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Search of human proteins with 239752449
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752449 PREDICTED: hypothetical protein [Homo sapiens]
(170 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752449 PREDICTED: hypothetical protein [Homo sapiens] 350 3e-97
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 80 8e-16
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 73 1e-13
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho... 72 2e-13
gi|117553580 adaptor-related protein complex 3, delta 1 subunit ... 69 2e-12
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 69 3e-12
gi|239750213 PREDICTED: hypothetical protein [Homo sapiens] 65 2e-11
gi|27883882 P18SRP protein [Homo sapiens] 65 3e-11
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 61 5e-10
gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1 [... 60 7e-10
gi|71143141 cyclic nucleotide gated channel alpha 1 isoform 2 [H... 60 7e-10
gi|168229156 NFKB activating protein [Homo sapiens] 60 1e-09
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 58 3e-09
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 58 3e-09
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 58 3e-09
gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo ... 57 1e-08
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f... 57 1e-08
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 57 1e-08
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d... 57 1e-08
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ... 57 1e-08
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 57 1e-08
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi... 55 2e-08
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 55 2e-08
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 55 2e-08
gi|167614488 TBC1 domain family, member 10B [Homo sapiens] 55 3e-08
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 55 3e-08
gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo ... 55 3e-08
gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo... 55 4e-08
gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo... 55 4e-08
gi|11067749 bromodomain containing protein 3 [Homo sapiens] 55 4e-08
>gi|239752449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 350 bits (898), Expect = 3e-97
Identities = 170/170 (100%), Positives = 170/170 (100%)
Query: 1 MLGHIFPGTGNLLPYEAAHFISGHFDHHILFHVYVSQIHPLLSKIITPCLLSTHSTHSDP 60
MLGHIFPGTGNLLPYEAAHFISGHFDHHILFHVYVSQIHPLLSKIITPCLLSTHSTHSDP
Sbjct: 1 MLGHIFPGTGNLLPYEAAHFISGHFDHHILFHVYVSQIHPLLSKIITPCLLSTHSTHSDP 60
Query: 61 SATVLPGSSTHRLKGKIFHLISIAFCDAGPSLHLPLHGLPQREEKKEKEKEKKKKKKKKK 120
SATVLPGSSTHRLKGKIFHLISIAFCDAGPSLHLPLHGLPQREEKKEKEKEKKKKKKKKK
Sbjct: 61 SATVLPGSSTHRLKGKIFHLISIAFCDAGPSLHLPLHGLPQREEKKEKEKEKKKKKKKKK 120
Query: 121 KKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGAKIH 170
KKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGAKIH
Sbjct: 121 KKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGAKIH 170
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 80.1 bits (196), Expect = 8e-16
Identities = 31/61 (50%), Positives = 58/61 (95%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
QR+E++EKE+ K+KK+KKK+++K++ ++++KKKK++K+++R+ K++R+RKRKK+RKKK++
Sbjct: 85 QRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRR 144
Query: 161 K 161
K
Sbjct: 145 K 145
Score = 73.6 bits (179), Expect = 8e-14
Identities = 30/72 (41%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
Query: 98 GLPQREEKKE-KEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
G +R++KKE KE+E++ K+++++K+KK++KKK++K++K++K++ KR+RKRK+++K++R+
Sbjct: 110 GRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEERE 169
Query: 157 KKKKKTGNEGAK 168
KK+++ E K
Sbjct: 170 KKRERNRKERKK 181
Score = 71.6 bits (174), Expect = 3e-13
Identities = 25/61 (40%), Positives = 58/61 (95%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+RE+++++ +EK+++K+KK+KKK+++K++ ++++KKKK++++R+R+ K++R++KRKK++K
Sbjct: 81 EREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRK 140
Query: 161 K 161
K
Sbjct: 141 K 141
Score = 71.2 bits (173), Expect = 4e-13
Identities = 26/61 (42%), Positives = 56/61 (91%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+RE +KE+++E+ KK+KKK+KK+++ K++++K+K+++K++++R+ K +RKRKK++KK+++
Sbjct: 47 KREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRER 106
Query: 161 K 161
K
Sbjct: 107 K 107
Score = 70.9 bits (172), Expect = 5e-13
Identities = 25/65 (38%), Positives = 60/65 (92%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
++ +K+E+ KE+++K+K+++K++K++++K+++K+KK+KKKR+RK++ +R+RKKK+++K++
Sbjct: 64 KKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKER 123
Query: 161 KTGNE 165
+ N+
Sbjct: 124 ERENK 128
Score = 70.9 bits (172), Expect = 5e-13
Identities = 27/68 (39%), Positives = 56/68 (82%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+RE K+ +E+KKKK++K+++++ K+++++K+KK++KKKR+++RKR+++R K+ +K+KK
Sbjct: 103 KRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKK 162
Query: 161 KTGNEGAK 168
+ E K
Sbjct: 163 RKKEEREK 170
Score = 70.5 bits (171), Expect = 7e-13
Identities = 26/61 (42%), Positives = 54/61 (88%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+ + K+E+EKE+K+++ KK+KKK+KK+++ K++++K+K++ K++++R+ K ++KRKK+KK
Sbjct: 43 REKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKK 102
Query: 161 K 161
K
Sbjct: 103 K 103
Score = 70.5 bits (171), Expect = 7e-13
Identities = 26/68 (38%), Positives = 59/68 (86%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+RE+++++E+ KK+KKK+KK+++ K++++K+K+++K++K+R+ K +RKRK++KK++++K+
Sbjct: 49 EREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQ 108
Query: 161 KTGNEGAK 168
+ E K
Sbjct: 109 RGRRERKK 116
Score = 70.5 bits (171), Expect = 7e-13
Identities = 28/70 (40%), Positives = 59/70 (84%), Gaps = 2/70 (2%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKK--KKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
+RE K+ +E+++KK++KKK++K++K++K+ K+++K+KK+KK +R++KR+R RK+++K++
Sbjct: 124 ERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKER 183
Query: 159 KKKTGNEGAK 168
++K E K
Sbjct: 184 ERKERRERKK 193
Score = 69.7 bits (169), Expect = 1e-12
Identities = 25/65 (38%), Positives = 58/65 (89%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
++E+KK K++E+ K++++K+K+++K++K++++K+++K+KK K+KR+RK++ +++RKKKK+
Sbjct: 60 KKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKE 119
Query: 161 KTGNE 165
+ E
Sbjct: 120 RKERE 124
Score = 69.3 bits (168), Expect = 1e-12
Identities = 27/67 (40%), Positives = 58/67 (86%), Gaps = 2/67 (2%)
Query: 101 QREEKKEKEKEKKKKK--KKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
+++E+KE+E+E K+++ K+KK++KKK++K++K++K++ K++RKRK+++K +R+KKR++
Sbjct: 116 KKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERN 175
Query: 159 KKKTGNE 165
+K+ E
Sbjct: 176 RKERKKE 182
Score = 68.9 bits (167), Expect = 2e-12
Identities = 25/68 (36%), Positives = 58/68 (85%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+R+E+K +++ K+++K+KK+KK++++KK+++ +K++KK+R+RK +R+RK+++K++++KK
Sbjct: 143 RRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKK 202
Query: 161 KTGNEGAK 168
K + K
Sbjct: 203 KERKKDRK 210
Score = 68.6 bits (166), Expect = 3e-12
Identities = 25/65 (38%), Positives = 55/65 (84%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+ EK+++E+EK++K+++ KK+KKK+KK+++ K++++K+K + K++++R+ K++RK+KK+
Sbjct: 41 REREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKE 100
Query: 161 KTGNE 165
K E
Sbjct: 101 KKKRE 105
Score = 68.6 bits (166), Expect = 3e-12
Identities = 24/68 (35%), Positives = 58/68 (85%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+R+ ++EKE+++++ KK+KKK+KK+++ K++++K+K+++K++++R+ K +RK+K++KKK+
Sbjct: 45 KRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKR 104
Query: 161 KTGNEGAK 168
+ G +
Sbjct: 105 ERKQRGRR 112
Score = 68.6 bits (166), Expect = 3e-12
Identities = 30/71 (42%), Positives = 58/71 (81%), Gaps = 6/71 (8%)
Query: 101 QREEKKEKEK---EKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRK---RKKK 154
++E K+EKE+ E+K+KK+KK++++KK+++ +K++KK++++K +R+RK++RK RKKK
Sbjct: 144 RKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKK 203
Query: 155 RKKKKKKTGNE 165
+KK +KT +
Sbjct: 204 ERKKDRKTDRQ 214
Score = 68.2 bits (165), Expect = 3e-12
Identities = 26/69 (37%), Positives = 57/69 (82%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
P + + E++KE+++++K+K++++K++K+++ KK+KKK+KKR+R ++R+RKRK++ K++K
Sbjct: 28 PCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRK 87
Query: 160 KKTGNEGAK 168
++ E K
Sbjct: 88 ERREKERRK 96
Score = 68.2 bits (165), Expect = 3e-12
Identities = 23/68 (33%), Positives = 61/68 (89%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK 157
G +++++K++E+ K++++K+K+++K++K++++K+++K+KK+K+KR+RK++ +R++K+KK
Sbjct: 59 GKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKK 118
Query: 158 KKKKTGNE 165
++K+ E
Sbjct: 119 ERKERERE 126
Score = 67.8 bits (164), Expect = 4e-12
Identities = 28/73 (38%), Positives = 56/73 (76%), Gaps = 5/73 (6%)
Query: 101 QREEKKEKEKEKKKKKKKKKK-----KKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKR 155
QR E+K K++ KKK++K++K+ K+++K+KK+KK++++KK++R RK ++K + +K+R
Sbjct: 129 QRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKER 188
Query: 156 KKKKKKTGNEGAK 168
+++KK+ E K
Sbjct: 189 RERKKERKKERRK 201
Score = 67.8 bits (164), Expect = 4e-12
Identities = 27/66 (40%), Positives = 58/66 (87%), Gaps = 5/66 (7%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKK-----KKKKKKKKRKRKRKRKRKRKKKR 155
+++ +KE+++EK++ K+++K+KK+KK++++KK K++KK+++RK +R+RK++RKK+R
Sbjct: 140 KKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKER 199
Query: 156 KKKKKK 161
+KKK++
Sbjct: 200 RKKKER 205
Score = 67.0 bits (162), Expect = 7e-12
Identities = 23/68 (33%), Positives = 59/68 (86%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+++E++E+EK K++++K++K+++ KK+KKK+KK+++ K++ +++++R+++RK++R+K+++
Sbjct: 36 RKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERR 95
Query: 161 KTGNEGAK 168
K E K
Sbjct: 96 KRKKEKKK 103
Score = 66.6 bits (161), Expect = 1e-11
Identities = 23/65 (35%), Positives = 57/65 (87%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+RE KE+E+++K+++K++K++++K+++K+KK+KKK+++K++ +R+RK+K+++K ++++
Sbjct: 68 KRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKEREREN 127
Query: 161 KTGNE 165
K E
Sbjct: 128 KQRRE 132
Score = 60.8 bits (146), Expect = 5e-10
Identities = 20/61 (32%), Positives = 53/61 (86%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK 157
G +R+ KK K++E++KK+++ +K++KK++++K+++++KK++K++R++K++RK+ +K +
Sbjct: 154 GKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKKDRKTDR 213
Query: 158 K 158
+
Sbjct: 214 Q 214
Score = 44.3 bits (103), Expect = 5e-05
Identities = 18/63 (28%), Positives = 42/63 (66%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+R K+ K++ ++K+++++KK++KK+++KKK++KK +K R+ + R ++ +
Sbjct: 173 ERNRKERKKERERKERRERKKERKKERRKKKERKKDRKTDRQTDSQVFRPLRESAFNRVT 232
Query: 161 KTG 163
TG
Sbjct: 233 VTG 235
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 72.8 bits (177), Expect = 1e-13
Identities = 32/65 (49%), Positives = 53/65 (81%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+ EE +E E+E++K+ K+K+K+K+K+K+K+KKKK K+ +KRK K + ++KRK+KRKKKK+
Sbjct: 12 ETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKE 71
Query: 161 KTGNE 165
+ E
Sbjct: 72 EEERE 76
Score = 71.2 bits (173), Expect = 4e-13
Identities = 30/63 (47%), Positives = 54/63 (85%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
E ++E+EKE K+K+K+K+K+K+K+KKKK K+ +K+K+K + ++KRKRKRKKK+++++++
Sbjct: 18 ETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREE 77
Query: 163 GNE 165
E
Sbjct: 78 EEE 80
Score = 70.9 bits (172), Expect = 5e-13
Identities = 29/65 (44%), Positives = 56/65 (86%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+ EE++EKE ++K+K+K+K+K+K+KKKK K+ +K+K+K++ ++KRKRKRK+KK+ +++++
Sbjct: 18 ETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREE 77
Query: 161 KTGNE 165
+ E
Sbjct: 78 EEEEE 82
Score = 69.3 bits (168), Expect = 1e-12
Identities = 29/65 (44%), Positives = 53/65 (81%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+ E+ E+E+EK+ K+K+K+K+K+K+K+KKKK K+ +K+K K + ++KRKRK+K+KK+++
Sbjct: 14 EETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEE 73
Query: 161 KTGNE 165
+ E
Sbjct: 74 EREEE 78
Score = 68.2 bits (165), Expect = 3e-12
Identities = 32/76 (42%), Positives = 55/76 (72%), Gaps = 15/76 (19%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKK---------------KKKKKKKKKKKKKKKKKRKRKR 145
+ E++KEKE+E+KK+K+K+KKKK K++++K++ +++KKKKKR+RK
Sbjct: 48 ETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKE 107
Query: 146 KRKRKRKKKRKKKKKK 161
+ + K+KK+R+K KKK
Sbjct: 108 EEEEKKKKRRRKTKKK 123
Score = 67.4 bits (163), Expect = 6e-12
Identities = 26/65 (40%), Positives = 57/65 (87%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+ EE+KE ++++K+K+K+K+K+KKKK K+ +K+K+K+++++KRKRKRK+K++++ +++++
Sbjct: 20 EEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEE 79
Query: 161 KTGNE 165
+ E
Sbjct: 80 EEEEE 84
Score = 67.4 bits (163), Expect = 6e-12
Identities = 26/68 (38%), Positives = 56/68 (82%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
++E++KEK KEK+KKKK K+ +K+K+K++++KK+K+K+KK+K + +R+ + +++ ++K++
Sbjct: 29 RKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEE 88
Query: 161 KTGNEGAK 168
+ EG +
Sbjct: 89 EEKEEGRR 96
Score = 66.2 bits (160), Expect = 1e-11
Identities = 37/94 (39%), Positives = 59/94 (62%), Gaps = 26/94 (27%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKK-KKKKKKKKKKKKKKKRKRKRKRK----------- 148
+ EEK+ K KEK+K+K+K+K+KKKK K+ +K+K+K++++KKRKRKRK+K
Sbjct: 21 EEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEE 80
Query: 149 --------------RKRKKKRKKKKKKTGNEGAK 168
R+RKKK+K+++K+ E K
Sbjct: 81 EEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKK 114
Score = 65.1 bits (157), Expect = 3e-11
Identities = 31/88 (35%), Positives = 58/88 (65%), Gaps = 26/88 (29%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKK---------------------- 138
++E++KEKEK+KK K+ +K+K+K++++KK+K+K+KKKK
Sbjct: 33 RKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKE 92
Query: 139 ----KKRKRKRKRKRKRKKKRKKKKKKT 162
+K+K+KR+RK + ++K+KK+++KT
Sbjct: 93 EGRRRKKKKKRRRKEEEEEKKKKRRRKT 120
Score = 64.3 bits (155), Expect = 5e-11
Identities = 28/62 (45%), Positives = 48/62 (77%)
Query: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTG 163
E+ E+ +E +++++K+ K+K+K+K+K+K+K+KKKK K KRK K + +KKRK+K+KK
Sbjct: 11 EETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKK 70
Query: 164 NE 165
E
Sbjct: 71 EE 72
Score = 62.0 bits (149), Expect = 2e-10
Identities = 29/69 (42%), Positives = 52/69 (75%), Gaps = 4/69 (5%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRK----RKKKRK 156
+++E +E E+ ++ +++++K+ K+K+K+K+K+K+K+KKKK K KRK K +K+KRK
Sbjct: 6 KKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRK 65
Query: 157 KKKKKTGNE 165
+KKKK E
Sbjct: 66 RKKKKEEEE 74
Score = 53.5 bits (127), Expect = 8e-08
Identities = 23/60 (38%), Positives = 45/60 (75%)
Query: 109 EKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGAK 168
+K+KKKKK+ ++ ++ ++ +++++K+ K+K+KRK KRK K K+KK ++ +K+K E K
Sbjct: 1 KKKKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEK 60
Score = 34.7 bits (78), Expect = 0.041
Identities = 13/30 (43%), Positives = 25/30 (83%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKK 127
G ++++KK + KE++++KKKK+++K KKK
Sbjct: 94 GRRRKKKKKRRRKEEEEEKKKKRRRKTKKK 123
>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
sapiens]
Length = 929
Score = 72.0 bits (175), Expect = 2e-13
Identities = 34/63 (53%), Positives = 50/63 (79%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
LP EK +EKEK K+K+KKK KK+KKKKK+K+K+KK+K++ K KR+R+++ K+K K K
Sbjct: 682 LPVLPEKLFEEKEKVKEKEKKKDKKEKKKKKEKEKEKKEKEREKEKREREKREKEKEKHK 741
Query: 159 KKK 161
+K
Sbjct: 742 HEK 744
Score = 71.6 bits (174), Expect = 3e-13
Identities = 39/71 (54%), Positives = 58/71 (81%), Gaps = 4/71 (5%)
Query: 90 PSLHLPLHGLPQRE-EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRK 148
PSL LP+ LP++ E+KEK KEK+KKK KK+KKKKK+K+K+KK+K+++K+KR+R+++ K
Sbjct: 679 PSL-LPV--LPEKLFEEKEKVKEKEKKKDKKEKKKKKEKEKEKKEKEREKEKREREKREK 735
Query: 149 RKRKKKRKKKK 159
K K K +K K
Sbjct: 736 EKEKHKHEKIK 746
Score = 63.2 bits (152), Expect = 1e-10
Identities = 27/61 (44%), Positives = 52/61 (85%)
Query: 109 EKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGAK 168
EK ++K+K K+K+KKK KK+KKKKK+K+K+K++++R+++++ ++KR+K+K+K +E K
Sbjct: 687 EKLFEEKEKVKEKEKKKDKKEKKKKKEKEKEKKEKEREKEKREREKREKEKEKHKHEKIK 746
Query: 169 I 169
+
Sbjct: 747 V 747
Score = 55.5 bits (132), Expect = 2e-08
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 95 PLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKK 154
PLH + E+K K + KKK KK+ K K KKK+K++ ++++K K K K K K K K
Sbjct: 504 PLHKV---YEEKTKLPSSVEVKKKLKKELKTKMKKKEKQRDREREKDKNKDKSKEKDKVK 560
Query: 155 RKKKKKKTGNE 165
K+K K+TG E
Sbjct: 561 EKEKDKETGRE 571
Score = 47.4 bits (111), Expect = 6e-06
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK 157
LP E K+K K++ K K KKK+K++ ++++K K K K K+K K K K K K + K
Sbjct: 515 LPSSVEVKKKLKKELKTKMKKKEKQRDREREKDKNKDKSKEKDKVKEKEKDKETGRETK 573
Score = 47.4 bits (111), Expect = 6e-06
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 51/134 (38%)
Query: 85 FCDAGPSLHLPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKK------------ 132
F D P + L GL ++E++K K+K+K ++K KK K K++K+K K K
Sbjct: 595 FEDVDPKVKLK-DGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKDKGREDKMKAPAPP 653
Query: 133 --------------------------------------KKKKKKKKRKRKRKRKRKRKKK 154
+K+K K+K K+K K+++K+KK+
Sbjct: 654 LVLPPKELALPLFSPATASRVPAMLPSLLPVLPEKLFEEKEKVKEKEKKKDKKEKKKKKE 713
Query: 155 RKKKKKKTGNEGAK 168
++K+KK+ E K
Sbjct: 714 KEKEKKEKEREKEK 727
Score = 42.7 bits (99), Expect = 1e-04
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTG 163
+KK K++ K K KKK+K++ ++++K K K K K+K K K K K K ++ + K+
Sbjct: 522 KKKLKKELKTKMKKKEKQRDREREKDKNKDKSKEKDKVKEKEKDKETGRETKYPWKEFLK 581
Query: 164 NEGA 167
E A
Sbjct: 582 EEEA 585
Score = 42.0 bits (97), Expect = 3e-04
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 41/106 (38%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKK------------------------------ 130
QR+ ++EK+K K K K+K K K+K+K K+
Sbjct: 539 QRDREREKDKNKDKSKEKDKVKEKEKDKETGRETKYPWKEFLKEEEADPYKFKIKEFEDV 598
Query: 131 -----------KKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNE 165
+K+K+K K K+K + K K+ + K+ K+K K G E
Sbjct: 599 DPKVKLKDGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKDKGRE 644
Score = 41.2 bits (95), Expect = 4e-04
Identities = 19/61 (31%), Positives = 41/61 (67%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+++ KKE + + KKK+K++ ++++K K K K K+K K K++++ ++ R+ K K+ K
Sbjct: 522 KKKLKKELKTKMKKKEKQRDREREKDKNKDKSKEKDKVKEKEKDKETGRETKYPWKEFLK 581
Query: 161 K 161
+
Sbjct: 582 E 582
Score = 40.8 bits (94), Expect = 6e-04
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 105 KKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
K+ ++ + K K K +K+K+K K KKK ++K KK K KR++++ + K R+ K K
Sbjct: 593 KEFEDVDPKVKLKDGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKDKGREDKMK 648
Score = 40.0 bits (92), Expect = 0.001
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
P + + KE E K K K +K+K+K K KKK ++K K+ + ++ K K K K ++ K
Sbjct: 587 PYKFKIKEFEDVDPKVKLKDGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKDKGREDK 646
Query: 160 KK 161
K
Sbjct: 647 MK 648
Score = 39.7 bits (91), Expect = 0.001
Identities = 19/59 (32%), Positives = 38/59 (64%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
++E K K K+K+K++ ++++K K K K K+K K K+K+K K + + K+ K+++
Sbjct: 526 KKELKTKMKKKEKQRDREREKDKNKDKSKEKDKVKEKEKDKETGRETKYPWKEFLKEEE 584
Score = 39.3 bits (90), Expect = 0.002
Identities = 18/59 (30%), Positives = 40/59 (67%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
++E K + +K++K++ ++++K K K K K+K K K+K+K ++ R+ K K+ K+++
Sbjct: 526 KKELKTKMKKKEKQRDREREKDKNKDKSKEKDKVKEKEKDKETGRETKYPWKEFLKEEE 584
Score = 38.9 bits (89), Expect = 0.002
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 39/110 (35%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKK---KKKKKKKKKKKKKK--------------- 140
L + +KKEK+++++++K K K K K+K K+K+K K+ ++ K
Sbjct: 529 LKTKMKKKEKQRDREREKDKNKDKSKEKDKVKEKEKDKETGRETKYPWKEFLKEEEADPY 588
Query: 141 ---------------------RKRKRKRKRKRKKKRKKKKKKTGNEGAKI 169
RK K K K K+K + K KK K E K+
Sbjct: 589 KFKIKEFEDVDPKVKLKDGLVRKEKEKHKDKKKDREKGKKDKDKREKEKV 638
Score = 35.4 bits (80), Expect = 0.024
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 117 KKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGAKI 169
K ++K K + KKK KK+ K K K+K K++ +++ K K K E K+
Sbjct: 507 KVYEEKTKLPSSVEVKKKLKKELKTKMKKKEKQRDREREKDKNKDKSKEKDKV 559
Score = 35.0 bits (79), Expect = 0.031
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 111 EKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGAK 168
E K ++K K + KKK KK+ K K K+K K++ + ++K K K K + K
Sbjct: 503 EPLHKVYEEKTKLPSSVEVKKKLKKELKTKMKKKEKQRDREREKDKNKDKSKEKDKVK 560
>gi|117553580 adaptor-related protein complex 3, delta 1 subunit
isoform 2 [Homo sapiens]
Length = 1153
Score = 68.9 bits (167), Expect = 2e-12
Identities = 33/73 (45%), Positives = 49/73 (67%)
Query: 95 PLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKK 154
P +P E+K +K K+K+KK K+K++ K+KKK+K+KKK K KKK+ RK K +R + KK
Sbjct: 830 PEKDVPMVEKKSKKPKKKEKKHKEKERDKEKKKEKEKKKSPKPKKKKHRKEKEERTKGKK 889
Query: 155 RKKKKKKTGNEGA 167
+ KK+ E A
Sbjct: 890 KSKKQPPGSEEAA 902
Score = 60.8 bits (146), Expect = 5e-10
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 94 LPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK 153
LP+ E K EK+ +KK KK KKK+KK K+K++ K+KKK K K+K + +KK
Sbjct: 816 LPIQKHRNTETSKSPEKDVPMVEKKSKKPKKKEKKHKEKERDKEKKKEKEKKKSPKPKKK 875
Query: 154 KRKKKKKK 161
K +K+K++
Sbjct: 876 KHRKEKEE 883
Score = 59.7 bits (143), Expect = 1e-09
Identities = 27/74 (36%), Positives = 49/74 (66%)
Query: 90 PSLHLPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKR 149
P +P+ ++ KK+++K K+K++ K+KKK+K+KKK K KKKK +K+++ + K K+
Sbjct: 830 PEKDVPMVEKKSKKPKKKEKKHKEKERDKEKKKEKEKKKSPKPKKKKHRKEKEERTKGKK 889
Query: 150 KRKKKRKKKKKKTG 163
K KK+ ++ G
Sbjct: 890 KSKKQPPGSEEAAG 903
Score = 59.7 bits (143), Expect = 1e-09
Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 101 QREEKKEKEKEKKKKKKK--KKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
+++ KK K+KEKK K+K+ K+KKK+K+KKK K KKKK +K K +R + +K+ KK+
Sbjct: 838 EKKSKKPKKKEKKHKEKERDKEKKKEKEKKKSPKPKKKKHRKEKEERTKGKKKSKKQPPG 897
Query: 159 KKKTGNE 165
++ E
Sbjct: 898 SEEAAGE 904
Score = 59.3 bits (142), Expect = 2e-09
Identities = 27/77 (35%), Positives = 50/77 (64%)
Query: 92 LHLPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKR 151
L + H + + EK+ +KK KK KKK+KK K+K++ K+KKK+K K+K + +K+
Sbjct: 816 LPIQKHRNTETSKSPEKDVPMVEKKSKKPKKKEKKHKEKERDKEKKKEKEKKKSPKPKKK 875
Query: 152 KKKRKKKKKKTGNEGAK 168
K +++K+++ G + +K
Sbjct: 876 KHRKEKEERTKGKKKSK 892
Score = 52.8 bits (125), Expect = 1e-07
Identities = 29/70 (41%), Positives = 38/70 (54%)
Query: 92 LHLPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKR 151
L PL + +K + E K +K +KK KK KKK+KK K+K + K K+K K
Sbjct: 806 LDKPLADSEKLPIQKHRNTETSKSPEKDVPMVEKKSKKPKKKEKKHKEKERDKEKKKEKE 865
Query: 152 KKKRKKKKKK 161
KKK K KKK
Sbjct: 866 KKKSPKPKKK 875
Score = 45.1 bits (105), Expect = 3e-05
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 107 EKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEG 166
EK +K + + K +K +KK KK KKK K+ ++++R ++KK++K+KKK+
Sbjct: 814 EKLPIQKHRNTETSKSPEKDVPMVEKKSKKPKKKEKKHKEKERDKEKKKEKEKKKSPKPK 873
Query: 167 AKIH 170
K H
Sbjct: 874 KKKH 877
Score = 41.2 bits (95), Expect = 4e-04
Identities = 17/47 (36%), Positives = 35/47 (74%)
Query: 91 SLHLPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKK 137
S+ L + GLP ++ + E+E++ ++K +K K++KK+K+K+KK K++
Sbjct: 710 SVPLKVPGLPMSDQYVKLEEERRHRQKLEKDKRRKKRKEKEKKGKRR 756
Score = 38.5 bits (88), Expect = 0.003
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 95 PLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKK 154
P L +K + EK +K + + K +K +KK KK K+K K+ +++++
Sbjct: 798 PYRALDIDLDKPLADSEKLPIQKHRNTETSKSPEKDVPMVEKKSKKPKKKEKKHKEKERD 857
Query: 155 RKKKKKKTGNEGAK 168
++KKK+K + K
Sbjct: 858 KEKKKEKEKKKSPK 871
Score = 32.0 bits (71), Expect = 0.26
Identities = 12/31 (38%), Positives = 24/31 (77%)
Query: 125 KKKKKKKKKKKKKKKKRKRKRKRKRKRKKKR 155
K +++++ ++K +K KR++KRK K K+ K+R
Sbjct: 726 KLEEERRHRQKLEKDKRRKKRKEKEKKGKRR 756
Score = 31.6 bits (70), Expect = 0.34
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 135 KKKKKKRKRKRKRKRKRKKKRKKKKKK 161
K ++++R R++ K KR+KKRK+K+KK
Sbjct: 726 KLEEERRHRQKLEKDKRRKKRKEKEKK 752
Score = 30.4 bits (67), Expect = 0.77
Identities = 11/31 (35%), Positives = 24/31 (77%)
Query: 127 KKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK 157
K +++++ ++K +K KR++KRK K KK +++
Sbjct: 726 KLEEERRHRQKLEKDKRRKKRKEKEKKGKRR 756
Score = 30.4 bits (67), Expect = 0.77
Identities = 11/31 (35%), Positives = 24/31 (77%)
Query: 129 KKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
K +++++ ++K K KR++KRK K+K+ K++
Sbjct: 726 KLEEERRHRQKLEKDKRRKKRKEKEKKGKRR 756
Score = 30.4 bits (67), Expect = 0.77
Identities = 11/31 (35%), Positives = 24/31 (77%)
Query: 131 KKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
K +++++ +++ K KR++KRK+K KK K++
Sbjct: 726 KLEEERRHRQKLEKDKRRKKRKEKEKKGKRR 756
Score = 28.9 bits (63), Expect = 2.2
Identities = 9/40 (22%), Positives = 29/40 (72%)
Query: 126 KKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNE 165
K +++++ ++K +K ++RK+++++++K KR+ T ++
Sbjct: 726 KLEEERRHRQKLEKDKRRKKRKEKEKKGKRRHSSLPTESD 765
Score = 27.7 bits (60), Expect = 5.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 139 KKRKRKRKRKRKRKKKRKKKKKKTGNEGAKIH 170
K + +R R++ K KR+KK+K+ +G + H
Sbjct: 726 KLEEERRHRQKLEKDKRRKKRKEKEKKGKRRH 757
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 68.6 bits (166), Expect = 3e-12
Identities = 29/68 (42%), Positives = 57/68 (83%), Gaps = 1/68 (1%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
++E KKE+E E+KK++++++K+K++++K++K+++ KK+KK +RK K +R+RKK+R++K+
Sbjct: 48 RKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERK-KEERERKKRRREKEN 106
Query: 161 KTGNEGAK 168
K G E K
Sbjct: 107 KEGEEKEK 114
Score = 66.6 bits (161), Expect = 1e-11
Identities = 26/71 (36%), Positives = 61/71 (85%), Gaps = 3/71 (4%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKK---KKKKKKKKKRKRKRKRKRKRKKKRKK 157
+REE+KE+E++K++++K++++K++KK+++K+ K++++K+K+RK ++KR+R RK+++K+
Sbjct: 140 KREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKE 199
Query: 158 KKKKTGNEGAK 168
+++K E K
Sbjct: 200 RERKERRERKK 210
Score = 66.2 bits (160), Expect = 1e-11
Identities = 25/71 (35%), Positives = 62/71 (87%), Gaps = 3/71 (4%)
Query: 101 QREEKKEKEKEKKKKKKKKKKK---KKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK 157
+++E++EKE+E+K++KK+++K+ K++++K+K++K++KK+++ +++RK++R+RK++R++
Sbjct: 149 RKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRER 208
Query: 158 KKKKTGNEGAK 168
KK++ E K
Sbjct: 209 KKERKKKEERK 219
Score = 65.9 bits (159), Expect = 2e-11
Identities = 27/72 (37%), Positives = 56/72 (77%), Gaps = 6/72 (8%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKR------KRKRKKK 154
+++E++E+EK K++++K++K+++ KK+KK ++KK+++++K++R+ K K KRKKK
Sbjct: 59 RKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKK 118
Query: 155 RKKKKKKTGNEG 166
KK++ +T EG
Sbjct: 119 EKKERGRTSKEG 130
Score = 64.7 bits (156), Expect = 4e-11
Identities = 29/73 (39%), Positives = 58/73 (79%), Gaps = 12/73 (16%)
Query: 101 QREEKKE-KEKEKKKKKKKKK-----------KKKKKKKKKKKKKKKKKKKKRKRKRKRK 148
+RE KKE +EKE+++K++KK+ +K+K++K++KK+++ +K++K++R+RK +
Sbjct: 146 ERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKER 205
Query: 149 RKRKKKRKKKKKK 161
R+RKK+RKKK+++
Sbjct: 206 RERKKERKKKEER 218
Score = 64.7 bits (156), Expect = 4e-11
Identities = 26/61 (42%), Positives = 56/61 (91%), Gaps = 1/61 (1%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+RE K+ EKE+++K+K++K++KK+++ +K++KK++++K+R R+RK++RK+K++RKK+++
Sbjct: 165 KRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKER-RERKKERKKKEERKKERQ 223
Query: 161 K 161
K
Sbjct: 224 K 224
Score = 63.9 bits (154), Expect = 6e-11
Identities = 22/68 (32%), Positives = 56/68 (82%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+ EE+KEKE++++KK+++ +K++KK++++K+++++KK++K+K +RK++R++ ++ ++K
Sbjct: 174 KEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREK 233
Query: 161 KTGNEGAK 168
+ G K
Sbjct: 234 ERGKRERK 241
Score = 63.5 bits (153), Expect = 8e-11
Identities = 25/66 (37%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKK-KKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
+R++ EKE+E+K+K++K++KK+++ +K++KK++++K++++RK++RK+K +RKK+R+K +
Sbjct: 167 ERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDR 226
Query: 160 KKTGNE 165
+ E
Sbjct: 227 QTNWRE 232
Score = 62.4 bits (150), Expect = 2e-10
Identities = 25/65 (38%), Positives = 51/65 (78%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+ E+K++ +EK+ K+ ++K+K+KKK+KK++ + K+ K+R+RK +RKR+ +K+R++KK+
Sbjct: 93 EERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKE 152
Query: 161 KTGNE 165
+ E
Sbjct: 153 EREKE 157
Score = 62.4 bits (150), Expect = 2e-10
Identities = 23/72 (31%), Positives = 60/72 (83%), Gaps = 7/72 (9%)
Query: 101 QREEKKEKEKEKKKKKKKKKK-------KKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK 153
++E K+ +EKEK+KKK+KK++ K++++K+++K++++K+++++K +R+++R+RK+
Sbjct: 103 EKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKE 162
Query: 154 KRKKKKKKTGNE 165
++K+++K+ G +
Sbjct: 163 RKKRERKQVGEK 174
Score = 62.4 bits (150), Expect = 2e-10
Identities = 23/64 (35%), Positives = 57/64 (89%), Gaps = 3/64 (4%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRK---RKRKRKKKRKK 157
+R+E+K++E+ +K++KK++++K+++++KK++KKK+++KK+R++ R+ R+++R K+ +K
Sbjct: 182 ERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREKERGKRERK 241
Query: 158 KKKK 161
++KK
Sbjct: 242 ERKK 245
Score = 61.6 bits (148), Expect = 3e-10
Identities = 26/73 (35%), Positives = 58/73 (79%), Gaps = 8/73 (10%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKR--------KRKRKRKRKRK 152
++E+K E++KE++++KK++++K+ K+ ++K+K+KKK+KK+R +R+RK +RKR+
Sbjct: 83 KKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKRE 142
Query: 153 KKRKKKKKKTGNE 165
+++++++KK E
Sbjct: 143 ERKERERKKEERE 155
Score = 60.8 bits (146), Expect = 5e-10
Identities = 20/60 (33%), Positives = 54/60 (90%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+RE K+E+++E++K++++KK++++K++++K++KK+++K+ +++ +RK K +K+RKK+++
Sbjct: 132 ERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRER 191
Score = 60.1 bits (144), Expect = 9e-10
Identities = 26/66 (39%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 101 QREEKKEK-EKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
+RE KK + EKE K+ ++K+K+KKK+KK++ + K+ K+++RK +RKR+ +++++RKK++
Sbjct: 94 ERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEE 153
Query: 160 KKTGNE 165
++ E
Sbjct: 154 REKERE 159
Score = 59.3 bits (142), Expect = 2e-09
Identities = 20/60 (33%), Positives = 55/60 (91%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
R K+ KE+E+K+++K++++K++++KK++++K++++K+++KR+RK+ +++++RK+K++K
Sbjct: 125 RTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERK 184
Score = 59.3 bits (142), Expect = 2e-09
Identities = 22/65 (33%), Positives = 57/65 (87%), Gaps = 3/65 (4%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKR---KRKRKRKKKRKKKK 159
+E KE+E+++++K++++K++++KK++++K++++K++KKR+RK+ K + +++K+RK++K
Sbjct: 128 KEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERK 187
Query: 160 KKTGN 164
K+ N
Sbjct: 188 KRERN 192
Score = 59.3 bits (142), Expect = 2e-09
Identities = 20/61 (32%), Positives = 51/61 (83%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+ E K+E+ KE+++KK++++K++++K++KK+++K+ +K+ +RK K +++RKK+ + +K+
Sbjct: 136 KEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKE 195
Query: 161 K 161
+
Sbjct: 196 R 196
Score = 58.5 bits (140), Expect = 3e-09
Identities = 26/71 (36%), Positives = 53/71 (74%), Gaps = 3/71 (4%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKK---KRKRKRKRKRKRKKKRKK 157
+RE +KE+++E+ KK+KK ++KK+++++KK++++K+ K+ K KRK+K K++R + K+
Sbjct: 70 KREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKE 129
Query: 158 KKKKTGNEGAK 168
K++ E K
Sbjct: 130 GKERERKEERK 140
Score = 57.8 bits (138), Expect = 4e-09
Identities = 20/61 (32%), Positives = 51/61 (83%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+RE + E KE KK+++ ++KK++++++K+K++++K++K+ + K+++K +RKK+ +++KK
Sbjct: 40 EREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKK 99
Query: 161 K 161
+
Sbjct: 100 R 100
Score = 56.2 bits (134), Expect = 1e-08
Identities = 19/65 (29%), Positives = 55/65 (84%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+++EKKE+ + K+ K++++K+++K++++K++++KK++++++R+RK ++KR++K+ +K+
Sbjct: 116 KKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKE 175
Query: 161 KTGNE 165
+ E
Sbjct: 176 EERKE 180
>gi|239750213 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 65.5 bits (158), Expect = 2e-11
Identities = 30/43 (69%), Positives = 40/43 (93%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRK 144
+E++KEKEKEK+K+K+K+K+K+K+KKKKKKKKKKKKKKK K
Sbjct: 74 KEKEKEKEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKKKLNAK 116
Score = 65.1 bits (157), Expect = 3e-11
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 20/92 (21%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKK--------------------KKKKKKKKKKKK 137
G ++ KK+K+K+ KKKKK KKK K+K+K+K+K+K+
Sbjct: 26 GRKKKTTKKKKKKKTTMKKKKKTTTKKKTTTKTKKRTTTTKKTTTTTTKEKEKEKEKEKE 85
Query: 138 KKKRKRKRKRKRKRKKKRKKKKKKTGNEGAKI 169
K+K K K K K K+KKK+KKKKKK AK+
Sbjct: 86 KEKEKEKEKEKEKKKKKKKKKKKKKKKLNAKV 117
Score = 62.4 bits (150), Expect = 2e-10
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 29/89 (32%)
Query: 101 QREEKKEKEKEKKKKK---KKKKK--------------------------KKKKKKKKKK 131
+R KK+ K+KKKKK KKKKK K+K+K+K+K+
Sbjct: 24 KRGRKKKTTKKKKKKKTTMKKKKKTTTKKKTTTKTKKRTTTTKKTTTTTTKEKEKEKEKE 83
Query: 132 KKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
K+K+K+K+K K K K+K+K+KKK+KKKKK
Sbjct: 84 KEKEKEKEKEKEKEKKKKKKKKKKKKKKK 112
Score = 58.2 bits (139), Expect = 3e-09
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 26/89 (29%)
Query: 103 EEKKEKEKEKKKKKK--------------------------KKKKKKKKKKKKKKKKKKK 136
++KK+K+ KKKKK K+K+K+K+K+K+K+K+K+K
Sbjct: 33 KKKKKKKTTMKKKKKTTTKKKTTTKTKKRTTTTKKTTTTTTKEKEKEKEKEKEKEKEKEK 92
Query: 137 KKKKRKRKRKRKRKRKKKRKKKKKKTGNE 165
+K+K K+K+K+K+K+KKK+K K G E
Sbjct: 93 EKEKEKKKKKKKKKKKKKKKLNAKVCGLE 121
Score = 50.1 bits (118), Expect = 9e-07
Identities = 28/59 (47%), Positives = 33/59 (55%)
Query: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
EK EK+ K+ +KKK KKKKKKK KKKKK K+K K KK+ KK T
Sbjct: 11 EKVHVITEKESAWKRGRKKKTTKKKKKKKTTMKKKKKTTTKKKTTTKTKKRTTTTKKTT 69
Score = 43.1 bits (100), Expect = 1e-04
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
+E K EK +K+ K+ +KKK KKKKKKK +K+K+ +KK K KK+
Sbjct: 2 QELDKGVAMEKVHVITEKESAWKRGRKKKTTKKKKKKKTTMKKKKKTTTKKKTTTKTKKR 61
Query: 162 T 162
T
Sbjct: 62 T 62
>gi|27883882 P18SRP protein [Homo sapiens]
Length = 155
Score = 65.1 bits (157), Expect = 3e-11
Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 11/70 (15%)
Query: 101 QREEKKEKEKEKKKKKKKKKK-----------KKKKKKKKKKKKKKKKKKKRKRKRKRKR 149
+ E+KKEK KEK K KKK+K+ K+KK+K +KK+KKK+KK + +K K +
Sbjct: 73 EEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHK 132
Query: 150 KRKKKRKKKK 159
K KKKRKK+K
Sbjct: 133 KEKKKRKKEK 142
Score = 60.5 bits (145), Expect = 7e-10
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 13/83 (15%)
Query: 96 LHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKK-------------KKKKKKKKKKKRK 142
L+ L +EK+ E+E+KKK+K K+K K KKK+K K+KK+K +KK++K
Sbjct: 59 LNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKK 118
Query: 143 RKRKRKRKRKKKRKKKKKKTGNE 165
+++K K K+ K KK+KKK E
Sbjct: 119 KEKKSKSKKGKHHKKEKKKRKKE 141
Score = 50.1 bits (118), Expect = 9e-07
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 11/79 (13%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKR-----------KRKRKRKR 151
+E+ E+ + + ++K+ ++++KKK+K K+K K KKKRKR +++K+K
Sbjct: 53 DEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKY 112
Query: 152 KKKRKKKKKKTGNEGAKIH 170
+KK KKK+KK+ ++ K H
Sbjct: 113 QKKEKKKEKKSKSKKGKHH 131
Score = 49.3 bits (116), Expect = 2e-06
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 107 EKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
E++ K+KK+K +KK+KKK+KK K KK K KK++K+++K K + +K
Sbjct: 101 EEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
Score = 48.9 bits (115), Expect = 2e-06
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 11/79 (13%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKK-----------KRKRKRKRKR 149
+ EE + + ++K+ ++++KKK+K K+K K KKK+K+ +++K+K ++
Sbjct: 55 ENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQK 114
Query: 150 KRKKKRKKKKKKTGNEGAK 168
K KKK KK K K G K
Sbjct: 115 KEKKKEKKSKSKKGKHHKK 133
Score = 48.9 bits (115), Expect = 2e-06
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRK 152
++KK+K ++K+KKK+KK K KK K KK+KKK+KK+K + RK
Sbjct: 106 KQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
Score = 48.5 bits (114), Expect = 3e-06
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
E+ +++K+K +KK+KKK+KK K KK K KK+KKK+K+++ + RK
Sbjct: 102 EDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
Score = 48.1 bits (113), Expect = 4e-06
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
EE K+K K+K +KK+KKK+KK K KK K KK+KKKRK+++ + +K
Sbjct: 101 EEDTSKQK-KQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
Score = 47.8 bits (112), Expect = 5e-06
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRK 146
Q+ +KKEK+KEKK K KK K KK+KKK+KK+K + RK
Sbjct: 110 QKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
Score = 47.0 bits (110), Expect = 8e-06
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRK 150
+++++K ++KEKKK+KK K KK K KK+KKK+KK+K + RK
Sbjct: 106 KQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK 155
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 60.8 bits (146), Expect = 5e-10
Identities = 20/63 (31%), Positives = 54/63 (85%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+R+ ++E+E+++++++K++ +++++ +++++KK++KK+RK++RK K+K +K+R+ KK+
Sbjct: 135 ERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERKEKKKEEKRREDKKR 194
Query: 161 KTG 163
K G
Sbjct: 195 KWG 197
Score = 57.0 bits (136), Expect = 8e-09
Identities = 20/67 (29%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRK-KKRKKKK 159
+RE ++++E+E+++++++K++ +++++ +++++KK++K++RK++RK K+K +KR++ K
Sbjct: 133 ERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERKEKKKEEKRREDK 192
Query: 160 KKTGNEG 166
K+ EG
Sbjct: 193 KRKWGEG 199
Score = 56.2 bits (134), Expect = 1e-08
Identities = 17/61 (27%), Positives = 54/61 (88%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
Q E ++++E+E+++++++++++++++K++ +++++ ++ +RK++RK++RKK+RK+KKK
Sbjct: 125 QTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERKEKKK 184
Query: 161 K 161
+
Sbjct: 185 E 185
Score = 55.5 bits (132), Expect = 2e-08
Identities = 16/61 (26%), Positives = 54/61 (88%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+RE +E+E+++++++++++++++K++ +++++ ++++RK++RK++RK+++K KKK++
Sbjct: 127 ERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERKEKKKEE 186
Query: 161 K 161
K
Sbjct: 187 K 187
Score = 53.5 bits (127), Expect = 8e-08
Identities = 13/61 (21%), Positives = 56/61 (91%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+R+ ++E+++++++++++++++K++ +++++ +++++K++RK++RK++RK+K+K++K+
Sbjct: 129 ERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERKEKKKEEKR 188
Query: 161 K 161
+
Sbjct: 189 R 189
Score = 52.0 bits (123), Expect = 2e-07
Identities = 14/65 (21%), Positives = 55/65 (84%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+R+++ E+E+++++++++++++++++++++K++ +++++ + +RK++RKK+RKK++K
Sbjct: 121 ERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERK 180
Query: 161 KTGNE 165
+ E
Sbjct: 181 EKKKE 185
Score = 47.4 bits (111), Expect = 6e-06
Identities = 22/83 (26%), Positives = 55/83 (66%), Gaps = 16/83 (19%)
Query: 102 REEKKEKEKEKKKKKK---KKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKR--------- 149
RE K+E ++ +++ +K ++ K+ ++++ ++++++++++++R+R+R+RKR
Sbjct: 102 RERKRETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRW 161
Query: 150 ----KRKKKRKKKKKKTGNEGAK 168
+RKK+RKK++KK E K
Sbjct: 162 AEREERKKERKKERKKERKEKKK 184
Score = 46.2 bits (108), Expect = 1e-05
Identities = 17/68 (25%), Positives = 50/68 (73%), Gaps = 7/68 (10%)
Query: 101 QREEKKEKEKEKKKKKKKKKKK-------KKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK 153
QRE K++ ++E+ K + +++K+ + +K +++ K+ ++++ R+R+R+R+R+R++
Sbjct: 85 QRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQRQRERER 144
Query: 154 KRKKKKKK 161
+R++++K+
Sbjct: 145 QRQRERKR 152
Score = 45.8 bits (107), Expect = 2e-05
Identities = 15/60 (25%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKK-KKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
RE K++++E+K++ + +++ +K +++ K+ ++++ ++R+R+R+R+R+R+++R++K++
Sbjct: 94 RERDKDRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRE 153
Score = 45.4 bits (106), Expect = 2e-05
Identities = 13/61 (21%), Positives = 48/61 (78%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
QRE + + E+E + +++ + +++ ++ ++K+++++K++ R+R+R+R+ +R+ +R+++++
Sbjct: 24 QRERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERETERETERQRERQ 83
Query: 161 K 161
+
Sbjct: 84 R 84
Score = 45.1 bits (105), Expect = 3e-05
Identities = 16/65 (24%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Query: 97 HGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
H R+ +EKE+E ++K++ ++++++++ +++ +++++++++R+RKR+ R+R K R
Sbjct: 43 HRERDRQTDREKERE-RQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRD 101
Query: 157 KKKKK 161
+++K+
Sbjct: 102 RERKR 106
Score = 44.7 bits (104), Expect = 4e-05
Identities = 13/64 (20%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKK-KKRKRKRKRKRKRKKKRKKKK 159
+RE +KE++++++++++ +++ ++++++++++++K++ ++R + R R+RKR+ R +++
Sbjct: 55 ERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRER 114
Query: 160 KKTG 163
+ G
Sbjct: 115 NRKG 118
Score = 43.9 bits (102), Expect = 7e-05
Identities = 16/73 (21%), Positives = 55/73 (75%), Gaps = 6/73 (8%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKK---RKRKRKRKRKRKK---KR 155
RE+++E++KE+ ++++++++ +++ ++++++++++++K+ R+R + R R+RK+ +
Sbjct: 52 REKERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRN 111
Query: 156 KKKKKKTGNEGAK 168
+++ +K G E K
Sbjct: 112 RERNRKGGRERDK 124
Score = 43.5 bits (101), Expect = 9e-05
Identities = 16/61 (26%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 101 QREEKKEKEKE-KKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
QR+ ++E E+E ++++++++++++K++ +++ K + +++KR+ R R+R RK R++ K
Sbjct: 65 QRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDK 124
Query: 160 K 160
+
Sbjct: 125 Q 125
Score = 42.7 bits (99), Expect = 1e-04
Identities = 11/61 (18%), Positives = 48/61 (78%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+RE + E+E +++ + +++ ++ ++K+++++K++ ++R+R+R+ +R+ +++R+++++
Sbjct: 26 ERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERETERETERQRERQRQ 85
Query: 161 K 161
+
Sbjct: 86 R 86
Score = 42.7 bits (99), Expect = 1e-04
Identities = 13/64 (20%), Positives = 51/64 (79%), Gaps = 3/64 (4%)
Query: 101 QREEKKEKEKE---KKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK 157
QR+ +E++++ +K+++++K++ ++++++++ +++ +++++R+R+R+RKR+ ++R K
Sbjct: 39 QRDRHRERDRQTDREKERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDK 98
Query: 158 KKKK 161
+ +
Sbjct: 99 DRDR 102
Score = 42.4 bits (98), Expect = 2e-04
Identities = 12/61 (19%), Positives = 46/61 (75%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
QRE K+E ++ K+ ++++ ++++++ + +++ + +++ + R+R R+ R+++++R+K++
Sbjct: 4 QRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERD 63
Query: 161 K 161
+
Sbjct: 64 R 64
Score = 42.4 bits (98), Expect = 2e-04
Identities = 16/66 (24%), Positives = 47/66 (71%), Gaps = 5/66 (7%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKK-----RKRKRKRKRKRKKKR 155
QRE + E+E E+++++++++++K++ +++ K + +++K+ R+R RK R+R K+
Sbjct: 67 QRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQT 126
Query: 156 KKKKKK 161
++++ +
Sbjct: 127 ERERDR 132
Score = 42.0 bits (97), Expect = 3e-04
Identities = 10/61 (16%), Positives = 48/61 (78%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+R+ ++E+E + +++ + +++ + +++ ++ ++K+++++++R R+R+R+R+ +R+ +++
Sbjct: 20 ERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERETERETERQ 79
Query: 161 K 161
+
Sbjct: 80 R 80
Score = 41.6 bits (96), Expect = 3e-04
Identities = 11/61 (18%), Positives = 47/61 (77%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+R+ ++++E ++ K+ ++++ ++++++ + +++ + +++ R R+R R+ R+K+R+++K+
Sbjct: 2 ERQRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKE 61
Query: 161 K 161
+
Sbjct: 62 R 62
Score = 41.2 bits (95), Expect = 4e-04
Identities = 10/61 (16%), Positives = 47/61 (77%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+RE +++E+E + +++ + +++ + +++ ++ ++K+++R+++R R+R+R+++ +++ +
Sbjct: 18 ERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERETERETE 77
Query: 161 K 161
+
Sbjct: 78 R 78
Score = 41.2 bits (95), Expect = 4e-04
Identities = 10/60 (16%), Positives = 47/60 (78%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
R+ ++E + E++ + +++ + +++ ++ ++K+++++K+R R+R+R+R+ +++ ++++++
Sbjct: 23 RQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERETERETERQRER 82
Score = 40.4 bits (93), Expect = 7e-04
Identities = 11/61 (18%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKK-KKKRKRKRKRKRKRKKKRKKKKK 160
R ++++ +E+ ++ ++K+++++K++ ++++++++ +++ +R+R+R+R+R++KR+ ++
Sbjct: 36 RHRQRDRHRERDRQTDREKERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRE 95
Query: 161 K 161
+
Sbjct: 96 R 96
Score = 40.0 bits (92), Expect = 0.001
Identities = 9/60 (15%), Positives = 47/60 (78%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+ E ++++++E++ + +++ + +++ + +++ ++ ++K+R+R+++R R+R+++R+ +++
Sbjct: 16 ETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERETERE 75
Score = 39.7 bits (91), Expect = 0.001
Identities = 12/62 (19%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKK-RKRKRKRKRKRKKKRKKKK 159
QRE ++++E++++ +++ K + +++K++ + +++ +K R+R ++ +R+R ++R++++
Sbjct: 79 QRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQR 138
Query: 160 KK 161
++
Sbjct: 139 QR 140
Score = 38.1 bits (87), Expect = 0.004
Identities = 8/59 (13%), Positives = 47/59 (79%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
R ++ E+E++++++++ + +++ + +++ + +++ ++ R+++R+R+++R ++R+++++
Sbjct: 13 RGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERE 71
>gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1
[Homo sapiens]
Length = 759
Score = 60.5 bits (145), Expect = 7e-10
Identities = 28/68 (41%), Positives = 44/68 (64%)
Query: 94 LPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK 153
+ L + K ++ +EKKKKKK+KK K K + K +KKKKKK K K+K++ K K
Sbjct: 156 IALFNVNNSSNKDQEPEEKKKKKKEKKSKSDDKNENKNDPEKKKKKKDKEKKKKEEKSKD 215
Query: 154 KRKKKKKK 161
K++++KK+
Sbjct: 216 KKEEEKKE 223
Score = 55.8 bits (133), Expect = 2e-08
Identities = 27/64 (42%), Positives = 41/64 (64%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
Q E+K+K+K++KK K K + K +KKKKKK K+KKK++ K K K++ +KK
Sbjct: 169 QEPEEKKKKKKEKKSKSDDKNENKNDPEKKKKKKDKEKKKKEEKSKDKKEEEKKEVVVID 228
Query: 161 KTGN 164
+GN
Sbjct: 229 PSGN 232
Score = 52.0 bits (123), Expect = 2e-07
Identities = 23/55 (41%), Positives = 38/55 (69%)
Query: 111 EKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNE 165
++ ++KKKKKK+KK K K + K +KK+K+K K K+K+++K K KK++ E
Sbjct: 169 QEPEEKKKKKKEKKSKSDDKNENKNDPEKKKKKKDKEKKKKEEKSKDKKEEEKKE 223
Score = 50.1 bits (118), Expect = 9e-07
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 112 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGAKI 169
K ++ ++KKKKKK+KK K K + K K+K+K+ +++KKK +K K K E ++
Sbjct: 167 KDQEPEEKKKKKKEKKSKSDDKNENKNDPEKKKKKKDKEKKKKEEKSKDKKEEEKKEV 224
>gi|71143141 cyclic nucleotide gated channel alpha 1 isoform 2 [Homo
sapiens]
Length = 690
Score = 60.5 bits (145), Expect = 7e-10
Identities = 28/68 (41%), Positives = 44/68 (64%)
Query: 94 LPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK 153
+ L + K ++ +EKKKKKK+KK K K + K +KKKKKK K K+K++ K K
Sbjct: 87 IALFNVNNSSNKDQEPEEKKKKKKEKKSKSDDKNENKNDPEKKKKKKDKEKKKKEEKSKD 146
Query: 154 KRKKKKKK 161
K++++KK+
Sbjct: 147 KKEEEKKE 154
Score = 55.8 bits (133), Expect = 2e-08
Identities = 27/64 (42%), Positives = 41/64 (64%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
Q E+K+K+K++KK K K + K +KKKKKK K+KKK++ K K K++ +KK
Sbjct: 100 QEPEEKKKKKKEKKSKSDDKNENKNDPEKKKKKKDKEKKKKEEKSKDKKEEEKKEVVVID 159
Query: 161 KTGN 164
+GN
Sbjct: 160 PSGN 163
Score = 52.0 bits (123), Expect = 2e-07
Identities = 23/55 (41%), Positives = 38/55 (69%)
Query: 111 EKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNE 165
++ ++KKKKKK+KK K K + K +KK+K+K K K+K+++K K KK++ E
Sbjct: 100 QEPEEKKKKKKEKKSKSDDKNENKNDPEKKKKKKDKEKKKKEEKSKDKKEEEKKE 154
Score = 50.1 bits (118), Expect = 9e-07
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 112 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGAKI 169
K ++ ++KKKKKK+KK K K + K K+K+K+ +++KKK +K K K E ++
Sbjct: 98 KDQEPEEKKKKKKEKKSKSDDKNENKNDPEKKKKKKDKEKKKKEEKSKDKKEEEKKEV 155
>gi|168229156 NFKB activating protein [Homo sapiens]
Length = 415
Score = 59.7 bits (143), Expect = 1e-09
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 20/87 (22%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKK--------------------KKKKKKKKKK 140
+ E+KK+ + K++ KK++KKK K+K KK K++ KK KKK
Sbjct: 179 EEEKKKKSSRSKERSKKRRKKKSSKRKHKKYSEDSDSDSDSETDSSDEDNKRRAKKAKKK 238
Query: 141 RKRKRKRKRKRKKKRKKKKKKTGNEGA 167
K+K+ R +K KKKR KK +K ++ +
Sbjct: 239 EKKKKHRSKKYKKKRSKKSRKESSDSS 265
Score = 55.5 bits (132), Expect = 2e-08
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 20/85 (23%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKK--------------------KKKKKKKKKKKKKK 140
+++ + KE+ KK++KKK K+K KK K++ KK KKK+KKK
Sbjct: 183 KKKSSRSKERSKKRRKKKSSKRKHKKYSEDSDSDSDSETDSSDEDNKRRAKKAKKKEKKK 242
Query: 141 RKRKRKRKRKRKKKRKKKKKKTGNE 165
+ R +K K+KR KK +K+ + ++
Sbjct: 243 KHRSKKYKKKRSKKSRKESSDSSSK 267
Score = 49.3 bits (116), Expect = 2e-06
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 23/92 (25%)
Query: 93 HLPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKK-------------- 138
H P+ ++ +++KKKK + K++ KK++KKK K+K
Sbjct: 160 HTPVEDEEPKKSTTSASTSEEEKKKKSSRSKERSKKRRKKKSSKRKHKKYSEDSDSDSDS 219
Query: 139 ---------KKRKRKRKRKRKRKKKRKKKKKK 161
K+R +K K+K K+KK R KK KK
Sbjct: 220 ETDSSDEDNKRRAKKAKKKEKKKKHRSKKYKK 251
Score = 47.4 bits (111), Expect = 6e-06
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 19/80 (23%)
Query: 101 QREEKKEKEKEKKKKKKK-------------------KKKKKKKKKKKKKKKKKKKKKKR 141
+R +K+ K+K K+K KK K++ KK KKK+KKKK + KK +
Sbjct: 191 ERSKKRRKKKSSKRKHKKYSEDSDSDSDSETDSSDEDNKRRAKKAKKKEKKKKHRSKKYK 250
Query: 142 KRKRKRKRKRKKKRKKKKKK 161
K++ K+ RK K+ +
Sbjct: 251 KKRSKKSRKESSDSSSKESQ 270
Score = 46.2 bits (108), Expect = 1e-05
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 95 PLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKK 154
P + P +E E E+ KK +++KKKK + K++ KKR++K+ KRK KK
Sbjct: 150 PKNPEPDSDEHTPVEDEEPKKSTTSASTSEEEKKKKSSRSKERSKKRRKKKSSKRKHKKY 209
Query: 155 RKKKKKKTGNE 165
+ + +E
Sbjct: 210 SEDSDSDSDSE 220
Score = 46.2 bits (108), Expect = 1e-05
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK 157
+ + + E K++ KK KKK+KKKK + KK KKK+ K+ RK K+ +++
Sbjct: 218 DSETDSSDEDNKRRAKKAKKKEKKKKHRSKKYKKKRSKKSRKESSDSSSKESQEE 272
Score = 44.7 bits (104), Expect = 4e-05
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
E+ K + K+ KKK+KKKK + KK KKK+ KK +K+ K ++ + K + K
Sbjct: 226 EDNKRRAKKAKKKEKKKKHRSKKYKKKRSKKSRKESSDSSSKESQEEFLENPWKDRTK 283
Score = 43.5 bits (101), Expect = 9e-05
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTG 163
++ K + KK KKK+KKKK + KK KKK+ KK +K+ K ++ + K +
Sbjct: 225 DEDNKRRAKKAKKKEKKKKHRSKKYKKKRSKKSRKESSDSSSKESQEEFLENPWKDRTKA 284
Query: 164 NE 165
E
Sbjct: 285 EE 286
Score = 43.5 bits (101), Expect = 9e-05
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 101 QREEKKEKEKEKKKKKKKKK-KKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
+R KK K+KEKKKK + KK KKK+ KK +K+ K+ ++ + K + K ++
Sbjct: 229 KRRAKKAKKKEKKKKHRSKKYKKKRSKKSRKESSDSSSKESQEEFLENPWKDRTKAEEPS 288
Query: 160 KKTGNEGAK 168
G E K
Sbjct: 289 DLIGPEAPK 297
Score = 42.0 bits (97), Expect = 3e-04
Identities = 17/62 (27%), Positives = 35/62 (56%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK 157
GL + + + ++ + ++ KK +++KKKK + ++R +KR++K+ KRK
Sbjct: 147 GLSPKNPEPDSDEHTPVEDEEPKKSTTSASTSEEEKKKKSSRSKERSKKRRKKKSSKRKH 206
Query: 158 KK 159
KK
Sbjct: 207 KK 208
Score = 41.2 bits (95), Expect = 4e-04
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
+E ++ +K KKK+KKKK + KK KKK+ KK +K+ ++ + + + K + K
Sbjct: 225 DEDNKRRAKKAKKKEKKKKHRSKKYKKKRSKKSRKESSDSSSKESQEEFLENPWKDRTK 283
Score = 33.1 bits (74), Expect = 0.12
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK 157
G P+ K E + + ++ KK +++KK+K R ++R +K+++KK
Sbjct: 141 GAPEVWGLSPKNPEPDSDEHTPVEDEEPKKSTTSASTSEEEKKKKSSRSKERSKKRRKKK 200
Query: 158 KKKK 161
K+
Sbjct: 201 SSKR 204
Score = 28.5 bits (62), Expect = 2.9
Identities = 20/118 (16%), Positives = 48/118 (40%), Gaps = 32/118 (27%)
Query: 83 IAFCDAGPSLHLPLHGLPQREEKK-----EKEKEKKKKKKKKKKKKK------------- 124
I F A S++ + P +K +KE+E+ ++K+ ++++
Sbjct: 90 IPFASASSSVYYGSYSRPYGSDKPWPSLLDKEREESLRQKRLSERERIGELGAPEVWGLS 149
Query: 125 --------------KKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGAK 168
+ ++ KK + ++K+K R +++ +K++KKK+ K
Sbjct: 150 PKNPEPDSDEHTPVEDEEPKKSTTSASTSEEEKKKKSSRSKERSKKRRKKKSSKRKHK 207
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 58.2 bits (139), Expect = 3e-09
Identities = 24/68 (35%), Positives = 52/68 (76%), Gaps = 5/68 (7%)
Query: 101 QREEKKEKEKEKKKKKKKKK-----KKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKR 155
QRE +E E+E +++++++ K++ +++ +K+++KK++KK+RK++RK K+K +K+R
Sbjct: 218 QRETDREGERETDRRRERQRDRDRGKERDRERDRKEERKKERKKERKKERKEKKKEEKRR 277
Query: 156 KKKKKKTG 163
+ KK+K G
Sbjct: 278 EDKKRKWG 285
Score = 53.5 bits (127), Expect = 8e-08
Identities = 17/59 (28%), Positives = 48/59 (81%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
G + + ++E+++++ + K++ +++ +K+++KK++KK++KK+++++K++ KR+ KKRK
Sbjct: 225 GERETDRRRERQRDRDRGKERDRERDRKEERKKERKKERKKERKEKKKEEKRREDKKRK 283
Score = 48.5 bits (114), Expect = 3e-06
Identities = 20/75 (26%), Positives = 51/75 (68%), Gaps = 7/75 (9%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKK-------KKKKKKKKKKKKKKRKRKRKRKRKRKK 153
+RE + ++E+++++K + +++++ + +++++++ + + K+R R+R RK +RKK
Sbjct: 198 ERERQTDRERDRQRKTQTERQRETDREGERETDRRRERQRDRDRGKERDRERDRKEERKK 257
Query: 154 KRKKKKKKTGNEGAK 168
+RKK++KK E K
Sbjct: 258 ERKKERKKERKEKKK 272
Score = 48.5 bits (114), Expect = 3e-06
Identities = 18/61 (29%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
Q E ++E ++E +++ +++++++ + + K++ +++ +K+ +RK++RK++RKK+RK+KKK
Sbjct: 214 QTERQRETDREGERETDRRRERQRDRDRGKERDRERDRKE-ERKKERKKERKKERKEKKK 272
Query: 161 K 161
+
Sbjct: 273 E 273
Score = 47.4 bits (111), Expect = 6e-06
Identities = 16/60 (26%), Positives = 46/60 (76%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
R+ K+++E+ +K+K+ + + ++K+ + ++ ++++K+K R+R+R R R+R++ R ++K++
Sbjct: 94 RDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQKGRERERDRGRERERDRDREKER 153
Score = 44.7 bits (104), Expect = 4e-05
Identities = 14/58 (24%), Positives = 45/58 (77%)
Query: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
EK EKE+++ +K+ +++++K+K+ + + ++K+ + +R R+R++++ R+++R + +++
Sbjct: 86 EKTEKERDRDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQKGRERERDRGRER 143
Score = 44.3 bits (103), Expect = 5e-05
Identities = 13/61 (21%), Positives = 47/61 (77%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+R+ +++++E+++K+K+ + + ++K+ + ++ ++++K++ R+R+R R R+++R + ++
Sbjct: 91 ERDRDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQKGRERERDRGRERERDRDRE 150
Query: 161 K 161
K
Sbjct: 151 K 151
Score = 43.5 bits (101), Expect = 9e-05
Identities = 17/59 (28%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 104 EKKEKEKEKKKKKKKKKKKK-KKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
E++ KEKE + + ++K+ + ++ ++++K+K +++++ R R+R+R R R+K+R+++ +K
Sbjct: 101 ERRRKEKETNRNRDREKQTEIERDREREKQKGRERERDRGRERERDRDREKERERQTEK 159
Score = 43.1 bits (100), Expect = 1e-04
Identities = 14/65 (21%), Positives = 43/65 (66%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
QRE + +EK +K++ + +K+ +++++K+K+ + + ++K+ + + + K+K +++++
Sbjct: 78 QRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQKGRERER 137
Query: 161 KTGNE 165
G E
Sbjct: 138 DRGRE 142
Score = 41.6 bits (96), Expect = 3e-04
Identities = 15/66 (22%), Positives = 48/66 (72%), Gaps = 5/66 (7%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKK-----KKKKKKKKKKKRKRKRKRKRKRKKKR 155
QR+ +KE+E++ +++ +++K + +++++ +++ ++++++R R R ++R R++ R
Sbjct: 192 QRDTEKERERQTDRERDRQRKTQTERQRETDREGERETDRRRERQRDRDRGKERDRERDR 251
Query: 156 KKKKKK 161
K+++KK
Sbjct: 252 KEERKK 257
Score = 41.2 bits (95), Expect = 4e-04
Identities = 15/63 (23%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
QRE + E+E++ ++++K+K+++ ++ + +++ +K+++++ R+R R+RK + +R+++
Sbjct: 164 QRETETERERD-REREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETD 222
Query: 161 KTG 163
+ G
Sbjct: 223 REG 225
Score = 40.0 bits (92), Expect = 0.001
Identities = 16/76 (21%), Positives = 53/76 (69%), Gaps = 8/76 (10%)
Query: 101 QREEKKEKEKE-------KKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK 153
+RE + EK+++ ++++ ++++K+K+++ ++ + +++ +K+R+R+ R+R R++
Sbjct: 152 ERERQTEKDRDGQRETETERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQR 211
Query: 154 K-RKKKKKKTGNEGAK 168
K + +++++T EG +
Sbjct: 212 KTQTERQRETDREGER 227
Score = 39.7 bits (91), Expect = 0.001
Identities = 14/64 (21%), Positives = 49/64 (76%), Gaps = 3/64 (4%)
Query: 101 QREEKKEKEKEKKKKKKKKK---KKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK 157
Q E ++++E+EK+K +++++ +++++ + ++K+++++ +K R +R+ + +R++ R++
Sbjct: 118 QTEIERDREREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERDRER 177
Query: 158 KKKK 161
+K+K
Sbjct: 178 EKQK 181
Score = 39.7 bits (91), Expect = 0.001
Identities = 14/61 (22%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Query: 101 QREEKKEKEKEKKKKKKKKK---KKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK 157
+RE +++EKE++++ +K + ++ + ++++ ++++K+K+++ +R R R+R +K+R++
Sbjct: 142 ERERDRDREKERERQTEKDRDGQRETETERERDREREKQKERETERDRDRQRDTEKERER 201
Query: 158 K 158
+
Sbjct: 202 Q 202
Score = 39.3 bits (90), Expect = 0.002
Identities = 13/64 (20%), Positives = 49/64 (76%), Gaps = 3/64 (4%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKK---KKKKRKRKRKRKRKRKKKRKK 157
+RE++K +E+E+ + +++++ + ++K+++++ +K + ++ + +R+R R+R+++K+R+
Sbjct: 126 EREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERDREREKQKERET 185
Query: 158 KKKK 161
++ +
Sbjct: 186 ERDR 189
Score = 38.1 bits (87), Expect = 0.004
Identities = 12/57 (21%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Query: 104 EKKEKEKEK-KKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
+ +++E+++ ++K +K++ + +K+ +++++K+K+ + R R+++ + +R ++R+K+K
Sbjct: 75 DDRQRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQK 131
Score = 38.1 bits (87), Expect = 0.004
Identities = 10/59 (16%), Positives = 42/59 (71%)
Query: 107 EKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNE 165
++++E+ + ++K +K++ + +K+ +++++K+K+ + + + K+ ++ ++++K+ G E
Sbjct: 76 DRQRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQKGRE 134
Score = 38.1 bits (87), Expect = 0.004
Identities = 14/63 (22%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+R ++KE + + ++K+ + ++ ++++K+K +++++ + R+R+R R R+++++R+ +K
Sbjct: 102 RRRKEKETNR-NRDREKQTEIERDREREKQKGRERERDRGRERERDRDREKERERQTEKD 160
Query: 161 KTG 163
+ G
Sbjct: 161 RDG 163
Score = 37.4 bits (85), Expect = 0.006
Identities = 14/69 (20%), Positives = 49/69 (71%), Gaps = 9/69 (13%)
Query: 102 REEKKEKEKEKKKKKKK---------KKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRK 152
RE++ E E++++++K+K +++++ + ++K+++++ +K + +R+ + +R+R
Sbjct: 115 REKQTEIERDREREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERD 174
Query: 153 KKRKKKKKK 161
++R+K+K++
Sbjct: 175 REREKQKER 183
Score = 35.8 bits (81), Expect = 0.018
Identities = 11/61 (18%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 101 QREEKKEKEKEKKKK-KKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
++E + +++EK+ + ++ ++++K+K +++++ + +++++ R R+++R+R+ +K R ++
Sbjct: 106 EKETNRNRDREKQTEIERDREREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQR 165
Query: 160 K 160
+
Sbjct: 166 E 166
Score = 32.3 bits (72), Expect = 0.20
Identities = 8/65 (12%), Positives = 42/65 (64%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+ +++EK+ + ++ ++++K+K +++++ + +++++ + + K + ++ K + +++
Sbjct: 108 ETNRNRDREKQTEIERDREREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRET 167
Query: 161 KTGNE 165
+T E
Sbjct: 168 ETERE 172
Score = 31.2 bits (69), Expect = 0.45
Identities = 11/41 (26%), Positives = 28/41 (68%)
Query: 128 KKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGAK 168
+++++ + ++K +++R R RKR R+++RK+K+ + K
Sbjct: 77 RQRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDREK 117
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
Length = 1758
Score = 58.2 bits (139), Expect = 3e-09
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTG 163
E ++ +K+KKKK+KKK KK KK KK KK + + ++ +K K K+K+ KK K K+K+
Sbjct: 1688 ESQDSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKSQKHKHKKKKSKKNKDKEKEKE 1747
Query: 164 NEGAKI 169
+ K+
Sbjct: 1748 KDDQKV 1753
Score = 57.8 bits (138), Expect = 4e-09
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 93 HLPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKK---------KKRKR 143
H P + E + KKKKKKK+KKK KK KK KK KK K +K
Sbjct: 1670 HSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKSQKH 1729
Query: 144 KRKRKRKRKKKRKKKKKKTGNEGAK 168
K K+K+ +K K K+K+K+ ++ K
Sbjct: 1730 KHKKKKSKKNKDKEKEKEKDDQKVK 1754
Score = 52.4 bits (124), Expect = 2e-07
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 20/113 (17%)
Query: 51 LSTHSTHSDPSATVLPGSSTHRLKGKIF--HLISIAFCDAGPSLHLPLHGLPQREEKKEK 108
+S + +HS PS + S +H G H S + ++ S ++++KKEK
Sbjct: 1653 ISRNQSHSSPSVSP---SRSHSPSGSQTRSHSSSASSAESQDS--------KKKKKKKEK 1701
Query: 109 EKEKKKKKKKKKKKK-------KKKKKKKKKKKKKKKKKRKRKRKRKRKRKKK 154
+K KK KK KK KK +K +K K KKKK KK K K K K K +K K
Sbjct: 1702 KKHKKHKKHKKHKKHAGTEVELEKSQKHKHKKKKSKKNKDKEKEKEKDDQKVK 1754
Score = 42.0 bits (97), Expect = 3e-04
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 98 GLPQREEKKE-KEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
G P++ K KE ++ K K++K KK K K +K K++K K+ ++ + K +
Sbjct: 1052 GTPRKAHSKSAKEHQETKPVKEEKVKKDYSKDVKSEKLTTKEEKAKKPNEKNKPLDNKGE 1111
Query: 157 KKKKKTGNEG 166
K+K+KT +G
Sbjct: 1112 KRKRKTEEKG 1121
Score = 32.0 bits (71), Expect = 0.26
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 104 EKKEKEKEKKKKKKKKKKKKK-----KKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
EK ++E++K K K K K+K KK+ K K ++K +R+R + + KK
Sbjct: 969 EKDKRERDKPKAKGDKTKRKNDGSAVSKKENIVKPAKGPQEKVDGERERSPRSEPPIKKA 1028
Query: 159 KKKT 162
K++T
Sbjct: 1029 KEET 1032
Score = 32.0 bits (71), Expect = 0.26
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 103 EEKKEKEKEKKKKKKKKKKK------KKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
++K+E++K K K K K+K KK+ K K ++K + + R KK K
Sbjct: 970 KDKRERDKPKAKGDKTKRKNDGSAVSKKENIVKPAKGPQEKVDGERERSPRSEPPIKKAK 1029
Query: 157 KKKKKTGN 164
++ KT N
Sbjct: 1030 EETPKTDN 1037
Score = 32.0 bits (71), Expect = 0.26
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
L +EEK +K EK K K +K+K+K ++K K + K + + K K+
Sbjct: 1089 LTTKEEKAKKPNEKNKPLDNKGEKRKRKTEEKGVDKDFESSSMKISKLEVTEIVKPSPKR 1148
Query: 159 KKKTGNE 165
K + E
Sbjct: 1149 KMEPDTE 1155
Score = 29.6 bits (65), Expect = 1.3
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 9/73 (12%)
Query: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKK---------KKKKKKKRKRKRKRKRKRKKK 154
EK ++ EK K KK K ++ KK K+ +K + + ++ K K
Sbjct: 1155 EKMDRTPEKDKISLSAPAKKIKLNRETGKKIGSTENISNTKEPSEKLESTSSKVKQEKVK 1214
Query: 155 RKKKKKKTGNEGA 167
K ++K TG EG+
Sbjct: 1215 GKVRRKVTGTEGS 1227
Score = 28.9 bits (63), Expect = 2.2
Identities = 19/67 (28%), Positives = 27/67 (40%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
LP R++ E + K +K K+++ K K K K KRK KK+ K
Sbjct: 943 LPSRDDATPVRDEPMDAESITFKSVSEKDKRERDKPKAKGDKTKRKNDGSAVSKKENIVK 1002
Query: 159 KKKTGNE 165
K E
Sbjct: 1003 PAKGPQE 1009
Score = 28.5 bits (62), Expect = 2.9
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKR---KRKRKKKRK 156
P++ ++ +K K K+K+ + K K KK +K+RK + + + +
Sbjct: 865 PEKLSARDGHNQKDNTKSKEKESENAPGDGKGNKHKKHRKRRKGEESEGFLNPELLETSR 924
Query: 157 KKKKKTGNEGAK 168
K ++ TG E K
Sbjct: 925 KSREPTGVEENK 936
Score = 27.7 bits (60), Expect = 5.0
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
P R+E + E K +K K+++ K K K K K+K +K + K ++K
Sbjct: 951 PVRDEPMDAESITFKSVSEKDKRERDKPKAKGDKTKRKNDGSAVSKKENIVKPAKGPQEK 1010
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
Length = 1792
Score = 58.2 bits (139), Expect = 3e-09
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTG 163
E ++ +K+KKKK+KKK KK KK KK KK + + ++ +K K K+K+ KK K K+K+
Sbjct: 1722 ESQDSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKSQKHKHKKKKSKKNKDKEKEKE 1781
Query: 164 NEGAKI 169
+ K+
Sbjct: 1782 KDDQKV 1787
Score = 57.8 bits (138), Expect = 4e-09
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 93 HLPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKK---------KKRKR 143
H P + E + KKKKKKK+KKK KK KK KK KK K +K
Sbjct: 1704 HSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKSQKH 1763
Query: 144 KRKRKRKRKKKRKKKKKKTGNEGAK 168
K K+K+ +K K K+K+K+ ++ K
Sbjct: 1764 KHKKKKSKKNKDKEKEKEKDDQKVK 1788
Score = 52.4 bits (124), Expect = 2e-07
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 20/113 (17%)
Query: 51 LSTHSTHSDPSATVLPGSSTHRLKGKIF--HLISIAFCDAGPSLHLPLHGLPQREEKKEK 108
+S + +HS PS + S +H G H S + ++ S ++++KKEK
Sbjct: 1687 ISRNQSHSSPSVSP---SRSHSPSGSQTRSHSSSASSAESQDS--------KKKKKKKEK 1735
Query: 109 EKEKKKKKKKKKKKK-------KKKKKKKKKKKKKKKKKRKRKRKRKRKRKKK 154
+K KK KK KK KK +K +K K KKKK KK K K K K K +K K
Sbjct: 1736 KKHKKHKKHKKHKKHAGTEVELEKSQKHKHKKKKSKKNKDKEKEKEKDDQKVK 1788
Score = 42.0 bits (97), Expect = 3e-04
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 98 GLPQREEKKE-KEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
G P++ K KE ++ K K++K KK K K +K K++K K+ ++ + K +
Sbjct: 1086 GTPRKAHSKSAKEHQETKPVKEEKVKKDYSKDVKSEKLTTKEEKAKKPNEKNKPLDNKGE 1145
Query: 157 KKKKKTGNEG 166
K+K+KT +G
Sbjct: 1146 KRKRKTEEKG 1155
Score = 32.0 bits (71), Expect = 0.26
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 104 EKKEKEKEKKKKKKKKKKKKK-----KKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
EK ++E++K K K K K+K KK+ K K ++K +R+R + + KK
Sbjct: 1003 EKDKRERDKPKAKGDKTKRKNDGSAVSKKENIVKPAKGPQEKVDGERERSPRSEPPIKKA 1062
Query: 159 KKKT 162
K++T
Sbjct: 1063 KEET 1066
Score = 32.0 bits (71), Expect = 0.26
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 103 EEKKEKEKEKKKKKKKKKKK------KKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
++K+E++K K K K K+K KK+ K K ++K + + R KK K
Sbjct: 1004 KDKRERDKPKAKGDKTKRKNDGSAVSKKENIVKPAKGPQEKVDGERERSPRSEPPIKKAK 1063
Query: 157 KKKKKTGN 164
++ KT N
Sbjct: 1064 EETPKTDN 1071
Score = 32.0 bits (71), Expect = 0.26
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
L +EEK +K EK K K +K+K+K ++K K + K + + K K+
Sbjct: 1123 LTTKEEKAKKPNEKNKPLDNKGEKRKRKTEEKGVDKDFESSSMKISKLEVTEIVKPSPKR 1182
Query: 159 KKKTGNE 165
K + E
Sbjct: 1183 KMEPDTE 1189
Score = 29.6 bits (65), Expect = 1.3
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 9/73 (12%)
Query: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKK---------KKKKKKKRKRKRKRKRKRKKK 154
EK ++ EK K KK K ++ KK K+ +K + + ++ K K
Sbjct: 1189 EKMDRTPEKDKISLSAPAKKIKLNRETGKKIGSTENISNTKEPSEKLESTSSKVKQEKVK 1248
Query: 155 RKKKKKKTGNEGA 167
K ++K TG EG+
Sbjct: 1249 GKVRRKVTGTEGS 1261
Score = 28.9 bits (63), Expect = 2.2
Identities = 19/67 (28%), Positives = 27/67 (40%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
LP R++ E + K +K K+++ K K K K KRK KK+ K
Sbjct: 977 LPSRDDATPVRDEPMDAESITFKSVSEKDKRERDKPKAKGDKTKRKNDGSAVSKKENIVK 1036
Query: 159 KKKTGNE 165
K E
Sbjct: 1037 PAKGPQE 1043
Score = 28.5 bits (62), Expect = 2.9
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKR---KRKRKKKRK 156
P++ ++ +K K K+K+ + K K KK +K+RK + + + +
Sbjct: 899 PEKLSARDGHNQKDNTKSKEKESENAPGDGKGNKHKKHRKRRKGEESEGFLNPELLETSR 958
Query: 157 KKKKKTGNEGAK 168
K ++ TG E K
Sbjct: 959 KSREPTGVEENK 970
Score = 28.1 bits (61), Expect = 3.8
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRK 146
RE+++ KE+EKKK K + K+ + KK +K++++ + K
Sbjct: 643 REQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRRSFSRSK 687
Score = 27.7 bits (60), Expect = 5.0
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
P R+E + E K +K K+++ K K K K K+K +K + K ++K
Sbjct: 985 PVRDEPMDAESITFKSVSEKDKRERDKPKAKGDKTKRKNDGSAVSKKENIVKPAKGPQEK 1044
Score = 27.3 bits (59), Expect = 6.5
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKR 151
REE +++ K+++KKK K + K+ + KK +++R+R R +
Sbjct: 638 REEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRRSFSRSK 687
Score = 26.9 bits (58), Expect = 8.5
Identities = 14/60 (23%), Positives = 31/60 (51%)
Query: 94 LPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK 153
+P P ++ ++++ K+++KKK K + K+ + KK +++R+R R K
Sbjct: 628 IPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRRSFSRSK 687
>gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo
sapiens]
Length = 1150
Score = 56.6 bits (135), Expect = 1e-08
Identities = 26/72 (36%), Positives = 48/72 (66%)
Query: 87 DAGPSLHLPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRK 146
D G ++ L LP++E+KKEK+K+ KK ++K KK+++ + + K K++K K K++
Sbjct: 781 DFGVRIYKSLLSLPEKEDKKEKDKKSKKDERKDKKEERDDETDEPKPKRRKSGDDKDKKE 840
Query: 147 RKRKRKKKRKKK 158
+ +RKK+ K+K
Sbjct: 841 DRDERKKEDKRK 852
Score = 37.0 bits (84), Expect = 0.008
Identities = 13/48 (27%), Positives = 36/48 (75%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRK 150
EE+KE++KE +K +K++ + +K + K+++++K+++ +++R+R+
Sbjct: 673 EEQKEEQKELEKSEKEEDEDDDRKSEDDKEEEERKRQEEIERQRRERR 720
Score = 37.0 bits (84), Expect = 0.008
Identities = 13/46 (28%), Positives = 36/46 (78%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRK 146
Q+EE+KE EK +K++ + +K + K+++++K++++ ++++R+R+
Sbjct: 675 QKEEQKELEKSEKEEDEDDDRKSEDDKEEEERKRQEEIERQRRERR 720
Score = 35.8 bits (81), Expect = 0.018
Identities = 13/53 (24%), Positives = 40/53 (75%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKR 155
++ K +E+++++K+ +K +K++ + +K + K++++RKR+ + +R+R+++R
Sbjct: 668 KQLKVEEQKEEQKELEKSEKEEDEDDDRKSEDDKEEEERKRQEEIERQRRERR 720
Score = 35.4 bits (80), Expect = 0.024
Identities = 14/56 (25%), Positives = 39/56 (69%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK 157
R K+ K +E+K+++K+ +K +K++ + +K + K++ +RKR+ + +R+++ ++
Sbjct: 665 RLTKQLKVEEQKEEQKELEKSEKEEDEDDDRKSEDDKEEEERKRQEEIERQRRERR 720
Score = 34.7 bits (78), Expect = 0.041
Identities = 7/47 (14%), Positives = 35/47 (74%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKR 145
+P R++ + +E+E+++++ +++ ++K+ +++ ++++++ R+ +R
Sbjct: 311 VPNRKDDRSRERERERRRSRERSPQRKRSRERSPRRERERSPRRVRR 357
Score = 33.5 bits (75), Expect = 0.091
Identities = 12/55 (21%), Positives = 40/55 (72%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK 153
L ++ + +E+++E+K+ +K +K++ + +K + K+++++KR+ + +R+R+ ++
Sbjct: 666 LTKQLKVEEQKEEQKELEKSEKEEDEDDDRKSEDDKEEEERKRQEEIERQRRERR 720
Score = 33.1 bits (74), Expect = 0.12
Identities = 8/54 (14%), Positives = 36/54 (66%)
Query: 105 KKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
+ ++ + +K + +++++++++ +++ ++K+ R+R +R+R+R +R ++
Sbjct: 304 RNDRGDQVPNRKDDRSRERERERRRSRERSPQRKRSRERSPRRERERSPRRVRR 357
Score = 31.6 bits (70), Expect = 0.34
Identities = 8/41 (19%), Positives = 30/41 (73%)
Query: 119 KKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
+K + +++++++++ +++ +RKR R+R +R+++R ++
Sbjct: 314 RKDDRSRERERERRRSRERSPQRKRSRERSPRRERERSPRR 354
Score = 30.8 bits (68), Expect = 0.59
Identities = 7/44 (15%), Positives = 32/44 (72%)
Query: 117 KKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+K + +++++++++ +++ ++KR R+R +R+R++ ++ ++
Sbjct: 314 RKDDRSRERERERRRSRERSPQRKRSRERSPRRERERSPRRVRR 357
Score = 30.4 bits (67), Expect = 0.77
Identities = 11/70 (15%), Positives = 38/70 (54%)
Query: 92 LHLPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKR 151
L P+ + Q + + + + + + + +K + ++++++++R R+R +RKR
Sbjct: 279 LQPPVRIVSQPQPARRLDPPSRFSGRNDRGDQVPNRKDDRSRERERERRRSRERSPQRKR 338
Query: 152 KKKRKKKKKK 161
++R ++++
Sbjct: 339 SRERSPRRER 348
Score = 30.0 bits (66), Expect = 1.0
Identities = 9/63 (14%), Positives = 36/63 (57%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
PQ + + + + + +K + +++++++++ R+R +RKR R++ ++++
Sbjct: 289 PQPARRLDPPSRFSGRNDRGDQVPNRKDDRSRERERERRRSRERSPQRKRSRERSPRRER 348
Query: 160 KKT 162
+++
Sbjct: 349 ERS 351
Score = 30.0 bits (66), Expect = 1.0
Identities = 7/41 (17%), Positives = 30/41 (73%)
Query: 121 KKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
+K + +++++++++ +++ +RKR R+R +++R++ ++
Sbjct: 314 RKDDRSRERERERRRSRERSPQRKRSRERSPRRERERSPRR 354
>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
[Homo sapiens]
Length = 1412
Score = 56.6 bits (135), Expect = 1e-08
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 111 EKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNE 165
++ K KK+KKK K+KK K+KK+KKKK +K K +K+KKKKKKT +
Sbjct: 1356 DQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTAEQ 1410
Score = 56.2 bits (134), Expect = 1e-08
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
E ++ K KK+KKK K+KK K+KK+KKKK KK K +K+KKK+KK ++T
Sbjct: 1353 EGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTAEQT 1411
Score = 52.0 bits (123), Expect = 2e-07
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 96 LHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRK 150
+ G Q K +KEK+K K+KK K+KK+KKKK KK K + ++K+K+K+K
Sbjct: 1352 VEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKK 1406
Score = 52.0 bits (123), Expect = 2e-07
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK 153
++ K K++KKK K+KK K+KK+KKKK KK K +K+K+K+KK
Sbjct: 1356 DQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKK 1406
Score = 50.4 bits (119), Expect = 7e-07
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
G+ E + + KK+KKK K+KK K+KK+KKKK KK + + ++K+KKK+K
Sbjct: 1348 GMGTVEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKK 1406
Score = 38.1 bits (87), Expect = 0.004
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKK------------KKKKKKKRKRKR 145
G +R++ KEKK K + K + +++ +K K KK+K+K +
Sbjct: 1312 GKAKRDKASGDVKEKKGKGSLGSQGAKDEPEEELQKGMGTVEGGDQSNPKSKKEKKKSDK 1371
Query: 146 KRKRKRKKKRKKKKKKTGNEGAK 168
++K K KK++KKK KK + ++
Sbjct: 1372 RKKDKEKKEKKKKAKKASTKDSE 1394
Score = 30.8 bits (68), Expect = 0.59
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK---K 154
G R+ K ++ + + KKKKK + + +K K K KR + K
Sbjct: 1265 GWESRKRKLSGDQPAARTPRSKKKKKLGAGEGGEASVSPEKTSTTSKGKAKRDKASGDVK 1324
Query: 155 RKKKKKKTGNEGAK 168
KK K G++GAK
Sbjct: 1325 EKKGKGSLGSQGAK 1338
Score = 29.3 bits (64), Expect = 1.7
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 118 KKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGAK 168
++++KK K+ +K + +KRK + R + KKKKK EG +
Sbjct: 1248 EQERKKVVDTTKESSRKGWESRKRKLSGDQPAARTPRSKKKKKLGAGEGGE 1298
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 56.6 bits (135), Expect = 1e-08
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 111 EKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNE 165
++ K KK+KKK K+KK K+KK+KKKK +K K +K+KKKKKKT +
Sbjct: 1395 DQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTAEQ 1449
Score = 56.2 bits (134), Expect = 1e-08
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
E ++ K KK+KKK K+KK K+KK+KKKK KK K +K+KKK+KK ++T
Sbjct: 1392 EGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTAEQT 1450
Score = 52.0 bits (123), Expect = 2e-07
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 96 LHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRK 150
+ G Q K +KEK+K K+KK K+KK+KKKK KK K + ++K+K+K+K
Sbjct: 1391 VEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKK 1445
Score = 52.0 bits (123), Expect = 2e-07
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK 153
++ K K++KKK K+KK K+KK+KKKK KK K +K+K+K+KK
Sbjct: 1395 DQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKK 1445
Score = 50.4 bits (119), Expect = 7e-07
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
G+ E + + KK+KKK K+KK K+KK+KKKK KK + + ++K+KKK+K
Sbjct: 1387 GMGTVEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKK 1445
Score = 38.1 bits (87), Expect = 0.004
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKK------------KKKKKKKRKRKR 145
G +R++ KEKK K + K + +++ +K K KK+K+K +
Sbjct: 1351 GKAKRDKASGDVKEKKGKGSLGSQGAKDEPEEELQKGMGTVEGGDQSNPKSKKEKKKSDK 1410
Query: 146 KRKRKRKKKRKKKKKKTGNEGAK 168
++K K KK++KKK KK + ++
Sbjct: 1411 RKKDKEKKEKKKKAKKASTKDSE 1433
Score = 30.8 bits (68), Expect = 0.59
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK---K 154
G R+ K ++ + + KKKKK + + +K K K KR + K
Sbjct: 1304 GWESRKRKLSGDQPAARTPRSKKKKKLGAGEGGEASVSPEKTSTTSKGKAKRDKASGDVK 1363
Query: 155 RKKKKKKTGNEGAK 168
KK K G++GAK
Sbjct: 1364 EKKGKGSLGSQGAK 1377
Score = 29.3 bits (64), Expect = 1.7
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 118 KKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGAK 168
++++KK K+ +K + +KRK + R + KKKKK EG +
Sbjct: 1287 EQERKKVVDTTKESSRKGWESRKRKLSGDQPAARTPRSKKKKKLGAGEGGE 1337
>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
[Homo sapiens]
Length = 1488
Score = 56.6 bits (135), Expect = 1e-08
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 111 EKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNE 165
++ K KK+KKK K+KK K+KK+KKKK +K K +K+KKKKKKT +
Sbjct: 1432 DQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTAEQ 1486
Score = 56.2 bits (134), Expect = 1e-08
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
E ++ K KK+KKK K+KK K+KK+KKKK KK K +K+KKK+KK ++T
Sbjct: 1429 EGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTAEQT 1487
Score = 52.0 bits (123), Expect = 2e-07
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 96 LHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRK 150
+ G Q K +KEK+K K+KK K+KK+KKKK KK K + ++K+K+K+K
Sbjct: 1428 VEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKK 1482
Score = 52.0 bits (123), Expect = 2e-07
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK 153
++ K K++KKK K+KK K+KK+KKKK KK K +K+K+K+KK
Sbjct: 1432 DQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKK 1482
Score = 50.4 bits (119), Expect = 7e-07
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
G+ E + + KK+KKK K+KK K+KK+KKKK KK + + ++K+KKK+K
Sbjct: 1424 GMGTVEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKK 1482
Score = 38.1 bits (87), Expect = 0.004
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKK------------KKKKKKKRKRKR 145
G +R++ KEKK K + K + +++ +K K KK+K+K +
Sbjct: 1388 GKAKRDKASGDVKEKKGKGSLGSQGAKDEPEEELQKGMGTVEGGDQSNPKSKKEKKKSDK 1447
Query: 146 KRKRKRKKKRKKKKKKTGNEGAK 168
++K K KK++KKK KK + ++
Sbjct: 1448 RKKDKEKKEKKKKAKKASTKDSE 1470
Score = 30.8 bits (68), Expect = 0.59
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK---K 154
G R+ K ++ + + KKKKK + + +K K K KR + K
Sbjct: 1341 GWESRKRKLSGDQPAARTPRSKKKKKLGAGEGGEASVSPEKTSTTSKGKAKRDKASGDVK 1400
Query: 155 RKKKKKKTGNEGAK 168
KK K G++GAK
Sbjct: 1401 EKKGKGSLGSQGAK 1414
Score = 29.3 bits (64), Expect = 1.7
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 118 KKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGAK 168
++++KK K+ +K + +KRK + R + KKKKK EG +
Sbjct: 1324 EQERKKVVDTTKESSRKGWESRKRKLSGDQPAARTPRSKKKKKLGAGEGGE 1374
>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b [Homo
sapiens]
Length = 1411
Score = 56.6 bits (135), Expect = 1e-08
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 111 EKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNE 165
++ K KK+KKK K+KK K+KK+KKKK +K K +K+KKKKKKT +
Sbjct: 1355 DQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTAEQ 1409
Score = 56.2 bits (134), Expect = 1e-08
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
E ++ K KK+KKK K+KK K+KK+KKKK KK K +K+KKK+KK ++T
Sbjct: 1352 EGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTAEQT 1410
Score = 52.0 bits (123), Expect = 2e-07
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 96 LHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRK 150
+ G Q K +KEK+K K+KK K+KK+KKKK KK K + ++K+K+K+K
Sbjct: 1351 VEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKK 1405
Score = 52.0 bits (123), Expect = 2e-07
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK 153
++ K K++KKK K+KK K+KK+KKKK KK K +K+K+K+KK
Sbjct: 1355 DQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKK 1405
Score = 50.4 bits (119), Expect = 7e-07
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
G+ E + + KK+KKK K+KK K+KK+KKKK KK + + ++K+KKK+K
Sbjct: 1347 GMGTVEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKK 1405
Score = 38.1 bits (87), Expect = 0.004
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKK------------KKKKKKKRKRKR 145
G +R++ KEKK K + K + +++ +K K KK+K+K +
Sbjct: 1311 GKAKRDKASGDVKEKKGKGSLGSQGAKDEPEEELQKGMGTVEGGDQSNPKSKKEKKKSDK 1370
Query: 146 KRKRKRKKKRKKKKKKTGNEGAK 168
++K K KK++KKK KK + ++
Sbjct: 1371 RKKDKEKKEKKKKAKKASTKDSE 1393
Score = 30.8 bits (68), Expect = 0.59
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK---K 154
G R+ K ++ + + KKKKK + + +K K K KR + K
Sbjct: 1264 GWESRKRKLSGDQPAARTPRSKKKKKLGAGEGGEASVSPEKTSTTSKGKAKRDKASGDVK 1323
Query: 155 RKKKKKKTGNEGAK 168
KK K G++GAK
Sbjct: 1324 EKKGKGSLGSQGAK 1337
Score = 29.3 bits (64), Expect = 1.7
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 118 KKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGAK 168
++++KK K+ +K + +KRK + R + KKKKK EG +
Sbjct: 1247 EQERKKVVDTTKESSRKGWESRKRKLSGDQPAARTPRSKKKKKLGAGEGGE 1297
>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a [Homo
sapiens]
Length = 1450
Score = 56.6 bits (135), Expect = 1e-08
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 111 EKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNE 165
++ K KK+KKK K+KK K+KK+KKKK +K K +K+KKKKKKT +
Sbjct: 1394 DQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTAEQ 1448
Score = 56.2 bits (134), Expect = 1e-08
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
E ++ K KK+KKK K+KK K+KK+KKKK KK K +K+KKK+KK ++T
Sbjct: 1391 EGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTAEQT 1449
Score = 52.0 bits (123), Expect = 2e-07
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 96 LHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRK 150
+ G Q K +KEK+K K+KK K+KK+KKKK KK K + ++K+K+K+K
Sbjct: 1390 VEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKK 1444
Score = 52.0 bits (123), Expect = 2e-07
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK 153
++ K K++KKK K+KK K+KK+KKKK KK K +K+K+K+KK
Sbjct: 1394 DQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKK 1444
Score = 50.4 bits (119), Expect = 7e-07
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
G+ E + + KK+KKK K+KK K+KK+KKKK KK + + ++K+KKK+K
Sbjct: 1386 GMGTVEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKK 1444
Score = 38.1 bits (87), Expect = 0.004
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKK------------KKKKKKKRKRKR 145
G +R++ KEKK K + K + +++ +K K KK+K+K +
Sbjct: 1350 GKAKRDKASGDVKEKKGKGSLGSQGAKDEPEEELQKGMGTVEGGDQSNPKSKKEKKKSDK 1409
Query: 146 KRKRKRKKKRKKKKKKTGNEGAK 168
++K K KK++KKK KK + ++
Sbjct: 1410 RKKDKEKKEKKKKAKKASTKDSE 1432
Score = 30.8 bits (68), Expect = 0.59
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK---K 154
G R+ K ++ + + KKKKK + + +K K K KR + K
Sbjct: 1303 GWESRKRKLSGDQPAARTPRSKKKKKLGAGEGGEASVSPEKTSTTSKGKAKRDKASGDVK 1362
Query: 155 RKKKKKKTGNEGAK 168
KK K G++GAK
Sbjct: 1363 EKKGKGSLGSQGAK 1376
Score = 29.3 bits (64), Expect = 1.7
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 118 KKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGAK 168
++++KK K+ +K + +KRK + R + KKKKK EG +
Sbjct: 1286 EQERKKVVDTTKESSRKGWESRKRKLSGDQPAARTPRSKKKKKLGAGEGGE 1336
>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
sapiens]
Length = 729
Score = 55.5 bits (132), Expect = 2e-08
Identities = 26/59 (44%), Positives = 41/59 (69%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
EE KE + K+KKKKKKK K++++K KKK K KK K K + K +R+R+++R + ++
Sbjct: 642 EEGKEGKTPSKEKKKKKKKGKEEEEKAAKKKSKHKKSKDKEEGKEERRRRQQRPPRSRE 700
Score = 54.7 bits (130), Expect = 4e-08
Identities = 25/65 (38%), Positives = 42/65 (64%)
Query: 95 PLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKK 154
P + +E K KEKKKKKKK K++++K KKK K KK K K+ ++ +R+R+++
Sbjct: 637 PKESSEEGKEGKTPSKEKKKKKKKGKEEEEKAAKKKSKHKKSKDKEEGKEERRRRQQRPP 696
Query: 155 RKKKK 159
R +++
Sbjct: 697 RSRER 701
Score = 53.5 bits (127), Expect = 8e-08
Identities = 25/63 (39%), Positives = 41/63 (65%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
+E E+ KE K K+KKKKKKK K++++K KKK K +K K K + K +++R++++
Sbjct: 638 KESSEEGKEGKTPSKEKKKKKKKGKEEEEKAAKKKSKHKKSKDKEEGKEERRRRQQRPPR 697
Query: 163 GNE 165
E
Sbjct: 698 SRE 700
Score = 53.1 bits (126), Expect = 1e-07
Identities = 24/64 (37%), Positives = 44/64 (68%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK 157
GL + K+ E+ K+ K K+KKKKKKK K++++K KKK + +K K K + K++R++
Sbjct: 631 GLEEAGPKESSEEGKEGKTPSKEKKKKKKKGKEEEEKAAKKKSKHKKSKDKEEGKEERRR 690
Query: 158 KKKK 161
++++
Sbjct: 691 RQQR 694
Score = 52.8 bits (125), Expect = 1e-07
Identities = 23/60 (38%), Positives = 42/60 (70%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
E K+ K K+KKKKKKK K++++K KKK K KK K ++ ++ +R+R+++ + +++T
Sbjct: 643 EGKEGKTPSKEKKKKKKKGKEEEEKAAKKKSKHKKSKDKEEGKEERRRRQQRPPRSRERT 702
Score = 48.9 bits (115), Expect = 2e-06
Identities = 23/66 (34%), Positives = 42/66 (63%)
Query: 96 LHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKR 155
L GL E ++ E+ K+ K K+KKKKKKK K++++K KK+ + +K K K + K
Sbjct: 627 LFGLGLEEAGPKESSEEGKEGKTPSKEKKKKKKKGKEEEEKAAKKKSKHKKSKDKEEGKE 686
Query: 156 KKKKKK 161
++++++
Sbjct: 687 ERRRRQ 692
Score = 43.5 bits (101), Expect = 9e-05
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 90 PSLHLPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKR 149
P L LP L + E+ K+ ++ K+ K K+KKKKKKK K + ++ K+
Sbjct: 612 PKLPLPAFRLKNDSDLFGLGLEEAGPKESSEEGKEGKTPSKEKKKKKKKGKEEEEKAAKK 671
Query: 150 KRKKKRKKKKKKTGNE 165
K K K+ K K++ E
Sbjct: 672 KSKHKKSKDKEEGKEE 687
Score = 42.0 bits (97), Expect = 3e-04
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 120 KKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEG 166
K+ ++ K+ K K+KKKKK+K K + ++ KKK K KK K EG
Sbjct: 638 KESSEEGKEGKTPSKEKKKKKKKGKEEEEKAAKKKSKHKKSKDKEEG 684
Score = 37.4 bits (85), Expect = 0.006
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 121 KKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGAK 168
K+ ++ K+ K K+KKKK+K+ ++ + K KK+ K KK E K
Sbjct: 638 KESSEEGKEGKTPSKEKKKKKKKGKEEEEKAAKKKSKHKKSKDKEEGK 685
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 55.5 bits (132), Expect = 2e-08
Identities = 23/68 (33%), Positives = 47/68 (69%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+RE +KE+EKEK++ K K + K+++K ++K K+K +++++ K K + K K+K + K+K
Sbjct: 398 EREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEK 457
Query: 161 KTGNEGAK 168
+ + +K
Sbjct: 458 EREKDRSK 465
Score = 54.7 bits (130), Expect = 4e-08
Identities = 23/61 (37%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRK-RKRKRKRKRKKKRKKKKK 160
+E+ +EKE+E++K+++K+K++ K K + K+++K ++K K K R+R+R+++ +K R K+K+
Sbjct: 391 KEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKE 450
Query: 161 K 161
K
Sbjct: 451 K 451
Score = 53.5 bits (127), Expect = 8e-08
Identities = 22/72 (30%), Positives = 49/72 (68%)
Query: 97 HGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
H +R++ +EK KEK++ K+K ++K+++++K+++K+K++ K K + K + K + K K K
Sbjct: 372 HSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEK 431
Query: 157 KKKKKTGNEGAK 168
++++ E K
Sbjct: 432 DREREREKEHEK 443
Score = 53.1 bits (126), Expect = 1e-07
Identities = 22/67 (32%), Positives = 45/67 (67%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
RE+++E+EKE++K+K++ K K + K+++K ++K K+K + + + K K + K K+K++
Sbjct: 395 REKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQD 454
Query: 162 TGNEGAK 168
E K
Sbjct: 455 KEKEREK 461
Score = 52.8 bits (125), Expect = 1e-07
Identities = 21/65 (32%), Positives = 45/65 (69%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
++E ++EKE+EK+K++ K K + K+++K ++K K+K +++ + K K + K+K K++ K
Sbjct: 396 EKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDK 455
Query: 161 KTGNE 165
+ E
Sbjct: 456 EKERE 460
Score = 52.8 bits (125), Expect = 1e-07
Identities = 20/61 (32%), Positives = 46/61 (75%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
+E +K++EK+K+K ++++++K+ +K + K+K+K++ K+K + K + K +K++K KK +
Sbjct: 419 KEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSR 478
Query: 162 T 162
T
Sbjct: 479 T 479
Score = 52.4 bits (124), Expect = 2e-07
Identities = 21/65 (32%), Positives = 44/65 (67%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
++E +KEKE+ K K + K+++K ++K K+K ++++++K+ K + K K K + K K+++K
Sbjct: 402 EKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREK 461
Query: 161 KTGNE 165
E
Sbjct: 462 DRSKE 466
Score = 52.4 bits (124), Expect = 2e-07
Identities = 20/61 (32%), Positives = 46/61 (75%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
R++++EK++EK K+K ++++++K+ +K + K+K+K++ K K + K + K +++KK KK
Sbjct: 417 RDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKK 476
Query: 162 T 162
+
Sbjct: 477 S 477
Score = 51.6 bits (122), Expect = 3e-07
Identities = 25/73 (34%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRK-----KKR 155
+RE+++EKEKE+ K K + K+++K ++K K+K ++++++K K + K K K K+R
Sbjct: 400 EREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKER 459
Query: 156 KKKKKKTGNEGAK 168
+K + K +E K
Sbjct: 460 EKDRSKEIDEKRK 472
Score = 51.2 bits (121), Expect = 4e-07
Identities = 20/59 (33%), Positives = 45/59 (76%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
+RE+ +EK+KEK ++++++K+ +K + K+K+K++ K+K++ K + K +++KK KK +
Sbjct: 420 EREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSR 478
Score = 50.4 bits (119), Expect = 7e-07
Identities = 18/62 (29%), Positives = 44/62 (70%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
P ++ K +E+ K + + + K+K ++K K+K++ K+K R+++R+R+++R+K++++ K
Sbjct: 354 PHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGK 413
Query: 160 KK 161
K
Sbjct: 414 NK 415
Score = 50.4 bits (119), Expect = 7e-07
Identities = 21/67 (31%), Positives = 46/67 (68%)
Query: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTG 163
+K++ +EK K+K++ K+K ++K+++++K+++K+K++ K K + K + K + K K+K
Sbjct: 375 DKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDRE 434
Query: 164 NEGAKIH 170
E K H
Sbjct: 435 REREKEH 441
Score = 50.1 bits (118), Expect = 9e-07
Identities = 21/62 (33%), Positives = 48/62 (77%), Gaps = 3/62 (4%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKK---KKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
++ KE+EK+++K K+K ++++++K+ +K K+K+K++ K+++R++ R ++ +KRKK
Sbjct: 415 KDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKD 474
Query: 159 KK 160
KK
Sbjct: 475 KK 476
Score = 49.3 bits (116), Expect = 2e-06
Identities = 21/77 (27%), Positives = 49/77 (63%), Gaps = 9/77 (11%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKR---------KRKRKR 151
+RE +KE EK++ K+K+K++ K+K+++K + K+ +K+KK K+ R +R R
Sbjct: 434 EREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSS 493
Query: 152 KKKRKKKKKKTGNEGAK 168
++R++++ ++ + +
Sbjct: 494 SRERRRRRSRSSSRSPR 510
Score = 48.1 bits (113), Expect = 4e-06
Identities = 20/64 (31%), Positives = 41/64 (64%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
RE ++EKE EK + K+K+K++ K+K+++K + K+ +K++K K+ R R ++ +
Sbjct: 433 REREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRS 492
Query: 162 TGNE 165
+ E
Sbjct: 493 SSRE 496
Score = 47.8 bits (112), Expect = 5e-06
Identities = 19/71 (26%), Positives = 49/71 (69%), Gaps = 6/71 (8%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKK------KKKKKKKKKKKKKKKRKRKRKRKRKRKKK 154
Q++ ++ K KK+ K ++++K + K+K ++K K+K++ +++ R+++R+R+K+
Sbjct: 345 QKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKE 404
Query: 155 RKKKKKKTGNE 165
R+K+K++ N+
Sbjct: 405 REKEKERGKNK 415
Score = 47.8 bits (112), Expect = 5e-06
Identities = 17/61 (27%), Positives = 44/61 (72%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+R + +E+ K + + + K+K ++K K+K++ K+K ++++R+R+++R+++K+R K K
Sbjct: 357 KRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKD 416
Query: 161 K 161
+
Sbjct: 417 R 417
Score = 47.4 bits (111), Expect = 6e-06
Identities = 20/62 (32%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKK--KKKKKRKRKRKRKRKRKKKRKKKK 159
R ++K K+ ++K K+K++ K+K ++K+++++K +K+K+R + + R ++R+K R+K K
Sbjct: 370 RSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDK 429
Query: 160 KK 161
+K
Sbjct: 430 EK 431
Score = 47.4 bits (111), Expect = 6e-06
Identities = 16/64 (25%), Positives = 48/64 (75%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+++ +K+KEK+++++++K+ +K + K+K+K++ K+K+++K + K ++++K K+ +
Sbjct: 422 EKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPP 481
Query: 161 KTGN 164
++ N
Sbjct: 482 RSYN 485
Score = 46.6 bits (109), Expect = 1e-05
Identities = 16/60 (26%), Positives = 44/60 (73%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
RE +K + + + K+K ++K K+K++ K+K ++K+++R+++R+++++R K + + K++
Sbjct: 362 RERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKER 421
Score = 46.6 bits (109), Expect = 1e-05
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 101 QREEKKEKEKEKKKKK---KKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK 157
++E+ KEKE+EK + K +K+KK KK + + ++ + R+R+R+R R R
Sbjct: 450 EKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSP 509
Query: 158 KKKKT 162
+ KT
Sbjct: 510 RTSKT 514
Score = 45.8 bits (107), Expect = 2e-05
Identities = 16/60 (26%), Positives = 44/60 (73%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
R ++K K ++K K+K++ K+K ++K+++++K+++++++R + + R K+R+K ++K
Sbjct: 368 RSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREK 427
Score = 45.4 bits (106), Expect = 2e-05
Identities = 15/61 (24%), Positives = 45/61 (73%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+R + + + + K+K ++K K+K++ K+K ++K+++++++R+++++R + K R K+++
Sbjct: 363 ERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKERE 422
Query: 161 K 161
K
Sbjct: 423 K 423
Score = 44.7 bits (104), Expect = 4e-05
Identities = 17/67 (25%), Positives = 43/67 (64%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
+E+ +E+E+EK+ +K + K+K+K++ K+K+++K + K+ ++++K K+ R R +
Sbjct: 429 KEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASR 488
Query: 162 TGNEGAK 168
++
Sbjct: 489 RSRSSSR 495
Score = 43.1 bits (100), Expect = 1e-04
Identities = 16/65 (24%), Positives = 37/65 (56%)
Query: 97 HGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
H +R + K + + + + ++K +++ K KK+ K ++++K + + + KRK R+
Sbjct: 323 HSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTRE 382
Query: 157 KKKKK 161
K K+K
Sbjct: 383 KIKEK 387
Score = 42.7 bits (99), Expect = 1e-04
Identities = 15/60 (25%), Positives = 37/60 (61%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
R + + ++K +++ K KK+ K ++++K + + + KRK R++ ++K+R K+K +
Sbjct: 336 RSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDR 395
Score = 40.4 bits (93), Expect = 7e-04
Identities = 13/61 (21%), Positives = 33/61 (54%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
R + K + K ++K+ + K + + + + ++K R+R + +KR K R+++K +
Sbjct: 309 RSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSR 368
Query: 162 T 162
+
Sbjct: 369 S 369
Score = 40.4 bits (93), Expect = 7e-04
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 39/100 (39%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKR---------------KRKR 145
++E +K+++KEK+K++ K+K+++K + K+ +K+KK KK R R+R
Sbjct: 438 EKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRER 497
Query: 146 KRKRKR------------------------KKKRKKKKKK 161
+R+R R + K+ KK++K
Sbjct: 498 RRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREK 537
Score = 40.0 bits (92), Expect = 0.001
Identities = 13/58 (22%), Positives = 31/58 (53%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
+ + K + K + + + + ++K +++ K KK+ + R+R++ R R R K+K
Sbjct: 321 KSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRK 378
Score = 39.7 bits (91), Expect = 0.001
Identities = 14/61 (22%), Positives = 32/61 (52%)
Query: 108 KEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGA 167
+ K + K + + + + ++K +++ K KKR + R+R++ R + + K+K E
Sbjct: 325 RRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKI 384
Query: 168 K 168
K
Sbjct: 385 K 385
Score = 39.3 bits (90), Expect = 0.002
Identities = 14/68 (20%), Positives = 34/68 (50%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
R K + K+ + K + + + + ++K +++ K +KR + R+R++ + R + K
Sbjct: 317 RSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDK 376
Query: 162 TGNEGAKI 169
+ KI
Sbjct: 377 RKDTREKI 384
Score = 38.9 bits (89), Expect = 0.002
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
E K + + + K + K ++K+ + K + + R R R++ R+R K KK+ K+
Sbjct: 302 ERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKS 361
Score = 37.7 bits (86), Expect = 0.005
Identities = 14/62 (22%), Positives = 35/62 (56%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+RE+ + KE ++K+KK KK + + ++ + +++R+R+ + + + K K+
Sbjct: 458 EREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKR 517
Query: 161 KT 162
K+
Sbjct: 518 KS 519
Score = 37.0 bits (84), Expect = 0.008
Identities = 11/60 (18%), Positives = 31/60 (51%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
+ K ++K+ + K + + + + ++K +++ K +KR + R+R+K R + +
Sbjct: 315 KSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSR 374
Score = 37.0 bits (84), Expect = 0.008
Identities = 13/65 (20%), Positives = 32/65 (49%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+R ++ + + + K K+K + + + KK KK+ K + +R+++R +
Sbjct: 496 ERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMR 555
Query: 161 KTGNE 165
K+ N+
Sbjct: 556 KSSND 560
Score = 36.6 bits (83), Expect = 0.011
Identities = 10/57 (17%), Positives = 32/57 (56%)
Query: 106 KEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
K + K ++K+ + K + + + + ++K ++R + +KR + ++R+K + ++
Sbjct: 315 KSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRS 371
Score = 34.7 bits (78), Expect = 0.041
Identities = 13/66 (19%), Positives = 30/66 (45%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+R + + + K K+K + + + KK KK++K + +R+R++ +K
Sbjct: 498 RRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKS 557
Query: 161 KTGNEG 166
+G
Sbjct: 558 SNDRDG 563
Score = 33.9 bits (76), Expect = 0.069
Identities = 16/71 (22%), Positives = 38/71 (53%), Gaps = 12/71 (16%)
Query: 103 EEKKEKEKEKK---------KKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRK---RK 150
+EK++K+K+ + ++ + +++++++ + + + K KRK R R
Sbjct: 468 DEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRS 527
Query: 151 RKKKRKKKKKK 161
R KK KK++K+
Sbjct: 528 RNKKDKKREKE 538
Score = 33.9 bits (76), Expect = 0.069
Identities = 13/66 (19%), Positives = 32/66 (48%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
P+ KK+K++EK++ +++++++ +K + K++ K K K+ K+
Sbjct: 525 PRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPD 584
Query: 160 KKTGNE 165
E
Sbjct: 585 SSVSKE 590
Score = 33.1 bits (74), Expect = 0.12
Identities = 13/67 (19%), Positives = 35/67 (52%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
++++K+EKE++ +++++++ +K + K+K +K K K K+ K
Sbjct: 530 KKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSK 589
Query: 161 KTGNEGA 167
+ ++ A
Sbjct: 590 EVDDKDA 596
Score = 32.7 bits (73), Expect = 0.15
Identities = 13/60 (21%), Positives = 31/60 (51%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
R + K ++K + + + KK KK++K++ ++R+R+R ++ + K+K
Sbjct: 507 RSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEK 566
Score = 32.3 bits (72), Expect = 0.20
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
R K K K + + + KK KK++K++ +++++ + RK + K+K +K
Sbjct: 510 RTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEK 569
Score = 30.0 bits (66), Expect = 1.0
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 106 KEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRK---RKRKRKRKKKRKKKKKKT 162
K +++ + + + KK KK++K++ ++++R+R RK R K K +K T
Sbjct: 513 KTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNST 572
Score = 30.0 bits (66), Expect = 1.0
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 110 KEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGN 164
K K + + + KK KK++K++ +++ + + RK R K+K N
Sbjct: 516 KRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKN 570
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 55.5 bits (132), Expect = 2e-08
Identities = 23/68 (33%), Positives = 47/68 (69%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+RE +KE+EKEK++ K K + K+++K ++K K+K +++++ K K + K K+K + K+K
Sbjct: 282 EREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEK 341
Query: 161 KTGNEGAK 168
+ + +K
Sbjct: 342 EREKDRSK 349
Score = 54.7 bits (130), Expect = 4e-08
Identities = 23/61 (37%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRK-RKRKRKRKRKKKRKKKKK 160
+E+ +EKE+E++K+++K+K++ K K + K+++K ++K K K R+R+R+++ +K R K+K+
Sbjct: 275 KEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKE 334
Query: 161 K 161
K
Sbjct: 335 K 335
Score = 53.5 bits (127), Expect = 8e-08
Identities = 22/72 (30%), Positives = 49/72 (68%)
Query: 97 HGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
H +R++ +EK KEK++ K+K ++K+++++K+++K+K++ K K + K + K + K K K
Sbjct: 256 HSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEK 315
Query: 157 KKKKKTGNEGAK 168
++++ E K
Sbjct: 316 DREREREKEHEK 327
Score = 53.1 bits (126), Expect = 1e-07
Identities = 22/67 (32%), Positives = 45/67 (67%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
RE+++E+EKE++K+K++ K K + K+++K ++K K+K + + + K K + K K+K++
Sbjct: 279 REKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQD 338
Query: 162 TGNEGAK 168
E K
Sbjct: 339 KEKEREK 345
Score = 52.8 bits (125), Expect = 1e-07
Identities = 21/65 (32%), Positives = 45/65 (69%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
++E ++EKE+EK+K++ K K + K+++K ++K K+K +++ + K K + K+K K++ K
Sbjct: 280 EKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDK 339
Query: 161 KTGNE 165
+ E
Sbjct: 340 EKERE 344
Score = 52.8 bits (125), Expect = 1e-07
Identities = 20/61 (32%), Positives = 46/61 (75%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
+E +K++EK+K+K ++++++K+ +K + K+K+K++ K+K + K + K +K++K KK +
Sbjct: 303 KEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSR 362
Query: 162 T 162
T
Sbjct: 363 T 363
Score = 52.4 bits (124), Expect = 2e-07
Identities = 21/65 (32%), Positives = 44/65 (67%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
++E +KEKE+ K K + K+++K ++K K+K ++++++K+ K + K K K + K K+++K
Sbjct: 286 EKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREK 345
Query: 161 KTGNE 165
E
Sbjct: 346 DRSKE 350
Score = 52.4 bits (124), Expect = 2e-07
Identities = 20/61 (32%), Positives = 46/61 (75%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
R++++EK++EK K+K ++++++K+ +K + K+K+K++ K K + K + K +++KK KK
Sbjct: 301 RDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKK 360
Query: 162 T 162
+
Sbjct: 361 S 361
Score = 51.6 bits (122), Expect = 3e-07
Identities = 25/73 (34%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRK-----KKR 155
+RE+++EKEKE+ K K + K+++K ++K K+K ++++++K K + K K K K+R
Sbjct: 284 EREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKER 343
Query: 156 KKKKKKTGNEGAK 168
+K + K +E K
Sbjct: 344 EKDRSKEIDEKRK 356
Score = 51.2 bits (121), Expect = 4e-07
Identities = 20/59 (33%), Positives = 45/59 (76%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
+RE+ +EK+KEK ++++++K+ +K + K+K+K++ K+K++ K + K +++KK KK +
Sbjct: 304 EREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSR 362
Score = 50.4 bits (119), Expect = 7e-07
Identities = 18/62 (29%), Positives = 44/62 (70%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
P ++ K +E+ K + + + K+K ++K K+K++ K+K R+++R+R+++R+K++++ K
Sbjct: 238 PHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGK 297
Query: 160 KK 161
K
Sbjct: 298 NK 299
Score = 50.4 bits (119), Expect = 7e-07
Identities = 21/67 (31%), Positives = 46/67 (68%)
Query: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTG 163
+K++ +EK K+K++ K+K ++K+++++K+++K+K++ K K + K + K + K K+K
Sbjct: 259 DKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDRE 318
Query: 164 NEGAKIH 170
E K H
Sbjct: 319 REREKEH 325
Score = 50.1 bits (118), Expect = 9e-07
Identities = 21/62 (33%), Positives = 48/62 (77%), Gaps = 3/62 (4%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKK---KKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
++ KE+EK+++K K+K ++++++K+ +K K+K+K++ K+++R++ R ++ +KRKK
Sbjct: 299 KDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKD 358
Query: 159 KK 160
KK
Sbjct: 359 KK 360
Score = 49.3 bits (116), Expect = 2e-06
Identities = 21/77 (27%), Positives = 49/77 (63%), Gaps = 9/77 (11%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKR---------KRKRKR 151
+RE +KE EK++ K+K+K++ K+K+++K + K+ +K+KK K+ R +R R
Sbjct: 318 EREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSS 377
Query: 152 KKKRKKKKKKTGNEGAK 168
++R++++ ++ + +
Sbjct: 378 SRERRRRRSRSSSRSPR 394
Score = 48.1 bits (113), Expect = 4e-06
Identities = 20/64 (31%), Positives = 41/64 (64%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
RE ++EKE EK + K+K+K++ K+K+++K + K+ +K++K K+ R R ++ +
Sbjct: 317 REREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRS 376
Query: 162 TGNE 165
+ E
Sbjct: 377 SSRE 380
Score = 47.8 bits (112), Expect = 5e-06
Identities = 19/71 (26%), Positives = 49/71 (69%), Gaps = 6/71 (8%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKK------KKKKKKKKKKKKKKKRKRKRKRKRKRKKK 154
Q++ ++ K KK+ K ++++K + K+K ++K K+K++ +++ R+++R+R+K+
Sbjct: 229 QKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKE 288
Query: 155 RKKKKKKTGNE 165
R+K+K++ N+
Sbjct: 289 REKEKERGKNK 299
Score = 47.8 bits (112), Expect = 5e-06
Identities = 17/61 (27%), Positives = 44/61 (72%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+R + +E+ K + + + K+K ++K K+K++ K+K ++++R+R+++R+++K+R K K
Sbjct: 241 KRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKD 300
Query: 161 K 161
+
Sbjct: 301 R 301
Score = 47.4 bits (111), Expect = 6e-06
Identities = 20/62 (32%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKK--KKKKKRKRKRKRKRKRKKKRKKKK 159
R ++K K+ ++K K+K++ K+K ++K+++++K +K+K+R + + R ++R+K R+K K
Sbjct: 254 RSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDK 313
Query: 160 KK 161
+K
Sbjct: 314 EK 315
Score = 47.4 bits (111), Expect = 6e-06
Identities = 16/64 (25%), Positives = 48/64 (75%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+++ +K+KEK+++++++K+ +K + K+K+K++ K+K+++K + K ++++K K+ +
Sbjct: 306 EKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPP 365
Query: 161 KTGN 164
++ N
Sbjct: 366 RSYN 369
Score = 46.6 bits (109), Expect = 1e-05
Identities = 16/60 (26%), Positives = 44/60 (73%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
RE +K + + + K+K ++K K+K++ K+K ++K+++R+++R+++++R K + + K++
Sbjct: 246 RERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKER 305
Score = 46.6 bits (109), Expect = 1e-05
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 101 QREEKKEKEKEKKKKK---KKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK 157
++E+ KEKE+EK + K +K+KK KK + + ++ + R+R+R+R R R
Sbjct: 334 EKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSP 393
Query: 158 KKKKT 162
+ KT
Sbjct: 394 RTSKT 398
Score = 45.8 bits (107), Expect = 2e-05
Identities = 16/60 (26%), Positives = 44/60 (73%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
R ++K K ++K K+K++ K+K ++K+++++K+++++++R + + R K+R+K ++K
Sbjct: 252 RSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREK 311
Score = 45.4 bits (106), Expect = 2e-05
Identities = 15/61 (24%), Positives = 45/61 (73%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+R + + + + K+K ++K K+K++ K+K ++K+++++++R+++++R + K R K+++
Sbjct: 247 ERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKERE 306
Query: 161 K 161
K
Sbjct: 307 K 307
Score = 44.7 bits (104), Expect = 4e-05
Identities = 17/67 (25%), Positives = 43/67 (64%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
+E+ +E+E+EK+ +K + K+K+K++ K+K+++K + K+ ++++K K+ R R +
Sbjct: 313 KEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASR 372
Query: 162 TGNEGAK 168
++
Sbjct: 373 RSRSSSR 379
Score = 43.1 bits (100), Expect = 1e-04
Identities = 16/65 (24%), Positives = 37/65 (56%)
Query: 97 HGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
H +R + K + + + + ++K +++ K KK+ K ++++K + + + KRK R+
Sbjct: 207 HSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTRE 266
Query: 157 KKKKK 161
K K+K
Sbjct: 267 KIKEK 271
Score = 42.7 bits (99), Expect = 1e-04
Identities = 15/60 (25%), Positives = 37/60 (61%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
R + + ++K +++ K KK+ K ++++K + + + KRK R++ ++K+R K+K +
Sbjct: 220 RSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDR 279
Score = 40.4 bits (93), Expect = 7e-04
Identities = 13/61 (21%), Positives = 33/61 (54%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
R + K + K ++K+ + K + + + + ++K R+R + +KR K R+++K +
Sbjct: 193 RSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSR 252
Query: 162 T 162
+
Sbjct: 253 S 253
Score = 40.4 bits (93), Expect = 7e-04
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 39/100 (39%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKR---------------KRKR 145
++E +K+++KEK+K++ K+K+++K + K+ +K+KK KK R R+R
Sbjct: 322 EKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRER 381
Query: 146 KRKRKR------------------------KKKRKKKKKK 161
+R+R R + K+ KK++K
Sbjct: 382 RRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREK 421
Score = 40.0 bits (92), Expect = 0.001
Identities = 13/58 (22%), Positives = 31/58 (53%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
+ + K + K + + + + ++K +++ K KK+ + R+R++ R R R K+K
Sbjct: 205 KSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRK 262
Score = 39.7 bits (91), Expect = 0.001
Identities = 14/61 (22%), Positives = 32/61 (52%)
Query: 108 KEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGA 167
+ K + K + + + + ++K +++ K KKR + R+R++ R + + K+K E
Sbjct: 209 RRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKI 268
Query: 168 K 168
K
Sbjct: 269 K 269
Score = 39.3 bits (90), Expect = 0.002
Identities = 14/68 (20%), Positives = 34/68 (50%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
R K + K+ + K + + + + ++K +++ K +KR + R+R++ + R + K
Sbjct: 201 RSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDK 260
Query: 162 TGNEGAKI 169
+ KI
Sbjct: 261 RKDTREKI 268
Score = 38.9 bits (89), Expect = 0.002
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
E K + + + K + K ++K+ + K + + R R R++ R+R K KK+ K+
Sbjct: 186 ERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKS 245
Score = 37.7 bits (86), Expect = 0.005
Identities = 14/62 (22%), Positives = 35/62 (56%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+RE+ + KE ++K+KK KK + + ++ + +++R+R+ + + + K K+
Sbjct: 342 EREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKR 401
Query: 161 KT 162
K+
Sbjct: 402 KS 403
Score = 37.0 bits (84), Expect = 0.008
Identities = 11/60 (18%), Positives = 31/60 (51%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
+ K ++K+ + K + + + + ++K +++ K +KR + R+R+K R + +
Sbjct: 199 KSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSR 258
Score = 37.0 bits (84), Expect = 0.008
Identities = 13/65 (20%), Positives = 32/65 (49%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+R ++ + + + K K+K + + + KK KK+ K + +R+++R +
Sbjct: 380 ERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMR 439
Query: 161 KTGNE 165
K+ N+
Sbjct: 440 KSSND 444
Score = 36.6 bits (83), Expect = 0.011
Identities = 10/57 (17%), Positives = 32/57 (56%)
Query: 106 KEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
K + K ++K+ + K + + + + ++K ++R + +KR + ++R+K + ++
Sbjct: 199 KSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRS 255
Score = 34.7 bits (78), Expect = 0.041
Identities = 13/66 (19%), Positives = 30/66 (45%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+R + + + K K+K + + + KK KK++K + +R+R++ +K
Sbjct: 382 RRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKS 441
Query: 161 KTGNEG 166
+G
Sbjct: 442 SNDRDG 447
Score = 33.9 bits (76), Expect = 0.069
Identities = 16/71 (22%), Positives = 38/71 (53%), Gaps = 12/71 (16%)
Query: 103 EEKKEKEKEKK---------KKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRK---RK 150
+EK++K+K+ + ++ + +++++++ + + + K KRK R R
Sbjct: 352 DEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRS 411
Query: 151 RKKKRKKKKKK 161
R KK KK++K+
Sbjct: 412 RNKKDKKREKE 422
Score = 33.9 bits (76), Expect = 0.069
Identities = 13/66 (19%), Positives = 32/66 (48%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
P+ KK+K++EK++ +++++++ +K + K++ K K K+ K+
Sbjct: 409 PRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPD 468
Query: 160 KKTGNE 165
E
Sbjct: 469 SSVSKE 474
Score = 33.1 bits (74), Expect = 0.12
Identities = 13/67 (19%), Positives = 35/67 (52%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
++++K+EKE++ +++++++ +K + K+K +K K K K+ K
Sbjct: 414 KKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSK 473
Query: 161 KTGNEGA 167
+ ++ A
Sbjct: 474 EVDDKDA 480
Score = 32.7 bits (73), Expect = 0.15
Identities = 13/60 (21%), Positives = 31/60 (51%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
R + K ++K + + + KK KK++K++ ++R+R+R ++ + K+K
Sbjct: 391 RSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEK 450
Score = 32.3 bits (72), Expect = 0.20
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
R K K K + + + KK KK++K++ +++++ + RK + K+K +K
Sbjct: 394 RTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEK 453
Score = 30.0 bits (66), Expect = 1.0
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 106 KEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRK---RKRKRKRKKKRKKKKKKT 162
K +++ + + + KK KK++K++ ++++R+R RK R K K +K T
Sbjct: 397 KTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNST 456
Score = 30.0 bits (66), Expect = 1.0
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 110 KEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGN 164
K K + + + KK KK++K++ +++ + + RK R K+K N
Sbjct: 400 KRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKN 454
>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
Length = 808
Score = 55.1 bits (131), Expect = 3e-08
Identities = 18/63 (28%), Positives = 54/63 (85%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK 157
G + K+EKE++K++K+++K++K+++K+++K++K+++K++K + K++++R++++K+ +
Sbjct: 716 GSSKETRKQEKERQKQEKERQKQEKEREKERQKQEKEREKQEKEREKQEKERQKQEKKAQ 775
Query: 158 KKK 160
+K
Sbjct: 776 GRK 778
Score = 54.7 bits (130), Expect = 4e-08
Identities = 25/80 (31%), Positives = 60/80 (75%), Gaps = 3/80 (3%)
Query: 90 PSLHLPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKR 149
PSL P KE K++K+++K++K+++K++K+++K+++K++K++ K++++R+
Sbjct: 703 PSLPSPTGNSTPLGSSKETRKQEKERQKQEKERQKQEKEREKERQKQEKEREKQEKERE- 761
Query: 150 KRKKKRKKKKKKTGNEGAKI 169
K++K+R+K++KK +G K+
Sbjct: 762 KQEKERQKQEKKA--QGRKL 779
Score = 52.0 bits (123), Expect = 2e-07
Identities = 17/59 (28%), Positives = 51/59 (86%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
+ +K+EKE++K++K+++K+++K++K+++K++K+++K++K ++K+++K + +K ++K
Sbjct: 726 KERQKQEKERQKQEKEREKERQKQEKEREKQEKEREKQEKERQKQEKKAQGRKLSLRRK 784
Score = 51.6 bits (122), Expect = 3e-07
Identities = 18/69 (26%), Positives = 57/69 (82%), Gaps = 3/69 (4%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK--- 157
+++EK+ +++EK+++K++K+++K+++K++K+++K++K+++++ K ++K+++K + +K
Sbjct: 722 RKQEKERQKQEKERQKQEKEREKERQKQEKEREKQEKEREKQEKERQKQEKKAQGRKLSL 781
Query: 158 KKKKTGNEG 166
++K G G
Sbjct: 782 RRKADGPPG 790
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 55.1 bits (131), Expect = 3e-08
Identities = 26/61 (42%), Positives = 44/61 (72%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
++EEK +KE+ KK+ KK+ KK++KK+ KK+ KK+ K+ +K +K ++K KK +K+ K
Sbjct: 670 KKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPK 729
Query: 161 K 161
K
Sbjct: 730 K 730
Score = 54.3 bits (129), Expect = 5e-08
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 100 PQREE-KKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
P++EE KKE +KE KK++KK+ KK+ KK+ K+ KK+ KK+ K++ K++ K KK KK
Sbjct: 675 PKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEIKK 734
Query: 159 KKKTGNEGA 167
K + +
Sbjct: 735 LPKDAKKSS 743
Score = 52.4 bits (124), Expect = 2e-07
Identities = 24/62 (38%), Positives = 47/62 (75%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
P ++E+K K++E KK+ KK+ KK++KK+ KK+ KK+ K+ K++ K++ K++ K+++K+
Sbjct: 668 PIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKE 727
Query: 160 KK 161
K
Sbjct: 728 PK 729
Score = 52.0 bits (123), Expect = 2e-07
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 95 PLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKK 154
P + ++E+K +KE+K KK++ KK+ KK+ KK++KK+ KK+ K++ K +K KK
Sbjct: 656 PKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKK 715
Query: 155 RKKKKKK 161
+KK+ K
Sbjct: 716 EEKKEVK 722
Score = 51.6 bits (122), Expect = 3e-07
Identities = 25/60 (41%), Positives = 43/60 (71%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
++E K K ++KK++K+K KK+ KK+ K KK++K KK + K++ K++ KK+ KK+ KK
Sbjct: 639 KKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKK 698
Score = 51.6 bits (122), Expect = 3e-07
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
+ E K++EKEK KK+ KK+ K KK++K KK++ KK+ K++ K++ K++ K++ KK+
Sbjct: 645 KPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKET 704
Query: 162 TGNEGAK 168
E K
Sbjct: 705 PPKEVKK 711
Score = 51.6 bits (122), Expect = 3e-07
Identities = 26/68 (38%), Positives = 48/68 (70%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
++ +K+E +KE KK+ KK++KK+ KK+ KK+ K+ KK+ K++ K++ K+++K KK+
Sbjct: 673 EKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEI 732
Query: 161 KTGNEGAK 168
K + AK
Sbjct: 733 KKLPKDAK 740
Score = 51.2 bits (121), Expect = 4e-07
Identities = 25/66 (37%), Positives = 48/66 (72%)
Query: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTG 163
+K+EK K+++ KK+ KK+ KK++KK+ KK+ KK+ ++ K++ K++ KK+ KK++K+
Sbjct: 670 KKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPK 729
Query: 164 NEGAKI 169
E K+
Sbjct: 730 KEIKKL 735
Score = 49.7 bits (117), Expect = 1e-06
Identities = 27/71 (38%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 101 QREEKKEKEKEKKKKKKK---KKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK 157
++EEK++ +KE KK+ K KK++K KK++ KK+ KK+ KK+ K++ K++ K++ K+
Sbjct: 649 KKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKE 708
Query: 158 KKKKTGNEGAK 168
KK+ E K
Sbjct: 709 VKKEVKKEEKK 719
Score = 48.9 bits (115), Expect = 2e-06
Identities = 28/76 (36%), Positives = 49/76 (64%), Gaps = 10/76 (13%)
Query: 103 EEKKEKEKEKKK----------KKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRK 152
++K+EKEK KK+ KK++K KK++ KK+ KK+ KK++KK+ K++ K++ K
Sbjct: 648 DKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPK 707
Query: 153 KKRKKKKKKTGNEGAK 168
+ +K+ KK+ E K
Sbjct: 708 EVKKEVKKEEKKEVKK 723
Score = 48.5 bits (114), Expect = 3e-06
Identities = 23/65 (35%), Positives = 43/65 (66%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
++E K + E +K++K+K KK+ KK+ K KK++K KK+ +K +K +K+++K+ KK
Sbjct: 639 KKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKK 698
Query: 161 KTGNE 165
+ E
Sbjct: 699 EVKKE 703
Score = 47.8 bits (112), Expect = 5e-06
Identities = 26/72 (36%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKK---KKKKRKRKRKRKRKRKKKRK 156
P+ ++K +KE K K + KK++K+K KK+ KK+ K KK+++ +K + K++ KK+ K
Sbjct: 630 PKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIK 689
Query: 157 KKKKKTGNEGAK 168
K++KK + K
Sbjct: 690 KEEKKEPKKEVK 701
Score = 45.1 bits (105), Expect = 3e-05
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 105 KKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
K + KEK KK+ K K + KK++K+K KK+ KK+ K K++ K KK+ KK+ K
Sbjct: 629 KPKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVK 685
Score = 44.7 bits (104), Expect = 4e-05
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 90 PSLHLPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKR 149
PS P + EK+ + + K K+K KK+ K K + KK++K+K KK K++ K
Sbjct: 608 PSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKT 667
Query: 150 KRKKKRKKKKKKTGNEGAK 168
KK+ K KK++ E K
Sbjct: 668 PIKKEEKPKKEEVKKEVKK 686
Score = 44.3 bits (103), Expect = 5e-05
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKK-KKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
++EEKKE +KE KK+ K+ KK+ KK++KK+ KK++K+ K++ K+ K +K +
Sbjct: 689 KKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSE 748
Query: 160 KK 161
K
Sbjct: 749 AK 750
Score = 43.5 bits (101), Expect = 9e-05
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKK---KKRKRKRKRKRKRKKKRK 156
P +E KKE +KE+KK+ KK++K+ KK+ KK K KK + K+ K K KK +
Sbjct: 705 PPKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAKKPAALKPKVPKKEE 764
Query: 157 KKKK 160
KK
Sbjct: 765 SVKK 768
Score = 42.7 bits (99), Expect = 1e-04
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 100 PQREEKKE---KEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
P++E KKE KE +K+ KK++KK+ KK++K+ KK+ KK K +K +K
Sbjct: 696 PKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAKKPAAL 755
Query: 157 KKKKKTGNEGAK 168
K K E K
Sbjct: 756 KPKVPKKEESVK 767
Score = 38.1 bits (87), Expect = 0.004
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKK------KKKK----KKKKKKKKRKRKRKRKRK 150
++EEKKE +KE+K+ KK+ KK K KK + KK K K KK+ K+
Sbjct: 714 KKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAKKPAALKPKVPKKEESVKKDSVAA 773
Query: 151 RKKKRKKKKKKTGNEG 166
K K K K K EG
Sbjct: 774 GKPKEKGKIKVIKKEG 789
Score = 37.4 bits (85), Expect = 0.006
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKK-----KKKKKRKRKRKRKRKRKK 153
+P +EE + E +K+ K K K+K KK+ K KK++K K K++ +K K
Sbjct: 607 VPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDK 666
Query: 154 KRKKKKKKTGNEGAK 168
KK++K E K
Sbjct: 667 TPIKKEEKPKKEEVK 681
Score = 34.7 bits (78), Expect = 0.041
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 101 QREEKKEKEKE--KKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
++E KKE++KE K++K+ KK+ KK K KK + KK + + K+++ KK
Sbjct: 710 KKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAKKPAALKPKVPKKEESVKKD 769
Query: 159 KKKTGNEGAK 168
G K
Sbjct: 770 SVAAGKPKEK 779
Score = 33.5 bits (75), Expect = 0.091
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
++E ++E K + +K+ K K K+K KK+ K K + K++ K K K++ KK
Sbjct: 604 EKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKK 663
Query: 161 K 161
+
Sbjct: 664 E 664
Score = 32.3 bits (72), Expect = 0.20
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
P EK+ KE+ K + +K+ K K K+K KK + + +K +K++ KK+
Sbjct: 600 PSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKKEEKEKPKKE 659
Score = 29.6 bits (65), Expect = 1.3
Identities = 20/73 (27%), Positives = 33/73 (45%)
Query: 87 DAGPSLHLPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRK 146
D+ SL LP + +KE ++E + K +K K + K+K KK K K + K
Sbjct: 540 DSRESLKPAAKPLPSKSVRKESKEETPEVTKVNHVEKPPKVESKEKVMVKKDKPIKTETK 599
Query: 147 RKRKRKKKRKKKK 159
K+ K++
Sbjct: 600 PSVTEKEVPSKEE 612
Score = 28.1 bits (61), Expect = 3.8
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRK-----RKRKRKKK 154
P + E KEK KK K K + K +K+ K++ K + K + + K+K
Sbjct: 577 PPKVESKEKVMVKKDKPIKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEK 636
Query: 155 RKKKKKKTGNEGAK 168
KK+ K E K
Sbjct: 637 TVKKETKVKPEDKK 650
>gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo
sapiens]
Length = 956
Score = 55.1 bits (131), Expect = 3e-08
Identities = 22/63 (34%), Positives = 50/63 (79%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
L R E++EKEK K++ K+ K++ KKKK+++K+ K+K++++KR++ K K ++++ ++++
Sbjct: 348 LKLRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEER 407
Query: 159 KKK 161
+K+
Sbjct: 408 RKE 410
Score = 54.7 bits (130), Expect = 4e-08
Identities = 23/67 (34%), Positives = 49/67 (73%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
L E+KEK KE+ K+ K++ KKKK+++K+ K+K++++K+++ K K +++R K+ ++K
Sbjct: 350 LRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEERRK 409
Query: 159 KKKTGNE 165
+++ E
Sbjct: 410 ERQEALE 416
Score = 54.3 bits (129), Expect = 5e-08
Identities = 26/76 (34%), Positives = 54/76 (71%), Gaps = 8/76 (10%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKR--------K 152
+ E K+ KE+ KKKK+++K+ K+K++++K++K +K+K +K++ K +R+++R +
Sbjct: 361 KEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEERRKERQEALEAKLE 420
Query: 153 KKRKKKKKKTGNEGAK 168
+KRKK+++K E K
Sbjct: 421 EKRKKEEEKRLREEEK 436
Score = 52.8 bits (125), Expect = 1e-07
Identities = 20/69 (28%), Positives = 52/69 (75%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+ ++KKE+EKE K+K++++K++K +K+K +K++ K++++K +++ + +K++K+++K
Sbjct: 370 EAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEERRKERQEALEAKLEEKRKKEEEK 429
Query: 161 KTGNEGAKI 169
+ E +I
Sbjct: 430 RLREEEKRI 438
Score = 52.4 bits (124), Expect = 2e-07
Identities = 22/62 (35%), Positives = 46/62 (74%)
Query: 106 KEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNE 165
+ +EKEK K++ K+ K++ KKKK+++K+ K+K+++ KR++ K K +K+R K++++ +
Sbjct: 353 EREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEERRKERQ 412
Query: 166 GA 167
A
Sbjct: 413 EA 414
Score = 52.4 bits (124), Expect = 2e-07
Identities = 21/69 (30%), Positives = 52/69 (75%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+ +E KEKE+ +K++K +K+K +K++ K++++K++++ + K + KRK++ +K+ ++++K
Sbjct: 377 EEKELKEKERREKREKDEKEKAEKQRLKEERRKERQEALEAKLEEKRKKEEEKRLREEEK 436
Query: 161 KTGNEGAKI 169
+ E A+I
Sbjct: 437 RIKAEKAEI 445
Score = 49.3 bits (116), Expect = 2e-06
Identities = 20/60 (33%), Positives = 45/60 (75%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
++ K E+E+K+K K++ K+ K++ KKKK+++K+ K+K +R+++ K +++K K++ K+
Sbjct: 346 KQLKLRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKE 405
Score = 48.9 bits (115), Expect = 2e-06
Identities = 21/68 (30%), Positives = 49/68 (72%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+R K+ K + ++++K+K K++ K+ K++ KKKK+++K+ ++++R+ KR++ +K K +K+
Sbjct: 342 ERLGKQLKLRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQ 401
Query: 161 KTGNEGAK 168
+ E K
Sbjct: 402 RLKEERRK 409
Score = 48.1 bits (113), Expect = 4e-06
Identities = 17/62 (27%), Positives = 49/62 (79%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
L ++E ++++EK++K+K +K++ K++++K++++ + K ++KRK++ +++ + ++KR K
Sbjct: 381 LKEKERREKREKDEKEKAEKQRLKEERRKERQEALEAKLEEKRKKEEEKRLREEEKRIKA 440
Query: 159 KK 160
+K
Sbjct: 441 EK 442
Score = 46.2 bits (108), Expect = 1e-05
Identities = 19/67 (28%), Positives = 45/67 (67%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
+ +++ K+ K + ++++K+K K++ K+ K++ KKKK+ +++ K K +R+K+ K +K+K
Sbjct: 338 QRDQERLGKQLKLRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEK 397
Query: 162 TGNEGAK 168
+ K
Sbjct: 398 AEKQRLK 404
Score = 45.4 bits (106), Expect = 2e-05
Identities = 18/61 (29%), Positives = 46/61 (75%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
L + +E+ K+ + + ++++K+K K++ K+ K++ KKKK+++++ K K +R++++K +K+
Sbjct: 337 LQRDQERLGKQLKLRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKE 396
Query: 159 K 159
K
Sbjct: 397 K 397
Score = 45.4 bits (106), Expect = 2e-05
Identities = 17/60 (28%), Positives = 46/60 (76%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
QR++++ ++ K + ++++K+K K++ K+ K++ KKKK++ K ++++R+ K+++ +K+K
Sbjct: 338 QRDQERLGKQLKLRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEK 397
Score = 42.7 bits (99), Expect = 1e-04
Identities = 21/67 (31%), Positives = 45/67 (67%), Gaps = 5/67 (7%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKK-----KKKKKKKKKKKKKKKRKRKRKRKRKRKKKR 155
++ EK EKEK +K++ K++++K+++ K ++K+KK+++K+ + + KR + K + R
Sbjct: 388 EKREKDEKEKAEKQRLKEERRKERQEALEAKLEEKRKKEEEKRLREEEKRIKAEKAEITR 447
Query: 156 KKKKKKT 162
+K KT
Sbjct: 448 FFQKPKT 454
Score = 41.2 bits (95), Expect = 4e-04
Identities = 27/118 (22%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 53 THSTHSDPSATVLPGSSTHRLKGKIFHLISIAFCDAGPSLHLPLHGLPQREEKKEK--EK 110
+HS+ S PS+T P K H + F + P + + EK + ++
Sbjct: 283 SHSSLSSPSSTSSPEGPPAPPKQ---HSSTSPFPTSTPLRRITKKFVKGSTEKNKLRLQR 339
Query: 111 EKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGAK 168
++++ K+ K + ++++K+K K++ K+ K+ +K+K + K K++++++K+ +E K
Sbjct: 340 DQERLGKQLKLRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEK 397
>gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 54.7 bits (130), Expect = 4e-08
Identities = 22/65 (33%), Positives = 49/65 (75%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
E+KK++ ++ K+KK+ K++KKK ++K K +++ KKK++ ++K+ ++ +RKK+ ++ K++
Sbjct: 54 EDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQ 113
Query: 163 GNEGA 167
E A
Sbjct: 114 EEEAA 118
Score = 51.6 bits (122), Expect = 3e-07
Identities = 20/67 (29%), Positives = 48/67 (71%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
++KK E +K+KK+ K++KKK ++K K +++ KKK+++ K+K + + ++K++ + K+++
Sbjct: 55 DKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQE 114
Query: 163 GNEGAKI 169
A++
Sbjct: 115 EEAAAQM 121
Score = 49.7 bits (117), Expect = 1e-06
Identities = 17/62 (27%), Positives = 51/62 (82%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
P+ ++K+ ++ ++KK+ K++KKK ++K K +++ KKK+++++K+ ++ +RK+++++ K++
Sbjct: 53 PEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQ 112
Query: 160 KK 161
++
Sbjct: 113 QE 114
Score = 49.7 bits (117), Expect = 1e-06
Identities = 20/72 (27%), Positives = 49/72 (68%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
L + KKE ++ KKK ++K K +++ KKK++++KKK ++++RK++ ++ ++++++
Sbjct: 60 LEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAA 119
Query: 159 KKKTGNEGAKIH 170
+ K E ++H
Sbjct: 120 QMKEKEESIQLH 131
Score = 48.9 bits (115), Expect = 2e-06
Identities = 24/65 (36%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 105 KKEKEKEKKKKKKK-KKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTG 163
KKE K + KKK+ + K+KK+ K++KKK ++K K + +K++ + KKK +++++K
Sbjct: 46 KKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQ 105
Query: 164 NEGAK 168
E AK
Sbjct: 106 EEQAK 110
Score = 48.9 bits (115), Expect = 2e-06
Identities = 17/60 (28%), Positives = 48/60 (80%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
++++ E +K KK+ K++KKK ++K K +++ KKK++++K+K + + ++K++++ K+++++
Sbjct: 56 KKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEE 115
Score = 48.1 bits (113), Expect = 4e-06
Identities = 24/72 (33%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKK-----KKKKRKRKRKRKRKRKKKR 155
++E K E +KK+ + K+KK+ K++KKK ++K K KKK+ + K+K + + +KK+
Sbjct: 46 KKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQ 105
Query: 156 KKKKKKTGNEGA 167
+++ K+ E A
Sbjct: 106 EEQAKRQQEEEA 117
Score = 47.8 bits (112), Expect = 5e-06
Identities = 19/63 (30%), Positives = 44/63 (69%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
L ++E + ++KKK+ + K+KK+ K++KKK ++K K ++ +K++ + K+K + +++
Sbjct: 43 LTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEER 102
Query: 159 KKK 161
KK+
Sbjct: 103 KKQ 105
Score = 46.6 bits (109), Expect = 1e-05
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
P+ + K +KE K + KKK+ + K+KK+ K++KKK + K K + + K+K++ +KKK
Sbjct: 37 PKDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKK 96
Score = 45.8 bits (107), Expect = 2e-05
Identities = 19/69 (27%), Positives = 48/69 (69%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
+E KK+ E++ K +++ KKK++++KKK +++++KK++++ KR+++ + + K K++ +
Sbjct: 70 KERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQMKEKEESIQ 129
Query: 162 TGNEGAKIH 170
E + H
Sbjct: 130 LHQEAWERH 138
Score = 43.1 bits (100), Expect = 1e-04
Identities = 20/67 (29%), Positives = 40/67 (59%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
+++ K K++ K + KKK+ + K+KK+ K++KKK ++ + + +KK+ ++KKK
Sbjct: 38 KDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKH 97
Query: 162 TGNEGAK 168
E K
Sbjct: 98 QEEERKK 104
Score = 42.7 bits (99), Expect = 1e-04
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 99 LPQREEK----------KEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRK 148
LP +EK KE+ K+ K KK+ K + KKK+ + K+KK+ K ++K+
Sbjct: 17 LPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKD 76
Query: 149 RKRKKKRKKKKKKTGNEGAK 168
++ K ++ KKK E K
Sbjct: 77 EEKVKAEEESKKKEEEEKKK 96
Score = 42.0 bits (97), Expect = 3e-04
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKK-KKKKRKRKRKRKRKRKKKRKKKK 159
+R + K KK+ K + KKK+ + K+KK+ K +KKK + K K + + KKK +++K
Sbjct: 35 ERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEK 94
Query: 160 KKTGNEGAK 168
KK E K
Sbjct: 95 KKHQEEERK 103
Score = 38.1 bits (87), Expect = 0.004
Identities = 18/68 (26%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRK----RKRKRKRKKKRK 156
+ E KK++E+EKKK +++++KK++++ K++++++ + K K + + +R RK
Sbjct: 83 EEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQMKEKEESIQLHQEAWERHHLRK 142
Query: 157 KKKKKTGN 164
+ + K N
Sbjct: 143 ELRSKNQN 150
Score = 35.8 bits (81), Expect = 0.018
Identities = 13/67 (19%), Positives = 46/67 (68%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+ ++K+E+EK+K +++++KK++++ K++++++ + K+K + + + ++ +K+
Sbjct: 85 ESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQMKEKEESIQLHQEAWERHHLRKEL 144
Query: 161 KTGNEGA 167
++ N+ A
Sbjct: 145 RSKNQNA 151
Score = 33.5 bits (75), Expect = 0.091
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 18/88 (20%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKK------------------KKKKKKKKKKKKKKKKKKK 140
+P +K +EK K+K K KK+ K + KKK+
Sbjct: 1 MPAERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRL 60
Query: 141 RKRKRKRKRKRKKKRKKKKKKTGNEGAK 168
KRK++ K +KK+ ++K K E K
Sbjct: 61 EDDKRKKEDKERKKKDEEKVKAEEESKK 88
>gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 54.7 bits (130), Expect = 4e-08
Identities = 22/65 (33%), Positives = 49/65 (75%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
E+KK++ ++ K+KK+ K++KKK ++K K +++ KKK++ ++K+ ++ +RKK+ ++ K++
Sbjct: 54 EDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQ 113
Query: 163 GNEGA 167
E A
Sbjct: 114 EEEAA 118
Score = 51.6 bits (122), Expect = 3e-07
Identities = 20/67 (29%), Positives = 48/67 (71%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
++KK E +K+KK+ K++KKK ++K K +++ KKK+++ K+K + + ++K++ + K+++
Sbjct: 55 DKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQE 114
Query: 163 GNEGAKI 169
A++
Sbjct: 115 EEAAAQM 121
Score = 49.7 bits (117), Expect = 1e-06
Identities = 17/62 (27%), Positives = 51/62 (82%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
P+ ++K+ ++ ++KK+ K++KKK ++K K +++ KKK+++++K+ ++ +RK+++++ K++
Sbjct: 53 PEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQ 112
Query: 160 KK 161
++
Sbjct: 113 QE 114
Score = 49.7 bits (117), Expect = 1e-06
Identities = 20/72 (27%), Positives = 49/72 (68%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
L + KKE ++ KKK ++K K +++ KKK++++KKK ++++RK++ ++ ++++++
Sbjct: 60 LEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAA 119
Query: 159 KKKTGNEGAKIH 170
+ K E ++H
Sbjct: 120 QMKEKEESIQLH 131
Score = 48.9 bits (115), Expect = 2e-06
Identities = 24/65 (36%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 105 KKEKEKEKKKKKKK-KKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTG 163
KKE K + KKK+ + K+KK+ K++KKK ++K K + +K++ + KKK +++++K
Sbjct: 46 KKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQ 105
Query: 164 NEGAK 168
E AK
Sbjct: 106 EEQAK 110
Score = 48.9 bits (115), Expect = 2e-06
Identities = 17/60 (28%), Positives = 48/60 (80%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
++++ E +K KK+ K++KKK ++K K +++ KKK++++K+K + + ++K++++ K+++++
Sbjct: 56 KKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEE 115
Score = 48.1 bits (113), Expect = 4e-06
Identities = 24/72 (33%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKK-----KKKKRKRKRKRKRKRKKKR 155
++E K E +KK+ + K+KK+ K++KKK ++K K KKK+ + K+K + + +KK+
Sbjct: 46 KKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQ 105
Query: 156 KKKKKKTGNEGA 167
+++ K+ E A
Sbjct: 106 EEQAKRQQEEEA 117
Score = 47.8 bits (112), Expect = 5e-06
Identities = 19/63 (30%), Positives = 44/63 (69%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
L ++E + ++KKK+ + K+KK+ K++KKK ++K K ++ +K++ + K+K + +++
Sbjct: 43 LTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEER 102
Query: 159 KKK 161
KK+
Sbjct: 103 KKQ 105
Score = 46.6 bits (109), Expect = 1e-05
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
P+ + K +KE K + KKK+ + K+KK+ K++KKK + K K + + K+K++ +KKK
Sbjct: 37 PKDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKK 96
Score = 45.8 bits (107), Expect = 2e-05
Identities = 19/69 (27%), Positives = 48/69 (69%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
+E KK+ E++ K +++ KKK++++KKK +++++KK++++ KR+++ + + K K++ +
Sbjct: 70 KERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQMKEKEESIQ 129
Query: 162 TGNEGAKIH 170
E + H
Sbjct: 130 LHQEAWERH 138
Score = 43.1 bits (100), Expect = 1e-04
Identities = 20/67 (29%), Positives = 40/67 (59%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
+++ K K++ K + KKK+ + K+KK+ K++KKK ++ + + +KK+ ++KKK
Sbjct: 38 KDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKH 97
Query: 162 TGNEGAK 168
E K
Sbjct: 98 QEEERKK 104
Score = 42.7 bits (99), Expect = 1e-04
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 99 LPQREEK----------KEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRK 148
LP +EK KE+ K+ K KK+ K + KKK+ + K+KK+ K ++K+
Sbjct: 17 LPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKD 76
Query: 149 RKRKKKRKKKKKKTGNEGAK 168
++ K ++ KKK E K
Sbjct: 77 EEKVKAEEESKKKEEEEKKK 96
Score = 42.0 bits (97), Expect = 3e-04
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKK-KKKKRKRKRKRKRKRKKKRKKKK 159
+R + K KK+ K + KKK+ + K+KK+ K +KKK + K K + + KKK +++K
Sbjct: 35 ERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEK 94
Query: 160 KKTGNEGAK 168
KK E K
Sbjct: 95 KKHQEEERK 103
Score = 38.1 bits (87), Expect = 0.004
Identities = 18/68 (26%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRK----RKRKRKRKKKRK 156
+ E KK++E+EKKK +++++KK++++ K++++++ + K K + + +R RK
Sbjct: 83 EEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQMKEKEESIQLHQEAWERHHLRK 142
Query: 157 KKKKKTGN 164
+ + K N
Sbjct: 143 ELRSKNQN 150
Score = 35.8 bits (81), Expect = 0.018
Identities = 13/67 (19%), Positives = 46/67 (68%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+ ++K+E+EK+K +++++KK++++ K++++++ + K+K + + + ++ +K+
Sbjct: 85 ESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQMKEKEESIQLHQEAWERHHLRKEL 144
Query: 161 KTGNEGA 167
++ N+ A
Sbjct: 145 RSKNQNA 151
Score = 33.5 bits (75), Expect = 0.091
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 18/88 (20%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKK------------------KKKKKKKKKKKKKKKKKKK 140
+P +K +EK K+K K KK+ K + KKK+
Sbjct: 1 MPAERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRL 60
Query: 141 RKRKRKRKRKRKKKRKKKKKKTGNEGAK 168
KRK++ K +KK+ ++K K E K
Sbjct: 61 EDDKRKKEDKERKKKDEEKVKAEEESKK 88
>gi|11067749 bromodomain containing protein 3 [Homo sapiens]
Length = 726
Score = 54.7 bits (130), Expect = 4e-08
Identities = 28/79 (35%), Positives = 48/79 (60%)
Query: 91 SLHLPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRK 150
++H L L Q K K+K++KK+K+KKKK K+K+K+K K K +++KK + ++ +
Sbjct: 472 AVHEQLAALSQAPVNKPKKKKEKKEKEKKKKDKEKEKEKHKVKAEEEKKAKVAPPAKQAQ 531
Query: 151 RKKKRKKKKKKTGNEGAKI 169
+KK KK T G ++
Sbjct: 532 QKKAPAKKANSTTTAGRQL 550
Score = 46.2 bits (108), Expect = 1e-05
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
P + KK+KEK K+K+KKKK K+K+K+K K K +++KK K ++ ++K+ +K
Sbjct: 484 PVNKPKKKKEK-KEKEKKKKDKEKEKEKHKVKAEEEKKAKVAPPAKQAQQKKAPAKKANS 542
Query: 160 KKTGNEGAK 168
T K
Sbjct: 543 TTTAGRQLK 551
Score = 45.8 bits (107), Expect = 2e-05
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKK----KKKKKRKRKRKRKRKRKKKRKK 157
+++K++KEKEKKKK K+K+K+K K K +++KK K K+ ++K+ +K +
Sbjct: 489 KKKKEKKEKEKKKKDKEKEKEKHKVKAEEEKKAKVAPPAKQAQQKKAPAKKANSTTTAGR 548
Query: 158 KKKKTGNEGA 167
+ KK G + +
Sbjct: 549 QLKKGGKQAS 558
Score = 45.4 bits (106), Expect = 2e-05
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 95 PLHGLPQREEKKEKEKEKK-KKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK 153
P++ +++EKKEKEK+KK K+K+K+K K K +++KK K K+ +++K K+
Sbjct: 484 PVNKPKKKKEKKEKEKKKKDKEKEKEKHKVKAEEEKKAKVAPPAKQAQQKKAPAKKANST 543
Query: 154 KRKKKKKKTGNEGA 167
++ K G + A
Sbjct: 544 TTAGRQLKKGGKQA 557
Score = 45.1 bits (105), Expect = 3e-05
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156
Q + K E+ + K KKKK+KK+K+KKKK K+K K K K K + +KK K
Sbjct: 467 QEQLKAVHEQLAALSQAPVNKPKKKKEKKEKEKKKKDKEKEKEKHKVKAEEEKKAK 522
Score = 44.7 bits (104), Expect = 4e-05
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
L + +E+ + E+ + K KKKK+KK+K+KKKK K K K K K K ++++K K
Sbjct: 463 LAELQEQLKAVHEQLAALSQAPVNKPKKKKEKKEKEKKKKDKEKEKEKHKVKAEEEKKAK 522
Score = 38.9 bits (89), Expect = 0.002
Identities = 20/67 (29%), Positives = 38/67 (56%)
Query: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKT 162
EE+ + E +++ K ++ + K KKKK+K+++++K+K K K+K K K K
Sbjct: 457 EERATRLAELQEQLKAVHEQLAALSQAPVNKPKKKKEKKEKEKKKKDKEKEKEKHKVKAE 516
Query: 163 GNEGAKI 169
+ AK+
Sbjct: 517 EEKKAKV 523
Score = 38.5 bits (88), Expect = 0.003
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+ ++KK+KEKEK+K K K +++KK K K+ ++KK K+ ++ +K K+
Sbjct: 497 KEKKKKDKEKEKEKHKVKAEEEKKAKVAPPAKQAQQKKAPAKKANSTTTAGRQLKKGGKQ 556
Query: 161 KTGN 164
+ +
Sbjct: 557 ASAS 560
Score = 35.8 bits (81), Expect = 0.018
Identities = 18/68 (26%), Positives = 36/68 (52%)
Query: 98 GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK 157
G EE++ + +++ K ++ + K KKKK++K K K+K+ ++K+++K
Sbjct: 451 GSSDSEEERATRLAELQEQLKAVHEQLAALSQAPVNKPKKKKEKKEKEKKKKDKEKEKEK 510
Query: 158 KKKKTGNE 165
K K E
Sbjct: 511 HKVKAEEE 518
Score = 29.6 bits (65), Expect = 1.3
Identities = 15/53 (28%), Positives = 30/53 (56%)
Query: 108 KEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
++K++K KK+ K K++ ++KKK+ +KR + + KK +K+K
Sbjct: 638 QKKQRKPFSASGKKQAAKSKEELAQEKKKELEKRLQDVSGQLSSSKKPARKEK 690
Score = 29.3 bits (64), Expect = 1.7
Identities = 15/64 (23%), Positives = 35/64 (54%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
+R K +K+++K KK+ K K++ ++KKK+ +++ + + K+ +K+
Sbjct: 630 ERYVKSCLQKKQRKPFSASGKKQAAKSKEELAQEKKKELEKRLQDVSGQLSSSKKPARKE 689
Query: 161 KTGN 164
K G+
Sbjct: 690 KPGS 693
Score = 28.1 bits (61), Expect = 3.8
Identities = 14/60 (23%), Positives = 31/60 (51%)
Query: 104 EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTG 163
+KK+++ KK+ K K++ ++KKK+ +K+ + + +K +K K +G
Sbjct: 638 QKKQRKPFSASGKKQAAKSKEELAQEKKKELEKRLQDVSGQLSSSKKPARKEKPGSAPSG 697
Score = 28.1 bits (61), Expect = 3.8
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 107 EKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEG 166
+K++ K KK+ K K++ ++KKK+ +K+ + + KK +K+K + G
Sbjct: 638 QKKQRKPFSASGKKQAAKSKEELAQEKKKELEKRLQDVSGQLSSSKKPARKEKPGSAPSG 697
Score = 27.3 bits (59), Expect = 6.5
Identities = 14/63 (22%), Positives = 31/63 (49%)
Query: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
++E+ K K +E+KK K K+ ++KK KK ++ +K ++ +++
Sbjct: 507 EKEKHKVKAEEEKKAKVAPPAKQAQQKKAPAKKANSTTTAGRQLKKGGKQASASYDSEEE 566
Query: 161 KTG 163
+ G
Sbjct: 567 EEG 569
Score = 27.3 bits (59), Expect = 6.5
Identities = 14/54 (25%), Positives = 28/54 (51%)
Query: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRK 152
L +++ K KK+ K K++ ++KKK+ +K+ + + +K RK K
Sbjct: 637 LQKKQRKPFSASGKKQAAKSKEELAQEKKKELEKRLQDVSGQLSSSKKPARKEK 690
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,493,352
Number of Sequences: 37866
Number of extensions: 547213
Number of successful extensions: 89042
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1591
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 17041
Number of HSP's gapped (non-prelim): 31284
length of query: 170
length of database: 18,247,518
effective HSP length: 95
effective length of query: 75
effective length of database: 14,650,248
effective search space: 1098768600
effective search space used: 1098768600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.