Guide to the Human Genome
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Name: MAGED2 Sequence: fasta or formatted (606aa) NCBI GI: 41350320
Description:

melanoma antigen family D, 2

Referenced in:

Melanoma Antigen Family
Small RNAs in RNA Processing

Other entries for this name:
alt mRNA [606aa] melanoma antigen family D, 2
alt mRNA [606aa] melanoma antigen family D, 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.9         90           3
 C cysteine            0.5          3           1
 D aspartate           4.8         29           1
 E glutamate           7.3         44           2
 F phenylalanine       2.1         13           2
 G glycine             6.6         40           2
 H histidine           0.8          5           2
 I isoleucine          3.3         20           2
 K lysine              8.7         53           2
 L leucine             7.6         46           2
 M methionine          2.0         12           2
 N asparagine          2.5         15           2
 P proline             4.6         28           3
 Q glutamine           4.1         25           1
 R arginine            5.8         35           3
 S serine             10.1         61           3
 T threonine           6.6         40           2
 V valine              4.6         28           1
 W tryptophan          1.2          7           1
 Y tyrosine            2.0         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   melanoma antigen family D, 2 
MAGED2                1.000   melanoma antigen family D, 2 
MAGED2                1.000   melanoma antigen family D, 2 
TRO                   0.367   trophinin isoform 5 
TRO                   0.323   trophinin isoform 2 
TRO                   0.323   trophinin isoform 2 
MAGED1                0.301   melanoma antigen family D, 1 isoform a 
MAGED1                0.301   melanoma antigen family D, 1 isoform b 
MAGED1                0.301   melanoma antigen family D, 1 isoform b 
MAGED4B               0.283   melanoma antigen family D, 4B isoform 2 
MAGED4B               0.283   melanoma antigen family D, 4B isoform 1 
MAGED4B               0.283   melanoma antigen family D, 4B isoform 1 
MAGED4                0.283   melanoma antigen family D, 4 
MAGEF1                0.171   melanoma antigen family F, 1 
NDNL2                 0.170   necdin-like 2 
MAGEL2                0.168   MAGE-like protein 2 
MAGEE1                0.155   melanoma antigen family E, 1 
NDN                   0.145   necdin 
MAGEB10               0.141   melanoma antigen family B, 10 
MAGEB4                0.139   melanoma antigen family B, 4 
MAGEB2                0.138   melanoma antigen family B, 2 
MAGEB3                0.135   melanoma antigen family B, 3 
MAGEB16               0.134   melanoma antigen family B, 16 
MAGEB18               0.132   melanoma antigen family B, 18 
MAGEB17               0.132   PREDICTED: melanoma antigen family B, 17 
MAGEB17               0.132   PREDICTED: melanoma antigen family B, 17 
MAGEB17               0.132   PREDICTED: melanoma antigen family B, 17 
MAGEA10               0.132   melanoma antigen family A, 10 
MAGEA10               0.132   melanoma antigen family A, 10 
MAGEB1                0.131   melanoma antigen family B, 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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