| Name: LOC100130883 | Sequence: fasta or formatted (210aa) | NCBI GI: 169166067 | |
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Description: PREDICTED: similar to proline rich 20
| Not currently referenced in the text | ||
Other entries for this name:
alt mRNA {210aa} PREDICTED: similar to proline rich 20 | |||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 11.0 23 2 C cysteine 0.5 1 1 D aspartate 1.9 4 1 E glutamate 5.7 12 2 F phenylalanine 2.4 5 1 G glycine 12.9 27 3 H histidine 2.9 6 1 I isoleucine 1.4 3 1 K lysine 1.4 3 1 L leucine 6.2 13 2 M methionine 2.4 5 1 N asparagine 1.4 3 1 P proline 15.7 33 3 Q glutamine 6.2 13 1 R arginine 8.6 18 2 S serine 7.1 15 2 T threonine 3.8 8 1 V valine 6.7 14 1 W tryptophan 0.5 1 1 Y tyrosine 1.4 3 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: similar to proline rich 20 LOC100130883 1.000 PREDICTED: similar to proline rich 20 LOC729240 0.472 PREDICTED: FLJ40296 protein family member PRR20 0.472 proline rich 20 LOC729250 0.472 hypothetical protein LOC729250 LOC729246 0.472 hypothetical protein LOC729246 LOC729240 0.472 hypothetical protein LOC729240 LOC729233 0.472 hypothetical protein LOC729233 TAF4 0.056 TBP-associated factor 4 LOC283999 0.041 hypothetical protein LOC283999 COL4A3 0.041 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.041 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.041 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.041 alpha 3 type IV collagen isoform 1 precursor LMTK3 0.039 lemur tyrosine kinase 3 COL5A3 0.039 collagen, type V, alpha 3 preproprotein RBMXL2 0.039 testes-specific heterogenous nuclear ribonucleoprot... COL2A1 0.036 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.036 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL7A1 0.036 alpha 1 type VII collagen precursor ARID1A 0.036 AT rich interactive domain 1A isoform a ARID1A 0.036 AT rich interactive domain 1A isoform b C9orf75 0.036 hypothetical protein LOC286262 isoform 2 C9orf75 0.036 hypothetical protein LOC286262 isoform 1 LOC100293055 0.036 PREDICTED: similar to COL22A1 protein LOC100131455 0.036 PREDICTED: hypothetical protein LOC100131455 0.036 PREDICTED: hypothetical protein PRRT1 0.036 NG5 protein COL22A1 0.036 collagen, type XXII, alpha 1 CSF2RB 0.036 colony stimulating factor 2 receptor, beta precursor ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
