Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239752306
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752306 PREDICTED: hypothetical protein XP_002348194 [Homo
sapiens]
(160 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752306 PREDICTED: hypothetical protein XP_002348194 [Homo ... 330 3e-91
gi|239746817 PREDICTED: hypothetical protein XP_002343856 [Homo ... 330 3e-91
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 40 0.001
gi|239755778 PREDICTED: mucin 19, oligomeric [Homo sapiens] 38 0.003
gi|239750280 PREDICTED: mucin 19, oligomeric [Homo sapiens] 38 0.003
gi|239744589 PREDICTED: mucin 19 [Homo sapiens] 38 0.003
gi|48762934 alpha 2 type I collagen [Homo sapiens] 38 0.004
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 38 0.004
gi|239751047 PREDICTED: hypothetical protein isoform 3 [Homo sap... 37 0.006
gi|239751045 PREDICTED: hypothetical protein isoform 2 [Homo sap... 37 0.006
gi|239751043 PREDICTED: hypothetical protein isoform 1 [Homo sap... 37 0.006
gi|239745488 PREDICTED: hypothetical protein XP_002343476 isofor... 37 0.006
gi|239745486 PREDICTED: hypothetical protein XP_002343475 isofor... 37 0.006
gi|239745484 PREDICTED: hypothetical protein XP_002343474 isofor... 37 0.006
gi|57864582 hornerin [Homo sapiens] 37 0.007
gi|67782356 corneodesmosin precursor [Homo sapiens] 37 0.009
gi|11386161 alpha 2 type IX collagen [Homo sapiens] 37 0.009
gi|116805350 homeo box (H6 family) 1 [Homo sapiens] 37 0.009
gi|169205117 PREDICTED: hypothetical protein [Homo sapiens] 36 0.016
gi|154354974 phosphatase and actin regulator 2 isoform 3 [Homo s... 36 0.016
gi|154354968 phosphatase and actin regulator 2 isoform 1 [Homo s... 36 0.016
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 35 0.021
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 35 0.021
gi|38683860 insulin receptor substrate 2 [Homo sapiens] 35 0.021
gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo sapi... 35 0.021
gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens] 35 0.021
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 35 0.036
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 35 0.036
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 35 0.036
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 35 0.036
>gi|239752306 PREDICTED: hypothetical protein XP_002348194 [Homo
sapiens]
Length = 160
Score = 330 bits (846), Expect = 3e-91
Identities = 160/160 (100%), Positives = 160/160 (100%)
Query: 1 MLGGSELGVSSTGALTNVCVGSRDGVSAGPGAWRPEPLPDPGVRSGPGPPSRLGLSGSSR 60
MLGGSELGVSSTGALTNVCVGSRDGVSAGPGAWRPEPLPDPGVRSGPGPPSRLGLSGSSR
Sbjct: 1 MLGGSELGVSSTGALTNVCVGSRDGVSAGPGAWRPEPLPDPGVRSGPGPPSRLGLSGSSR 60
Query: 61 SRGFRPFCGWEISGLEAAWPPACPAVSITTAGSRAGTPSCGGTSGSALVVSGTNPLSPAT 120
SRGFRPFCGWEISGLEAAWPPACPAVSITTAGSRAGTPSCGGTSGSALVVSGTNPLSPAT
Sbjct: 61 SRGFRPFCGWEISGLEAAWPPACPAVSITTAGSRAGTPSCGGTSGSALVVSGTNPLSPAT 120
Query: 121 SNSSLGPSTFTSGGKARPKPGSTLSSSDFRFGASGGVRMT 160
SNSSLGPSTFTSGGKARPKPGSTLSSSDFRFGASGGVRMT
Sbjct: 121 SNSSLGPSTFTSGGKARPKPGSTLSSSDFRFGASGGVRMT 160
>gi|239746817 PREDICTED: hypothetical protein XP_002343856 [Homo
sapiens]
Length = 160
Score = 330 bits (846), Expect = 3e-91
Identities = 160/160 (100%), Positives = 160/160 (100%)
Query: 1 MLGGSELGVSSTGALTNVCVGSRDGVSAGPGAWRPEPLPDPGVRSGPGPPSRLGLSGSSR 60
MLGGSELGVSSTGALTNVCVGSRDGVSAGPGAWRPEPLPDPGVRSGPGPPSRLGLSGSSR
Sbjct: 1 MLGGSELGVSSTGALTNVCVGSRDGVSAGPGAWRPEPLPDPGVRSGPGPPSRLGLSGSSR 60
Query: 61 SRGFRPFCGWEISGLEAAWPPACPAVSITTAGSRAGTPSCGGTSGSALVVSGTNPLSPAT 120
SRGFRPFCGWEISGLEAAWPPACPAVSITTAGSRAGTPSCGGTSGSALVVSGTNPLSPAT
Sbjct: 61 SRGFRPFCGWEISGLEAAWPPACPAVSITTAGSRAGTPSCGGTSGSALVVSGTNPLSPAT 120
Query: 121 SNSSLGPSTFTSGGKARPKPGSTLSSSDFRFGASGGVRMT 160
SNSSLGPSTFTSGGKARPKPGSTLSSSDFRFGASGGVRMT
Sbjct: 121 SNSSLGPSTFTSGGKARPKPGSTLSSSDFRFGASGGVRMT 160
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein
[Homo sapiens]
Length = 3969
Score = 39.7 bits (91), Expect = 0.001
Identities = 39/127 (30%), Positives = 53/127 (41%), Gaps = 12/127 (9%)
Query: 41 PGVRSGPGPPSRLGLSGSSRSRGFRPFC--GWEISGLEAAWPPACPAVSITTA---GSRA 95
PG G G R GL G+ R R G + G PP+ PAV+ A S A
Sbjct: 13 PGTTGGGGGGGRRGLGGAPRQRVPALLLPPGPPVGGGGPGAPPSPPAVAAAAAAAGSSGA 72
Query: 96 GTPSCGGTSGSALVVSGTNPLSPATSNSSLGPST------FTSGGKARPKPGSTLSSSDF 149
G P G + SA S + S ++S++S GP+ F + + G+ L
Sbjct: 73 GVPG-GAAAASAASSSSASSSSSSSSSASSGPALLRVGPGFDAALQVSAAIGTNLRRFRA 131
Query: 150 RFGASGG 156
FG SGG
Sbjct: 132 VFGESGG 138
Score = 28.5 bits (62), Expect = 2.6
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 80 PPACPAVSITTAGSRAGTPSCGGTSGSALVVSGTNPLSPATSNSSLGPSTFTS 132
PP A +T SR PSCG + S+ ++ +S +S SS PS TS
Sbjct: 436 PPIKIARLESTPNSRFSAPSCGSSEKSSAASQHSSQMSSDSSRSS-SPSVDTS 487
>gi|239755778 PREDICTED: mucin 19, oligomeric [Homo sapiens]
Length = 598
Score = 38.1 bits (87), Expect = 0.003
Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 30/158 (18%)
Query: 4 GSELGVSSTGALTNVCVGSRDGVSA-------GPGAWRPEPLPDPGVRSGPGPPSRLGLS 56
GS + ++TGA + GS+ G + PG+ E GV + +G
Sbjct: 31 GSSVTGTTTGASDDQVTGSKTGTTGVALSTTVAPGSSSTEATTSTGVHR----TTVVGQK 86
Query: 57 GSSRSRGFRPFCGWEISGLEAAWPPACPAVSITTAGSRAGTPSCGGTSGSALVVSGTNPL 116
+ +RG +A + TT+ GT G +G+ VVSG N +
Sbjct: 87 TGATTRG-------------SAKQGTRSTIEATTSFRGTGTTGSGMNTGTTGVVSG-NTI 132
Query: 117 SPATSNSSLGPSTFTSGGKARPKPGSTLSSSDFRFGAS 154
SP++ N+ TSG RP PGS + ++ G +
Sbjct: 133 SPSSFNTEA-----TSGTSERPNPGSEIGTTGIVSGTT 165
>gi|239750280 PREDICTED: mucin 19, oligomeric [Homo sapiens]
Length = 598
Score = 38.1 bits (87), Expect = 0.003
Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 30/158 (18%)
Query: 4 GSELGVSSTGALTNVCVGSRDGVSA-------GPGAWRPEPLPDPGVRSGPGPPSRLGLS 56
GS + ++TGA + GS+ G + PG+ E GV + +G
Sbjct: 31 GSSVTGTTTGASDDQVTGSKTGTTGVALSTTVAPGSSSTEATTSTGVHR----TTVVGQK 86
Query: 57 GSSRSRGFRPFCGWEISGLEAAWPPACPAVSITTAGSRAGTPSCGGTSGSALVVSGTNPL 116
+ +RG +A + TT+ GT G +G+ VVSG N +
Sbjct: 87 TGATTRG-------------SAKQGTRSTIEATTSFRGTGTTGSGMNTGTTGVVSG-NTI 132
Query: 117 SPATSNSSLGPSTFTSGGKARPKPGSTLSSSDFRFGAS 154
SP++ N+ TSG RP PGS + ++ G +
Sbjct: 133 SPSSFNTEA-----TSGTSERPNPGSEIGTTGIVSGTT 165
>gi|239744589 PREDICTED: mucin 19 [Homo sapiens]
Length = 598
Score = 38.1 bits (87), Expect = 0.003
Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 30/158 (18%)
Query: 4 GSELGVSSTGALTNVCVGSRDGVSA-------GPGAWRPEPLPDPGVRSGPGPPSRLGLS 56
GS + ++TGA + GS+ G + PG+ E GV + +G
Sbjct: 31 GSSVTGTTTGASDDQVTGSKTGTTGVALSTTVAPGSSSTEATTSTGVHR----TTVVGQK 86
Query: 57 GSSRSRGFRPFCGWEISGLEAAWPPACPAVSITTAGSRAGTPSCGGTSGSALVVSGTNPL 116
+ +RG +A + TT+ GT G +G+ VVSG N +
Sbjct: 87 TGATTRG-------------SAKQGTRSTIEATTSFRGTGTTGSGMNTGTTGVVSG-NTI 132
Query: 117 SPATSNSSLGPSTFTSGGKARPKPGSTLSSSDFRFGAS 154
SP++ N+ TSG RP PGS + ++ G +
Sbjct: 133 SPSSFNTEA-----TSGTSERPNPGSEIGTTGIVSGTT 165
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 37.7 bits (86), Expect = 0.004
Identities = 32/110 (29%), Positives = 40/110 (36%), Gaps = 16/110 (14%)
Query: 24 DGVSAGPGAWRPEPLPDPGVRSGPGPPSRLGLSGSSRSRGFRPFCG-------WEISGLE 76
DG+ PGA PGV+ PG P G G + +RG G G +
Sbjct: 186 DGLKGQPGA--------PGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSD 237
Query: 77 AAWPPACPAVSITTAGSRAGTPSCGGTSGSALVVSGTNPLSPATSNSSLG 126
+ P PA I +AG G P G G V P PA +G
Sbjct: 238 GSVGPVGPAGPIGSAGP-PGFPGAPGPKGEIGAVGNAGPAGPAGPRGEVG 286
Score = 28.9 bits (63), Expect = 2.0
Identities = 29/92 (31%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Query: 21 GSRDGVSAGPGAWRPEPLPDP-GVRSGPGPPSRLGLSGSSRSRGFRPFCGWEISGLEAAW 79
G G++ PGA P P G+ PGPP G G RG + G + A
Sbjct: 780 GGPPGMTGFPGAAGRTGPPGPSGISGPPGPPGPAGKEGLRGPRGDQGPVG-RTGEVGAVG 838
Query: 80 PPAC-----PAVSITTAGSRAGTPSCGGTSGS 106
PP P+ TAG GTP G G+
Sbjct: 839 PPGFAGEKGPSGEAGTAGP-PGTPGPQGLLGA 869
Score = 28.1 bits (61), Expect = 3.4
Identities = 28/105 (26%), Positives = 38/105 (36%), Gaps = 4/105 (3%)
Query: 25 GVSAGPGAWRPE-PLPDPGVRSGPGPPSRLGLSGSSRSRGFRPFCGWEISGLEAAWPPAC 83
G++ PGA P + PGV PG R G G+ G G + E +P
Sbjct: 898 GIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHK---GERGYPGNI 954
Query: 84 PAVSITTAGSRAGTPSCGGTSGSALVVSGTNPLSPATSNSSLGPS 128
V A G G G+ + P+ PA + GPS
Sbjct: 955 GPVGAAGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPS 999
Score = 26.9 bits (58), Expect = 7.5
Identities = 37/135 (27%), Positives = 47/135 (34%), Gaps = 8/135 (5%)
Query: 24 DGVSAGPGAWRPEPLPD-PGVRSGPGPPSRLGLSGSSRSRGFRPFCGWEISGLEAAWPPA 82
DG + G P+ + G + PGPP GL G S G G GL +
Sbjct: 525 DGNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGER--GLHGEFGLP 582
Query: 83 CPAVSITTAGSRAGTPSCGGTSGSALVVSGTNPLSPATSNSSLG-PSTFTSGGKARPKPG 141
PA G R G P G +G + P P + + G P + G A P
Sbjct: 583 GPA---GPRGER-GPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGP 638
Query: 142 STLSSSDFRFGASGG 156
S L G GG
Sbjct: 639 SGLPGERGAAGIPGG 653
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 37.7 bits (86), Expect = 0.004
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 15/130 (11%)
Query: 3 GGSELGVSSTGALTNVCVGSRDGVSAGPGAWRPEPLPDPGVRSGPGPPSRLGLSGSSRSR 62
GG+ GV+S L + V DG + G G+ P P P + + PS+L S
Sbjct: 1712 GGAGAGVASGPELLDTYVAYLDGQAFG-GSSTPGPPYPPQLMT----PSKLRGRALGASG 1766
Query: 63 GFRPFCGWEISGLEAAWPPACPAVSITTAGS-------RAGTPSCGGTSGSALVVSGTNP 115
G RP GL P P VS+T AG+ P G +G + V P
Sbjct: 1767 GLRP---GPSGGLRDPVTPTSPTVSVTGAGTDGLLALRACSGPPTAGVAGGPVAVEPEVP 1823
Query: 116 LSPATSNSSL 125
P + SSL
Sbjct: 1824 PVPLPTASSL 1833
>gi|239751047 PREDICTED: hypothetical protein isoform 3 [Homo
sapiens]
Length = 196
Score = 37.4 bits (85), Expect = 0.006
Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 21/147 (14%)
Query: 20 VGSRDGVSAGPGAWRPEPLPDPGVRSGPGPPSRLGLSGSSRSRGFRPFCGWEISGLEAAW 79
+G + S G G P LP P R+G G R+ G + ++ + W + L W
Sbjct: 31 LGQQGSGSMGEGFRPPLSLPSPISRAGLGGLKRVERVGLAHTKEY-----WLLMAL--GW 83
Query: 80 PPACPA------VSITTAGSRAGTPSCGGTSGSALVVSGTNPLSPATSNSSLGPSTFTSG 133
PP+ P+ S T G+ A P + + P + A+SNS+ G S+ T
Sbjct: 84 PPSSPSPPSGDCCSCTIGGTPASPPDPAPWA--------SEPGAMASSNSTTGTSSTTGT 135
Query: 134 GKARPKPGSTLSSSDFRFGASGGVRMT 160
+ P S S A+ T
Sbjct: 136 SSSGTPPPPAFSFSCLSLAAAAAAAAT 162
>gi|239751045 PREDICTED: hypothetical protein isoform 2 [Homo
sapiens]
Length = 196
Score = 37.4 bits (85), Expect = 0.006
Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 21/147 (14%)
Query: 20 VGSRDGVSAGPGAWRPEPLPDPGVRSGPGPPSRLGLSGSSRSRGFRPFCGWEISGLEAAW 79
+G + S G G P LP P R+G G R+ G + ++ + W + L W
Sbjct: 31 LGQQGSGSMGEGFRPPLSLPSPISRAGLGGLKRVERVGLAHTKEY-----WLLMAL--GW 83
Query: 80 PPACPA------VSITTAGSRAGTPSCGGTSGSALVVSGTNPLSPATSNSSLGPSTFTSG 133
PP+ P+ S T G+ A P + + P + A+SNS+ G S+ T
Sbjct: 84 PPSSPSPPSGDCCSCTIGGTPASPPDPAPWA--------SEPGAMASSNSTTGTSSTTGT 135
Query: 134 GKARPKPGSTLSSSDFRFGASGGVRMT 160
+ P S S A+ T
Sbjct: 136 SSSGTPPPPAFSFSCLSLAAAAAAAAT 162
>gi|239751043 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
Length = 196
Score = 37.4 bits (85), Expect = 0.006
Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 21/147 (14%)
Query: 20 VGSRDGVSAGPGAWRPEPLPDPGVRSGPGPPSRLGLSGSSRSRGFRPFCGWEISGLEAAW 79
+G + S G G P LP P R+G G R+ G + ++ + W + L W
Sbjct: 31 LGQQGSGSMGEGFRPPLSLPSPISRAGLGGLKRVERVGLAHTKEY-----WLLMAL--GW 83
Query: 80 PPACPA------VSITTAGSRAGTPSCGGTSGSALVVSGTNPLSPATSNSSLGPSTFTSG 133
PP+ P+ S T G+ A P + + P + A+SNS+ G S+ T
Sbjct: 84 PPSSPSPPSGDCCSCTIGGTPASPPDPAPWA--------SEPGAMASSNSTTGTSSTTGT 135
Query: 134 GKARPKPGSTLSSSDFRFGASGGVRMT 160
+ P S S A+ T
Sbjct: 136 SSSGTPPPPAFSFSCLSLAAAAAAAAT 162
>gi|239745488 PREDICTED: hypothetical protein XP_002343476 isoform 3
[Homo sapiens]
Length = 196
Score = 37.4 bits (85), Expect = 0.006
Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 21/147 (14%)
Query: 20 VGSRDGVSAGPGAWRPEPLPDPGVRSGPGPPSRLGLSGSSRSRGFRPFCGWEISGLEAAW 79
+G + S G G P LP P R+G G R+ G + ++ + W + L W
Sbjct: 31 LGQQGSGSMGEGFRPPLSLPSPISRAGLGGLKRVERVGLAHTKEY-----WLLMAL--GW 83
Query: 80 PPACPA------VSITTAGSRAGTPSCGGTSGSALVVSGTNPLSPATSNSSLGPSTFTSG 133
PP+ P+ S T G+ A P + + P + A+SNS+ G S+ T
Sbjct: 84 PPSSPSPPSGDCCSCTIGGTPASPPDPAPWA--------SEPGAMASSNSTTGTSSTTGT 135
Query: 134 GKARPKPGSTLSSSDFRFGASGGVRMT 160
+ P S S A+ T
Sbjct: 136 SSSGTPPPPAFSFSCLSLAAAAAAAAT 162
>gi|239745486 PREDICTED: hypothetical protein XP_002343475 isoform 2
[Homo sapiens]
Length = 196
Score = 37.4 bits (85), Expect = 0.006
Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 21/147 (14%)
Query: 20 VGSRDGVSAGPGAWRPEPLPDPGVRSGPGPPSRLGLSGSSRSRGFRPFCGWEISGLEAAW 79
+G + S G G P LP P R+G G R+ G + ++ + W + L W
Sbjct: 31 LGQQGSGSMGEGFRPPLSLPSPISRAGLGGLKRVERVGLAHTKEY-----WLLMAL--GW 83
Query: 80 PPACPA------VSITTAGSRAGTPSCGGTSGSALVVSGTNPLSPATSNSSLGPSTFTSG 133
PP+ P+ S T G+ A P + + P + A+SNS+ G S+ T
Sbjct: 84 PPSSPSPPSGDCCSCTIGGTPASPPDPAPWA--------SEPGAMASSNSTTGTSSTTGT 135
Query: 134 GKARPKPGSTLSSSDFRFGASGGVRMT 160
+ P S S A+ T
Sbjct: 136 SSSGTPPPPAFSFSCLSLAAAAAAAAT 162
>gi|239745484 PREDICTED: hypothetical protein XP_002343474 isoform 1
[Homo sapiens]
Length = 196
Score = 37.4 bits (85), Expect = 0.006
Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 21/147 (14%)
Query: 20 VGSRDGVSAGPGAWRPEPLPDPGVRSGPGPPSRLGLSGSSRSRGFRPFCGWEISGLEAAW 79
+G + S G G P LP P R+G G R+ G + ++ + W + L W
Sbjct: 31 LGQQGSGSMGEGFRPPLSLPSPISRAGLGGLKRVERVGLAHTKEY-----WLLMAL--GW 83
Query: 80 PPACPA------VSITTAGSRAGTPSCGGTSGSALVVSGTNPLSPATSNSSLGPSTFTSG 133
PP+ P+ S T G+ A P + + P + A+SNS+ G S+ T
Sbjct: 84 PPSSPSPPSGDCCSCTIGGTPASPPDPAPWA--------SEPGAMASSNSTTGTSSTTGT 135
Query: 134 GKARPKPGSTLSSSDFRFGASGGVRMT 160
+ P S S A+ T
Sbjct: 136 SSSGTPPPPAFSFSCLSLAAAAAAAAT 162
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 37.0 bits (84), Expect = 0.007
Identities = 40/137 (29%), Positives = 51/137 (37%), Gaps = 9/137 (6%)
Query: 29 GPGAWRPEPLPDPGVRSGPGPPSRLGLSGSSRSRGF--RPFCGWEISGLEAAWPPACPAV 86
G G+ G SG S SGS +S GF W+ SG + +
Sbjct: 1366 GSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGCTQHGSGSGHSS 1425
Query: 87 SITTAGSRAGTPSCGGTSGSALVVSGTNPLSPATSNSSLGPSTFTSGGKARPKP------ 140
S GSR+G S G GS+ S + + S SLG SG P P
Sbjct: 1426 SYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHG 1485
Query: 141 -GSTLSSSDFRFGASGG 156
GS SSS +G+ G
Sbjct: 1486 SGSGQSSSYSPYGSGSG 1502
Score = 37.0 bits (84), Expect = 0.007
Identities = 40/137 (29%), Positives = 51/137 (37%), Gaps = 9/137 (6%)
Query: 29 GPGAWRPEPLPDPGVRSGPGPPSRLGLSGSSRSRGF--RPFCGWEISGLEAAWPPACPAV 86
G G+ G SG S SGS +S GF W+ SG + +
Sbjct: 2306 GSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSS 2365
Query: 87 SITTAGSRAGTPSCGGTSGSALVVSGTNPLSPATSNSSLGPSTFTSGGKARPKP------ 140
S GSR+G S G GS+ S + + S SLG SG P P
Sbjct: 2366 SYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHG 2425
Query: 141 -GSTLSSSDFRFGASGG 156
GS SSS +G+ G
Sbjct: 2426 SGSGQSSSYSPYGSGSG 2442
Score = 36.6 bits (83), Expect = 0.009
Identities = 40/137 (29%), Positives = 51/137 (37%), Gaps = 9/137 (6%)
Query: 29 GPGAWRPEPLPDPGVRSGPGPPSRLGLSGSSRSRGF--RPFCGWEISGLEAAWPPACPAV 86
G G+ G SG S SGS +S GF W+ SG + +
Sbjct: 1836 GSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSS 1895
Query: 87 SITTAGSRAGTPSCGGTSGSALVVSGTNPLSPATSNSSLGPSTFTSGGKARPKP------ 140
S GSR+G S G GS+ S + + S SLG SG P P
Sbjct: 1896 SYEQHGSRSGQSSRGEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHG 1955
Query: 141 -GSTLSSSDFRFGASGG 156
GS SSS +G+ G
Sbjct: 1956 SGSGQSSSYGPYGSGSG 1972
Score = 29.6 bits (65), Expect = 1.2
Identities = 22/65 (33%), Positives = 27/65 (41%)
Query: 92 GSRAGTPSCGGTSGSALVVSGTNPLSPATSNSSLGPSTFTSGGKARPKPGSTLSSSDFRF 151
GSR+G S G GS+ S + + S SLG S SG P P S R
Sbjct: 495 GSRSGQSSRGERQGSSAGSSSSYGQHGSGSRQSLGHSRHGSGSGQSPSPSRGRHESGSRQ 554
Query: 152 GASGG 156
+S G
Sbjct: 555 SSSYG 559
Score = 26.9 bits (58), Expect = 7.5
Identities = 30/99 (30%), Positives = 38/99 (38%), Gaps = 3/99 (3%)
Query: 45 SGPGPPSRLGL--SGSSRSRGF-RPFCGWEISGLEAAWPPACPAVSITTAGSRAGTPSCG 101
SG G S G SGS +S GF + SG + + S GSR+G S
Sbjct: 911 SGSGRSSSSGRHGSGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRS 970
Query: 102 GTSGSALVVSGTNPLSPATSNSSLGPSTFTSGGKARPKP 140
GS+ S + + S SLG SG P P
Sbjct: 971 EQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSP 1009
>gi|67782356 corneodesmosin precursor [Homo sapiens]
Length = 529
Score = 36.6 bits (83), Expect = 0.009
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 16/121 (13%)
Query: 36 EPLPDPGVRSGPGPPSRLGLSGSSRSRGFRPFCGWEISGLEAAWPPACPAVSITTAGSRA 95
+P DP + P P L+G S GF + G SG SI++A S
Sbjct: 40 DPCKDPTRITSPNDPC---LTGKGDSSGFSSYSGSSSSGS-----------SISSARSSG 85
Query: 96 GTPSCGGTSGSALVVSGT-NPLSPATSNSSLGPSTFTSGGKARPKPGSTLSSSDFRFGAS 154
G S G +SGS++ G+ P T S + S+ + S L SS G+S
Sbjct: 86 GGSS-GSSSGSSIAQGGSAGSFKPGTGYSQVSYSSGSGSSLQGASGSSQLGSSSSHSGSS 144
Query: 155 G 155
G
Sbjct: 145 G 145
Score = 32.0 bits (71), Expect = 0.23
Identities = 19/71 (26%), Positives = 29/71 (40%)
Query: 88 ITTAGSRAGTPSCGGTSGSALVVSGTNPLSPATSNSSLGPSTFTSGGKARPKPGSTLSSS 147
+T G +G S G+S S +S +S SS G S G KPG+ S
Sbjct: 56 LTGKGDSSGFSSYSGSSSSGSSISSARSSGGGSSGSSSGSSIAQGGSAGSFKPGTGYSQV 115
Query: 148 DFRFGASGGVR 158
+ G+ ++
Sbjct: 116 SYSSGSGSSLQ 126
Score = 27.3 bits (59), Expect = 5.7
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 45 SGPGPPSRLGLSGSSRSRGFRP-------FCGWEISGLEAAWPPACPAV-SITTAGSRAG 96
S P PS+ S +S + F+P CG +G + P+ V S ++ S +G
Sbjct: 353 SNPIIPSQ---SAASSAIAFQPVGTGGVQLCGGGSTGSKGPCSPSSSRVPSSSSISSSSG 409
Query: 97 TP--SCGGTSGSALVVSGTNPLSPATSNSSLG 126
P CG S S GT S ++S+ S G
Sbjct: 410 LPYHPCGSASQSPCSPPGTGSFSSSSSSQSSG 441
>gi|11386161 alpha 2 type IX collagen [Homo sapiens]
Length = 689
Score = 36.6 bits (83), Expect = 0.009
Identities = 18/39 (46%), Positives = 19/39 (48%)
Query: 25 GVSAGPGAWRPEPLPDPGVRSGPGPPSRLGLSGSSRSRG 63
GV PG P LP PG PGPP +GL G RG
Sbjct: 99 GVKGQPGLPGPPGLPGPGFAGPPGPPGPVGLPGEIGIRG 137
Score = 30.4 bits (67), Expect = 0.68
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 9/67 (13%)
Query: 41 PGVRSGPGPPSRLGLSGSSRSRGFRPFCGWEISGLEAAWPPACPAVSITTAGSRAGTPSC 100
PG GPP R G G S G R G I+G + A P P ++ + GTP
Sbjct: 264 PGEEGPRGPPGRAGEKGDEGSPGIRGPQG--ITGPKGATGP--PGIN-----GKDGTPGT 314
Query: 101 GGTSGSA 107
G GSA
Sbjct: 315 PGMKGSA 321
Score = 28.5 bits (62), Expect = 2.6
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Query: 23 RDGVSAGPGAWRPEPLPD---PGVRSGPGPPSRLGLSGS 58
+ GV PG P P D PGV+ PGPP GL+G+
Sbjct: 467 QQGVRGEPGY--PGPSGDAGAPGVQGYPGPPGPRGLAGN 503
Score = 27.3 bits (59), Expect = 5.7
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 24 DGVSAGPGAWRPEPLPDPGVRSGPGPPSRLGLSG 57
DG++ G P P+ PGV+ PG P GL G
Sbjct: 83 DGLTGAKG--EPGPMGIPGVKGQPGLPGPPGLPG 114
Score = 26.6 bits (57), Expect = 9.8
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 24 DGVSAGPG-AWRPEPLPDPGVRSGPGPPSRLGLSGSSRSRG 63
DG + PG A P P +PG GP + G+ G + ++G
Sbjct: 50 DGDNGPPGKAGPPGPKGEPGKAGPDGPDGKPGIDGLTGAKG 90
>gi|116805350 homeo box (H6 family) 1 [Homo sapiens]
Length = 348
Score = 36.6 bits (83), Expect = 0.009
Identities = 33/99 (33%), Positives = 37/99 (37%), Gaps = 23/99 (23%)
Query: 29 GPGAWRPEPLPDPGVRSGPGPPSRLGLSGSSR-----------------SRGFRPFCGWE 71
GPGA P P PG PGPP LG G++R S P G E
Sbjct: 88 GPGALGLGPRPPPG----PGPPFALGCGGAARWYPRAHGGYGGGLSPDTSDRDSPETGEE 143
Query: 72 ISGLEAAWP--PACPAVSITTAGSRAGTPSCGGTSGSAL 108
+ E AWP P AV A A P+ G S L
Sbjct: 144 MGRAEGAWPRGPGPGAVQREAAELAARGPAAGTEEASEL 182
Score = 26.6 bits (57), Expect = 9.8
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Query: 109 VVSGTNPLSPATSNSSLGPSTFTSGGKARPKPGSTLSSSDFRFGASGGVR 158
+++GT P A + + LGP G + P PG F G G R
Sbjct: 71 LLAGTGPGGEARARALLGPGALGLGPRPPPGPG-----PPFALGCGGAAR 115
>gi|169205117 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 35.8 bits (81), Expect = 0.016
Identities = 46/160 (28%), Positives = 58/160 (36%), Gaps = 23/160 (14%)
Query: 4 GSELGVSSTGALTNVCVGSRDGVSA----------GPGAWRPEPLPDPG---VRSGPGPP 50
G ELGV+ G VG RDGVS P WRP P P PG V P
Sbjct: 91 GRELGVARAGRGIPSQVG-RDGVSRTTAGPTPIPRAPRPWRPPP-PSPGRVGVLLEVLPR 148
Query: 51 SRLGLSGS---SRSRGFRPFCGWEISGL--EAAWPPACPAVSITTAGSRAGTPSCGGTSG 105
S L + + R RG C +G ++ P C V + A + G GG +G
Sbjct: 149 SLLQIRRALALGRQRGSYRICA---NGFYKQSRKTPVCCRVLLVRARGKPGCSPRGGAAG 205
Query: 106 SALVVSGTNPLSPATSNSSLGPSTFTSGGKARPKPGSTLS 145
G P S P ++ R PG L+
Sbjct: 206 PGACELGEGRRLPRAPGPSPPPLPASADAAGRLPPGGRLA 245
>gi|154354974 phosphatase and actin regulator 2 isoform 3 [Homo
sapiens]
Length = 634
Score = 35.8 bits (81), Expect = 0.016
Identities = 37/133 (27%), Positives = 50/133 (37%), Gaps = 20/133 (15%)
Query: 30 PGAWRPEPLPDPGVRSGPGPPSRLGLSGSSRSRGFRPF-CGWEISGLEAAWPPACPAVSI 88
P + P+P P P + P PP S + P + G +A PP PA
Sbjct: 156 PPSAPPKPRPKPKPKKSPVPPKGATAGASHKGDEVPPIKKNTKAPGKQAPVPPPKPA--- 212
Query: 89 TTAGSRAGTPSCGGTSGSALVVSGTNPLSPATSNSSLGPSTFTSGGKARPKPG-STLSSS 147
SR T G+S S SP+TS++S +RPK T+SS
Sbjct: 213 ----SRNTTREAAGSSHSKKTTGSKASASPSTSSTS-----------SRPKASKETVSSK 257
Query: 148 DFRFGASGGVRMT 160
G + G R T
Sbjct: 258 AGTVGTTKGKRKT 270
>gi|154354968 phosphatase and actin regulator 2 isoform 1 [Homo
sapiens]
Length = 645
Score = 35.8 bits (81), Expect = 0.016
Identities = 37/133 (27%), Positives = 50/133 (37%), Gaps = 20/133 (15%)
Query: 30 PGAWRPEPLPDPGVRSGPGPPSRLGLSGSSRSRGFRPF-CGWEISGLEAAWPPACPAVSI 88
P + P+P P P + P PP S + P + G +A PP PA
Sbjct: 167 PPSAPPKPRPKPKPKKSPVPPKGATAGASHKGDEVPPIKKNTKAPGKQAPVPPPKPA--- 223
Query: 89 TTAGSRAGTPSCGGTSGSALVVSGTNPLSPATSNSSLGPSTFTSGGKARPKPG-STLSSS 147
SR T G+S S SP+TS++S +RPK T+SS
Sbjct: 224 ----SRNTTREAAGSSHSKKTTGSKASASPSTSSTS-----------SRPKASKETVSSK 268
Query: 148 DFRFGASGGVRMT 160
G + G R T
Sbjct: 269 AGTVGTTKGKRKT 281
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 35.4 bits (80), Expect = 0.021
Identities = 48/156 (30%), Positives = 59/156 (37%), Gaps = 25/156 (16%)
Query: 2 LGGSELGVSSTGALTNVCVGSRDGVSAGPGAWRPEPLPDPGVRSG--------PGPPSRL 53
LGGS L S + LT + G+R P A +P P P PG R G P PPS
Sbjct: 914 LGGS-LSSSDSPLLTPLQPGARS-----PQAAQPSPAP-PGARGGLGLPEHFLPPPPSSR 966
Query: 54 GLSGSSRSRGFRPFCGWEIS-GLEAA------WPPACPAVSITTAGSRAGTPSCGGTSGS 106
S S G P E+S GL PP P AG+ G G T
Sbjct: 967 SPSSSPGQLGQPP---GELSLGLATGPLSTPETPPRQPEPPSLVAGASGGASPVGFTPRG 1023
Query: 107 ALVVSGTNPLSPATSNSSLGPSTFTSGGKARPKPGS 142
L G +P P T S+ ++ + G P S
Sbjct: 1024 GLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASS 1059
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 35.4 bits (80), Expect = 0.021
Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 9/117 (7%)
Query: 46 GPGPPSRLG--LSGSSRSRGFRPFCGWEISGLEAAWPPACP--AVSITTAGSRAGTPSCG 101
GP P R G + GSS P G L+ A PP P ++TT+G++AG
Sbjct: 152 GPEPEGRAGGGIPGSSS-----PHPGTGSRRLKVAPPPPAPKPCKTVTTSGAKAGGGKGA 206
Query: 102 GTSGSALVVSGTNPLSPATSNSSLGPSTFTSGGKARPKPGSTLSSSDFRFGASGGVR 158
G+ S G + + S++ G S + A G + +S+ GA G R
Sbjct: 207 GSRLSWPESEGKPRVKGSKSSAGTGASVSAAATAAAAGGGGSTASTSGGVGAGAGAR 263
>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
Length = 1338
Score = 35.4 bits (80), Expect = 0.021
Identities = 35/115 (30%), Positives = 45/115 (39%), Gaps = 19/115 (16%)
Query: 27 SAGPGAWRPEPLPDPGVRSGPG----PPSRLGLSGSSRSRGFRPFCGWEISGLEAAWPPA 82
S G+ P+ PG R PPS+ GL SR+ AA PPA
Sbjct: 306 SQSSGSSATHPISVPGARRHHHLVNLPPSQTGLVRRSRTDSL------------AATPPA 353
Query: 83 --CPAVSITTAGSRAGTPSCGGTSGSALVVS-GTNPLSPATSNSSLGPSTFTSGG 134
C + + TA G + G + A VS +PLSP + L S SGG
Sbjct: 354 AKCSSCRVRTASEGDGGAAAGAAAAGARPVSVAGSPLSPGPVRAPLSRSHTLSGG 408
>gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo
sapiens]
Length = 946
Score = 35.4 bits (80), Expect = 0.021
Identities = 40/131 (30%), Positives = 52/131 (39%), Gaps = 26/131 (19%)
Query: 35 PEPLPDPGVRSGPGPPSRLGLSGSSRSRGFRPFCGWEISGLEAAWPPACPAVSITTAGSR 94
P P P RS PP R+ + G+ RS R +W CP S T +G +
Sbjct: 175 PSPCP---FRSSSQPPGRVLVQGA-RSEERRT----------KSWGEQCPETSGTDSGRK 220
Query: 95 AGTPSCGGTSGSALVVSGTNPL---SPATSNSSLGPSTFT---SGGKARPKPGS-TLSSS 147
G C S+ V G PL + T + + GPS F G A P+ GS T
Sbjct: 221 GGPSLC-----SSQVKKGMPPLPGRAAPTGSEAQGPSAFVRMEKGIPASPRCGSPTAMEI 275
Query: 148 DFRFGASGGVR 158
D R + G R
Sbjct: 276 DKRGSPTPGTR 286
>gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens]
Length = 955
Score = 35.4 bits (80), Expect = 0.021
Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Query: 35 PEPLPDPGVRSGPGPPSRLGLSGSSRSRGFRPFCG--WEISGLEAAWPPACPAVSITTAG 92
P P + +GP P LG SRSR P C W G C A
Sbjct: 371 PRGPESPRLAAGPSPCWHLGAMHESRSRWTEPGCSQCWCEDGKVTCEKVRCEAACSHPIP 430
Query: 93 SRAG--TPSCGGTSGSALVVSGTNPLSPATSNSSL 125
SR G PSC G S +V + + SP N ++
Sbjct: 431 SRDGGCCPSCTGCFHSGVVRAEGDVFSPPNENCTV 465
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 34.7 bits (78), Expect = 0.036
Identities = 28/98 (28%), Positives = 36/98 (36%), Gaps = 16/98 (16%)
Query: 25 GVSAGPGAWRPE----PLPDPGVRSGPGPPSRLGLSGSSRSRGFRPFCGWEISGLEAAWP 80
G++ PG PE PL PG PGPP +G+ G S G G ++
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKG-------SSGD 625
Query: 81 PACPAVSITTAGSRAGTPSCGGTSGSALVVSGTNPLSP 118
P P AG P G G V + P+ P
Sbjct: 626 PGKPG-----EAGNAGVPGQRGAPGKDGEVGPSGPVGP 658
Score = 30.4 bits (67), Expect = 0.68
Identities = 38/127 (29%), Positives = 46/127 (36%), Gaps = 10/127 (7%)
Query: 20 VGSRDGVSAGPGAWRPEPLPDPGVRSGPGPPSRLGLSGSSRSRGFRPFCGWE----ISGL 75
VG R G + PG P DPG PGP G +G++ RG G + GL
Sbjct: 953 VGDR-GPAGPPGG--PGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGL 1009
Query: 76 EAAWPPACPA-VSITTAGSRAGTPSCGGTSGSALVVSGTNPLSPATSNSSLGPSTFTSGG 134
P P V T A G P G GS V P PA ++ + G
Sbjct: 1010 PG--PAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGER 1067
Query: 135 KARPKPG 141
R PG
Sbjct: 1068 GDRGDPG 1074
Score = 29.6 bits (65), Expect = 1.2
Identities = 34/118 (28%), Positives = 43/118 (36%), Gaps = 7/118 (5%)
Query: 25 GVSAGPGAWRPE-PLPDPGVRSGPGPPSRLGLSGSSRSRGFRPFCGWEISGLEAAWPPAC 83
G PG P PL PG PG P G +G + +RG G + E P
Sbjct: 357 GAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPE---GPQGQRGETGPPGPV 413
Query: 84 PAVSITTAGSRAGTPSCGGTSGSALVVSGTNPLSPATSNSSLGPSTFTSGGKARPKPG 141
+ + A GTP G +GS + P A S GP T R +PG
Sbjct: 414 GSPGLPGAIGTDGTPGAKGPTGSP---GTSGPPGSAGPPGSPGPQGSTGPQGIRGQPG 468
Score = 27.7 bits (60), Expect = 4.4
Identities = 29/98 (29%), Positives = 39/98 (39%), Gaps = 13/98 (13%)
Query: 21 GSR--DGVSAGPGAWRPE-PLPDPGVRSGPGPPSRLGLSGSSRSRGFR----PFCGWEIS 73
GSR +G + G P+ P PGV+ PG P + G +GS +G P +
Sbjct: 834 GSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVP 893
Query: 74 GLEAA----WPPACPAVSITTAGSRAGTPSCGGTSGSA 107
GL+ PP A + R G P G G A
Sbjct: 894 GLKGGRGTQGPPG--ATGFPGSAGRVGPPGPAGAPGPA 929
Score = 26.6 bits (57), Expect = 9.8
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 7/46 (15%)
Query: 25 GVSAGPGAWRPEPLPDP-------GVRSGPGPPSRLGLSGSSRSRG 63
G S PG+ P P P G+R PG P G G + +G
Sbjct: 438 GTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKG 483
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 34.7 bits (78), Expect = 0.036
Identities = 34/110 (30%), Positives = 41/110 (37%), Gaps = 15/110 (13%)
Query: 39 PDPGVRSGPGPPSRLGLSGSSR-SRGFRPFCGWE-ISGLEAAWPPACPAVSITTAGSRAG 96
P+ G + P P + L + SRG P + G WPPA T GS G
Sbjct: 649 PEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPA------TGPGSADG 702
Query: 97 TPSCGGTSGSALVVSGTNPLSPATSNSSLGPSTFTSGGKARPKPGSTLSS 146
+ T G L P GPS TSGGKA G+ SS
Sbjct: 703 LCTIYETEGPESATPAPGALDP-------GPSPGTSGGKAAAGAGAGASS 745
Score = 26.6 bits (57), Expect = 9.8
Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 35/154 (22%)
Query: 2 LGGSELGVSS--TGALTNVCVGSRDGVSAGPGAWR-----------PEPLPDPGVRSGPG 48
+GG+ + S+ G + SR+ S P + R P P+ PG SG
Sbjct: 65 IGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTT 124
Query: 49 PPSRLGLSGSSRSRGFRPFCGWEISGLEAAWPPACPAVSITTAGSRAGTPSCGGTSGSAL 108
P LG +G R ++ +A P A+S AG+R T
Sbjct: 125 RPGPLG------QKGLRISAEETVARGKATEAPKRSALS---AGARRDT----------- 164
Query: 109 VVSGTNPLSPATSNSSLGPSTFTSGGKARPKPGS 142
SG P +P+ + + + T G RP P +
Sbjct: 165 --SGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA 196
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 34.7 bits (78), Expect = 0.036
Identities = 34/110 (30%), Positives = 41/110 (37%), Gaps = 15/110 (13%)
Query: 39 PDPGVRSGPGPPSRLGLSGSSR-SRGFRPFCGWE-ISGLEAAWPPACPAVSITTAGSRAG 96
P+ G + P P + L + SRG P + G WPPA T GS G
Sbjct: 918 PEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPA------TGPGSADG 971
Query: 97 TPSCGGTSGSALVVSGTNPLSPATSNSSLGPSTFTSGGKARPKPGSTLSS 146
+ T G L P GPS TSGGKA G+ SS
Sbjct: 972 LCTIYETEGPESATPAPGALDP-------GPSPGTSGGKAAAGAGAGASS 1014
Score = 26.6 bits (57), Expect = 9.8
Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 35/154 (22%)
Query: 2 LGGSELGVSS--TGALTNVCVGSRDGVSAGPGAWR-----------PEPLPDPGVRSGPG 48
+GG+ + S+ G + SR+ S P + R P P+ PG SG
Sbjct: 65 IGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTT 124
Query: 49 PPSRLGLSGSSRSRGFRPFCGWEISGLEAAWPPACPAVSITTAGSRAGTPSCGGTSGSAL 108
P LG +G R ++ +A P A+S AG+R T
Sbjct: 125 RPGPLG------QKGLRISAEETVARGKATEAPKRSALS---AGARRDT----------- 164
Query: 109 VVSGTNPLSPATSNSSLGPSTFTSGGKARPKPGS 142
SG P +P+ + + + T G RP P +
Sbjct: 165 --SGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA 196
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 34.7 bits (78), Expect = 0.036
Identities = 34/110 (30%), Positives = 41/110 (37%), Gaps = 15/110 (13%)
Query: 39 PDPGVRSGPGPPSRLGLSGSSR-SRGFRPFCGWE-ISGLEAAWPPACPAVSITTAGSRAG 96
P+ G + P P + L + SRG P + G WPPA T GS G
Sbjct: 610 PEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPA------TGPGSADG 663
Query: 97 TPSCGGTSGSALVVSGTNPLSPATSNSSLGPSTFTSGGKARPKPGSTLSS 146
+ T G L P GPS TSGGKA G+ SS
Sbjct: 664 LCTIYETEGPESATPAPGALDP-------GPSPGTSGGKAAAGAGAGASS 706
Score = 30.0 bits (66), Expect = 0.88
Identities = 33/123 (26%), Positives = 45/123 (36%), Gaps = 21/123 (17%)
Query: 22 SRDGVSAGPGAWRPEPLPDPGVRSGPGP--PSRLGLSGSSRSRGFRPFCGWEISGLEAAW 79
+R + PG P P PG P P P+ L + G++ + G +P G+ A
Sbjct: 14 ARTPAARAPGLLTPRP---PGSPRPPPPVTPAALRVLGAAGAVGRKPLAE-RAGGIGGAT 69
Query: 80 PPACPAVSITTAGSRAGTPSCGGTSGSALVVSGTNPLSPATSNSSLGP--STFTSGGKAR 137
P P G T S SG +P N+S GP S + G R
Sbjct: 70 IPE-------------SAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTR 116
Query: 138 PKP 140
P P
Sbjct: 117 PGP 119
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.131 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,531,739
Number of Sequences: 37866
Number of extensions: 532357
Number of successful extensions: 4873
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 369
Number of HSP's that attempted gapping in prelim test: 3016
Number of HSP's gapped (non-prelim): 1977
length of query: 160
length of database: 18,247,518
effective HSP length: 94
effective length of query: 66
effective length of database: 14,688,114
effective search space: 969415524
effective search space used: 969415524
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.