Guide to the Human Genome
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Search of human proteins with 239754145

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239754145 PREDICTED: hypothetical protein [Homo sapiens]
         (207 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754145 PREDICTED: hypothetical protein [Homo sapiens]           426   e-120
gi|239748608 PREDICTED: hypothetical protein XP_002346730 [Homo ...   422   e-119
gi|239742626 PREDICTED: hypothetical protein XP_002342598 [Homo ...   422   e-119
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        39   0.004
gi|239749372 PREDICTED: hypothetical protein XP_002347017 [Homo ...    37   0.015
gi|239743509 PREDICTED: hypothetical protein XP_002342878 [Homo ...    37   0.015
gi|239756433 PREDICTED: hypothetical protein [Homo sapiens]            36   0.020
gi|239750970 PREDICTED: hypothetical protein XP_002347634 [Homo ...    36   0.020
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]            36   0.020
gi|239745376 PREDICTED: hypothetical protein XP_002343484 [Homo ...    36   0.020
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]            36   0.020
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi...    36   0.020
gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens]           34   0.100
gi|126352446 elastin isoform d precursor [Homo sapiens]                33   0.13 
gi|126352322 elastin isoform c precursor [Homo sapiens]                33   0.13 
gi|126352700 elastin isoform b precursor [Homo sapiens]                33   0.13 
gi|239741486 PREDICTED: hypothetical protein XP_002342213 [Homo ...    33   0.17 
gi|4758392 forkhead box D1 [Homo sapiens]                              33   0.17 
gi|126352608 elastin isoform e precursor [Homo sapiens]                33   0.22 
gi|126352440 elastin isoform a precursor [Homo sapiens]                33   0.22 
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ...    33   0.22 
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ...    33   0.22 
gi|148762940 DVL-binding protein DAPLE [Homo sapiens]                  33   0.22 
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]            32   0.29 
gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo ...    32   0.29 
gi|166795264 AE binding protein 2 isoform b [Homo sapiens]             32   0.29 
gi|166795262 AE binding protein 2 isoform a [Homo sapiens]             32   0.29 
gi|239755029 PREDICTED: hypothetical protein [Homo sapiens]            32   0.38 
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]            32   0.38 
gi|167614488 TBC1 domain family, member 10B [Homo sapiens]             32   0.38 

>gi|239754145 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 207

 Score =  426 bits (1094), Expect = e-120
 Identities = 207/207 (100%), Positives = 207/207 (100%)

Query: 1   MPSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPRTGEVGAGSRWGR 60
           MPSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPRTGEVGAGSRWGR
Sbjct: 1   MPSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPRTGEVGAGSRWGR 60

Query: 61  GLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQE 120
           GLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQE
Sbjct: 61  GLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQE 120

Query: 121 RTFQKQTINKHRRHTSVKSVPRCELNRGDVMASEWVVNSDGLVRRGLAEQVPLKPKSEGR 180
           RTFQKQTINKHRRHTSVKSVPRCELNRGDVMASEWVVNSDGLVRRGLAEQVPLKPKSEGR
Sbjct: 121 RTFQKQTINKHRRHTSVKSVPRCELNRGDVMASEWVVNSDGLVRRGLAEQVPLKPKSEGR 180

Query: 181 AGTCGRRSLSEPRIAGFPGECQIGQPR 207
           AGTCGRRSLSEPRIAGFPGECQIGQPR
Sbjct: 181 AGTCGRRSLSEPRIAGFPGECQIGQPR 207


>gi|239748608 PREDICTED: hypothetical protein XP_002346730 [Homo
           sapiens]
          Length = 207

 Score =  422 bits (1086), Expect = e-119
 Identities = 206/207 (99%), Positives = 206/207 (99%)

Query: 1   MPSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPRTGEVGAGSRWGR 60
           MPSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAP TGEVGAGSRWGR
Sbjct: 1   MPSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPWTGEVGAGSRWGR 60

Query: 61  GLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQE 120
           GLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQE
Sbjct: 61  GLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQE 120

Query: 121 RTFQKQTINKHRRHTSVKSVPRCELNRGDVMASEWVVNSDGLVRRGLAEQVPLKPKSEGR 180
           RTFQKQTINKHRRHTSVKSVPRCELNRGDVMASEWVVNSDGLVRRGLAEQVPLKPKSEGR
Sbjct: 121 RTFQKQTINKHRRHTSVKSVPRCELNRGDVMASEWVVNSDGLVRRGLAEQVPLKPKSEGR 180

Query: 181 AGTCGRRSLSEPRIAGFPGECQIGQPR 207
           AGTCGRRSLSEPRIAGFPGECQIGQPR
Sbjct: 181 AGTCGRRSLSEPRIAGFPGECQIGQPR 207


>gi|239742626 PREDICTED: hypothetical protein XP_002342598 [Homo
           sapiens]
          Length = 207

 Score =  422 bits (1086), Expect = e-119
 Identities = 206/207 (99%), Positives = 206/207 (99%)

Query: 1   MPSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPRTGEVGAGSRWGR 60
           MPSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAP TGEVGAGSRWGR
Sbjct: 1   MPSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPWTGEVGAGSRWGR 60

Query: 61  GLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQE 120
           GLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQE
Sbjct: 61  GLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQE 120

Query: 121 RTFQKQTINKHRRHTSVKSVPRCELNRGDVMASEWVVNSDGLVRRGLAEQVPLKPKSEGR 180
           RTFQKQTINKHRRHTSVKSVPRCELNRGDVMASEWVVNSDGLVRRGLAEQVPLKPKSEGR
Sbjct: 121 RTFQKQTINKHRRHTSVKSVPRCELNRGDVMASEWVVNSDGLVRRGLAEQVPLKPKSEGR 180

Query: 181 AGTCGRRSLSEPRIAGFPGECQIGQPR 207
           AGTCGRRSLSEPRIAGFPGECQIGQPR
Sbjct: 181 AGTCGRRSLSEPRIAGFPGECQIGQPR 207


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 40/146 (27%), Positives = 58/146 (39%), Gaps = 13/146 (8%)

Query: 14   ARGGAAPPFRVFVAAAERAREARGKS----TVKPPAAPRTGEVGAGSRWGRGLG--GAGK 67
            +R G++P  +    AA RA+     S       P A PR    G+ S+ GRG    G+  
Sbjct: 1596 SRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSK-GRGPSPEGSSS 1654

Query: 68   AQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARK------SWSQSQER 121
             +  PE  P +  +  G+      K  +   P R  +   P   RK      S S S   
Sbjct: 1655 TESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSP 1714

Query: 122  TFQKQTINKHRRHTSVKSVPRCELNR 147
              + +T  +HRR  SV S    E +R
Sbjct: 1715 ETRSRTPPRHRRSPSVSSPEPAEKSR 1740


>gi|239749372 PREDICTED: hypothetical protein XP_002347017 [Homo
           sapiens]
          Length = 212

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 38/125 (30%), Positives = 48/125 (38%), Gaps = 13/125 (10%)

Query: 2   PSAASKGCQGGAARGGAAPPFRVFVAAAER--AREARGKSTVKPPAAPRTGEVGAGSRWG 59
           P+  S      +  GGA        AAA R  A + R    +   A PRT      SR G
Sbjct: 87  PARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAANATPRTPAEAKKSRLG 146

Query: 60  RGLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQ 119
           RG     +A P P  DP    +P     Q++   G L      R  R     RK W + +
Sbjct: 147 RG-----QATPPPPRDPRPGTAP----FQAVG--GTLGGGGTGRRGRGFSVPRKGWRRER 195

Query: 120 ERTFQ 124
           ER FQ
Sbjct: 196 ERAFQ 200


>gi|239743509 PREDICTED: hypothetical protein XP_002342878 [Homo
           sapiens]
          Length = 212

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 38/125 (30%), Positives = 48/125 (38%), Gaps = 13/125 (10%)

Query: 2   PSAASKGCQGGAARGGAAPPFRVFVAAAER--AREARGKSTVKPPAAPRTGEVGAGSRWG 59
           P+  S      +  GGA        AAA R  A + R    +   A PRT      SR G
Sbjct: 87  PARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAANATPRTPAEAKKSRLG 146

Query: 60  RGLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQ 119
           RG     +A P P  DP    +P     Q++   G L      R  R     RK W + +
Sbjct: 147 RG-----QATPPPPRDPRPGTAP----FQAVG--GTLGGGGTGRRGRGFSVPRKGWRRER 195

Query: 120 ERTFQ 124
           ER FQ
Sbjct: 196 ERAFQ 200


>gi|239756433 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 513

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 38/119 (31%), Positives = 45/119 (37%), Gaps = 19/119 (15%)

Query: 2   PSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPR-------TGEVGA 54
           P+AA++     AAR GA P     +  A RAR     +   PP  P         GE   
Sbjct: 283 PAAAARRPLLAAARRGALPAPGALIGPAPRARRPLACTFANPPPPPAGCGSSAPIGEARR 342

Query: 55  GSR---WGRGLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHC 110
           G R   W   LG  G        D  A L PA    +SL KC      A +R P  P C
Sbjct: 343 GERGDHWLPALGRPG--------DWLAGLQPAFGVKRSLRKCARGESSAGAR-PLFPGC 392


>gi|239750970 PREDICTED: hypothetical protein XP_002347634 [Homo
           sapiens]
          Length = 513

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 38/119 (31%), Positives = 45/119 (37%), Gaps = 19/119 (15%)

Query: 2   PSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPR-------TGEVGA 54
           P+AA++     AAR GA P     +  A RAR     +   PP  P         GE   
Sbjct: 283 PAAAARRPLLAAARRGALPAPGALIGPAPRARRPLACTFANPPPPPAGCGSSAPIGEARR 342

Query: 55  GSR---WGRGLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHC 110
           G R   W   LG  G        D  A L PA    +SL KC      A +R P  P C
Sbjct: 343 GERGDHWLPALGRPG--------DWLAGLQPAFGVKRSLRKCARGESSAGAR-PLFPGC 392


>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 37/116 (31%), Positives = 47/116 (40%), Gaps = 17/116 (14%)

Query: 8   GCQGGAARGGAAPPFRVFVAAAERAREAR---GKSTVKPPAAPRTGEVGAGS-------R 57
           G  GGA  GGAA    +  A  +R R+ R   G+  V   A    G  GAG+       R
Sbjct: 823 GVAGGARGGGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGAGAGGGGRRVR 882

Query: 58  WGRGLGGA----GKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPH 109
            G G G A       +    + PAAA + A  GV++    G   RP     P H H
Sbjct: 883 HGHGHGAAVLQRAPCRQQRHLAPAAA-AAAAQGVRAAQ--GRAHRPGAQGAPSHRH 935


>gi|239745376 PREDICTED: hypothetical protein XP_002343484 [Homo
           sapiens]
          Length = 513

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 38/119 (31%), Positives = 45/119 (37%), Gaps = 19/119 (15%)

Query: 2   PSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPR-------TGEVGA 54
           P+AA++     AAR GA P     +  A RAR     +   PP  P         GE   
Sbjct: 283 PAAAARRPLLAAARRGALPAPGALIGPAPRARRPLACTFANPPPPPAGCGSSAPIGEARR 342

Query: 55  GSR---WGRGLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHC 110
           G R   W   LG  G        D  A L PA    +SL KC      A +R P  P C
Sbjct: 343 GERGDHWLPALGRPG--------DWLAGLQPAFGVKRSLRKCARGESSAGAR-PLFPGC 392


>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 37/116 (31%), Positives = 47/116 (40%), Gaps = 17/116 (14%)

Query: 8   GCQGGAARGGAAPPFRVFVAAAERAREAR---GKSTVKPPAAPRTGEVGAGS-------R 57
           G  GGA  GGAA    +  A  +R R+ R   G+  V   A    G  GAG+       R
Sbjct: 823 GVAGGARGGGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGAGAGGGGRRVR 882

Query: 58  WGRGLGGA----GKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPH 109
            G G G A       +    + PAAA + A  GV++    G   RP     P H H
Sbjct: 883 HGHGHGAAVLQRAPCRQQRHLAPAAA-AAAAQGVRAAQ--GRAHRPGAQGAPSHRH 935


>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
           sapiens]
          Length = 674

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 7/110 (6%)

Query: 27  AAAERAREARGKSTVKPPAAPRTGEVGAGSRWGRGLGGAGKAQPLPEVDPAAALSPAGNG 86
           AAA  A  A G +T KPPA P+ G    G   GR      ++        A+  S + + 
Sbjct: 340 AAAAAAAAASGVTTGKPPAPPQPG----GPAPGRNASARRRSSSSSSSSSASRTSSSRSS 395

Query: 87  VQSLNKCGALLRPARSRTPRHPHCARKSWSQSQERTFQ-KQTINKHRRHT 135
            +S ++  +       R+ RH     +SWS+S+ R+ +  ++ ++ RRH+
Sbjct: 396 SRSSSR--SRRGGGYYRSGRHARSRSRSWSRSRSRSRRYSRSRSRGRRHS 443


>gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens]
          Length = 645

 Score = 33.9 bits (76), Expect = 0.100
 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 38  KSTVKPPAAPRTGEVGAGSRWGRGLGGAGKAQPLPEVDPAAALSPAGNGV---QSLNKC- 93
           +S  +PP+ P    V + + WGR LG AG      +V      SP G+ +    SL  C 
Sbjct: 35  RSPSRPPSGPAPSSVHSSNTWGRVLGRAGGGPIDKQVFMPVESSPTGSELCRAVSLGLCR 94

Query: 94  GALLRPARSRTPRHP 108
           G  L   R RT   P
Sbjct: 95  GTFLAVPRVRTRMTP 109


>gi|126352446 elastin isoform d precursor [Homo sapiens]
          Length = 711

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 36/106 (33%), Positives = 42/106 (39%), Gaps = 11/106 (10%)

Query: 4   AASKGCQGG-AARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPRTGEVGAGSRWGRGL 62
           AA  G  GG  A GG   P  V V A   A  A  K+  K   A + G VGA    G G+
Sbjct: 602 AAVPGVLGGLGALGGVGIPGGV-VGAGPAAAAAAAKAAAK---AAQFGLVGAAGLGGLGV 657

Query: 63  GGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHP 108
           GG G    +P V     + PA        K G   RP    +P  P
Sbjct: 658 GGLG----VPGVGGLGGIPPA--AAAKAAKYGVAARPGFGLSPIFP 697


>gi|126352322 elastin isoform c precursor [Homo sapiens]
          Length = 692

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 36/106 (33%), Positives = 42/106 (39%), Gaps = 11/106 (10%)

Query: 4   AASKGCQGG-AARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPRTGEVGAGSRWGRGL 62
           AA  G  GG  A GG   P  V V A   A  A  K+  K   A + G VGA    G G+
Sbjct: 583 AAVPGVLGGLGALGGVGIPGGV-VGAGPAAAAAAAKAAAK---AAQFGLVGAAGLGGLGV 638

Query: 63  GGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHP 108
           GG G    +P V     + PA        K G   RP    +P  P
Sbjct: 639 GGLG----VPGVGGLGGIPPA--AAAKAAKYGVAARPGFGLSPIFP 678


>gi|126352700 elastin isoform b precursor [Homo sapiens]
          Length = 677

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 36/106 (33%), Positives = 42/106 (39%), Gaps = 11/106 (10%)

Query: 4   AASKGCQGG-AARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPRTGEVGAGSRWGRGL 62
           AA  G  GG  A GG   P  V V A   A  A  K+  K   A + G VGA    G G+
Sbjct: 568 AAVPGVLGGLGALGGVGIPGGV-VGAGPAAAAAAAKAAAK---AAQFGLVGAAGLGGLGV 623

Query: 63  GGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHP 108
           GG G    +P V     + PA        K G   RP    +P  P
Sbjct: 624 GGLG----VPGVGGLGGIPPA--AAAKAAKYGVAARPGFGLSPIFP 663


>gi|239741486 PREDICTED: hypothetical protein XP_002342213 [Homo
           sapiens]
          Length = 233

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 4/75 (5%)

Query: 2   PSAASKGCQG-GAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPRT---GEVGAGSR 57
           PS  S+  +G G  RG  A          ERA  +RG+ST    ++P+T   G+  A +R
Sbjct: 139 PSPGSRVGRGLGTGRGKLAHRVAPSKEPPERACGSRGRSTGWAASSPKTHAAGQAPAAAR 198

Query: 58  WGRGLGGAGKAQPLP 72
            GRG G A +    P
Sbjct: 199 SGRGAGPAREGSGAP 213


>gi|4758392 forkhead box D1 [Homo sapiens]
          Length = 465

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 26/83 (31%), Positives = 30/83 (36%)

Query: 8   GCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPRTGEVGAGSRWGRGLGGAGK 67
           GC  G      APP  +F AAA  A  A       PP  P  G     +R   G      
Sbjct: 275 GCGYGLQLPPYAPPSALFAAAAAAAAAAAFHPHSPPPPPPPHGAAAELARTAFGYRPHPL 334

Query: 68  AQPLPEVDPAAALSPAGNGVQSL 90
              LP   PA+A    G G  +L
Sbjct: 335 GAALPGPLPASAAKAGGPGASAL 357



 Score = 29.3 bits (64), Expect = 2.5
 Identities = 32/124 (25%), Positives = 47/124 (37%), Gaps = 14/124 (11%)

Query: 1   MPSAASKGCQGGAAR------------GGAAPPFRVFVAAAERAREARGKSTVKPPAA-P 47
           +P++A+K    GA+             GG+  P     AAA+ A  A+   +  P AA P
Sbjct: 342 LPASAAKAGGPGASALARSPFSIESIIGGSLGPAAAAAAAAQAAAAAQASPSPSPVAAPP 401

Query: 48  RTGEVGAGSRWGRGLG-GAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPR 106
             G  G G      +G  A   + L     AAA S + +        G  L    + T R
Sbjct: 402 APGSSGGGCAAQAAVGPAAALTRSLVAAAAAAASSVSSSAALGTLHQGTALSSVENFTAR 461

Query: 107 HPHC 110
             +C
Sbjct: 462 ISNC 465


>gi|126352608 elastin isoform e precursor [Homo sapiens]
          Length = 705

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 34/90 (37%), Positives = 38/90 (42%), Gaps = 7/90 (7%)

Query: 4   AASKGCQGG-AARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPRTGEVGAGSRWGRGL 62
           AA  G  GG  A GG   P  V V A   A  A  K+  K   A + G VGA    G G+
Sbjct: 578 AAVPGVLGGLGALGGVGIPGGV-VGAGPAAAAAAAKAAAK---AAQFGLVGAAGLGGLGV 633

Query: 63  GGAG--KAQPLPEVDPAAALSPAGNGVQSL 90
           GG G      L  + PAAA   A  G   L
Sbjct: 634 GGLGVPGVGGLGGIPPAAAAKAAKYGAAGL 663


>gi|126352440 elastin isoform a precursor [Homo sapiens]
          Length = 724

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 34/90 (37%), Positives = 38/90 (42%), Gaps = 7/90 (7%)

Query: 4   AASKGCQGG-AARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPRTGEVGAGSRWGRGL 62
           AA  G  GG  A GG   P  V V A   A  A  K+  K   A + G VGA    G G+
Sbjct: 597 AAVPGVLGGLGALGGVGIPGGV-VGAGPAAAAAAAKAAAK---AAQFGLVGAAGLGGLGV 652

Query: 63  GGAG--KAQPLPEVDPAAALSPAGNGVQSL 90
           GG G      L  + PAAA   A  G   L
Sbjct: 653 GGLGVPGVGGLGGIPPAAAAKAAKYGAAGL 682


>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
           sapiens]
          Length = 400

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 33/104 (31%), Positives = 39/104 (37%), Gaps = 19/104 (18%)

Query: 13  AARGGAAPPFRVF---VAAAERAREARGKSTVKPPAAPRT-----GEVGAGSRWGRGLG- 63
           A RG   PP R     V+A   AR  R  S  +    PR      G  G G RW +GLG 
Sbjct: 84  AGRGAQRPPERFLPSSVSAGSAARTLRRGSEARKAQTPRPAGVAQGSGGGGERWLQGLGP 143

Query: 64  ----GAGKAQP------LPEVDPAAALSPAGNGVQSLNKCGALL 97
               G   A P      LP        +PAG   +   K  A+L
Sbjct: 144 PRGRGLSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGGKESAVL 187


>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
           sapiens]
          Length = 400

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 33/104 (31%), Positives = 39/104 (37%), Gaps = 19/104 (18%)

Query: 13  AARGGAAPPFRVF---VAAAERAREARGKSTVKPPAAPRT-----GEVGAGSRWGRGLG- 63
           A RG   PP R     V+A   AR  R  S  +    PR      G  G G RW +GLG 
Sbjct: 84  AGRGAQRPPERFLPSSVSAGSAARTLRRGSEARKAQTPRPAGVAQGSGGGGERWLQGLGP 143

Query: 64  ----GAGKAQP------LPEVDPAAALSPAGNGVQSLNKCGALL 97
               G   A P      LP        +PAG   +   K  A+L
Sbjct: 144 PRGRGLSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGGKESAVL 187


>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
          Length = 2028

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 14/100 (14%)

Query: 2    PSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPRTGEV--------G 53
            P+ A+ G    AA  G+      F  AA  A      +  KP A PR+GEV        G
Sbjct: 1906 PAIATAGAGAAAAGSGSNSQLLHFSPAAAPA------ARTKPKAPPRSGEVATITPVRAG 1959

Query: 54   AGSRWGRGLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKC 93
                 G G+ G G ++ LP   P  +   A +  ++L  C
Sbjct: 1960 LSLSEGDGVPGQGCSEGLPAKSPGRSPDLAPHLGRALEDC 1999


>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 295

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 32/120 (26%), Positives = 44/120 (36%), Gaps = 15/120 (12%)

Query: 4   AASKGCQGGAARGGAAPPFRVFVAAAE-------RAREARGKSTVKP--------PAAPR 48
           A +   +GGA+R  A  P+R              RARE+R  +   P        PA+  
Sbjct: 124 AVTAARRGGASRPLAGEPWREAARRRPQQCPQWGRARESRSAALASPRVSNAPTTPASRN 183

Query: 49  TGEVGAGSRWGRGLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHP 108
            G      + GR   G G A+  P   P    +    G +S    GA  R  R + P  P
Sbjct: 184 PGLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPRP 243


>gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo
           sapiens]
          Length = 224

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 34/120 (28%), Positives = 44/120 (36%), Gaps = 15/120 (12%)

Query: 2   PSAASKGCQGGAARGGAAPPFRVFVAAAER-----AREARGKSTVKP--------PAAPR 48
           P  A++G  GG    G     R  V AA R     ARE+R  +   P        PA+  
Sbjct: 55  PQVAARG--GGRGWEGGGLGARRAVTAARRGEWGRARESRSAALASPRVSNAPTTPASRN 112

Query: 49  TGEVGAGSRWGRGLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHP 108
            G      + GR   G G A+  P   P    +    G +S    GA  R  R + P  P
Sbjct: 113 PGLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPRP 172


>gi|166795264 AE binding protein 2 isoform b [Homo sapiens]
          Length = 517

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 5/77 (6%)

Query: 8  GCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPRTGEVGAGSRWGRGLGGAGK 67
          G  G AARG A PP        E   E   ++          G  G G   G G+GG G+
Sbjct: 23 GSPGSAARGRAEPPEE---EEEEEEEEEEAEAEAVAALLLNGGSGGGGGGGGGGVGG-GE 78

Query: 68 AQPLPEVDPAAALSPAG 84
          A+ + E  P +A S AG
Sbjct: 79 AETMSEPSPESA-SQAG 94


>gi|166795262 AE binding protein 2 isoform a [Homo sapiens]
          Length = 503

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 5/77 (6%)

Query: 8  GCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPRTGEVGAGSRWGRGLGGAGK 67
          G  G AARG A PP        E   E   ++          G  G G   G G+GG G+
Sbjct: 23 GSPGSAARGRAEPPEE---EEEEEEEEEEAEAEAVAALLLNGGSGGGGGGGGGGVGG-GE 78

Query: 68 AQPLPEVDPAAALSPAG 84
          A+ + E  P +A S AG
Sbjct: 79 AETMSEPSPESA-SQAG 94


>gi|239755029 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 183

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 8/59 (13%)

Query: 13  AARGGAAPPFRVF---VAAAERAREARGKSTVKPPAAPRT-----GEVGAGSRWGRGLG 63
           A RG   PP R     V+A   AR  R  S  +    PR      G  G G RW +GLG
Sbjct: 84  AGRGAQRPPERFLPSSVSAGSAARTLRRGSEARKAQTPRPAGVAQGSGGGGERWLQGLG 142


>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 33/115 (28%), Positives = 44/115 (38%), Gaps = 17/115 (14%)

Query: 2   PSAASKGCQGGAARGGAAPPFRV---FVAAAERAREARGKSTVKPPAAPRTGEVGAGSRW 58
           P+ AS+    G   G A PP R      AAA R   A G +   P    R G   A S  
Sbjct: 87  PARASRAA--GRRAGPAGPPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAASSA 144

Query: 59  GRGLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARK 113
           G       ++ P   + P    +  G G +      AL RP  +  PR P  +R+
Sbjct: 145 GT------RSVPARRLPPPCGGTSLGAGSR------ALRRPGSAALPRSPSSSRR 187


>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
          Length = 808

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 5/69 (7%)

Query: 32  AREARGKSTVKPPAAPRTGE-----VGAGSRWGRGLGGAGKAQPLPEVDPAAALSPAGNG 86
           +R A G  T KPP AP+ G      V A S  G+  GG G A         A   P+G G
Sbjct: 158 SRTAPGALTAKPPLAPKPGTTVASGVTARSASGQVTGGHGAAAATSASAGQAPEDPSGPG 217

Query: 87  VQSLNKCGA 95
                 C A
Sbjct: 218 TGPSGTCEA 226


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.131    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,552,464
Number of Sequences: 37866
Number of extensions: 505065
Number of successful extensions: 2901
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 162
Number of HSP's that attempted gapping in prelim test: 2748
Number of HSP's gapped (non-prelim): 296
length of query: 207
length of database: 18,247,518
effective HSP length: 98
effective length of query: 109
effective length of database: 14,536,650
effective search space: 1584494850
effective search space used: 1584494850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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