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Search of human proteins with 239752681
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752681 PREDICTED: hypothetical protein [Homo sapiens]
(286 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752681 PREDICTED: hypothetical protein [Homo sapiens] 602 e-172
gi|239747218 PREDICTED: hypothetical protein XP_002346942 [Homo ... 495 e-140
gi|239741026 PREDICTED: hypothetical protein XP_002342071 [Homo ... 394 e-110
gi|148536848 carboxyl ester lipase precursor [Homo sapiens] 49 4e-06
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 45 7e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 45 7e-05
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 45 1e-04
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 44 2e-04
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 43 4e-04
gi|54400749 keratin associated protein 5-1 [Homo sapiens] 42 5e-04
gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 42 5e-04
gi|60593038 keratin associated protein 5-4 [Homo sapiens] 42 5e-04
gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 42 5e-04
gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens] 42 6e-04
gi|60593040 keratin associated protein 5-10 [Homo sapiens] 42 8e-04
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 41 0.001
gi|60279697 keratin associated protein 5-7 [Homo sapiens] 41 0.001
gi|123702038 keratin associated protein 5-9 [Homo sapiens] 40 0.002
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 40 0.002
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 40 0.003
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 40 0.003
gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 40 0.003
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 40 0.003
gi|13994372 keratin associated protein 17-1 [Homo sapiens] 40 0.003
gi|123173777 keratin associated protein 5-8 [Homo sapiens] 40 0.003
gi|8567388 period 3 [Homo sapiens] 39 0.004
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 39 0.004
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 39 0.004
gi|122891874 keratin associated protein 5-5 [Homo sapiens] 39 0.004
gi|122937321 UNC homeobox [Homo sapiens] 39 0.005
>gi|239752681 PREDICTED: hypothetical protein [Homo sapiens]
Length = 286
Score = 602 bits (1552), Expect = e-172
Identities = 286/286 (100%), Positives = 286/286 (100%)
Query: 1 MRGQVQKAHFQKSKPDRRLQLRIGIPGSLDGVSDHPGGAPALSDNGALSPPRAISGSPQN 60
MRGQVQKAHFQKSKPDRRLQLRIGIPGSLDGVSDHPGGAPALSDNGALSPPRAISGSPQN
Sbjct: 1 MRGQVQKAHFQKSKPDRRLQLRIGIPGSLDGVSDHPGGAPALSDNGALSPPRAISGSPQN 60
Query: 61 PTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGS 120
PTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGS
Sbjct: 61 PTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGS 120
Query: 121 PQNPTLSVCTRYITGAVVGAGEGAVDTCFMTGCAEAVTVPSPAEDSAVTGCAGAVTRCLP 180
PQNPTLSVCTRYITGAVVGAGEGAVDTCFMTGCAEAVTVPSPAEDSAVTGCAGAVTRCLP
Sbjct: 121 PQNPTLSVCTRYITGAVVGAGEGAVDTCFMTGCAEAVTVPSPAEDSAVTGCAGAVTRCLP 180
Query: 181 RRRTVRGPACGDRLCGSCDGAFPGGGQCGDRLCRSCDSPFPGGGWCGDRLCGSCDTVPSP 240
RRRTVRGPACGDRLCGSCDGAFPGGGQCGDRLCRSCDSPFPGGGWCGDRLCGSCDTVPSP
Sbjct: 181 RRRTVRGPACGDRLCGSCDGAFPGGGQCGDRLCRSCDSPFPGGGWCGDRLCGSCDTVPSP 240
Query: 241 AGDGAVTGCAGAVTVPSPVGDSAPRLRWQPAPQKHSQMSPELRRED 286
AGDGAVTGCAGAVTVPSPVGDSAPRLRWQPAPQKHSQMSPELRRED
Sbjct: 241 AGDGAVTGCAGAVTVPSPVGDSAPRLRWQPAPQKHSQMSPELRRED 286
>gi|239747218 PREDICTED: hypothetical protein XP_002346942 [Homo
sapiens]
Length = 244
Score = 495 bits (1274), Expect = e-140
Identities = 243/286 (84%), Positives = 243/286 (84%), Gaps = 42/286 (14%)
Query: 1 MRGQVQKAHFQKSKPDRRLQLRIGIPGSLDGVSDHPGGAPALSDNGALSPPRAISGSPQN 60
MRGQVQKAHFQKSKPDRRLQLRIGIPGSLDGVSDHPGGAPAL
Sbjct: 1 MRGQVQKAHFQKSKPDRRLQLRIGIPGSLDGVSDHPGGAPAL------------------ 42
Query: 61 PTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGS 120
S NGALSPPRAISGSPQNPTLSGNGALSPPRAISGS
Sbjct: 43 ------------------------SDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGS 78
Query: 121 PQNPTLSVCTRYITGAVVGAGEGAVDTCFMTGCAEAVTVPSPAEDSAVTGCAGAVTRCLP 180
PQNPTLSVCTRYITGAVVGAGEGAVDTCFMTGCAEAVTVPSPAEDSAVTGCAGAVTRCLP
Sbjct: 79 PQNPTLSVCTRYITGAVVGAGEGAVDTCFMTGCAEAVTVPSPAEDSAVTGCAGAVTRCLP 138
Query: 181 RRRTVRGPACGDRLCGSCDGAFPGGGQCGDRLCRSCDSPFPGGGWCGDRLCGSCDTVPSP 240
RRRTVRGPACGDRLCGSCDGAFPGGGQCGDRLCRSCDSPFPGGGWCGDRLCGSCDTVPSP
Sbjct: 139 RRRTVRGPACGDRLCGSCDGAFPGGGQCGDRLCRSCDSPFPGGGWCGDRLCGSCDTVPSP 198
Query: 241 AGDGAVTGCAGAVTVPSPVGDSAPRLRWQPAPQKHSQMSPELRRED 286
AGDGAVTGCAGAVTVPSPVGDSAPRLRWQPAPQKHSQMSPELRRED
Sbjct: 199 AGDGAVTGCAGAVTVPSPVGDSAPRLRWQPAPQKHSQMSPELRRED 244
>gi|239741026 PREDICTED: hypothetical protein XP_002342071 [Homo
sapiens]
Length = 455
Score = 394 bits (1012), Expect = e-110
Identities = 184/193 (95%), Positives = 186/193 (96%)
Query: 94 RAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSVCTRYITGAVVGAGEGAVDTCFMTGC 153
+ +S NPTLSGNGALSPPRAISGSPQNPTLSVCTRYITGAVVGAGEGAVDT FMTGC
Sbjct: 263 KGLSAGLSNPTLSGNGALSPPRAISGSPQNPTLSVCTRYITGAVVGAGEGAVDTRFMTGC 322
Query: 154 AEAVTVPSPAEDSAVTGCAGAVTRCLPRRRTVRGPACGDRLCGSCDGAFPGGGQCGDRLC 213
AEAVTVPSPAEDSAVTGCAGAVTRCLPR RTVRGPACGDRLCGSCDGAFPGGGQCGDRLC
Sbjct: 323 AEAVTVPSPAEDSAVTGCAGAVTRCLPRWRTVRGPACGDRLCGSCDGAFPGGGQCGDRLC 382
Query: 214 RSCDSPFPGGGWCGDRLCGSCDTVPSPAGDGAVTGCAGAVTVPSPVGDSAPRLRWQPAPQ 273
RSCDSPFPGGGWCGDRLCGSCDTVPSPAGDGAVTGCAGAVTVPSPVGDSAPRLRWQPAPQ
Sbjct: 383 RSCDSPFPGGGWCGDRLCGSCDTVPSPAGDGAVTGCAGAVTVPSPVGDSAPRLRWQPAPQ 442
Query: 274 KHSQMSPELRRED 286
KHSQMSPELRRED
Sbjct: 443 KHSQMSPELRRED 455
>gi|148536848 carboxyl ester lipase precursor [Homo sapiens]
Length = 756
Score = 49.3 bits (116), Expect = 4e-06
Identities = 43/130 (33%), Positives = 56/130 (43%), Gaps = 6/130 (4%)
Query: 40 PALSDNGALS-PPRAISGSPQNPTLSGNGALS-PPRAISGSPQNPTLSGNGALS-PPRAI 96
P D+GA PP SG+P P +GA PP SG+P P +GA PP
Sbjct: 619 PPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGD 678
Query: 97 SGSPQNPTLSGNGALSPPRAISGSPQNPTLSVCTRYITGAVVGAGEGAVDTCFMTGCAEA 156
+G P P +GA PP +G P ++ T V G+ TG +EA
Sbjct: 679 AGPPPVPPTGDSGA--PPVPPTGDSGAPPVTPTGDSETAPVPPTGDSGAPPVPPTGDSEA 736
Query: 157 VTVPSPAEDS 166
VP P +DS
Sbjct: 737 APVP-PTDDS 745
Score = 45.8 bits (107), Expect = 4e-05
Identities = 43/134 (32%), Positives = 55/134 (41%), Gaps = 11/134 (8%)
Query: 40 PALSDNGALS-PPRAISGSPQNPTLSGNGALS-PPRAISGSPQNPTLSGNGALS-PPRAI 96
P D+GA PP SG+P P +GA PP SG+P P +GA PP
Sbjct: 597 PPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGD 656
Query: 97 SGSPQNPTLSGNGALS-PPRAISGSPQNPTLSVCTRYITGA--VVGAGEGAVDTCFMTGC 153
SG+P P +GA PP +G P P +GA V G+ TG
Sbjct: 657 SGAPPVPPTGDSGAPPVPPTGDAGPPPVPPTG-----DSGAPPVPPTGDSGAPPVTPTGD 711
Query: 154 AEAVTVPSPAEDSA 167
+E VP + A
Sbjct: 712 SETAPVPPTGDSGA 725
Score = 39.7 bits (91), Expect = 0.003
Identities = 32/89 (35%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 40 PALSDNGALS-PPRAIS-GSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALS-PPRAI 96
P ++D A PP S +P PT A PP SG+P P +GA PP
Sbjct: 553 PTVTDQEATPVPPTGDSEATPVPPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGD 612
Query: 97 SGSPQNPTLSGNGALS-PPRAISGSPQNP 124
SG+P P +GA PP SG+P P
Sbjct: 613 SGAPPVPPTGDSGAPPVPPTGDSGAPPVP 641
Score = 37.0 bits (84), Expect = 0.020
Identities = 32/91 (35%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 40 PALSDNGALS-PPRAISGSPQNPTLSGNGALS-PPRAISGSPQ-NPTLSGNGALSPPRAI 96
P D+GA PP +G P P +GA PP SG+P PT A PP
Sbjct: 663 PPTGDSGAPPVPPTGDAGPPPVPPTGDSGAPPVPPTGDSGAPPVTPTGDSETAPVPPTGD 722
Query: 97 SGSPQ-NPTLSGNGALSPPRAISGSPQNPTL 126
SG+P PT A PP S Q P +
Sbjct: 723 SGAPPVPPTGDSEAAPVPPTDDSKEAQMPAV 753
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 45.1 bits (105), Expect = 7e-05
Identities = 34/102 (33%), Positives = 37/102 (36%), Gaps = 18/102 (17%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSP---------PRAISGSPQNPTLSG 86
P G P N PP G PQ P G+ + SP P G PQ P G
Sbjct: 57 PQGPPPQGGNKPQGPPPP--GKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPAQG 114
Query: 87 NG----ALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNP 124
A SPP G PQ GN PP G+PQ P
Sbjct: 115 GSKSQSARSPPGKPQGPPQQ---EGNNPQGPPPPAGGNPQQP 153
Score = 43.1 bits (100), Expect = 3e-04
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 51 PRAISGSPQNPTLSGNGALSPPRAISGSPQN-PTLSGNGALSPPRAISGSPQNPTLSGNG 109
P I+G+PQ P+ G P G PQ P GN PP G PQ P G+
Sbjct: 29 PSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPP--PGKPQGPPPQGDK 86
Query: 110 ALSPPRAISGSPQNP 124
+ S PR+ G PQ P
Sbjct: 87 SRS-PRSPPGKPQGP 100
Score = 37.7 bits (86), Expect = 0.012
Identities = 28/79 (35%), Positives = 32/79 (40%), Gaps = 19/79 (24%)
Query: 50 PPRAISGSPQNPTLSGNG----ALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTL 105
PP+ G PQ P G A SPP G PQ GN PP G+PQ P
Sbjct: 101 PPQG--GKPQGPPAQGGSKSQSARSPPGKPQGPPQQ---EGNNPQGPPPPAGGNPQQPQ- 154
Query: 106 SGNGALSPPRAISGSPQNP 124
+PP +G PQ P
Sbjct: 155 ------APP---AGQPQGP 164
Score = 33.9 bits (76), Expect = 0.17
Identities = 30/92 (32%), Positives = 35/92 (38%), Gaps = 25/92 (27%)
Query: 36 PGGAPALSDN---GALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSP 92
P G PA + A SPP G PQ GN PP G+PQ P +P
Sbjct: 107 PQGPPAQGGSKSQSARSPPGKPQGPPQQ---EGNNPQGPPPPAGGNPQQPQ-------AP 156
Query: 93 PRAISGSPQNPTLSGNGALSPPRAISGSPQNP 124
P +G PQ P PP+ G P P
Sbjct: 157 P---AGQPQGPP-------RPPQ--GGRPSRP 176
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 45.1 bits (105), Expect = 7e-05
Identities = 72/260 (27%), Positives = 92/260 (35%), Gaps = 39/260 (15%)
Query: 36 PGGAPAL-SDNGALSPPRAISGSPQN--PTLSGNGALSPPRAISGSPQN---PTLSGNGA 89
P G PA S GA +PP A SP+ T S GA +PP SP+ T GA
Sbjct: 973 PKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGA 1032
Query: 90 LSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSVCTRYITGAVVGAGEGAVDTCF 149
+PP A SP+ G+ A +P G+P P A + + +G T
Sbjct: 1033 STPPAATPPSPK-----GSPAATP--LPKGAPTTP----------AATLPSPKGGPATPS 1075
Query: 150 MTGC--AEAVTVPSPAEDSAVTGCAG-----AVTRCLPRRRTVRGPACGDRLCGSCDGAF 202
+ G A T PSP A G A T P+ P G +
Sbjct: 1076 LKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPS 1135
Query: 203 PGGGQC-----GDRLCRSCDSPFPGGGWCGDRLCGS----CDTVPSPAGDGAVTGCAGAV 253
P GG G + P P GG G+ T PSP G A GA
Sbjct: 1136 PKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAP 1195
Query: 254 TVPSPVGDSAPRLRWQPAPQ 273
T P+ S P+P+
Sbjct: 1196 TTPAATPPSPKGGLATPSPK 1215
Score = 39.3 bits (90), Expect = 0.004
Identities = 46/163 (28%), Positives = 61/163 (37%), Gaps = 16/163 (9%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQN-PTLSGNGALSPPR 94
P APA + S P A++ S S L PP S SP+ PT A++PP
Sbjct: 1567 PKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPT---PPAVTPPS 1623
Query: 95 AISGSPQNPTLSGNGALSP--PRAISGSPQNPTLSVCTRYITGAVVGAGEGAVDTCFMTG 152
G P P G P P ++ SP +P C T V A +G T
Sbjct: 1624 PEKG-PATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGAT--VPQASKGLPAKKGPTA 1680
Query: 153 CAEAVTVPSPAEDSAVTGCAGAVTRCLPRRR---TVRGPACGD 192
E + P+P +T A TR P+ + P C D
Sbjct: 1681 LKEVLVAPAPESTPIIT----APTRKGPQTKKSSATSPPICPD 1719
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 44.7 bits (104), Expect = 1e-04
Identities = 31/99 (31%), Positives = 34/99 (34%), Gaps = 12/99 (12%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPP---------RAISGSPQNPTLSG 86
P G P D PR+ G PQ P G PP G PQ P G
Sbjct: 77 PQGPPPQGDKSR--SPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQG 134
Query: 87 NGALSPPRAISGSPQN-PTLSGNGALSPPRAISGSPQNP 124
R+ G PQ P GN PP G+PQ P
Sbjct: 135 GSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQP 173
Score = 43.1 bits (100), Expect = 3e-04
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 51 PRAISGSPQNPTLSGNGALSPPRAISGSPQN-PTLSGNGALSPPRAISGSPQNPTLSGNG 109
P I+G+PQ P+ G P G PQ P GN PP G PQ P G+
Sbjct: 29 PSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPP--PGKPQGPPPQGDK 86
Query: 110 ALSPPRAISGSPQNP 124
+ S PR+ G PQ P
Sbjct: 87 SRS-PRSPPGKPQGP 100
Score = 41.6 bits (96), Expect = 8e-04
Identities = 32/93 (34%), Positives = 35/93 (37%), Gaps = 19/93 (20%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNG----ALSPPRAISGSPQNPTLSGNGALS 91
P G P N PP G PQ P G A SPP G PQ GN
Sbjct: 107 PQGPPPQGGNKPQGPPPP--GKPQGPPAQGGSKSQSARSPPGKPQGPPQQ---EGNNPQG 161
Query: 92 PPRAISGSPQNPTLSGNGALSPPRAISGSPQNP 124
PP G+PQ P +PP +G PQ P
Sbjct: 162 PPPPAGGNPQQPQ-------APP---AGQPQGP 184
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 43.5 bits (101), Expect = 2e-04
Identities = 32/90 (35%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQN-PTLSGNGALSPPR 94
P G P D PR+ G PQ P G P G PQ P GN PP
Sbjct: 77 PQGPPPQGDKSR--SPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPP 134
Query: 95 AISGSPQNPTLSGNGALSPPRAISGSPQNP 124
G PQ P G+ + S PR+ G PQ P
Sbjct: 135 --PGKPQGPPPQGDKSRS-PRSPPGKPQGP 161
Score = 43.1 bits (100), Expect = 3e-04
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 51 PRAISGSPQNPTLSGNGALSPPRAISGSPQN-PTLSGNGALSPPRAISGSPQNPTLSGNG 109
P I+G+PQ P+ G P G PQ P GN PP G PQ P G+
Sbjct: 29 PSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPP--PGKPQGPPPQGDK 86
Query: 110 ALSPPRAISGSPQNP 124
+ S PR+ G PQ P
Sbjct: 87 SRS-PRSPPGKPQGP 100
Score = 42.7 bits (99), Expect = 4e-04
Identities = 32/90 (35%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRA 95
P G P N PP G PQ P G+ + S PR+ G PQ P G P
Sbjct: 57 PQGPPPQGGNKPQGPPPP--GKPQGPPPQGDKSRS-PRSPPGKPQGPPPQGGNQPQGPPP 113
Query: 96 ISGSPQN-PTLSGNGALSPPRAISGSPQNP 124
G PQ P GN PP G PQ P
Sbjct: 114 PPGKPQGPPPQGGNRPQGPPP--PGKPQGP 141
Score = 41.6 bits (96), Expect = 8e-04
Identities = 32/93 (34%), Positives = 35/93 (37%), Gaps = 19/93 (20%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNG----ALSPPRAISGSPQNPTLSGNGALS 91
P G P N PP G PQ P G A SPP G PQ GN
Sbjct: 240 PQGPPPQGGNKPQGPPPP--GKPQGPPAQGGSKSQSARSPPGKPQGPPQQ---EGNNPQG 294
Query: 92 PPRAISGSPQNPTLSGNGALSPPRAISGSPQNP 124
PP G+PQ P +PP +G PQ P
Sbjct: 295 PPPPAGGNPQQPQ-------APP---AGQPQGP 317
Score = 40.8 bits (94), Expect = 0.001
Identities = 30/89 (33%), Positives = 33/89 (37%), Gaps = 4/89 (4%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRA 95
P G P N PP G PQ P G+ + S PR+ G PQ P G P
Sbjct: 118 PQGPPPQGGNRPQGPPPP--GKPQGPPPQGDKSRS-PRSPPGKPQGPPPQGGNQPQGPPP 174
Query: 96 ISGSPQNPTLSGNGALSPPRAISGSPQNP 124
G PQ P G P G PQ P
Sbjct: 175 PPGKPQGPPPQGGKKPQGPPP-PGKPQGP 202
Score = 37.7 bits (86), Expect = 0.012
Identities = 30/92 (32%), Positives = 33/92 (35%), Gaps = 10/92 (10%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRA 95
P G P D PR+ G PQ P G P G PQ P G P
Sbjct: 138 PQGPPPQGDKSR--SPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPP 195
Query: 96 ISGSPQNPTLSGN---GALSPPRAISGSPQNP 124
G PQ P G+ + SPP G PQ P
Sbjct: 196 -PGKPQGPPPQGDKSRSSQSPP----GKPQGP 222
Score = 36.6 bits (83), Expect = 0.026
Identities = 31/93 (33%), Positives = 33/93 (35%), Gaps = 12/93 (12%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGN---GALSPPRAISGSPQNPTLSGNGALSP 92
P G P PP G PQ P G+ + SPP G PQ P G
Sbjct: 179 PQGPPPQGGKKPQGPPPP--GKPQGPPPQGDKSRSSQSPP----GKPQGPPPQGGNQPQG 232
Query: 93 PRAISGSPQN-PTLSGNGALSPPRAISGSPQNP 124
P G PQ P GN PP G PQ P
Sbjct: 233 PPPPPGKPQGPPPQGGNKPQGPPP--PGKPQGP 263
Score = 35.4 bits (80), Expect = 0.058
Identities = 31/111 (27%), Positives = 32/111 (28%), Gaps = 25/111 (22%)
Query: 36 PGGAPALSDNGALS---------PPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSG 86
P G P D S PP PQ P PP PQ P G
Sbjct: 199 PQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG 258
Query: 87 -------------NGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNP 124
A SPP G PQ GN PP G+PQ P
Sbjct: 259 KPQGPPAQGGSKSQSARSPPGKPQGPPQQ---EGNNPQGPPPPAGGNPQQP 306
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 42.7 bits (99), Expect = 4e-04
Identities = 32/90 (35%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRA 95
P G P N PP G PQ P G+ + S PR+ G PQ P G P
Sbjct: 78 PQGPPPQGGNKPQGPPPP--GKPQGPPPQGDKSRS-PRSPPGKPQGPPPQGGNQPQGPPP 134
Query: 96 ISGSPQN-PTLSGNGALSPPRAISGSPQNP 124
G PQ P GN PP G PQ P
Sbjct: 135 PPGKPQGPPPQGGNKPQGPPP--PGKPQGP 162
Score = 42.7 bits (99), Expect = 4e-04
Identities = 30/90 (33%), Positives = 33/90 (36%), Gaps = 5/90 (5%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQN-PTLSGNGALSPPR 94
P G P D PR+ G PQ P G P G PQ P GN PP
Sbjct: 98 PQGPPPQGDKSR--SPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPP 155
Query: 95 AISGSPQNPTLSGNGALSPPRAISGSPQNP 124
G PQ P G+ R+ G PQ P
Sbjct: 156 --PGKPQGPPPQGDNKSRSSRSPPGKPQGP 183
Score = 42.4 bits (98), Expect = 5e-04
Identities = 30/90 (33%), Positives = 32/90 (35%), Gaps = 5/90 (5%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRA 95
P G P N PP G PQ P G+ R+ G PQ P G P
Sbjct: 201 PQGPPPQGGNKPQGPPPP--GKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPP 258
Query: 96 ISGSPQN-PTLSGNGALSPPRAISGSPQNP 124
G PQ P GN PP G PQ P
Sbjct: 259 PPGKPQGPPPQGGNKPQGPPP--PGKPQGP 286
Score = 42.0 bits (97), Expect = 6e-04
Identities = 30/90 (33%), Positives = 32/90 (35%), Gaps = 5/90 (5%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRA 95
P G P N PP G PQ P G+ R+ G PQ P G P
Sbjct: 139 PQGPPPQGGNKPQGPPPP--GKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPP 196
Query: 96 ISGSPQN-PTLSGNGALSPPRAISGSPQNP 124
G PQ P GN PP G PQ P
Sbjct: 197 PPGKPQGPPPQGGNKPQGPPP--PGKPQGP 224
Score = 41.6 bits (96), Expect = 8e-04
Identities = 30/90 (33%), Positives = 31/90 (34%), Gaps = 5/90 (5%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRA 95
P G P N PP G PQ P G R+ G PQ P G P
Sbjct: 263 PQGPPPQGGNKPQGPPPP--GKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPP 320
Query: 96 ISGSPQN-PTLSGNGALSPPRAISGSPQNP 124
G PQ P GN PP G PQ P
Sbjct: 321 PPGKPQGPPPQGGNKPQGPPP--PGKPQGP 348
Score = 40.8 bits (94), Expect = 0.001
Identities = 32/93 (34%), Positives = 35/93 (37%), Gaps = 19/93 (20%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNG----ALSPPRAISGSPQNPTLSGNGALS 91
P G P N PP G PQ P G A SPP G PQ GN
Sbjct: 325 PQGPPPQGGNKPQGPPPP--GKPQGPPPQGGSKSRSARSPPGKPQGPPQQ---EGNNPQG 379
Query: 92 PPRAISGSPQNPTLSGNGALSPPRAISGSPQNP 124
PP G+PQ P +PP +G PQ P
Sbjct: 380 PPPPAGGNPQQPQ-------APP---AGQPQGP 402
Score = 38.5 bits (88), Expect = 0.007
Identities = 28/76 (36%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 51 PRAISGSPQN-PTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQN-PTLSGN 108
P I+G+PQ P GN PP + G PQ P G P G PQ P GN
Sbjct: 29 PSLIAGNPQGAPPQGGNKPQGPP-SPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN 87
Query: 109 GALSPPRAISGSPQNP 124
PP G PQ P
Sbjct: 88 KPQGPPP--PGKPQGP 101
Score = 38.1 bits (87), Expect = 0.009
Identities = 32/108 (29%), Positives = 34/108 (31%), Gaps = 17/108 (15%)
Query: 27 GSLDGVSDHPGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSG 86
GS S P G P PP PQ P PP PQ P G
Sbjct: 291 GSKSRSSRSPPGKPQ-------GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG 343
Query: 87 NGALSPP---------RAISGSPQN-PTLSGNGALSPPRAISGSPQNP 124
PP R+ G PQ P GN PP G+PQ P
Sbjct: 344 KPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQP 391
Score = 37.4 bits (85), Expect = 0.015
Identities = 29/94 (30%), Positives = 36/94 (38%), Gaps = 12/94 (12%)
Query: 32 VSDHPGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALS 91
++ +P GAP N PP G PQ P G P G PQ P
Sbjct: 32 IAGNPQGAPPQGGNKPQGPPSP-PGKPQGPPPQGGNQPQGPPPPPGKPQGP--------- 81
Query: 92 PPRAISGSPQNPTLSGNGALSPPRA-ISGSPQNP 124
PP+ PQ P G PP+ S SP++P
Sbjct: 82 PPQG-GNKPQGPPPPGKPQGPPPQGDKSRSPRSP 114
Score = 36.2 bits (82), Expect = 0.034
Identities = 32/108 (29%), Positives = 33/108 (30%), Gaps = 19/108 (17%)
Query: 36 PGGAPALSDN---GALSPPRAISG-------SPQNPTLSGNGALSPPRAISGSPQNPTLS 85
P G P DN A SPP G PQ P PP PQ P
Sbjct: 221 PQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP 280
Query: 86 GNGALSPP---------RAISGSPQNPTLSGNGALSPPRAISGSPQNP 124
G PP R+ G PQ P G P G PQ P
Sbjct: 281 GKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 328
Score = 35.8 bits (81), Expect = 0.044
Identities = 30/108 (27%), Positives = 32/108 (29%), Gaps = 19/108 (17%)
Query: 36 PGGAPALSDNGALS----------PPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLS 85
P G P DN + S PP PQ P PP PQ P
Sbjct: 159 PQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP 218
Query: 86 GNGALSPP---------RAISGSPQNPTLSGNGALSPPRAISGSPQNP 124
G PP R+ G PQ P G P G PQ P
Sbjct: 219 GKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 266
Score = 28.5 bits (62), Expect = 7.1
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 13/67 (19%)
Query: 59 QNPTL-SGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAI 117
++P+L +GN +PP+ PQ P SPP G PQ P G P
Sbjct: 27 ESPSLIAGNPQGAPPQG-GNKPQGPP-------SPP----GKPQGPPPQGGNQPQGPPPP 74
Query: 118 SGSPQNP 124
G PQ P
Sbjct: 75 PGKPQGP 81
>gi|54400749 keratin associated protein 5-1 [Homo sapiens]
Length = 278
Score = 42.4 bits (98), Expect = 5e-04
Identities = 33/95 (34%), Positives = 37/95 (38%), Gaps = 8/95 (8%)
Query: 169 TGCAGAVTRCLP---RRRTVRGPACGDRLCGSCDGAFPGGGQCGDRL--CRSCDSPFPGG 223
+ C V C P R T +CG CGS G+ G G CG C SC G
Sbjct: 40 SSCCVPVCCCKPVCCRVPTCSCSSCGKGGCGSSGGSKGGCGSCGGCKGGCGSCGGSKGGC 99
Query: 224 GWCGDRL--CGSCDTVPSPAGDGAVTGCAGAVTVP 256
G CG CGSC G G GC + VP
Sbjct: 100 GSCGGSKGGCGSCGGSKGGCGSGC-GGCGSSCCVP 133
Score = 37.0 bits (84), Expect = 0.020
Identities = 30/90 (33%), Positives = 31/90 (34%), Gaps = 8/90 (8%)
Query: 169 TGCAGAVTRCLPRRRTVRGPACGDRLCGSCDGAFPGGGQCGDRLCRSCDSPFPGGGWCGD 228
+ C V C P V PAC C SC G C C SC G G CG
Sbjct: 128 SSCCVPVCCCKPMCCCV--PACS---CSSCGKGGCGSCGCSKGACGSCGGSKGGCGSCGG 182
Query: 229 RL--CGSCDTVPSPAGDGAVTGCAGAVTVP 256
CGSC G G GC VP
Sbjct: 183 CKGGCGSCGGSKGGCGSGC-GGCGSGCGVP 211
>gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 42.4 bits (98), Expect = 5e-04
Identities = 35/100 (35%), Positives = 38/100 (38%), Gaps = 9/100 (9%)
Query: 26 PGSLDG-VSDHPGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTL 84
P + DG +D P P P G PQ P G G PP+ G PQ P
Sbjct: 58 PSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQG-GHPPPPQ---GRPQGPPQ 113
Query: 85 SGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNP 124
G G PPR G PQ P G PP G PQ P
Sbjct: 114 QG-GHPRPPR---GRPQGPPQQGGHQQGPPPPPPGKPQGP 149
Score = 40.0 bits (92), Expect = 0.002
Identities = 30/83 (36%), Positives = 32/83 (38%), Gaps = 9/83 (10%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRA 95
P G P G PP+ G PQ P G G PPR G PQ P G PP
Sbjct: 91 PQGPP--QQGGHPPPPQ---GRPQGPPQQG-GHPRPPR---GRPQGPPQQGGHQQGPPPP 141
Query: 96 ISGSPQNPTLSGNGALSPPRAIS 118
G PQ P G PP+ S
Sbjct: 142 PPGKPQGPPPQGGRPQGPPQGQS 164
>gi|60593038 keratin associated protein 5-4 [Homo sapiens]
Length = 288
Score = 42.4 bits (98), Expect = 5e-04
Identities = 28/68 (41%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 188 PACGDRLCGSCDGAFPGGGQCGDRL--CRSCDSPFPGGGWCGDRL--CGSCDTVPSPAGD 243
PAC CGSC G+ G G CG C SC G G CG CGSC S G
Sbjct: 64 PACSCSSCGSCGGSKGGYGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCGSCG--GSKGGC 121
Query: 244 GAVTGCAG 251
G+ G G
Sbjct: 122 GSCGGSKG 129
Score = 38.1 bits (87), Expect = 0.009
Identities = 32/117 (27%), Positives = 40/117 (34%), Gaps = 13/117 (11%)
Query: 135 GAVVGAGEGAVDTCFMTGCAEAVTVPSPAEDSAVTGCAGAVTRCLPRRRTVRGPACGDRL 194
G V G G+ C G ++ V C G+ C +CG
Sbjct: 129 GGCVSCG-GSKGGCGSCGGSKGGCVSCGGSKGGCGSCGGSKGGC---------GSCGGSK 178
Query: 195 --CGSCDGAFPGGGQCGDRLCRSCDSPFPGGGWCGDRLCGSCDTVPSPAGDGAVTGC 249
CGSC G+ G G CG C SC P CG C S P + G + C
Sbjct: 179 GGCGSCGGSKGGCGSCGCSQC-SCCKPCCCSSGCGSSCCQSSCCKPCCSSSGCGSSC 234
Score = 35.8 bits (81), Expect = 0.044
Identities = 37/133 (27%), Positives = 45/133 (33%), Gaps = 16/133 (12%)
Query: 135 GAVVGAGEGAVDTCFMTGCAEAVTVPSPAEDSAVTG-----------CAGAVTRCLPRRR 183
G G G C C + V PA + G C G+ C+
Sbjct: 37 GCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGGYGSCGGSKGGCVSCGG 96
Query: 184 TVRG-PACGDRL--CGSCDGAFPGGGQCGDRL--CRSCDSPFPGGGWCGDRLCGSCDTVP 238
+ G +CG CGSC G+ G G CG C SC G G CG G
Sbjct: 97 SKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCVSCGG 156
Query: 239 SPAGDGAVTGCAG 251
S G G+ G G
Sbjct: 157 SKGGCGSCGGSKG 169
Score = 33.5 bits (75), Expect = 0.22
Identities = 24/61 (39%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
Query: 195 CGSCDGAFPGGGQCGDRL--CRSCDSPFPGGGWCGDRL--CGSCDTVPSPAGDGAVTGCA 250
C SC G+ G G CG C SC G G CG CGSC S G G+ G
Sbjct: 131 CVSCGGSKGGCGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCGSCG--GSKGGCGSCGGSK 188
Query: 251 G 251
G
Sbjct: 189 G 189
Score = 31.6 bits (70), Expect = 0.84
Identities = 24/63 (38%), Positives = 24/63 (38%), Gaps = 15/63 (23%)
Query: 170 GCAGAVTRCLPRRRTVRGPACGDRLCGS-CDGAFPGGGQCGDRLCRSCDSPFPGGGWCGD 228
GC G C G CG CGS C G G G CG C C S G G CG
Sbjct: 2 GCCGCSGGC--------GSGCGG--CGSGCGGCGSGCGGCGSG-CGGCGS---GCGGCGS 47
Query: 229 RLC 231
C
Sbjct: 48 SCC 50
>gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 42.4 bits (98), Expect = 5e-04
Identities = 35/100 (35%), Positives = 38/100 (38%), Gaps = 9/100 (9%)
Query: 26 PGSLDG-VSDHPGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTL 84
P + DG +D P P P G PQ P G G PP+ G PQ P
Sbjct: 58 PSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQG-GHPPPPQ---GRPQGPPQ 113
Query: 85 SGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNP 124
G G PPR G PQ P G PP G PQ P
Sbjct: 114 QG-GHPRPPR---GRPQGPPQQGGHQQGPPPPPPGKPQGP 149
Score = 40.0 bits (92), Expect = 0.002
Identities = 30/83 (36%), Positives = 32/83 (38%), Gaps = 9/83 (10%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRA 95
P G P G PP+ G PQ P G G PPR G PQ P G PP
Sbjct: 91 PQGPP--QQGGHPPPPQ---GRPQGPPQQG-GHPRPPR---GRPQGPPQQGGHQQGPPPP 141
Query: 96 ISGSPQNPTLSGNGALSPPRAIS 118
G PQ P G PP+ S
Sbjct: 142 PPGKPQGPPPQGGRPQGPPQGQS 164
>gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]
Length = 166
Score = 42.0 bits (97), Expect = 6e-04
Identities = 35/100 (35%), Positives = 37/100 (37%), Gaps = 9/100 (9%)
Query: 26 PGSLDGVSDH-PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTL 84
P + DG D P P P G PQ P G G PP+ G PQ P
Sbjct: 58 PSAGDGNQDDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQG-GHPPPPQ---GRPQGPPQ 113
Query: 85 SGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNP 124
G G PPR G PQ P G PP G PQ P
Sbjct: 114 QG-GHPRPPR---GRPQGPPQQGGHQQGPPPPPPGKPQGP 149
Score = 40.0 bits (92), Expect = 0.002
Identities = 30/83 (36%), Positives = 32/83 (38%), Gaps = 9/83 (10%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRA 95
P G P G PP+ G PQ P G G PPR G PQ P G PP
Sbjct: 91 PQGPP--QQGGHPPPPQ---GRPQGPPQQG-GHPRPPR---GRPQGPPQQGGHQQGPPPP 141
Query: 96 ISGSPQNPTLSGNGALSPPRAIS 118
G PQ P G PP+ S
Sbjct: 142 PPGKPQGPPPQGGRPQGPPQGQS 164
>gi|60593040 keratin associated protein 5-10 [Homo sapiens]
Length = 202
Score = 41.6 bits (96), Expect = 8e-04
Identities = 35/106 (33%), Positives = 40/106 (37%), Gaps = 16/106 (15%)
Query: 152 GCAEAVTVPSPAEDSAVTGCAGAVTRCLPRRRTVRGPACGDRL--CGSCDGAFPGGGQCG 209
GC + VP C V C+P +CG CGSC G+ G G CG
Sbjct: 37 GCGSSCCVP--------VCCCKPVCCCVPACSCSSCGSCGGSKGDCGSCGGSKGGCGSCG 88
Query: 210 DRL--CRSCDSPFPGGGWCGDRL--CGSCDTVPSPAGDGAVTGCAG 251
C SC G G CG CGSC S G G+ G G
Sbjct: 89 GSKGGCGSCGGSKGGCGSCGGSKGGCGSCG--GSKGGCGSCGGSKG 132
Score = 32.3 bits (72), Expect = 0.49
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 6/40 (15%)
Query: 195 CGSCDGAFPGGGQCGDRLCRSCDSPFPGGGWCGDRLCGSC 234
CGSC G+ G G CG C C C CGSC
Sbjct: 124 CGSCGGSKGGCGSCGCSQCNCCKP------CCCSSGCGSC 157
Score = 29.3 bits (64), Expect = 4.1
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 8/51 (15%)
Query: 195 CGSCDGAFPGGGQCGDRLCRSCDSPFPGGGWCGDRLCGSCDTVPSPAGDGA 245
CGSC G+ G C SC G G CG C C +G G+
Sbjct: 114 CGSCGGSKGG--------CGSCGGSKGGCGSCGCSQCNCCKPCCCSSGCGS 156
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 41.2 bits (95), Expect = 0.001
Identities = 25/89 (28%), Positives = 29/89 (32%), Gaps = 1/89 (1%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRA 95
P G P N + PP G P+ P G P G P+ P G P
Sbjct: 162 PEGPPPQGGNQSQGPPPH-PGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPP 220
Query: 96 ISGSPQNPTLSGNGALSPPRAISGSPQNP 124
G P+ P G P G PQ P
Sbjct: 221 RPGKPEGPPSQGGNKPQGPPPHPGKPQGP 249
Score = 40.4 bits (93), Expect = 0.002
Identities = 24/89 (26%), Positives = 29/89 (32%), Gaps = 1/89 (1%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRA 95
P G P N + PP G P+ P G P G P+ P G P
Sbjct: 99 PEGQPPQGGNQSQGPPPR-PGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPP 157
Query: 96 ISGSPQNPTLSGNGALSPPRAISGSPQNP 124
G P+ P G P G P+ P
Sbjct: 158 RPGKPEGPPPQGGNQSQGPPPHPGKPEGP 186
Score = 40.4 bits (93), Expect = 0.002
Identities = 24/89 (26%), Positives = 29/89 (32%), Gaps = 1/89 (1%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRA 95
P G P N + PP G P+ P G P G P+ P G P
Sbjct: 120 PEGPPPQGGNQSQGPPPR-PGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPP 178
Query: 96 ISGSPQNPTLSGNGALSPPRAISGSPQNP 124
G P+ P G P G P+ P
Sbjct: 179 HPGKPEGPPPQGGNQSQGPPPRPGKPEGP 207
Score = 40.4 bits (93), Expect = 0.002
Identities = 24/89 (26%), Positives = 29/89 (32%), Gaps = 1/89 (1%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRA 95
P G P N + PP G P+ P G P G P+ P G P
Sbjct: 141 PEGPPPQGGNQSQGPPPR-PGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPP 199
Query: 96 ISGSPQNPTLSGNGALSPPRAISGSPQNP 124
G P+ P G P G P+ P
Sbjct: 200 RPGKPEGPPPQGGNQSQGPPPRPGKPEGP 228
Score = 38.9 bits (89), Expect = 0.005
Identities = 24/89 (26%), Positives = 29/89 (32%), Gaps = 1/89 (1%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRA 95
P G P N + PP P GN + PP G P+ P G P
Sbjct: 78 PEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPR-PGKPEGPPPQGGNQSQGPPP 136
Query: 96 ISGSPQNPTLSGNGALSPPRAISGSPQNP 124
G P+ P G P G P+ P
Sbjct: 137 RPGKPEGPPPQGGNQSQGPPPRPGKPEGP 165
Score = 38.9 bits (89), Expect = 0.005
Identities = 33/99 (33%), Positives = 37/99 (37%), Gaps = 9/99 (9%)
Query: 31 GVSDHPG---GAPALSDNGALSPPRAISGSPQNPT-LSGNGALSPPRAISGSPQNPTLSG 86
G HPG G P N + PP G P+ P GN + PP G P+ P G
Sbjct: 175 GPPPHPGKPEGPPPQGGNQSQGPPPR-PGKPEGPPPQGGNQSQGPPPR-PGKPEGPPSQG 232
Query: 87 NGALSPPRAISGSPQN-PTLSGNGALSPPRAISGSPQNP 124
P G PQ P GN PP G PQ P
Sbjct: 233 GNKPQGPPPHPGKPQGPPPQEGNKPQRPPP--PGRPQGP 269
Score = 37.0 bits (84), Expect = 0.020
Identities = 26/90 (28%), Positives = 32/90 (35%), Gaps = 3/90 (3%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPT-LSGNGALSPPRAISGSPQNPTLSGNGALSPPR 94
P G P N + PP G P+ P GN + PP P GN + PP
Sbjct: 57 PEGRPPQGGNQSQGPPPR-PGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPP 115
Query: 95 AISGSPQNPTLSGNGALSPPRAISGSPQNP 124
G P+ P G P G P+ P
Sbjct: 116 R-PGKPEGPPPQGGNQSQGPPPRPGKPEGP 144
Score = 32.0 bits (71), Expect = 0.64
Identities = 24/75 (32%), Positives = 26/75 (34%), Gaps = 12/75 (16%)
Query: 50 PPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNG 109
PP PQ P PP PQ P G PP G+PQ P
Sbjct: 228 PPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPP--GGNPQQP------ 279
Query: 110 ALSPPRAISGSPQNP 124
L PP +G PQ P
Sbjct: 280 -LPPP---AGKPQGP 290
Score = 31.2 bits (69), Expect = 1.1
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 56 GSPQN-PTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQ-NPTLSGNGALSP 113
G P+ P GN + PP G P+ P G P G P+ P GN + P
Sbjct: 55 GKPEGRPPQGGNQSQGPPPR-PGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGP 113
Query: 114 PRAISGSPQNP 124
P G P+ P
Sbjct: 114 PPR-PGKPEGP 123
Score = 29.3 bits (64), Expect = 4.1
Identities = 29/102 (28%), Positives = 32/102 (31%), Gaps = 24/102 (23%)
Query: 26 PGSLDGVSDHPGG---APALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNP 82
PG +G G P PP PQ P G PP G+PQ P
Sbjct: 222 PGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPP--GGNPQQP 279
Query: 83 TLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNP 124
L PP +G PQ P PP G P P
Sbjct: 280 -------LPPP---AGKPQGP---------PPPPQGGRPHRP 302
Score = 28.9 bits (63), Expect = 5.4
Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 2/73 (2%)
Query: 51 PRAISGSPQNPTLSGNGALSPPRAISGSPQ-NPTLSGNGALSPPRAISGSPQNPTLSGNG 109
P ISG P+ G G P+ P GN + PP G P+ P G
Sbjct: 29 PSVISGKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPR-PGKPEGPPPQGGN 87
Query: 110 ALSPPRAISGSPQ 122
P G P+
Sbjct: 88 QSQGPPPRPGKPE 100
>gi|60279697 keratin associated protein 5-7 [Homo sapiens]
Length = 165
Score = 40.8 bits (94), Expect = 0.001
Identities = 35/114 (30%), Positives = 38/114 (33%), Gaps = 10/114 (8%)
Query: 139 GAGEGAVDTCFMTGCAEAVTVPSPAEDSAVTGCAGAVTRCLPRRRTVRGPACGDRLCGSC 198
G EG C GC + C V C P V PAC CGSC
Sbjct: 5 GCSEGCGSGC--GGCGSGCGGCGSGCGGCGSSCCVPVCCCKPVCCCV--PACSCSSCGSC 60
Query: 199 DGAFPGGGQCGDRL--CRSCDSPFPGGGWCGDRLCGSCDTV-PSPAGDGAVTGC 249
G+ G G CG C SC G G CG C C P G + C
Sbjct: 61 GGSKGGCGSCGGSKGGCGSCGGSKGGCGSCG---CSQCSCYKPCCCSSGCGSSC 111
>gi|123702038 keratin associated protein 5-9 [Homo sapiens]
Length = 169
Score = 40.0 bits (92), Expect = 0.002
Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 171 CAGAVTRCLPRRRTVRGPACGDRLCGSCDGAFPGGGQCGDRLCRSCDSPFPGGGWCGDRL 230
C V C+P +CG R CGSC G+ G G CG C SC P CG
Sbjct: 41 CCKPVCCCVP---ACSCSSCGKRGCGSCGGSKGGCGSCGCSQC-SCCKPCCCSSGCGSSC 96
Query: 231 C 231
C
Sbjct: 97 C 97
Score = 34.3 bits (77), Expect = 0.13
Identities = 27/91 (29%), Positives = 30/91 (32%), Gaps = 21/91 (23%)
Query: 170 GCAGAVTRCLPRRRTVRGPACG--DRLCGSCDGAFPGGGQCGDRLCRS--------CDSP 219
GC G C G +CG D CGSC G CG C C P
Sbjct: 2 GCCGCSGGC--------GSSCGGCDSSCGSCGSGCRG---CGPSCCAPVYCCKPVCCCVP 50
Query: 220 FPGGGWCGDRLCGSCDTVPSPAGDGAVTGCA 250
CG R CGSC G + C+
Sbjct: 51 ACSCSSCGKRGCGSCGGSKGGCGSCGCSQCS 81
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 40.0 bits (92), Expect = 0.002
Identities = 33/95 (34%), Positives = 35/95 (36%), Gaps = 12/95 (12%)
Query: 31 GVSDHPG---GAPALSDN---GALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTL 84
G HPG G P N A SPP G PQ GN PP G PQ P
Sbjct: 154 GPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQ---EGNKPQGPPPP--GKPQGPPP 208
Query: 85 SGNGALSPPRAISGSPQNPTLSGNGALSPPRAISG 119
+G P +G PQ P G PPR G
Sbjct: 209 AGGNPQQPQAPPAGKPQGPPPPPQGG-RPPRPAQG 242
Score = 37.0 bits (84), Expect = 0.020
Identities = 27/90 (30%), Positives = 32/90 (35%), Gaps = 4/90 (4%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLS-GNGALSPPR 94
P P N + PP G P+ P R+ G PQ P GN PP
Sbjct: 141 PERPPPQGGNQSQGPPPH-PGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPP 199
Query: 95 AISGSPQNPTLSGNGALSPPRAISGSPQNP 124
G PQ P +G P +G PQ P
Sbjct: 200 P--GKPQGPPPAGGNPQQPQAPPAGKPQGP 227
Score = 35.0 bits (79), Expect = 0.076
Identities = 23/89 (25%), Positives = 28/89 (31%), Gaps = 1/89 (1%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRA 95
P G P N + PP P GN + PP G P+ P G
Sbjct: 57 PQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPP-PHPGKPERPPPQGGNQSQGTPP 115
Query: 96 ISGSPQNPTLSGNGALSPPRAISGSPQNP 124
G P+ P G P G P+ P
Sbjct: 116 PPGKPERPPPQGGNQSHRPPPPPGKPERP 144
Score = 34.3 bits (77), Expect = 0.13
Identities = 25/90 (27%), Positives = 31/90 (34%), Gaps = 3/90 (3%)
Query: 36 PGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRA 95
P G P N + PP G P+ P G G P+ P G P
Sbjct: 78 PEGRPPQGGNQSQGPPPH-PGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPP 136
Query: 96 ISGSPQNPT-LSGNGALSPPRAISGSPQNP 124
G P+ P GN + PP G P+ P
Sbjct: 137 PPGKPERPPPQGGNQSQGPP-PHPGKPEGP 165
Score = 34.3 bits (77), Expect = 0.13
Identities = 23/94 (24%), Positives = 28/94 (29%), Gaps = 4/94 (4%)
Query: 31 GVSDHPGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGAL 90
G + P G PP G P+ P G P G P+ P G
Sbjct: 97 GKPERPPPQGGNQSQGTPPPP----GKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQS 152
Query: 91 SPPRAISGSPQNPTLSGNGALSPPRAISGSPQNP 124
P G P+ P R+ G PQ P
Sbjct: 153 QGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGP 186
Score = 33.9 bits (76), Expect = 0.17
Identities = 28/98 (28%), Positives = 33/98 (33%), Gaps = 3/98 (3%)
Query: 28 SLDGVSDHPGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQ-NPTLSG 86
SL +S P G N PP G PQ P G P G P+ P G
Sbjct: 28 SLFLISGKPEGRRPQGGNQPQRPPPP-PGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGG 86
Query: 87 NGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNP 124
N + PP G P+ P G G P+ P
Sbjct: 87 NQSQGPP-PHPGKPERPPPQGGNQSQGTPPPPGKPERP 123
>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo
sapiens]
Length = 1650
Score = 39.7 bits (91), Expect = 0.003
Identities = 63/253 (24%), Positives = 84/253 (33%), Gaps = 23/253 (9%)
Query: 24 GIPGSLDGVSDHPGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPT 83
G PG G PG A G PP G+P +G R + G+ P
Sbjct: 860 GPPGP-PGEQGLPGTAGKEGTKGDPGPP----GAPGKDGPAGLRGFPGERGLPGTAGGPG 914
Query: 84 LSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSVCTRYITGAVVGAGEG 143
L GN S P +GSP +G+G P G PQ P + + + G +G
Sbjct: 915 LKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPG-PQGPPGAAGEKGVPGE-----KG 968
Query: 144 AVDTCFMTGCAEAVTVPSPAEDSAVTGCAGAVTRC-LPRRRTVRGPACGDRLCGSCDGAF 202
+ G V +P PA V G G P ++ +G G
Sbjct: 969 PIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIG 1028
Query: 203 PGG-----GQCGDRLCRSCDSPFPGGGWCGDRLCG------SCDTVPSPAGDGAVTGCAG 251
P G G G+ R F G G R +P P+G+ TG G
Sbjct: 1029 PVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVG 1088
Query: 252 AVTVPSPVGDSAP 264
+ P P G P
Sbjct: 1089 PMGPPGPPGPRGP 1101
Score = 30.8 bits (68), Expect = 1.4
Identities = 28/100 (28%), Positives = 33/100 (33%), Gaps = 3/100 (3%)
Query: 24 GIPG--SLDGVSDHPGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQN 81
GIPG + G+ G +L G PP G+P L G P G
Sbjct: 533 GIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQ-QGTPGTQGLPGPQGAIGPHGEKGPQGK 591
Query: 82 PTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSP 121
P L G P G P GN S P+ G P
Sbjct: 592 PGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYP 631
Score = 28.5 bits (62), Expect = 7.1
Identities = 37/137 (27%), Positives = 53/137 (38%), Gaps = 25/137 (18%)
Query: 6 QKAHFQKSKPDRRLQLRIGIPGSLDGVSDHPG-----GAPALS-DNGALSP-----PRAI 54
Q+A Q RL LR G PG + G + PG G+P L ++G L P P+ +
Sbjct: 384 QEAQAQAILQQARLALR-GPPGPM-GYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGL 441
Query: 55 SGSPQNPTLSG----NGALSPP--------RAISGSPQNPTLSGNGALSPPRAISGSPQN 102
+G P G +GA P R G P P G+ + + + G P
Sbjct: 442 TGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGE 501
Query: 103 PTLSGNGALSPPRAISG 119
G+ PR + G
Sbjct: 502 DGERGDDGEIGPRGLPG 518
>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein [Homo
sapiens]
Length = 1629
Score = 39.7 bits (91), Expect = 0.003
Identities = 63/253 (24%), Positives = 84/253 (33%), Gaps = 23/253 (9%)
Query: 24 GIPGSLDGVSDHPGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPT 83
G PG G PG A G PP G+P +G R + G+ P
Sbjct: 839 GPPGP-PGEQGLPGTAGKEGTKGDPGPP----GAPGKDGPAGLRGFPGERGLPGTAGGPG 893
Query: 84 LSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSVCTRYITGAVVGAGEG 143
L GN S P +GSP +G+G P G PQ P + + + G +G
Sbjct: 894 LKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPG-PQGPPGAAGEKGVPGE-----KG 947
Query: 144 AVDTCFMTGCAEAVTVPSPAEDSAVTGCAGAVTRC-LPRRRTVRGPACGDRLCGSCDGAF 202
+ G V +P PA V G G P ++ +G G
Sbjct: 948 PIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIG 1007
Query: 203 PGG-----GQCGDRLCRSCDSPFPGGGWCGDRLCG------SCDTVPSPAGDGAVTGCAG 251
P G G G+ R F G G R +P P+G+ TG G
Sbjct: 1008 PVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVG 1067
Query: 252 AVTVPSPVGDSAP 264
+ P P G P
Sbjct: 1068 PMGPPGPPGPRGP 1080
Score = 30.8 bits (68), Expect = 1.4
Identities = 28/100 (28%), Positives = 33/100 (33%), Gaps = 3/100 (3%)
Query: 24 GIPG--SLDGVSDHPGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQN 81
GIPG + G+ G +L G PP G+P L G P G
Sbjct: 512 GIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQ-QGTPGTQGLPGPQGAIGPHGEKGPQGK 570
Query: 82 PTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSP 121
P L G P G P GN S P+ G P
Sbjct: 571 PGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYP 610
Score = 28.5 bits (62), Expect = 7.1
Identities = 37/137 (27%), Positives = 53/137 (38%), Gaps = 25/137 (18%)
Query: 6 QKAHFQKSKPDRRLQLRIGIPGSLDGVSDHPG-----GAPALS-DNGALSP-----PRAI 54
Q+A Q RL LR G PG + G + PG G+P L ++G L P P+ +
Sbjct: 363 QEAQAQAILQQARLALR-GPPGPM-GYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGL 420
Query: 55 SGSPQNPTLSG----NGALSPP--------RAISGSPQNPTLSGNGALSPPRAISGSPQN 102
+G P G +GA P R G P P G+ + + + G P
Sbjct: 421 TGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGE 480
Query: 103 PTLSGNGALSPPRAISG 119
G+ PR + G
Sbjct: 481 DGERGDDGEIGPRGLPG 497
>gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein [Homo
sapiens]
Length = 1736
Score = 39.7 bits (91), Expect = 0.003
Identities = 63/253 (24%), Positives = 84/253 (33%), Gaps = 23/253 (9%)
Query: 24 GIPGSLDGVSDHPGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPT 83
G PG G PG A G PP G+P +G R + G+ P
Sbjct: 946 GPPGP-PGEQGLPGTAGKEGTKGDPGPP----GAPGKDGPAGLRGFPGERGLPGTAGGPG 1000
Query: 84 LSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSVCTRYITGAVVGAGEG 143
L GN S P +GSP +G+G P G PQ P + + + G +G
Sbjct: 1001 LKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPG-PQGPPGAAGEKGVPGE-----KG 1054
Query: 144 AVDTCFMTGCAEAVTVPSPAEDSAVTGCAGAVTRC-LPRRRTVRGPACGDRLCGSCDGAF 202
+ G V +P PA V G G P ++ +G G
Sbjct: 1055 PIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIG 1114
Query: 203 PGG-----GQCGDRLCRSCDSPFPGGGWCGDRLCG------SCDTVPSPAGDGAVTGCAG 251
P G G G+ R F G G R +P P+G+ TG G
Sbjct: 1115 PVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVG 1174
Query: 252 AVTVPSPVGDSAP 264
+ P P G P
Sbjct: 1175 PMGPPGPPGPRGP 1187
Score = 30.8 bits (68), Expect = 1.4
Identities = 28/100 (28%), Positives = 33/100 (33%), Gaps = 3/100 (3%)
Query: 24 GIPG--SLDGVSDHPGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQN 81
GIPG + G+ G +L G PP G+P L G P G
Sbjct: 619 GIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQ-QGTPGTQGLPGPQGAIGPHGEKGPQGK 677
Query: 82 PTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSP 121
P L G P G P GN S P+ G P
Sbjct: 678 PGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYP 717
Score = 28.5 bits (62), Expect = 7.1
Identities = 37/137 (27%), Positives = 53/137 (38%), Gaps = 25/137 (18%)
Query: 6 QKAHFQKSKPDRRLQLRIGIPGSLDGVSDHPG-----GAPALS-DNGALSP-----PRAI 54
Q+A Q RL LR G PG + G + PG G+P L ++G L P P+ +
Sbjct: 470 QEAQAQAILQQARLALR-GPPGPM-GYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGL 527
Query: 55 SGSPQNPTLSG----NGALSPP--------RAISGSPQNPTLSGNGALSPPRAISGSPQN 102
+G P G +GA P R G P P G+ + + + G P
Sbjct: 528 TGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGE 587
Query: 103 PTLSGNGALSPPRAISG 119
G+ PR + G
Sbjct: 588 DGERGDDGEIGPRGLPG 604
>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
sapiens]
Length = 1685
Score = 39.7 bits (91), Expect = 0.003
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 17/99 (17%)
Query: 22 RIGIPGSLDGVSDHPGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQN 81
R G+PG P G P L NG + + G P P L G P + G+P
Sbjct: 1262 RPGLPG--------PEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGR 1313
Query: 82 PTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGS 120
P L+G + G P P + G + P + GS
Sbjct: 1314 PGLNG---------MKGDPGLPGVPGFPGMKGPSGVPGS 1343
Score = 39.3 bits (90), Expect = 0.004
Identities = 33/112 (29%), Positives = 42/112 (37%), Gaps = 12/112 (10%)
Query: 27 GSLDGVSDHPG-----GAPALSDNGALSPPRAISGSPQNPTLSGN----GALSPPR--AI 75
G L G+ +PG G P + P GSP P L G G PP +
Sbjct: 1207 GGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSP-GPALEGPKGNPGPQGPPGRPGL 1265
Query: 76 SGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLS 127
G P L GNG + + G P P L G P + G+P P L+
Sbjct: 1266 PGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLN 1317
Score = 36.6 bits (83), Expect = 0.026
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 11/107 (10%)
Query: 22 RIGIPGSL--DGVSDHPGGAPALSDNGALSPPRAISG--SPQNPTLSGNGALSPPRAISG 77
R G+PG DG+ PG + G+ P + G P +P L G+ + G
Sbjct: 915 RSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEP-GLPGPPGPMDPNLLGS------KGEKG 967
Query: 78 SPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNP 124
P P + G + + G P P LSG L P G+P P
Sbjct: 968 EPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLP 1014
Score = 36.6 bits (83), Expect = 0.026
Identities = 34/111 (30%), Positives = 42/111 (37%), Gaps = 8/111 (7%)
Query: 14 KPDRRLQLRIGIPGSLD--GVSDHPG--GAPALSDNGALSPPRAISGSPQNPTLSGNGAL 69
K D LQ + G+PG G PG G P D L + G P P + G
Sbjct: 922 KGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGS-KGEKGEPGLPGIPGVSGP 980
Query: 70 SPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGS 120
+ + G P P LSG L P G NP L G L P + G+
Sbjct: 981 KGYQGLPGDPGQPGLSGQPGLPGP---PGPKGNPGLPGQPGLIGPPGLKGT 1028
Score = 35.8 bits (81), Expect = 0.044
Identities = 66/266 (24%), Positives = 80/266 (30%), Gaps = 55/266 (20%)
Query: 23 IGIPGSLDGVSDHPG--GAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPR--AISGS 78
+G PG GV PG G P + L + G P ++ G P + G
Sbjct: 1032 MGFPGP-QGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGY 1090
Query: 79 PQNPTLSGN-------GALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSVCTR 131
P NP + G+ G P A G P P G P+ ISG P NP L
Sbjct: 1091 PGNPGIKGSVGDPGLPGLPGTPGA-KGQPGLPGFPGTPGPPGPKGISGPPGNPGLP---- 1145
Query: 132 YITGAVVGAGE-GAVDTCFMTGCAEAVTVPSPAEDSAVTGCAGAVTRCLPRRRTVRGPAC 190
G V G G G G +P PA G G P + G
Sbjct: 1146 GEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQ-- 1203
Query: 191 GDRLCGSCDGAFPGGGQCGDRLCRSCDSPFPGGGWCGDRLCGSCDTVPSPAGDGAVTGCA 250
DG PG PG +P P G+ G
Sbjct: 1204 ------KGDGGLPG---------------IPGN-----------PGLPGPKGEPGFHGFP 1231
Query: 251 GAVTVPSPVGDSAPRL---RWQPAPQ 273
G P P G P L + P PQ
Sbjct: 1232 GVQGPPGPPGSPGPALEGPKGNPGPQ 1257
Score = 35.0 bits (79), Expect = 0.076
Identities = 32/107 (29%), Positives = 40/107 (37%), Gaps = 9/107 (8%)
Query: 24 GIPGSLDGV---SDHPGGAPALSDNGALSPPRA---ISGSPQNPTLSGNGALSPPRAISG 77
G PG +D S G P L +S P+ + G P P LSG L P G
Sbjct: 950 GPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKG 1009
Query: 78 SPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNP 124
NP L G L P + G+ + G + P SG P P
Sbjct: 1010 ---NPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQP 1053
Score = 34.3 bits (77), Expect = 0.13
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Query: 24 GIPGSLDGVSDHPGG-APALSDNGALSPPRAISGSP------QNPTLSGNGALSPPRAIS 76
G PG + G PG PAL P+ G P P L GNG + +
Sbjct: 1229 GFPG-VQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGLPGPEGPPGLPGNGGIKGEKGNP 1287
Query: 77 GSPQNPTLSGNGALSPPRAISGSPQNPTLSG 107
G P P L G P + G+P P L+G
Sbjct: 1288 GQPGLPGLPGLKGDQGPPGLQGNPGRPGLNG 1318
Score = 33.9 bits (76), Expect = 0.17
Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Query: 24 GIPGSLDGVSDHPGGAPALSDNGALSPP--RAISGSPQNPTLSGNGALSPPRAISGSPQN 81
G+PG G PG D+G PP + I G P P G L G+P
Sbjct: 60 GLPG-FPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGP 118
Query: 82 PTLSGNGALSPPRAISGSPQNPTLSG 107
+ G R GSP P L G
Sbjct: 119 QGIPGCNGTKGERGFPGSPGFPGLQG 144
Score = 30.8 bits (68), Expect = 1.4
Identities = 31/102 (30%), Positives = 37/102 (36%), Gaps = 10/102 (9%)
Query: 24 GIPG--SLDGVSDHPG--GAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSP 79
GIPG G PG G P LS L P G NP L G L P + G+
Sbjct: 973 GIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKG---NPGLPGQPGLIGPPGLKGTI 1029
Query: 80 QNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSP 121
+ G + P SG P P G+ L + G P
Sbjct: 1030 GDMGFPGPQGVEGPPGPSGVPGQP---GSPGLPGQKGDKGDP 1068
Score = 30.4 bits (67), Expect = 1.9
Identities = 34/115 (29%), Positives = 40/115 (34%), Gaps = 13/115 (11%)
Query: 24 GIPGSLDGVSDHPGGAPALS----DNGALSPP--RAISGSPQNPTLSGNGALSPPRAISG 77
G PG + P G P LS D G P + G P G + P G
Sbjct: 1182 GEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPG 1241
Query: 78 SPQNPTLSG----NGALSPP--RAISGSPQNPTLSGNGALSPPRAISGSPQNPTL 126
SP P L G G PP + G P L GNG + + G P P L
Sbjct: 1242 SP-GPALEGPKGNPGPQGPPGRPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGL 1295
Score = 30.0 bits (66), Expect = 2.4
Identities = 31/94 (32%), Positives = 35/94 (37%), Gaps = 12/94 (12%)
Query: 24 GIPGSLDGVSDHPGGAPALSDNGALSPPRA--ISGSPQNPTLSGNGALSPPRAISGSPQN 81
G PGS D D G L P A + G P P G L P+ G P
Sbjct: 539 GFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPK---GEPGG 595
Query: 82 PTLSGNGALSPPRAISGSPQNPTLSGN-GALSPP 114
T G PP G+P P L GN G + PP
Sbjct: 596 ITFKGERG--PP----GNPGLPGLPGNIGPMGPP 623
Score = 28.1 bits (61), Expect = 9.2
Identities = 26/96 (27%), Positives = 30/96 (31%), Gaps = 7/96 (7%)
Query: 31 GVSDHPGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGAL 90
G+ HPG P PR G P G P+ I G P P G L
Sbjct: 54 GLEGHPG-LPGFPGPEGPPGPRGQKGDDGIPGPPG------PKGIRGPPGLPGFPGTPGL 106
Query: 91 SPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTL 126
G+P + G R GSP P L
Sbjct: 107 PGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGL 142
Score = 28.1 bits (61), Expect = 9.2
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 13/92 (14%)
Query: 24 GIPGSLDGVSDHPGGAPALSDNGALSPP--RAISGSPQNPTLSGNGALSPPRAIS----- 76
G+PG++ P G P G + + ++G+P P + G P + I+
Sbjct: 612 GLPGNIG-----PMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKG-DPGQTITQPGKP 665
Query: 77 GSPQNPTLSGNGALSPPRAISGSPQNPTLSGN 108
G P NP G+ L + G P P + G+
Sbjct: 666 GLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGS 697
>gi|13994372 keratin associated protein 17-1 [Homo sapiens]
Length = 105
Score = 39.7 bits (91), Expect = 0.003
Identities = 29/79 (36%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 187 GPACGDRLCGS--CDGAFPGGGQCGDRLCRSCDSPFPGGGWCGDRLCGSCDTVPSPAGDG 244
G CG CG C G+ GG CG C S G G CG CGS S G
Sbjct: 33 GSCCG---CGGSGCGGSGCGGSCCGSSCCGSGCGGCGGCGGCGGGCCGSSCCGSSCCG-- 87
Query: 245 AVTGCAGAVTV-PSPVGDS 262
+GC G V P+P+ D+
Sbjct: 88 --SGCCGPVCCQPTPICDT 104
>gi|123173777 keratin associated protein 5-8 [Homo sapiens]
Length = 187
Score = 39.7 bits (91), Expect = 0.003
Identities = 24/65 (36%), Positives = 26/65 (40%), Gaps = 6/65 (9%)
Query: 188 PACGDRLCGSCDGAFPGGGQCGDRL--CRSCDSPFPGGGWCGDRLCGSCDTV-PSPAGDG 244
PAC CGSC G+ G G CG C SC G G CG C C P G
Sbjct: 43 PACSCSSCGSCGGSKGGRGSCGGSKGDCGSCGGSKGGCGSCG---CSQCSCYKPCCCSSG 99
Query: 245 AVTGC 249
+ C
Sbjct: 100 CGSSC 104
>gi|8567388 period 3 [Homo sapiens]
Length = 1201
Score = 39.3 bits (90), Expect = 0.004
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 32 VSDHPGGAPALSDNGALS---PPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNG 88
V+ + G + + GALS PPR +P +PT S SPP +P +PT S
Sbjct: 956 VTGNNGSESSPATTGALSTGSPPRE---NPSHPTASALSTGSPPMK---NPSHPTASALS 1009
Query: 89 ALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSV 128
SPP +P +PT S PP S +P +PT +V
Sbjct: 1010 TGSPPMK---NPSHPTASTLSMGLPP---SRTPSHPTATV 1043
Score = 35.0 bits (79), Expect = 0.076
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 55 SGSPQNPTLSGNGAL-SPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSP 113
+GS +P +G + SPPR +P +PT S SPP +P +PT S SP
Sbjct: 960 NGSESSPATTGALSTGSPPRE---NPSHPTASALSTGSPPMK---NPSHPTASALSTGSP 1013
Query: 114 PRAISGSPQNPTLSV------CTRYITGAVVGAGEGAVDTCFMTGCA 154
P P TLS+ + T V+ G ++ TG A
Sbjct: 1014 PMKNPSHPTASTLSMGLPPSRTPSHPTATVLSTGSPPSESPSRTGSA 1060
>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
sapiens]
Length = 1691
Score = 39.3 bits (90), Expect = 0.004
Identities = 35/113 (30%), Positives = 43/113 (38%), Gaps = 9/113 (7%)
Query: 24 GIPGS--LDGVSDHPG--GAPALSDNGAL--SPPRAISGSPQNPTLSGNGALSPPRAISG 77
GIPG+ L G PG G P + SP A+ G NP G P G
Sbjct: 1211 GIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGPTGFQG 1270
Query: 78 SPQN---PTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLS 127
P P L GNG + + G P P L G P + G+P P L+
Sbjct: 1271 LPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLN 1323
Score = 38.9 bits (89), Expect = 0.005
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 17/97 (17%)
Query: 24 GIPGSLDGVSDHPGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPT 83
G+PG P G P L NG + + G P P L G P + G+P P
Sbjct: 1270 GLPG--------PEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPG 1321
Query: 84 LSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGS 120
L+G + G P P + G + P + GS
Sbjct: 1322 LNG---------MKGDPGLPGVPGFPGMKGPSGVPGS 1349
Score = 36.6 bits (83), Expect = 0.026
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 11/107 (10%)
Query: 22 RIGIPGSL--DGVSDHPGGAPALSDNGALSPPRAISG--SPQNPTLSGNGALSPPRAISG 77
R G+PG DG+ PG + G+ P + G P +P L G+ + G
Sbjct: 915 RSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEP-GLPGPPGPMDPNLLGS------KGEKG 967
Query: 78 SPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNP 124
P P + G + + G P P LSG L P G+P P
Sbjct: 968 EPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLP 1014
Score = 36.6 bits (83), Expect = 0.026
Identities = 34/111 (30%), Positives = 42/111 (37%), Gaps = 8/111 (7%)
Query: 14 KPDRRLQLRIGIPGSLD--GVSDHPG--GAPALSDNGALSPPRAISGSPQNPTLSGNGAL 69
K D LQ + G+PG G PG G P D L + G P P + G
Sbjct: 922 KGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGS-KGEKGEPGLPGIPGVSGP 980
Query: 70 SPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGS 120
+ + G P P LSG L P G NP L G L P + G+
Sbjct: 981 KGYQGLPGDPGQPGLSGQPGLPGP---PGPKGNPGLPGQPGLIGPPGLKGT 1028
Score = 36.6 bits (83), Expect = 0.026
Identities = 26/87 (29%), Positives = 32/87 (36%), Gaps = 3/87 (3%)
Query: 24 GIPGSLDGVSDHPGGAPALSDNGALSPPRAISGSPQN---PTLSGNGALSPPRAISGSPQ 80
G PGS + P G P P G P P L GNG + + G P
Sbjct: 1238 GPPGSPGPALEGPKGNPGPQGPPGRPGPTGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPG 1297
Query: 81 NPTLSGNGALSPPRAISGSPQNPTLSG 107
P L G P + G+P P L+G
Sbjct: 1298 LPGLPGLKGDQGPPGLQGNPGRPGLNG 1324
Score = 35.8 bits (81), Expect = 0.044
Identities = 66/266 (24%), Positives = 80/266 (30%), Gaps = 55/266 (20%)
Query: 23 IGIPGSLDGVSDHPG--GAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPR--AISGS 78
+G PG GV PG G P + L + G P ++ G P + G
Sbjct: 1032 MGFPGP-QGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGY 1090
Query: 79 PQNPTLSGN-------GALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSVCTR 131
P NP + G+ G P A G P P G P+ ISG P NP L
Sbjct: 1091 PGNPGIKGSVGDPGLPGLPGTPGA-KGQPGLPGFPGTPGPPGPKGISGPPGNPGLP---- 1145
Query: 132 YITGAVVGAGE-GAVDTCFMTGCAEAVTVPSPAEDSAVTGCAGAVTRCLPRRRTVRGPAC 190
G V G G G G +P PA G G P + G
Sbjct: 1146 GEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQ-- 1203
Query: 191 GDRLCGSCDGAFPGGGQCGDRLCRSCDSPFPGGGWCGDRLCGSCDTVPSPAGDGAVTGCA 250
DG PG PG +P P G+ G
Sbjct: 1204 ------KGDGGLPG---------------IPGN-----------PGLPGPKGEPGFHGFP 1231
Query: 251 GAVTVPSPVGDSAPRL---RWQPAPQ 273
G P P G P L + P PQ
Sbjct: 1232 GVQGPPGPPGSPGPALEGPKGNPGPQ 1257
Score = 35.0 bits (79), Expect = 0.076
Identities = 32/107 (29%), Positives = 40/107 (37%), Gaps = 9/107 (8%)
Query: 24 GIPGSLDGV---SDHPGGAPALSDNGALSPPRA---ISGSPQNPTLSGNGALSPPRAISG 77
G PG +D S G P L +S P+ + G P P LSG L P G
Sbjct: 950 GPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKG 1009
Query: 78 SPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNP 124
NP L G L P + G+ + G + P SG P P
Sbjct: 1010 ---NPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQP 1053
Score = 33.9 bits (76), Expect = 0.17
Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Query: 24 GIPGSLDGVSDHPGGAPALSDNGALSPP--RAISGSPQNPTLSGNGALSPPRAISGSPQN 81
G+PG G PG D+G PP + I G P P G L G+P
Sbjct: 60 GLPG-FPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGP 118
Query: 82 PTLSGNGALSPPRAISGSPQNPTLSG 107
+ G R GSP P L G
Sbjct: 119 QGIPGCNGTKGERGFPGSPGFPGLQG 144
Score = 30.8 bits (68), Expect = 1.4
Identities = 31/102 (30%), Positives = 37/102 (36%), Gaps = 10/102 (9%)
Query: 24 GIPG--SLDGVSDHPG--GAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSP 79
GIPG G PG G P LS L P G NP L G L P + G+
Sbjct: 973 GIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKG---NPGLPGQPGLIGPPGLKGTI 1029
Query: 80 QNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSP 121
+ G + P SG P P G+ L + G P
Sbjct: 1030 GDMGFPGPQGVEGPPGPSGVPGQP---GSPGLPGQKGDKGDP 1068
Score = 30.4 bits (67), Expect = 1.9
Identities = 32/120 (26%), Positives = 37/120 (30%), Gaps = 17/120 (14%)
Query: 24 GIPGSLDGVSDHPGGAPALSDNGALSPPRAISGSPQNPTLSGNGAL-------------- 69
G PG + P G P LS I G+P P G
Sbjct: 1182 GEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPG 1241
Query: 70 SPPRAISGSPQNPTLSGNGALSPPRAISGSP---QNPTLSGNGALSPPRAISGSPQNPTL 126
SP A+ G NP G P G P P L GNG + + G P P L
Sbjct: 1242 SPGPALEGPKGNPGPQGPPGRPGPTGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGL 1301
Score = 30.0 bits (66), Expect = 2.4
Identities = 31/94 (32%), Positives = 35/94 (37%), Gaps = 12/94 (12%)
Query: 24 GIPGSLDGVSDHPGGAPALSDNGALSPPRA--ISGSPQNPTLSGNGALSPPRAISGSPQN 81
G PGS D D G L P A + G P P G L P+ G P
Sbjct: 539 GFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPK---GEPGG 595
Query: 82 PTLSGNGALSPPRAISGSPQNPTLSGN-GALSPP 114
T G PP G+P P L GN G + PP
Sbjct: 596 ITFKGERG--PP----GNPGLPGLPGNIGPMGPP 623
Score = 28.1 bits (61), Expect = 9.2
Identities = 26/96 (27%), Positives = 30/96 (31%), Gaps = 7/96 (7%)
Query: 31 GVSDHPGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGAL 90
G+ HPG P PR G P G P+ I G P P G L
Sbjct: 54 GLEGHPG-LPGFPGPEGPPGPRGQKGDDGIPGPPG------PKGIRGPPGLPGFPGTPGL 106
Query: 91 SPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTL 126
G+P + G R GSP P L
Sbjct: 107 PGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGL 142
Score = 28.1 bits (61), Expect = 9.2
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 13/92 (14%)
Query: 24 GIPGSLDGVSDHPGGAPALSDNGALSPP--RAISGSPQNPTLSGNGALSPPRAIS----- 76
G+PG++ P G P G + + ++G+P P + G P + I+
Sbjct: 612 GLPGNIG-----PMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKG-DPGQTITQPGKP 665
Query: 77 GSPQNPTLSGNGALSPPRAISGSPQNPTLSGN 108
G P NP G+ L + G P P + G+
Sbjct: 666 GLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGS 697
>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
sapiens]
Length = 1688
Score = 39.3 bits (90), Expect = 0.004
Identities = 33/115 (28%), Positives = 43/115 (37%), Gaps = 15/115 (13%)
Query: 27 GSLDGVSDHPG-----GAPALSDNGALSPPRAISGSPQNPTLSGN----GALSPP----- 72
G L G+ +PG G P + P GSP P L G G PP
Sbjct: 1207 GGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSP-GPALEGPKGNPGPQGPPGRPGF 1265
Query: 73 RAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLS 127
+ + G P L GNG + + G P P L G P + G+P P L+
Sbjct: 1266 QGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLN 1320
Score = 38.9 bits (89), Expect = 0.005
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 17/97 (17%)
Query: 24 GIPGSLDGVSDHPGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPT 83
G+PG P G P L NG + + G P P L G P + G+P P
Sbjct: 1267 GLPG--------PEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPG 1318
Query: 84 LSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGS 120
L+G + G P P + G + P + GS
Sbjct: 1319 LNG---------MKGDPGLPGVPGFPGMKGPSGVPGS 1346
Score = 37.0 bits (84), Expect = 0.020
Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 10/89 (11%)
Query: 24 GIPGSLDGVSDHPGGAPALSDNGALSPP-----RAISGSPQNPTLSGNGALSPPRAISGS 78
G PGS + P G P G PP + + G P L GNG + + G
Sbjct: 1238 GPPGSPGPALEGPKGNP-----GPQGPPGRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQ 1292
Query: 79 PQNPTLSGNGALSPPRAISGSPQNPTLSG 107
P P L G P + G+P P L+G
Sbjct: 1293 PGLPGLPGLKGDQGPPGLQGNPGRPGLNG 1321
Score = 36.6 bits (83), Expect = 0.026
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 11/107 (10%)
Query: 22 RIGIPGSL--DGVSDHPGGAPALSDNGALSPPRAISG--SPQNPTLSGNGALSPPRAISG 77
R G+PG DG+ PG + G+ P + G P +P L G+ + G
Sbjct: 915 RSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEP-GLPGPPGPMDPNLLGS------KGEKG 967
Query: 78 SPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNP 124
P P + G + + G P P LSG L P G+P P
Sbjct: 968 EPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLP 1014
Score = 36.6 bits (83), Expect = 0.026
Identities = 34/111 (30%), Positives = 42/111 (37%), Gaps = 8/111 (7%)
Query: 14 KPDRRLQLRIGIPGSLD--GVSDHPG--GAPALSDNGALSPPRAISGSPQNPTLSGNGAL 69
K D LQ + G+PG G PG G P D L + G P P + G
Sbjct: 922 KGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGS-KGEKGEPGLPGIPGVSGP 980
Query: 70 SPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGS 120
+ + G P P LSG L P G NP L G L P + G+
Sbjct: 981 KGYQGLPGDPGQPGLSGQPGLPGP---PGPKGNPGLPGQPGLIGPPGLKGT 1028
Score = 35.8 bits (81), Expect = 0.044
Identities = 66/266 (24%), Positives = 80/266 (30%), Gaps = 55/266 (20%)
Query: 23 IGIPGSLDGVSDHPG--GAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPR--AISGS 78
+G PG GV PG G P + L + G P ++ G P + G
Sbjct: 1032 MGFPGP-QGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGY 1090
Query: 79 PQNPTLSGN-------GALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSVCTR 131
P NP + G+ G P A G P P G P+ ISG P NP L
Sbjct: 1091 PGNPGIKGSVGDPGLPGLPGTPGA-KGQPGLPGFPGTPGPPGPKGISGPPGNPGLP---- 1145
Query: 132 YITGAVVGAGE-GAVDTCFMTGCAEAVTVPSPAEDSAVTGCAGAVTRCLPRRRTVRGPAC 190
G V G G G G +P PA G G P + G
Sbjct: 1146 GEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQ-- 1203
Query: 191 GDRLCGSCDGAFPGGGQCGDRLCRSCDSPFPGGGWCGDRLCGSCDTVPSPAGDGAVTGCA 250
DG PG PG +P P G+ G
Sbjct: 1204 ------KGDGGLPG---------------IPGN-----------PGLPGPKGEPGFHGFP 1231
Query: 251 GAVTVPSPVGDSAPRL---RWQPAPQ 273
G P P G P L + P PQ
Sbjct: 1232 GVQGPPGPPGSPGPALEGPKGNPGPQ 1257
Score = 35.0 bits (79), Expect = 0.076
Identities = 32/107 (29%), Positives = 40/107 (37%), Gaps = 9/107 (8%)
Query: 24 GIPGSLDGV---SDHPGGAPALSDNGALSPPRA---ISGSPQNPTLSGNGALSPPRAISG 77
G PG +D S G P L +S P+ + G P P LSG L P G
Sbjct: 950 GPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKG 1009
Query: 78 SPQNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNP 124
NP L G L P + G+ + G + P SG P P
Sbjct: 1010 ---NPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQP 1053
Score = 33.9 bits (76), Expect = 0.17
Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Query: 24 GIPGSLDGVSDHPGGAPALSDNGALSPP--RAISGSPQNPTLSGNGALSPPRAISGSPQN 81
G+PG G PG D+G PP + I G P P G L G+P
Sbjct: 60 GLPG-FPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGP 118
Query: 82 PTLSGNGALSPPRAISGSPQNPTLSG 107
+ G R GSP P L G
Sbjct: 119 QGIPGCNGTKGERGFPGSPGFPGLQG 144
Score = 30.8 bits (68), Expect = 1.4
Identities = 31/102 (30%), Positives = 37/102 (36%), Gaps = 10/102 (9%)
Query: 24 GIPG--SLDGVSDHPG--GAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSP 79
GIPG G PG G P LS L P G NP L G L P + G+
Sbjct: 973 GIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKG---NPGLPGQPGLIGPPGLKGTI 1029
Query: 80 QNPTLSGNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSP 121
+ G + P SG P P G+ L + G P
Sbjct: 1030 GDMGFPGPQGVEGPPGPSGVPGQP---GSPGLPGQKGDKGDP 1068
Score = 30.4 bits (67), Expect = 1.9
Identities = 34/118 (28%), Positives = 41/118 (34%), Gaps = 16/118 (13%)
Query: 24 GIPGSLDGVSDHPGGAPALS----DNGALSPP--RAISGSPQNPTLSGNGALSPPRAISG 77
G PG + P G P LS D G P + G P G + P G
Sbjct: 1182 GEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPG 1241
Query: 78 SPQNPTLSG----NGALSPP-----RAISGSPQNPTLSGNGALSPPRAISGSPQNPTL 126
SP P L G G PP + + G P L GNG + + G P P L
Sbjct: 1242 SP-GPALEGPKGNPGPQGPPGRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGL 1298
Score = 30.0 bits (66), Expect = 2.4
Identities = 31/94 (32%), Positives = 35/94 (37%), Gaps = 12/94 (12%)
Query: 24 GIPGSLDGVSDHPGGAPALSDNGALSPPRA--ISGSPQNPTLSGNGALSPPRAISGSPQN 81
G PGS D D G L P A + G P P G L P+ G P
Sbjct: 539 GFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPK---GEPGG 595
Query: 82 PTLSGNGALSPPRAISGSPQNPTLSGN-GALSPP 114
T G PP G+P P L GN G + PP
Sbjct: 596 ITFKGERG--PP----GNPGLPGLPGNIGPMGPP 623
Score = 28.1 bits (61), Expect = 9.2
Identities = 26/96 (27%), Positives = 30/96 (31%), Gaps = 7/96 (7%)
Query: 31 GVSDHPGGAPALSDNGALSPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTLSGNGAL 90
G+ HPG P PR G P G P+ I G P P G L
Sbjct: 54 GLEGHPG-LPGFPGPEGPPGPRGQKGDDGIPGPPG------PKGIRGPPGLPGFPGTPGL 106
Query: 91 SPPRAISGSPQNPTLSGNGALSPPRAISGSPQNPTL 126
G+P + G R GSP P L
Sbjct: 107 PGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGL 142
Score = 28.1 bits (61), Expect = 9.2
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 13/92 (14%)
Query: 24 GIPGSLDGVSDHPGGAPALSDNGALSPP--RAISGSPQNPTLSGNGALSPPRAIS----- 76
G+PG++ P G P G + + ++G+P P + G P + I+
Sbjct: 612 GLPGNIG-----PMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKG-DPGQTITQPGKP 665
Query: 77 GSPQNPTLSGNGALSPPRAISGSPQNPTLSGN 108
G P NP G+ L + G P P + G+
Sbjct: 666 GLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGS 697
>gi|122891874 keratin associated protein 5-5 [Homo sapiens]
Length = 237
Score = 39.3 bits (90), Expect = 0.004
Identities = 32/90 (35%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Query: 169 TGCAGAVTRCLPRRRTVRG---PACGDRLCGSCDGAFPGGGQCG--DRLCRSCDSPFPGG 223
+GC V C P V +CG CGSC G+ G CG C SC G
Sbjct: 60 SGCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGGSKRGCVSCGVSKGACGSCGGSKGGC 119
Query: 224 GWCGDRL--CGSCDTVPSPAGDGAVTGCAG 251
G CG CGSC S G G+ G G
Sbjct: 120 GSCGGSKGGCGSCG--GSKGGCGSCGGSKG 147
Score = 33.9 bits (76), Expect = 0.17
Identities = 28/97 (28%), Positives = 31/97 (31%), Gaps = 20/97 (20%)
Query: 169 TGCAGAVTRCLPRRRTVRGPACGDRLCGSCDGAFPGGGQCGDRLC--------RSCDSPF 220
+GC G + C G CG CG C G G CG C C P
Sbjct: 26 SGCGGCGSGC-----GGCGSGCGG--CGGCGSGCAGCGGCGSGCCVPVCCCKPMCCCVPA 78
Query: 221 PGGGWCGDRLCGSC-----DTVPSPAGDGAVTGCAGA 252
CG CGSC V GA C G+
Sbjct: 79 CSCSSCGKGGCGSCGGSKRGCVSCGVSKGACGSCGGS 115
>gi|122937321 UNC homeobox [Homo sapiens]
Length = 531
Score = 38.9 bits (89), Expect = 0.005
Identities = 72/274 (26%), Positives = 88/274 (32%), Gaps = 48/274 (17%)
Query: 3 GQVQKAHFQKSKPDRRLQLRIGIPGSLDGVSDHPGGAPALSDNGALSPPRA--------I 54
G A + + Q R G P D S PG A A + GA P+A +
Sbjct: 279 GTCDPAFYPSQRSGAGPQPRPGRPADKDAASCGPGAAVAAVERGAAGLPKASPFSVESLL 338
Query: 55 SGSPQNPTLSGNGALSPPRAISGSPQNP----TLSGNG--ALSPPRAISG--SPQNPTLS 106
S SP + N A + + +P P TL G G L P G PQ
Sbjct: 339 SDSPPRRKAASNAAAAAAAGLDFAPGLPCAPRTLIGKGHFLLYPITQPLGFLVPQAALKG 398
Query: 107 GNGALSPPRAISGSPQNPTLSVCTRYITGAVVGAGEGAVDTCFMTGCAEAVTVPSPAEDS 166
G G P+ +P P GA G G GA D+ F +AV P
Sbjct: 399 GAGLEPAPKDAPPAPAVPPAPPAQASF-GAFSGPG-GAPDSAFARRSPDAVASP------ 450
Query: 167 AVTGCAGAVTRCLPRRRTVRGPACGDRLCGSCDGAFPGGGQCGDRLCRSCDSPFPGGGWC 226
GA R + A + G C A G G SP PG
Sbjct: 451 ------GAPAPAPAPFRDLASAAATEGGGGDCADA----GTAGPAPPPPAPSPRPG---- 496
Query: 227 GDRLCGSCDTVPSPAGDGAVTGC--AGAVTVPSP 258
PSPA + A G GA PSP
Sbjct: 497 --------PRPPSPAEEPATCGVPEPGAAAGPSP 522
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.135 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,650,300
Number of Sequences: 37866
Number of extensions: 1026555
Number of successful extensions: 5791
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 389
Number of HSP's that attempted gapping in prelim test: 3719
Number of HSP's gapped (non-prelim): 1725
length of query: 286
length of database: 18,247,518
effective HSP length: 101
effective length of query: 185
effective length of database: 14,423,052
effective search space: 2668264620
effective search space used: 2668264620
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.