LOC729240 21243

Name: LOC729240	Sequence: fasta or formatted (221aa)		NCBI GI: 239752488
Description: PREDICTED: FLJ40296 protein family member		Not currently referenced in the text
Other entries for this name: alt mRNA {221aa} hypothetical protein LOC729240
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.4 23 2 C cysteine 1.4 3 2 D aspartate 4.1 9 1 E glutamate 7.2 16 2 F phenylalanine 2.3 5 1 G glycine 13.1 29 2 H histidine 1.8 4 2 I isoleucine 2.7 6 1 K lysine 1.4 3 1 L leucine 4.5 10 1 M methionine 1.4 3 1 N asparagine 0.5 1 1 P proline 17.2 38 3 Q glutamine 7.7 17 1 R arginine 8.6 19 3 S serine 4.1 9 1 T threonine 3.6 8 1 V valine 5.9 13 1 W tryptophan 0.5 1 1 Y tyrosine 1.8 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: FLJ40296 protein family member PRR20 1.000 proline rich 20 LOC729250 1.000 hypothetical protein LOC729250 LOC729246 1.000 hypothetical protein LOC729246 LOC729240 1.000 hypothetical protein LOC729240 LOC729233 1.000 hypothetical protein LOC729233 LOC100130883 0.439 PREDICTED: similar to proline rich 20 LOC100130883 0.439 PREDICTED: similar to proline rich 20 PRB3 0.077 proline-rich protein BstNI subfamily 3 precursor [H... PRB1 0.061 proline-rich protein BstNI subfamily 1 isoform 1 pre... COL2A1 0.059 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.059 collagen, type II, alpha 1 isoform 2 precursor [Hom... PRB2 0.057 proline-rich protein BstNI subfamily 2 COL1A1 0.057 alpha 1 type I collagen preproprotein COL16A1 0.052 alpha 1 type XVI collagen precursor C2orf55 0.052 hypothetical protein LOC343990 COL8A1 0.052 alpha 1 type VIII collagen precursor COL8A1 0.052 alpha 1 type VIII collagen precursor PRB4 0.052 proline-rich protein BstNI subfamily 4 precursor [Ho... LOC100131455 0.050 PREDICTED: hypothetical protein COL11A2 0.050 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.050 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.050 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL1A2 0.050 alpha 2 type I collagen SYN1 0.050 synapsin I isoform Ia SYN1 0.050 synapsin I isoform Ib SAMD1 0.050 sterile alpha motif domain containing 1 LOC100131455 0.048 PREDICTED: hypothetical protein LOC100131455 0.048 PREDICTED: hypothetical protein COL5A3 0.048 collagen, type V, alpha 3 preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.