Guide to the Human Genome
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Name: MUC19 Sequence: fasta or formatted (598aa) NCBI GI: 239755778
Description:

PREDICTED: mucin 19, oligomeric

Referenced in:

Mucins

Other entries for this name:
alt mRNA [598aa] PREDICTED: mucin 19
alt mRNA [598aa] PREDICTED: mucin 19, oligomeric
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         33           2
 C cysteine            4.8         29           2
 D aspartate           3.2         19           2
 E glutamate           5.4         32           2
 F phenylalanine       1.5          9           1
 G glycine            11.5         69           2
 H histidine           1.0          6           1
 I isoleucine          4.3         26           2
 K lysine              4.5         27           2
 L leucine             3.3         20           3
 M methionine          0.8          5           1
 N asparagine          3.5         21           2
 P proline             5.7         34           2
 Q glutamine           2.7         16           1
 R arginine            2.7         16           1
 S serine             11.2         67           3
 T threonine          18.7        112           3
 V valine              6.9         41           2
 W tryptophan          0.3          2           1
 Y tyrosine            2.3         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: mucin 19, oligomeric 
MUC19                 1.000   PREDICTED: mucin 19, oligomeric 
MUC19                 1.000   PREDICTED: mucin 19 
MUC5B                 0.068   mucin 5, subtype B, tracheobronchial 
LOC100294249          0.068   PREDICTED: hypothetical protein XP_002344067 
LOC729792             0.067   PREDICTED: hypothetical protein 
LOC729792             0.067   PREDICTED: hypothetical protein 
LOC729792             0.067   PREDICTED: hypothetical protein 
LOC100294501          0.067   PREDICTED: hypothetical protein 
LOC100294238          0.067   PREDICTED: hypothetical protein 
LOC100294204          0.067   PREDICTED: hypothetical protein 
LOC100294136          0.067   PREDICTED: hypothetical protein 
LOC100294091          0.067   PREDICTED: hypothetical protein 
LOC730401             0.067   PREDICTED: hypothetical protein 
MUC2                  0.064   mucin 2 precursor 
LOC100294420          0.064   PREDICTED: similar to mucin 2 
MUC5AC                0.061   mucin 5AC 
MUC21                 0.060   mucin 21 
LOC100287737          0.049   PREDICTED: hypothetical protein XP_002343203 
MUC12                 0.048   PREDICTED: mucin 12 
LOC100293409          0.048   PREDICTED: similar to Mucin-19 
LOC100291118          0.048   PREDICTED: hypothetical protein XP_002347351 
MUC17                 0.048   mucin 17 
MUC12                 0.047   PREDICTED: mucin 12, cell surface associated 
LOC100133790          0.046   PREDICTED: intestinal mucin-like, partial 
MUC3A                 0.046   PREDICTED: mucin 3A, intestinal 
MUC6                  0.044   mucin 6, gastric 
LOC100131514          0.043   PREDICTED: similar to hCG1747327, partial 
MUC12                 0.043   PREDICTED: mucin 12 
KIAA1881              0.043   plasma membrane associated protein, S3-12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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