LOC100293596 22018

Name: LOC100293596	Sequence: fasta or formatted (417aa)		NCBI GI: 239754474
Description: PREDICTED: similar to mucin		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.4 56 4 C cysteine 1.2 5 1 D aspartate 4.3 18 1 E glutamate 8.4 35 3 F phenylalanine 0.0 0 0 G glycine 10.3 43 2 H histidine 1.4 6 1 I isoleucine 0.0 0 0 K lysine 4.8 20 2 L leucine 2.2 9 1 M methionine 0.2 1 1 N asparagine 0.5 2 1 P proline 8.9 37 1 Q glutamine 13.7 57 3 R arginine 14.4 60 2 S serine 9.4 39 3 T threonine 5.0 21 1 V valine 1.2 5 1 W tryptophan 0.5 2 1 Y tyrosine 0.2 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to mucin LOC100134702 0.582 PREDICTED: similar to mucin LOC100288496 0.416 PREDICTED: hypothetical protein XP_002342747 LOC100292370 0.077 PREDICTED: hypothetical protein SRRM2 0.064 splicing coactivator subunit SRm300 FLJ37078 0.063 hypothetical protein LOC222183 ZC3H18 0.057 zinc finger CCCH-type containing 18 NOLC1 0.057 nucleolar and coiled-body phosphoprotein 1 SRRM1 0.057 serine/arginine repetitive matrix 1 RP1L1 0.050 retinitis pigmentosa 1-like 1 FLG 0.049 filaggrin HRNR 0.047 hornerin LOC100286959 0.047 PREDICTED: hypothetical protein XP_002343921 SCAF1 0.046 SR-related CTD-associated factor 1 MARCKS 0.044 myristoylated alanine-rich protein kinase C substra... RPGR 0.044 retinitis pigmentosa GTPase regulator isoform C [Hom... MAGI1 0.043 membrane associated guanylate kinase, WW and PDZ dom... CDC2L5 0.043 cell division cycle 2-like 5 isoform 1 CDC2L5 0.043 cell division cycle 2-like 5 isoform 2 ARID1A 0.042 AT rich interactive domain 1A isoform a ARID1A 0.042 AT rich interactive domain 1A isoform b APC2 0.042 adenomatosis polyposis coli 2 CHGB 0.039 chromogranin B precursor LOC100170229 0.039 hypothetical protein LOC100170229 TCOF1 0.039 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.039 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.039 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.039 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.039 Treacher Collins-Franceschetti syndrome 1 isoform a ... CCDC8 0.038 coiled-coil domain containing 8 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.