OPTN 11892

Name: OPTN	Sequence: fasta or formatted (577aa)		NCBI GI: 20149572
Description: optineurin		Referenced in: Additional Brain Proteins
Other entries for this name: alt mRNA [577aa] optineurin alt mRNA [577aa] optineurin alt mRNA [577aa] optineurin
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 39 2 C cysteine 1.2 7 1 D aspartate 4.3 25 2 E glutamate 15.8 91 2 F phenylalanine 1.7 10 2 G glycine 3.6 21 2 H histidine 2.6 15 1 I isoleucine 2.9 17 2 K lysine 9.5 55 2 L leucine 11.8 68 3 M methionine 2.9 17 1 N asparagine 3.5 20 2 P proline 2.6 15 2 Q glutamine 6.9 40 2 R arginine 5.2 30 1 S serine 8.0 46 2 T threonine 5.4 31 1 V valine 4.0 23 2 W tryptophan 0.3 2 1 Y tyrosine 0.9 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 optineurin OPTN 1.000 optineurin OPTN 1.000 optineurin OPTN 1.000 optineurin IKBKG 0.107 inhibitor of kappa light polypeptide gene enhancer ... IKBKG 0.107 inhibitor of kappa light polypeptide gene enhancer in... IKBKG 0.107 inhibitor of kappa light polypeptide gene enhancer ... LOC283685 0.058 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC283767 0.055 golgi autoantigen, golgin subfamily a-like MYH14 0.055 myosin, heavy chain 14 isoform 1 MYH14 0.055 myosin, heavy chain 14 isoform 2 MYH14 0.055 myosin, heavy chain 14 isoform 3 CENPE 0.054 centromere protein E MYH11 0.053 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.053 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.053 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.053 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... AKAP9 0.053 A-kinase anchor protein 9 isoform 3 AKAP9 0.051 A-kinase anchor protein 9 isoform 2 LOC283685 0.051 PREDICTED: golgi autoantigen, golgin subfamily a-li... MYH9 0.050 myosin, heavy polypeptide 9, non-muscle EEA1 0.050 early endosome antigen 1, 162kD MYH10 0.049 myosin, heavy polypeptide 10, non-muscle HOOK3 0.048 golgi-associated microtubule-binding protein HOOK3 [... CGNL1 0.048 cingulin-like 1 GOLGA4 0.048 golgi autoantigen, golgin subfamily a, 4 MYH2 0.048 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.048 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH1 0.048 myosin, heavy chain 1, skeletal muscle, adult [Homo... GRIPAP1 0.047 GRIP1 associated protein 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.