Search of human proteins with 239753049

Search of human proteins with 239753049

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239753049 PREDICTED: hypothetical protein [Homo sapiens]
         (183 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753049 PREDICTED: hypothetical protein [Homo sapiens]           378   e-105
gi|239747589 PREDICTED: hypothetical protein XP_002347780 [Homo ...   378   e-105
gi|71040100 arrestin domain containing 2 isoform 2 [Homo sapiens]      32   0.30 
gi|18373305 arrestin domain containing 2 isoform 1 [Homo sapiens]      32   0.30 
gi|169212028 PREDICTED: keratin-associated protein 9-2-like 2-li...    31   0.52 
gi|13994129 keratin associated protein 4-12 [Homo sapiens]             31   0.68 
gi|239751306 PREDICTED: keratin associated protein 4-8 [Homo sap...    30   0.89 
gi|16118240 keratin associated protein 9.2 [Homo sapiens]              30   0.89 
gi|13994368 keratin associated protein 9.3 [Homo sapiens]              30   0.89 
gi|225690544 keratin associated protein 4-11 [Homo sapiens]            30   1.2  
gi|239756792 PREDICTED: hypothetical protein [Homo sapiens]            30   1.5  
gi|239751312 PREDICTED: hypothetical protein [Homo sapiens]            30   1.5  
gi|239745809 PREDICTED: hypothetical protein [Homo sapiens]            30   1.5  
gi|169212012 PREDICTED: keratin-associated protein 9-2-like 1-li...    29   2.0  
gi|239751308 PREDICTED: keratin associated protein 4-9 isoform 1...    29   2.0  
gi|225690551 keratin associated protein 4-9 [Homo sapiens]             29   2.0  
gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]                     29   2.6  
gi|156151402 hypothetical protein LOC80183 [Homo sapiens]              29   2.6  
gi|61835232 growth differentiation factor 7 preproprotein [Homo ...    29   2.6  
gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]                     28   3.4  
gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo ...    28   3.4  
gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]                     28   3.4  
gi|153218552 keratin associated protein 9.8 [Homo sapiens]             28   3.4  
gi|60593038 keratin associated protein 5-4 [Homo sapiens]              28   3.4  
gi|239756877 PREDICTED: hypothetical protein [Homo sapiens]            28   4.4  
gi|239754896 PREDICTED: hypothetical protein XP_002346153 [Homo ...    28   4.4  
gi|239754342 PREDICTED: hypothetical protein [Homo sapiens]            28   4.4  
gi|239751371 PREDICTED: hypothetical protein XP_002347821 [Homo ...    28   4.4  
gi|239749435 PREDICTED: hypothetical protein XP_002347043 [Homo ...    28   4.4  
gi|239745880 PREDICTED: hypothetical protein XP_002343571 [Homo ...    28   4.4  

>gi|239753049 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 183

 Score =  378 bits (970), Expect = e-105
 Identities = 183/183 (100%), Positives = 183/183 (100%)

Query: 1   MAFDQGQEHLEACCRLDRARPPRTVSCCLPFSCRACFWRACRSRAACSSATAASWSRRRL 60
           MAFDQGQEHLEACCRLDRARPPRTVSCCLPFSCRACFWRACRSRAACSSATAASWSRRRL
Sbjct: 1   MAFDQGQEHLEACCRLDRARPPRTVSCCLPFSCRACFWRACRSRAACSSATAASWSRRRL 60

Query: 61  AAVKGLHTVSIRPSTTPKRASTLPSTYSFTIFPLRFWAIISLARGISSWTVSISALGSRR 120
           AAVKGLHTVSIRPSTTPKRASTLPSTYSFTIFPLRFWAIISLARGISSWTVSISALGSRR
Sbjct: 61  AAVKGLHTVSIRPSTTPKRASTLPSTYSFTIFPLRFWAIISLARGISSWTVSISALGSRR 120

Query: 121 RERTTLVARREQEAARAAVGSGQRVRWSDRPQRSPPLGSCSSPSWRLRRWHRFSVRGPLI 180
           RERTTLVARREQEAARAAVGSGQRVRWSDRPQRSPPLGSCSSPSWRLRRWHRFSVRGPLI
Sbjct: 121 RERTTLVARREQEAARAAVGSGQRVRWSDRPQRSPPLGSCSSPSWRLRRWHRFSVRGPLI 180

Query: 181 SFL 183
           SFL
Sbjct: 181 SFL 183


>gi|239747589 PREDICTED: hypothetical protein XP_002347780 [Homo
           sapiens]
          Length = 183

 Score =  378 bits (970), Expect = e-105
 Identities = 183/183 (100%), Positives = 183/183 (100%)

Query: 1   MAFDQGQEHLEACCRLDRARPPRTVSCCLPFSCRACFWRACRSRAACSSATAASWSRRRL 60
           MAFDQGQEHLEACCRLDRARPPRTVSCCLPFSCRACFWRACRSRAACSSATAASWSRRRL
Sbjct: 1   MAFDQGQEHLEACCRLDRARPPRTVSCCLPFSCRACFWRACRSRAACSSATAASWSRRRL 60

Query: 61  AAVKGLHTVSIRPSTTPKRASTLPSTYSFTIFPLRFWAIISLARGISSWTVSISALGSRR 120
           AAVKGLHTVSIRPSTTPKRASTLPSTYSFTIFPLRFWAIISLARGISSWTVSISALGSRR
Sbjct: 61  AAVKGLHTVSIRPSTTPKRASTLPSTYSFTIFPLRFWAIISLARGISSWTVSISALGSRR 120

Query: 121 RERTTLVARREQEAARAAVGSGQRVRWSDRPQRSPPLGSCSSPSWRLRRWHRFSVRGPLI 180
           RERTTLVARREQEAARAAVGSGQRVRWSDRPQRSPPLGSCSSPSWRLRRWHRFSVRGPLI
Sbjct: 121 RERTTLVARREQEAARAAVGSGQRVRWSDRPQRSPPLGSCSSPSWRLRRWHRFSVRGPLI 180

Query: 181 SFL 183
           SFL
Sbjct: 181 SFL 183


>gi|71040100 arrestin domain containing 2 isoform 2 [Homo sapiens]
          Length = 402

 Score = 32.0 bits (71), Expect = 0.30
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 5/57 (8%)

Query: 102 LARGISSWTVSISALGSRRRERTTLVARREQEAARAAVGSGQRVRWSDRPQRSPPLG 158
           L R     T +  A G+R+++R  + +      A   VG GQR  W  R  R PP+G
Sbjct: 211 LPRAAVVQTQTFMARGARKQKRAVVAS-----LAGEPVGPGQRALWQGRALRIPPVG 262


>gi|18373305 arrestin domain containing 2 isoform 1 [Homo sapiens]
          Length = 407

 Score = 32.0 bits (71), Expect = 0.30
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 5/57 (8%)

Query: 102 LARGISSWTVSISALGSRRRERTTLVARREQEAARAAVGSGQRVRWSDRPQRSPPLG 158
           L R     T +  A G+R+++R  + +      A   VG GQR  W  R  R PP+G
Sbjct: 216 LPRAAVVQTQTFMARGARKQKRAVVAS-----LAGEPVGPGQRALWQGRALRIPPVG 267


>gi|169212028 PREDICTED: keratin-associated protein 9-2-like 2-like
           [Homo sapiens]
          Length = 160

 Score = 31.2 bits (69), Expect = 0.52
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 13  CCRLDRARPPRTVSCCLPFSCRA-CFWRACRSRAACSSATAAS 54
           CCR    +P    SCC P  C   C+   C   + C   +  S
Sbjct: 61  CCRTTCCQPTCVTSCCQPSCCSTPCYQPICCGSSCCGQTSCGS 103


>gi|13994129 keratin associated protein 4-12 [Homo sapiens]
          Length = 201

 Score = 30.8 bits (68), Expect = 0.68
 Identities = 26/83 (31%), Positives = 32/83 (38%), Gaps = 17/83 (20%)

Query: 13  CCRLDRARPPRTV-SCCLPFSCRA-------CFWRACRSRAACSSATAASWSR-----RR 59
           CCR    RP   V SCC P  C++       C    C S + C S   +S  R     R 
Sbjct: 110 CCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCCRPSCCISSSCCPSCCESSCCRPCCCLRP 169

Query: 60  LAAVKGLHTVSIRP----STTPK 78
           +      HT   RP    ST P+
Sbjct: 170 VCGRVSCHTTCYRPTCVISTCPR 192



 Score = 27.3 bits (59), Expect = 7.5
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 13 CCRLDRARPPRTV-SCCLPFSCRACFWRACRSRAACSSAT 51
          CCR    RP   V SCC P  C++   +    R +C   T
Sbjct: 30 CCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCCRPSCCQTT 69



 Score = 27.3 bits (59), Expect = 7.5
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 13  CCRLDRARPPRTV-SCCLPFSCRACFWRACRSRAACSSAT 51
           CCR    RP   V SCC P  C++   +    R +C   T
Sbjct: 70  CCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCCRPSCCQTT 109


>gi|239751306 PREDICTED: keratin associated protein 4-8 [Homo
          sapiens]
          Length = 195

 Score = 30.4 bits (67), Expect = 0.89
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%)

Query: 13 CCRLDRARPPRTVSCCL-PFSCRA--CFWRACRSRAACSSATAAS 54
          CCR    RP  +VSCC  P  C++  C    CR R   SS    S
Sbjct: 34 CCRTTCYRPSYSVSCCCRPQCCQSVCCQPTCCRPRCCISSCCRPS 78


>gi|16118240 keratin associated protein 9.2 [Homo sapiens]
          Length = 174

 Score = 30.4 bits (67), Expect = 0.89
 Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 6/50 (12%)

Query: 13  CCRLDRARPPRTVSCCLPFSCR------ACFWRACRSRAACSSATAASWS 56
           CCR    +P    SCC P  C        C   +C  + +C S+   S S
Sbjct: 61  CCRTTCCQPTCVTSCCQPSCCSTPCCQPTCCGSSCCGQTSCGSSCGQSSS 110


>gi|13994368 keratin associated protein 9.3 [Homo sapiens]
          Length = 159

 Score = 30.4 bits (67), Expect = 0.89
 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)

Query: 13  CCRLDRARPPRTVSCCLPFSCR--ACFWRACRSRAACSSATAASWSRR 58
           CCR    +P    SCC P  C    C    C S    SS+ A  + RR
Sbjct: 56  CCRTTCCQPICVTSCCQPSCCSTPCCQPTCCGSSCGQSSSCAPVYCRR 103


>gi|225690544 keratin associated protein 4-11 [Homo sapiens]
          Length = 195

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 3/45 (6%)

Query: 13 CCRLDRARPPRTV-SCCLPFSCRA--CFWRACRSRAACSSATAAS 54
          CCR    RP   V SCC P  C++  C    CR R   SS    S
Sbjct: 34 CCRTTYCRPSCCVSSCCRPQCCQSVCCQPTCCRPRCCISSCCRPS 78


>gi|239756792 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 188

 Score = 29.6 bits (65), Expect = 1.5
 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 13  CCRLDRARPPRTVSCCLPFSCRA-CFWRACRSRAACSSATAAS 54
           CCR    +P    SCC P  C   C    C   + C   +  S
Sbjct: 61  CCRTTCCQPTCVASCCQPSCCSTPCCQPTCCGSSCCGQTSCGS 103


>gi|239751312 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 188

 Score = 29.6 bits (65), Expect = 1.5
 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 13  CCRLDRARPPRTVSCCLPFSCRA-CFWRACRSRAACSSATAAS 54
           CCR    +P    SCC P  C   C    C   + C   +  S
Sbjct: 61  CCRTTCCQPTCVASCCQPSCCSTPCCQPTCCGSSCCGQTSCGS 103


>gi|239745809 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 188

 Score = 29.6 bits (65), Expect = 1.5
 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 13  CCRLDRARPPRTVSCCLPFSCRA-CFWRACRSRAACSSATAAS 54
           CCR    +P    SCC P  C   C    C   + C   +  S
Sbjct: 61  CCRTTCCQPTCVASCCQPSCCSTPCCQPTCCGSSCCGQTSCGS 103


>gi|169212012 PREDICTED: keratin-associated protein 9-2-like
          1-like [Homo sapiens]
          Length = 169

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 6/44 (13%)

Query: 13 CCRLDRARPPRTVSCCLPFSCRA------CFWRACRSRAACSSA 50
          CCR    +P    SCC P  C        C   +C  + +C S+
Sbjct: 56 CCRTTCCQPTCVTSCCQPSCCSTPCCQPICCGSSCCGQTSCGSS 99


>gi|239751308 PREDICTED: keratin associated protein 4-9 isoform 1
          [Homo sapiens]
          Length = 210

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 13 CCRLDRARPPRTVS-CCLPFSCRACFWRACRSRAACSSAT 51
          CCR    RP   VS CC P  C++   +   SR +C   T
Sbjct: 34 CCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCSRPSCCQTT 73


>gi|225690551 keratin associated protein 4-9 [Homo sapiens]
          Length = 210

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 13 CCRLDRARPPRTVS-CCLPFSCRACFWRACRSRAACSSAT 51
          CCR    RP   VS CC P  C++   +   SR +C   T
Sbjct: 34 CCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCSRPSCCQTT 73


>gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]
          Length = 402

 Score = 28.9 bits (63), Expect = 2.6
 Identities = 16/37 (43%), Positives = 19/37 (51%)

Query: 125 TLVARREQEAARAAVGSGQRVRWSDRPQRSPPLGSCS 161
           TLV  +E+E   A V SG     S RP +  PL  CS
Sbjct: 254 TLVRGKEEEHRDALVRSGTSRHHSLRPMKQAPLDECS 290


>gi|156151402 hypothetical protein LOC80183 [Homo sapiens]
          Length = 662

 Score = 28.9 bits (63), Expect = 2.6
 Identities = 14/48 (29%), Positives = 22/48 (45%)

Query: 21  PPRTVSCCLPFSCRACFWRACRSRAACSSATAASWSRRRLAAVKGLHT 68
           P +T +C    +CRACF + C   + C      +  R+ L +V    T
Sbjct: 615 PFQTATCRRCSACRACFHKQCFQSSECPRCARITARRKLLESVASAAT 662


>gi|61835232 growth differentiation factor 7 preproprotein [Homo
           sapiens]
          Length = 450

 Score = 28.9 bits (63), Expect = 2.6
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 114 SALGSRRRERTTLVARREQEAARAAVGSGQRVRWSDRPQRSP 155
           + +G RRR RT L   R  + +    G G   R   R  R P
Sbjct: 312 AVIGGRRRRRTALAGTRTAQGSGGGAGRGHGRRGRSRCSRKP 353


>gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]
          Length = 402

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 16/37 (43%), Positives = 19/37 (51%)

Query: 125 TLVARREQEAARAAVGSGQRVRWSDRPQRSPPLGSCS 161
           TLV  +E+E   A V SG     S RP +  PL  CS
Sbjct: 254 TLVRGKEEEHRDALVRSGTSRHRSLRPMKQAPLDECS 290


>gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo
           sapiens]
          Length = 402

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 16/37 (43%), Positives = 19/37 (51%)

Query: 125 TLVARREQEAARAAVGSGQRVRWSDRPQRSPPLGSCS 161
           TLV  +E+E   A V SG     S RP +  PL  CS
Sbjct: 254 TLVRGKEEEHRDALVRSGTSRHRSLRPMKQAPLDECS 290


>gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]
          Length = 402

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 16/37 (43%), Positives = 19/37 (51%)

Query: 125 TLVARREQEAARAAVGSGQRVRWSDRPQRSPPLGSCS 161
           TLV  +E+E   A V SG     S RP +  PL  CS
Sbjct: 254 TLVRGKEEEHRDALVRSGTSRHRSLRPMKQAPLDECS 290


>gi|153218552 keratin associated protein 9.8 [Homo sapiens]
          Length = 159

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 1/45 (2%)

Query: 13 CCRLDRARPPRTVSCCLPFSCRA-CFWRACRSRAACSSATAASWS 56
          CC+    +P    SCC P  C   C    C  + +C S+   S S
Sbjct: 51 CCQNTCCQPICVTSCCQPSCCSTPCCQPTCCGQTSCGSSCGQSSS 95


>gi|60593038 keratin associated protein 5-4 [Homo sapiens]
          Length = 288

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 26  SCCLPFSCRACFWRACRSRAACSSATAAS 54
           SCC P+ C++   + C S + C S+   S
Sbjct: 238 SCCKPYCCQSSCCKPCCSSSGCGSSCCQS 266


>gi|239756877 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score = 28.1 bits (61), Expect = 4.4
 Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 6/78 (7%)

Query: 18  RARPPRTVSCCL---PFSCRACFWRACRSRAACSSATAASWSRRRLAA-VKGLHTVSIRP 73
           R RPPRT   C       C AC  R+   R   S  +AA     RL     G   +   P
Sbjct: 54  RRRPPRTAPTCSGAPRTRCTACTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQELESLP 113

Query: 74  STTPKRASTLPSTYSFTI 91
              P R  TL S++S  I
Sbjct: 114 PLLPAR--TLTSSFSLLI 129


>gi|239754896 PREDICTED: hypothetical protein XP_002346153 [Homo
           sapiens]
          Length = 156

 Score = 28.1 bits (61), Expect = 4.4
 Identities = 32/129 (24%), Positives = 45/129 (34%), Gaps = 2/129 (1%)

Query: 27  CCLPFSCRACFWRACRSRAACSSATAASWSRRRLAAVKGLHTVSIRPSTTPKRASTLPST 86
           CC P SC  C  R C     CS  + A         V+     S+R  T   R     + 
Sbjct: 28  CCCPHSCYRCRSRCC-CCCRCSWHSYAGPLHGPRGLVRAGGPPSVRGGTHATREPLAAAG 86

Query: 87  YSFTIFPLRFWAIISLARGISSWTVSISALGSRRRERT-TLVARREQEAARAAVGSGQRV 145
                 PL     + L+   S+W        +R R R    V     E+AR A    +  
Sbjct: 87  RWSGFGPLLLQQTLCLSTACSTWEDFTRLPAARARPRVYEPVTPSRGESARLAARRPRPF 146

Query: 146 RWSDRPQRS 154
             S RP+++
Sbjct: 147 PASPRPRKA 155


>gi|239754342 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 235

 Score = 28.1 bits (61), Expect = 4.4
 Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 16 LDRARPPRTVSCCLPFSCRACFWRACRSRAACSSATAA-SWS 56
          L RAR      C  PF C A    A R R     A AA SWS
Sbjct: 55 LPRARVRARPGCRAPFLCTAAVRPAARQRLGSRGAAAATSWS 96


>gi|239751371 PREDICTED: hypothetical protein XP_002347821 [Homo
           sapiens]
          Length = 140

 Score = 28.1 bits (61), Expect = 4.4
 Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 6/78 (7%)

Query: 18  RARPPRTVSCCL---PFSCRACFWRACRSRAACSSATAASWSRRRLAA-VKGLHTVSIRP 73
           R RPPRT   C       C AC  R+   R   S  +AA     RL     G   +   P
Sbjct: 54  RRRPPRTAPTCSGAPRTRCTACTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQELESLP 113

Query: 74  STTPKRASTLPSTYSFTI 91
              P R  TL S++S  I
Sbjct: 114 PLLPAR--TLTSSFSLLI 129


>gi|239749435 PREDICTED: hypothetical protein XP_002347043 [Homo
           sapiens]
          Length = 156

 Score = 28.1 bits (61), Expect = 4.4
 Identities = 32/129 (24%), Positives = 45/129 (34%), Gaps = 2/129 (1%)

Query: 27  CCLPFSCRACFWRACRSRAACSSATAASWSRRRLAAVKGLHTVSIRPSTTPKRASTLPST 86
           CC P SC  C  R C     CS  + A         V+     S+R  T   R     + 
Sbjct: 28  CCCPHSCYRCRSRCC-CCCRCSWHSYAGPLHGPRGLVRAGGPPSVRGGTHATREPLAAAG 86

Query: 87  YSFTIFPLRFWAIISLARGISSWTVSISALGSRRRERT-TLVARREQEAARAAVGSGQRV 145
                 PL     + L+   S+W        +R R R    V     E+AR A    +  
Sbjct: 87  RWSGFGPLLLQQTLCLSTACSTWEDFTRLPAARARPRVYEPVTPSRGESARLAARRPRPF 146

Query: 146 RWSDRPQRS 154
             S RP+++
Sbjct: 147 PASPRPRKA 155


>gi|239745880 PREDICTED: hypothetical protein XP_002343571 [Homo
           sapiens]
          Length = 140

 Score = 28.1 bits (61), Expect = 4.4
 Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 6/78 (7%)

Query: 18  RARPPRTVSCCL---PFSCRACFWRACRSRAACSSATAASWSRRRLAA-VKGLHTVSIRP 73
           R RPPRT   C       C AC  R+   R   S  +AA     RL     G   +   P
Sbjct: 54  RRRPPRTAPTCSGAPRTRCTACTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQELESLP 113

Query: 74  STTPKRASTLPSTYSFTI 91
              P R  TL S++S  I
Sbjct: 114 PLLPAR--TLTSSFSLLI 129


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.131    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,809,377
Number of Sequences: 37866
Number of extensions: 326752
Number of successful extensions: 1790
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 1669
Number of HSP's gapped (non-prelim): 171
length of query: 183
length of database: 18,247,518
effective HSP length: 96
effective length of query: 87
effective length of database: 14,612,382
effective search space: 1271277234
effective search space used: 1271277234
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.