: 306 -----ATGVHMMQVDPATLAKQLEDSTITGSHQQMSASPSSAPAEEATEKTKVEEEVKTR 360
AT V V + +A +++D I G+ A +E + + E+K
Sbjct: 677 QLAWKATSVKKDSV--SNIATEIKDGQIRGTVSSQRQPALKATGDEKDSVSNIAREIKDG 734
Query: 361 KPKKKTRKPSKKSRWNVL 378
+ K T P K+S V+
Sbjct: 735 E-KSGTVSPQKQSAQKVI 751
>gi|239753245 PREDICTED: similar to UPF0634 protein C [Homo sapiens]
Length = 710
Score = 35.4 bits (80), Expect = 0.088
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 22/134 (16%)
Query: 237 EEEDPEEVKT--SLGVPQRGDLEDLEEHVPGQTVS---EEATGVHMMQVDPATPAKSDLE 291
E++D E+ +T S P + D E+ VP E+ +G Q PA A SD +
Sbjct: 558 EKKDGEKSRTVSSQKQPALKAICDKEDSVPNMATEKKDEQISGTVSSQKQPALKATSDKK 617
Query: 292 DLEEHVPGQTVSEEATGVHMMQVDPA------------TLAKQLEDSTITGSHQQMSASP 339
D ++P + + +G Q PA +A +++D I G + SP
Sbjct: 618 DSVSNIPTEIKDGQQSGTVSSQKQPAWKATSVKKDSVSNIATEIKDGQIRG-----TVSP 672
Query: 340 SSAPAEEATEKTKV 353
A++ K KV
Sbjct: 673 QKQSAQKVIFKKKV 686
>gi|63176611 modulator of estrogen induced transcription isoform a
[Homo sapiens]
Length = 1034
Score = 35.4 bits (80), Expect = 0.088
Identities = 49/229 (21%), Positives = 95/229 (41%), Gaps = 47/229 (20%)
Query: 178 AHADTGIQTNGDLEDLEEHGPGQTVSEEATEVHMMEGDPDTLAELLIRDVLQELSSYNGE 237
AH G N +L+D EE G + + + E+ E + EL+ + ++++ E
Sbjct: 114 AHEQDG---NDELKDSEEFGENEEENVHSKELLSAE-ENKRAHELIEAEGIEDIEK---E 166
Query: 238 EEDPEEVKTSLG------VPQRGDLEDLEEHVPGQTVSEEATGVHMMQVDPATPAKSDL- 290
+ + +E++ G Q G+ E+ E+ + G +G +V P++ L
Sbjct: 167 DIESQEIEAQEGEDDTFLTAQDGEEEENEKDIAG-------SGDGTQEVSKPLPSEGSLA 219
Query: 291 -------EDLEEHVPGQTVSEEATGVHMMQVDPATLAKQLEDSTITGSHQQMSASPSSAP 343
E++E H + ++ V + D TL +D TG + +++ S +S P
Sbjct: 220 EADHTAHEEMEAHTTVKEAEDDNISVTIQAEDAITLDFDGDDLLETGKNVKITDSEASKP 279
Query: 344 AE------EATEKT-------------KVEEEVKTRKPKKKTRKPSKKS 373
+ ++ EK K E+ VK +K+ R+ SKK+
Sbjct: 280 KDGQDAIAQSPEKESKDYEMNANHKDGKKEDCVKGDPVEKEARESSKKA 328
>gi|29171705 melanoma antigen family D, 2 [Homo sapiens]
Length = 606
Score = 35.4 bits (80), Expect = 0.088
Identities = 37/156 (23%), Positives = 62/156 (39%), Gaps = 13/156 (8%)
Query: 227 VLQELSSYNGEEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQVDPATPA 286
++Q L + E PE K S + D++ G + + E + + PAT A
Sbjct: 26 MMQTLLTVTQNVEVPETPKASKALEVSEDVK--VSKASGVSKATEVSKTPEAREAPATQA 83
Query: 287 KSDLEDLEEHVPGQTVSEEATGVHMMQVDP------ATLAKQLE---DSTITGSHQQMSA 337
S + + V A DP AT K++ D+ + Q+ A
Sbjct: 84 SSTTQLTDTQVLAAENKSLAADTKKQNADPQAVTMPATETKKVSHVADTKVNTKAQETEA 143
Query: 338 SPSSAPAEEATEKTKV--EEEVKTRKPKKKTRKPSK 371
+PS APA+E ++ +E + +PK K +K K
Sbjct: 144 APSQAPADEPEPESAAAQSQENQDTRPKVKAKKARK 179
>gi|19387846 melanoma antigen family D, 2 [Homo sapiens]
Length = 606
Score = 35.4 bits (80), Expect = 0.088
Identities = 37/156 (23%), Positives = 62/156 (39%), Gaps = 13/156 (8%)
Query: 227 VLQELSSYNGEEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQVDPATPA 286
++Q L + E PE K S + D++ G + + E + + PAT A
Sbjct: 26 MMQTLLTVTQNVEVPETPKASKALEVSEDVK--VSKASGVSKATEVSKTPEAREAPATQA 83
Query: 287 KSDLEDLEEHVPGQTVSEEATGVHMMQVDP------ATLAKQLE---DSTITGSHQQMSA 337
S + + V A DP AT K++ D+ + Q+ A
Sbjct: 84 SSTTQLTDTQVLAAENKSLAADTKKQNADPQAVTMPATETKKVSHVADTKVNTKAQETEA 143
Query: 338 SPSSAPAEEATEKTKV--EEEVKTRKPKKKTRKPSK 371
+PS APA+E ++ +E + +PK K +K K
Sbjct: 144 APSQAPADEPEPESAAAQSQENQDTRPKVKAKKARK 179
>gi|41350320 melanoma antigen family D, 2 [Homo sapiens]
Length = 606
Score = 35.4 bits (80), Expect = 0.088
Identities = 37/156 (23%), Positives = 62/156 (39%), Gaps = 13/156 (8%)
Query: 227 VLQELSSYNGEEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQVDPATPA 286
++Q L + E PE K S + D++ G + + E + + PAT A
Sbjct: 26 MMQTLLTVTQNVEVPETPKASKALEVSEDVK--VSKASGVSKATEVSKTPEAREAPATQA 83
Query: 287 KSDLEDLEEHVPGQTVSEEATGVHMMQVDP------ATLAKQLE---DSTITGSHQQMSA 337
S + + V A DP AT K++ D+ + Q+ A
Sbjct: 84 SSTTQLTDTQVLAAENKSLAADTKKQNADPQAVTMPATETKKVSHVADTKVNTKAQETEA 143
Query: 338 SPSSAPAEEATEKTKV--EEEVKTRKPKKKTRKPSK 371
+PS APA+E ++ +E + +PK K +K K
Sbjct: 144 APSQAPADEPEPESAAAQSQENQDTRPKVKAKKARK 179
>gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo
sapiens]
Length = 1782
Score = 35.0 bits (79), Expect = 0.11
Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 7/126 (5%)
Query: 122 ERDEGSLGKPLCPPEILSETLPGSVKKRVCFPSEDHLEEFIAEHLPEASNQSLLTVAHAD 181
E + G G P + L ++K + P ED + + + PE N +L AD
Sbjct: 1664 EEEGGGAGTKSVPEDDGHALLAERIEKSLVEPKEDEKGDDVDD--PENQNSAL-----AD 1716
Query: 182 TGIQTNGDLEDLEEHGPGQTVSEEATEVHMMEGDPDTLAELLIRDVLQELSSYNGEEEDP 241
T E + +GP Q E+A EV + EG + ++ I QE E
Sbjct: 1717 TDASGGLTKESPDTNGPKQKEKEDAQEVELQEGKVHSESDKAITPQAQEELQKQERESAK 1776
Query: 242 EEVKTS 247
E+ S
Sbjct: 1777 SELTES 1782
Score = 33.9 bits (76), Expect = 0.26
Identities = 65/281 (23%), Positives = 101/281 (35%), Gaps = 50/281 (17%)
Query: 103 STWKKYQEAMKTSLGVPQCERDEGSLGKPLCPPEILSETLPGSVKKRVCFPSEDHLEEFI 162
ST + QE MK S+ P+ E + + + ++ GS KKR S
Sbjct: 648 STASEMQEEMKGSVEEPKPEEPKRKVDTSVSWEALICV---GSSKKRARRGSSSD----- 699
Query: 163 AEHLPEA--SNQSLLTVAHADTGIQTNGDLEDLEEHGPGQTVSEEATEVHMMEGDPDTLA 220
E P+A + A D T+G L +EH PGQ S EG+ +
Sbjct: 700 EEGGPKAMGGDHQKADEAGKDKETGTDGILAGSQEHDPGQGSSSPEQAGSPTEGEGVSTW 759
Query: 221 ELLIRDVLQELSSYNGEEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQV 280
E R V S + EE E+ GV E P +E + V + +
Sbjct: 760 ESFKRLVTPRKKSKSKLEEKSEDSIAGSGV---------EHSTPDTEPGKEESWVSIKKF 810
Query: 281 DPATPAKSDLEDLEEHVPGQTVSEEATGVHMMQVDPATLAKQLEDSTITGSHQQMSASPS 340
P K + +E P +ED+ TG+++ S P+
Sbjct: 811 IPGRRKKRP-DGKQEQAP------------------------VEDAGPTGANEDDSDVPA 845
Query: 341 SAPAEE--ATEKTKVEEEVKTRKPKKKTRKPSKKSRWNVLK 379
P E A E+ K+E ++ +K +P +K+ V K
Sbjct: 846 VVPLSEYDAVEREKME----AQQAQKSAEQPEQKAATEVSK 882
Score = 31.2 bits (69), Expect = 1.7
Identities = 56/252 (22%), Positives = 88/252 (34%), Gaps = 31/252 (12%)
Query: 130 KPLCPPEILSETLPGSVKKRVCFPSEDHLEEFI----AEHLPEASNQSLLTV-------A 178
+P +++ +T P S +K E + AE L +Q ++
Sbjct: 1104 EPFTQGKVVGQTTPESFEKAPQVTESIESSELVTTCQAETLAGVKSQEMVMEQAIPPDSV 1163
Query: 179 HADTGIQTNGDLEDLEEHGPGQTVSEEATEVH--------MMEGDPDTLAELLIRDVLQE 230
T +T+G + PG T +E E+H G + A ++
Sbjct: 1164 ETPTDSETDGSTPVADFDAPGTTQKDEIVEIHEENEVASGTQSGGTEAEAVPAQKERPPA 1223
Query: 231 LSSYNGEEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVS----EEATGVHMMQVDPATPA 286
SS+ +EE E+ K LE ++ V +TVS E T D T
Sbjct: 1224 PSSFVFQEETKEQSK------MEDTLEHTDKEVSVETVSILSKTEGTQEADQYADEKTKD 1277
Query: 287 KSDLEDLEEHV-PGQTVS-EEATGVHMMQVDPATLAKQLEDSTITGSHQQMSASPSSAPA 344
E LE + G TVS E+ T V + + +D+ SH + SP
Sbjct: 1278 VPFFEGLEGSIDTGITVSREKVTEVALKGEGTEEAECKKDDALELQSHAKSPPSPVEREM 1337
Query: 345 EEATEKTKVEEE 356
E+ K E E
Sbjct: 1338 VVQVEREKTEAE 1349
>gi|21493024 A kinase (PRKA) anchor protein 12 isoform 2 [Homo
sapiens]
Length = 1684
Score = 35.0 bits (79), Expect = 0.11
Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 7/126 (5%)
Query: 122 ERDEGSLGKPLCPPEILSETLPGSVKKRVCFPSEDHLEEFIAEHLPEASNQSLLTVAHAD 181
E + G G P + L ++K + P ED + + + PE N +L AD
Sbjct: 1566 EEEGGGAGTKSVPEDDGHALLAERIEKSLVEPKEDEKGDDVDD--PENQNSAL-----AD 1618
Query: 182 TGIQTNGDLEDLEEHGPGQTVSEEATEVHMMEGDPDTLAELLIRDVLQELSSYNGEEEDP 241
T E + +GP Q E+A EV + EG + ++ I QE E
Sbjct: 1619 TDASGGLTKESPDTNGPKQKEKEDAQEVELQEGKVHSESDKAITPQAQEELQKQERESAK 1678
Query: 242 EEVKTS 247
E+ S
Sbjct: 1679 SELTES 1684
Score = 33.9 bits (76), Expect = 0.26
Identities = 65/281 (23%), Positives = 101/281 (35%), Gaps = 50/281 (17%)
Query: 103 STWKKYQEAMKTSLGVPQCERDEGSLGKPLCPPEILSETLPGSVKKRVCFPSEDHLEEFI 162
ST + QE MK S+ P+ E + + + ++ GS KKR S
Sbjct: 550 STASEMQEEMKGSVEEPKPEEPKRKVDTSVSWEALICV---GSSKKRARRGSSSD----- 601
Query: 163 AEHLPEA--SNQSLLTVAHADTGIQTNGDLEDLEEHGPGQTVSEEATEVHMMEGDPDTLA 220
E P+A + A D T+G L +EH PGQ S EG+ +
Sbjct: 602 EEGGPKAMGGDHQKADEAGKDKETGTDGILAGSQEHDPGQGSSSPEQAGSPTEGEGVSTW 661
Query: 221 ELLIRDVLQELSSYNGEEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQV 280
E R V S + EE E+ GV E P +E + V + +
Sbjct: 662 ESFKRLVTPRKKSKSKLEEKSEDSIAGSGV---------EHSTPDTEPGKEESWVSIKKF 712
Query: 281 DPATPAKSDLEDLEEHVPGQTVSEEATGVHMMQVDPATLAKQLEDSTITGSHQQMSASPS 340
P K + +E P +ED+ TG+++ S P+
Sbjct: 713 IPGRRKKRP-DGKQEQAP------------------------VEDAGPTGANEDDSDVPA 747
Query: 341 SAPAEE--ATEKTKVEEEVKTRKPKKKTRKPSKKSRWNVLK 379
P E A E+ K+E ++ +K +P +K+ V K
Sbjct: 748 VVPLSEYDAVEREKME----AQQAQKSAEQPEQKAATEVSK 784
Score = 31.2 bits (69), Expect = 1.7
Identities = 56/252 (22%), Positives = 88/252 (34%), Gaps = 31/252 (12%)
Query: 130 KPLCPPEILSETLPGSVKKRVCFPSEDHLEEFI----AEHLPEASNQSLLTV-------A 178
+P +++ +T P S +K E + AE L +Q ++
Sbjct: 1006 EPFTQGKVVGQTTPESFEKAPQVTESIESSELVTTCQAETLAGVKSQEMVMEQAIPPDSV 1065
Query: 179 HADTGIQTNGDLEDLEEHGPGQTVSEEATEVH--------MMEGDPDTLAELLIRDVLQE 230
T +T+G + PG T +E E+H G + A ++
Sbjct: 1066 ETPTDSETDGSTPVADFDAPGTTQKDEIVEIHEENEVASGTQSGGTEAEAVPAQKERPPA 1125
Query: 231 LSSYNGEEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVS----EEATGVHMMQVDPATPA 286
SS+ +EE E+ K LE ++ V +TVS E T D T
Sbjct: 1126 PSSFVFQEETKEQSK------MEDTLEHTDKEVSVETVSILSKTEGTQEADQYADEKTKD 1179
Query: 287 KSDLEDLEEHV-PGQTVS-EEATGVHMMQVDPATLAKQLEDSTITGSHQQMSASPSSAPA 344
E LE + G TVS E+ T V + + +D+ SH + SP
Sbjct: 1180 VPFFEGLEGSIDTGITVSREKVTEVALKGEGTEEAECKKDDALELQSHAKSPPSPVEREM 1239
Query: 345 EEATEKTKVEEE 356
E+ K E E
Sbjct: 1240 VVQVEREKTEAE 1251
>gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)
[Homo sapiens]
Length = 731
Score = 34.7 bits (78), Expect = 0.15
Identities = 78/344 (22%), Positives = 135/344 (39%), Gaps = 70/344 (20%)
Query: 47 PGHIYPRVASMEDYDEDLVQEASSEDVLGVHMVDKDTERDIEMKRQLRRLRELHLYST-- 104
PG +YP ED + D+V + GV V+K + + L R + ++ T
Sbjct: 363 PGVVYPS----EDSETDIVLK-------GVVQVEKIKSPEDHIGAVLERAKPEYISKTYK 411
Query: 105 ---WKKYQE-----AMKTSLGVPQCERDEGSLGKPLCPPEILSETLPGSVKKRVCFPSED 156
W+ ++ A +T + E D ++GK +L++ G + F
Sbjct: 412 IDSWENAEDFLEKLAFRTGKLLKGGEPDLQTVGKM-----VLNDWQRGRIP---FFVKPP 463
Query: 157 HLEEFIAEHLPEASNQSLLTVAHADTGIQTNGDLEDLEEHGPG-QTVSEEATEVHMMEGD 215
+ E +A L +S+ ++ A Q N E E G G +++ +E TE + D
Sbjct: 464 NAEPLVAPQLLPSSSLEVVPEA-----AQNNPGEEVTETAGEGSESIIKEETEENS-HCD 517
Query: 216 PDTLAELLIRDVLQELSSYN------GEEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVS 269
+T + ++ V Q N G++ P EV DLEE + ++ S
Sbjct: 518 ANTEMQQILTRVRQNFGKINVVPQFSGDDLVPVEVS------------DLEEEL--ESFS 563
Query: 270 EEATGVHMMQVDPATPAKSDLEDLEEHVPGQTVS-----EEATGVHMMQVDPATLAKQLE 324
+E Q D A + S+ E EE+V T + +E + +D A K
Sbjct: 564 DEEEEEQEQQRDDAEESSSEPE--EENVGNDTKAVIKALDEKIAKYQKFLDKAKAKKFSA 621
Query: 325 DSTITGSHQQMSASPSSAPAEEATEKTKVEEEVKTRKPKKKTRK 368
G +++ A P ++ +EE+V R P KK +K
Sbjct: 622 VRISKGLSEKIFAKPEE-------QRKTLEEDVDDRAPSKKGKK 658
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 34.7 bits (78), Expect = 0.15
Identities = 43/215 (20%), Positives = 91/215 (42%), Gaps = 25/215 (11%)
Query: 168 EASNQSLLTVAHADTGIQTNGDLEDLEEHGPGQTVSEEATEVHMMEGDPDTLAELL---- 223
+A ++ LL V T ++ G+LE++E Q + E+ ++ + + AE
Sbjct: 855 QAKDEELLKVKEKQTKVE--GELEEMERKHQ-QLLEEKNILAEQLQAETELFAEAEEMRA 911
Query: 224 --------IRDVLQELSSYNGEEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGV 275
+ ++L +L S EEE+ ++ + + ++DLEE + EE
Sbjct: 912 RLAAKKQELEEILHDLESRVEEEEERNQILQNEKKKMQAHIQDLEEQ-----LDEEEGAR 966
Query: 276 HMMQVDPATPAKSDLEDLEEHV--PGQTVSEEATGVHMMQVDPATLAKQLEDSTITGSHQ 333
+Q++ T A++ ++ +EE + S+ +M+ A + QL + +
Sbjct: 967 QKLQLEKVT-AEAKIKKMEEEILLLEDQNSKFIKEKKLMEDRIAECSSQLAEEEEKAKNL 1025
Query: 334 QMSASPSSAPAEEATEKTKVEEEVKTRKPKKKTRK 368
+ + E+ K EE KTR+ +K ++
Sbjct: 1026 AKIRNKQEVMISDLEERLKKEE--KTRQELEKAKR 1058
Score = 29.6 bits (65), Expect = 4.8
Identities = 44/201 (21%), Positives = 72/201 (35%), Gaps = 39/201 (19%)
Query: 190 LEDLEEHGPGQTVSEEATEVHMMEGDPDTLAELLIRDVLQELSSYNGEEEDPEEVKTSLG 249
LE+ E+ G + A + +E ELL + Q+L+ + EE K SL
Sbjct: 1296 LEEAEKKG-----IKFAKDAASLESQLQDTQELLQEETRQKLN-LSSRIRQLEEEKNSLQ 1349
Query: 250 VPQRGDLEDLEEHVPGQTVSEEATGVHMMQVDPATPAKSDL---EDLEE---------HV 297
Q EE + + ++ + D DL E LEE
Sbjct: 1350 EQQE------EEEEARKNLEKQVLALQSQLADTKKKVDDDLGTIESLEEAKKKLLKDAEA 1403
Query: 298 PGQTVSEEATGVHMMQVDPATLAKQLEDSTITGSHQ---------------QMSASPSSA 342
Q + E+A ++ L ++L+D T+ HQ Q+ A S
Sbjct: 1404 LSQRLEEKALAYDKLEKTKNRLQQELDDLTVDLDHQRQVASNLEKKQKKFDQLLAEEKSI 1463
Query: 343 PAEEATEKTKVEEEVKTRKPK 363
A A E+ + E E + ++ K
Sbjct: 1464 SARYAEERDRAEAEAREKETK 1484
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 34.7 bits (78), Expect = 0.15
Identities = 37/150 (24%), Positives = 59/150 (39%), Gaps = 20/150 (13%)
Query: 241 PEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQVDPATPAKSDLEDLE---EHV 297
P+ + + PQR + L + Q VS+ M Q+ P P S+L +L HV
Sbjct: 666 PQASSSRMQCPQR---QGLRHNTTSQNVSKRP----MQQMQPTAPRNSNLRELPIAPSHV 718
Query: 298 PGQTVSEEATGVHMMQVDPATLAKQLEDSTITGSHQQMS--------ASPSSAPAEEATE 349
+ S + QV P A + GS ASP + P EEA
Sbjct: 719 IEMS-SSRCSATPSAQVKPIVSASP-PSRAVAGSRSSQGKTEVKVKPASPVAQPKEEAKT 776
Query: 350 KTKVEEEVKTRKPKKKTRKPSKKSRWNVLK 379
+T+ +E + + + + K+ R +LK
Sbjct: 777 ETEFPDEDEETRLYRLKIEEQKRLREEILK 806
>gi|33598929 scavenger receptor class F, member 1 isoform 1
precursor [Homo sapiens]
Length = 830
Score = 34.3 bits (77), Expect = 0.20
Identities = 64/257 (24%), Positives = 97/257 (37%), Gaps = 32/257 (12%)
Query: 119 PQCERDEGSLGKPLCPPEILSETLPGSVKKRVCFPSEDHLEEFIAEHLPEASNQSLLTVA 178
PQ R G L PL P+ LS + R S E E P A++
Sbjct: 600 PQSRRSSGELSSPLRKPKRLSRGAQSGPEGREAEESTGPEEAEAPESFPAAASPGDSATG 659
Query: 179 HADTGIQTNGDLEDLEE-HGPGQTVSEEATEVHMMEGDPDTLAELLIRDVLQELSSY-NG 236
H + E +E G Q S T ++M+ G P +E +R V + S+ G
Sbjct: 660 HRRPPLGGRTVAEHVEAIEGSVQESSGPVTTIYMLAGKPRG-SEGPVRSVFRHFGSFQKG 718
Query: 237 EEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQVDPATPAKSDLEDLEEH 296
+ E +VK ++ P R L + ++ PG A+G + P + K+ L
Sbjct: 719 QAE--AKVKRAIPKPPRQAL-NRKKGSPGL-----ASG--SVGQSPNSAPKAGL------ 762
Query: 297 VPGQTVSEEATGVHMMQVDPATLAKQLEDSTITGSHQQM----SASPSSAPAEEATEKTK 352
PG ATG M V P + L T + Q SP P ++A E+ +
Sbjct: 763 -PG------ATG--PMAVRPEEAVRGLGAGTESSRRAQEPVSGCGSPEQDPQKQAEEERQ 813
Query: 353 VEEEVKTRKPKKKTRKP 369
E E + P + +P
Sbjct: 814 EEPEYENVVPISRPPEP 830
>gi|145309306 scavenger receptor class F, member 1 isoform 5
precursor [Homo sapiens]
Length = 744
Score = 34.3 bits (77), Expect = 0.20
Identities = 64/257 (24%), Positives = 97/257 (37%), Gaps = 32/257 (12%)
Query: 119 PQCERDEGSLGKPLCPPEILSETLPGSVKKRVCFPSEDHLEEFIAEHLPEASNQSLLTVA 178
PQ R G L PL P+ LS + R S E E P A++
Sbjct: 514 PQSRRSSGELSSPLRKPKRLSRGAQSGPEGREAEESTGPEEAEAPESFPAAASPGDSATG 573
Query: 179 HADTGIQTNGDLEDLEE-HGPGQTVSEEATEVHMMEGDPDTLAELLIRDVLQELSSY-NG 236
H + E +E G Q S T ++M+ G P +E +R V + S+ G
Sbjct: 574 HRRPPLGGRTVAEHVEAIEGSVQESSGPVTTIYMLAGKPRG-SEGPVRSVFRHFGSFQKG 632
Query: 237 EEEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQVDPATPAKSDLEDLEEH 296
+ E +VK ++ P R L + ++ PG A+G + P + K+ L
Sbjct: 633 QAE--AKVKRAIPKPPRQAL-NRKKGSPGL-----ASG--SVGQSPNSAPKAGL------ 676
Query: 297 VPGQTVSEEATGVHMMQVDPATLAKQLEDSTITGSHQQM----SASPSSAPAEEATEKTK 352
PG ATG M V P + L T + Q SP P ++A E+ +
Sbjct: 677 -PG------ATG--PMAVRPEEAVRGLGAGTESSRRAQEPVSGCGSPEQDPQKQAEEERQ 727
Query: 353 VEEEVKTRKPKKKTRKP 369
E E + P + +P
Sbjct: 728 EEPEYENVVPISRPPEP 744
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 34.3 bits (77), Expect = 0.20
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Query: 265 GQTVS--EEATGVHMMQVDPATPAKSDLEDLE--EHVPGQTVSEEATGVHMMQVDPATLA 320
GQ +S E + + D A+ +++ L E +P V +E H ++ +
Sbjct: 142 GQVISGQEVVREIENQKTDAASKPFAEVRILSCGELIPKSKVKKEEKKRHKSSSSSSSSS 201
Query: 321 KQLEDSTITGSHQQMSASPSSAPAEEATEKTKVEEEVKTRKPKKKTRKPSKKS 373
+ S+ + S S S S+ + K K + + K +KK RK SKKS
Sbjct: 202 SDSDSSSDSQSSSDSSDSESATEEKSKKRKKKHRKNSRKHKKEKKKRKKSKKS 254
>gi|7662244 DAZ interacting protein 3, zinc finger [Homo sapiens]
Length = 1208
Score = 33.9 bits (76), Expect = 0.26
Identities = 37/185 (20%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 198 PGQTVSEEATEVHMMEGDPDTLAELLIRDVLQELSSYNGEEEDPEEVKTSLGVPQRGDLE 257
P +S+ A + + + L+E+L+ + + S +N + ++ LG+ Q D++
Sbjct: 492 PSSDISKSADILRLCKYRDILLSEILMNGLTE--SQFNSIWKKVSDILLRLGMMQE-DID 548
Query: 258 DLEEHVPGQTVSEEATGVHMMQVDPATPAKSDLEDLEEHVPGQTVSEEATGVHMMQVDPA 317
++E+ P + +S + H + V P ++ + + TG ++++
Sbjct: 549 KVKEN-PIENISLD---YHQLSVYLGIPVPEIIQRMLSCYQQGIALQSITGSQRIEIEEL 604
Query: 318 TLAKQ------LEDSTITGSHQQMSASP-----SSAPAEEATEKTKVEEEVKTRKPKKKT 366
++ +E + SH ++ + +S P+E +TE K +EVK+++ KKK
Sbjct: 605 QNEEEELSPPLMEYNINVKSHPEIQFAEINKDGTSIPSESSTESLKDLQEVKSKQRKKKK 664
Query: 367 RKPSK 371
K K
Sbjct: 665 TKNKK 669
>gi|6005948 WW domain-containing binding protein 4 [Homo sapiens]
Length = 376
Score = 33.9 bits (76), Expect = 0.26
Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Query: 290 LEDLEEHVPGQTVSEEATGVHMMQVDPATLAKQLEDSTITGSHQQMSASPSSAPAEEATE 349
+ ++++ + EE ++ A L ED G ++ PS P
Sbjct: 44 ISEIKQKSLDKAKEEEKASKEFAAMEAAALKAYQEDLKRLGLESEI-LEPSITPVTSTIP 102
Query: 350 KTKVEEEVKTRKPKKKTRKPSKKSRW 375
T + K +K KKK +K K RW
Sbjct: 103 PTSTSNQQKEKKEKKKRKKDPSKGRW 128
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 33.1 bits (74), Expect = 0.44
Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 24/179 (13%)
Query: 200 QTVSEEATEVHMMEGDPDTLAELLIRDV-LQELSSYNGEEEDPEEVKTSLGVPQRGDLED 258
+TV + +++ D D L ++ + V +LSS+ EE+ EEV TS +
Sbjct: 384 KTVEGTKEDFSLIDSDVDGLTDITVSSVHTSDLSSF--EEDTEEEVVTS---------DS 432
Query: 259 LEEHVPGQTVSEEATGVHMMQVDPATPAKSDLEDLEEHVPGQTVSEEATGVHMMQVDPAT 318
+EE G+ S++ + + K+ D E G+T S VH +
Sbjct: 433 MEE---GEITSDDE------EKNKQNKTKTQTSDSSE---GKTKSVRHAYVHKPYLYSKY 480
Query: 319 LAKQLEDSTITGSHQQMSASPSSAPAEEATEKTKVEEEVKTRKPKKKTRKPSKKSRWNV 377
+ ++ T+ Q ++ + K+EE+ K + K K+ K + R +V
Sbjct: 481 YSDSDDELTVEQRRQSIAKEKEERLLRRQINREKLEEKRKQKAEKTKSSKTKGQGRSSV 539
Score = 31.6 bits (70), Expect = 1.3
Identities = 56/301 (18%), Positives = 102/301 (33%), Gaps = 37/301 (12%)
Query: 81 KDTERDIEMKRQLRRLREL-------HLYS-TWKKYQEAMKTSLGVPQCERDEGSLGKPL 132
+D D++ K + LR+ HL + TW + + + Q G L +
Sbjct: 72 RDCLADVDTKPAYQNLRQRVDNFVANHLATHTWSPHLNKNQLRNNIRQQVLKSGMLESGI 131
Query: 133 CPPEILSETLPGSVKKRVCFPSEDHLEEFIA--EHLPEASNQSLLTVAHADTGIQTNGDL 190
I+S+ + + E + EF+A H E S + DT + T G
Sbjct: 132 --DRIISQVVDPKINHTFRPQVEKAVHEFLATLNHKEEGSGNTAPDDEKPDTSLITQG-- 187
Query: 191 EDLEEHGPGQTVSEEATEVHMMEGDPDTLAELLIRDVLQELSSYNGEEEDPEEVKTSLGV 250
+ GP V+ +A + L+ ++S N ++ + S
Sbjct: 188 --VPTPGPSANVANDAMSI------------------LETITSLN---QEASAARASTET 224
Query: 251 PQRGDLEDLEEHVPGQTVSEEATGVHMMQVDPATPAKSDLEDLEEHVPGQTVSEEATGVH 310
E + +P Q ++ +T D A KS + E + SEE + +
Sbjct: 225 SNAKTSERASKKLPSQPTTDTSTDKERTSEDMADKEKSTADSGGEGLETAPKSEEFSDLP 284
Query: 311 MMQVDPATLAKQLEDSTITGSHQQMSASPSSAPAEEATEKTKVEEEVKTRKPKKKTRKPS 370
+ K+ + + Q +S + + EK E RK +KK +
Sbjct: 285 CPVEEIKNYTKEHNNLILLNKDVQQESSEQKNKSTDKGEKKPDSNEKGERKKEKKEKTEK 344
Query: 371 K 371
K
Sbjct: 345 K 345
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.129 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,433,757
Number of Sequences: 37866
Number of extensions: 888051
Number of successful extensions: 3978
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 111
Number of HSP's that attempted gapping in prelim test: 3789
Number of HSP's gapped (non-prelim): 289
length of query: 387
length of database: 18,247,518
effective HSP length: 104
effective length of query: 283
effective length of database: 14,309,454
effective search space: 4049575482
effective search space used: 4049575482
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.