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Search of human proteins with 239752052
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752052 PREDICTED: hypothetical protein [Homo sapiens]
(435 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757530 PREDICTED: hypothetical protein [Homo sapiens] 866 0.0
gi|239752052 PREDICTED: hypothetical protein [Homo sapiens] 866 0.0
gi|239746535 PREDICTED: hypothetical protein XP_002343755 [Homo ... 720 0.0
gi|239753963 PREDICTED: similar to apopolysialoglycoprotein [Hom... 75 1e-13
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi... 62 1e-09
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi... 62 1e-09
gi|16445033 ACRC protein [Homo sapiens] 52 1e-06
gi|169211436 PREDICTED: hypothetical protein [Homo sapiens] 51 2e-06
gi|116284392 mucin 2 precursor [Homo sapiens] 50 4e-06
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 48 2e-05
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo... 43 5e-04
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo... 43 5e-04
gi|169213985 PREDICTED: similar to hCG2036794 [Homo sapiens] 40 0.005
gi|239751846 PREDICTED: similar to hCG2036794 [Homo sapiens] 40 0.005
gi|239746337 PREDICTED: similar to hCG2036794 [Homo sapiens] 40 0.005
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 39 0.012
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 39 0.012
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 39 0.012
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 39 0.012
gi|46243671 G protein-coupled receptor 152 [Homo sapiens] 39 0.012
gi|38788260 bromodomain PHD finger transcription factor isoform ... 37 0.027
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ... 37 0.027
gi|239749340 PREDICTED: hypothetical protein XP_002347000 [Homo ... 37 0.035
gi|14149981 transmembrane protein 117 [Homo sapiens] 37 0.046
gi|38788274 bromodomain PHD finger transcription factor isoform ... 36 0.078
gi|7662414 inositol polyphosphate-5-phosphatase F [Homo sapiens] 35 0.13
gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens] 34 0.30
gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens] 34 0.30
gi|116008190 myosin light chain kinase isoform 3B [Homo sapiens] 34 0.30
gi|116008188 myosin light chain kinase isoform 2 [Homo sapiens] 34 0.30
>gi|239757530 PREDICTED: hypothetical protein [Homo sapiens]
Length = 435
Score = 866 bits (2238), Expect = 0.0
Identities = 435/435 (100%), Positives = 435/435 (100%)
Query: 1 MKTDLGDKKDSAPGTSEGKGQKTVRSTGFGSVGKNTEHAGWGPMHVCSAARVVGKSDGHP 60
MKTDLGDKKDSAPGTSEGKGQKTVRSTGFGSVGKNTEHAGWGPMHVCSAARVVGKSDGHP
Sbjct: 1 MKTDLGDKKDSAPGTSEGKGQKTVRSTGFGSVGKNTEHAGWGPMHVCSAARVVGKSDGHP 60
Query: 61 SYSSVATDTASLEGMETLVTNGDTIPWLCPSQPLARAELECPQPRTLQLHLLSKAQDALG 120
SYSSVATDTASLEGMETLVTNGDTIPWLCPSQPLARAELECPQPRTLQLHLLSKAQDALG
Sbjct: 61 SYSSVATDTASLEGMETLVTNGDTIPWLCPSQPLARAELECPQPRTLQLHLLSKAQDALG 120
Query: 121 KDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGH 180
KDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGH
Sbjct: 121 KDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGH 180
Query: 181 LVLHGDAYGQTCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIA 240
LVLHGDAYGQTCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIA
Sbjct: 181 LVLHGDAYGQTCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIA 240
Query: 241 TAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQRSDPTDVMQ 300
TAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQRSDPTDVMQ
Sbjct: 241 TAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQRSDPTDVMQ 300
Query: 301 DQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 360
DQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT
Sbjct: 301 DQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 360
Query: 361 DVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQ 420
DVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQ
Sbjct: 361 DVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQ 420
Query: 421 SDPTDVMQDQRLNIP 435
SDPTDVMQDQRLNIP
Sbjct: 421 SDPTDVMQDQRLNIP 435
>gi|239752052 PREDICTED: hypothetical protein [Homo sapiens]
Length = 435
Score = 866 bits (2238), Expect = 0.0
Identities = 435/435 (100%), Positives = 435/435 (100%)
Query: 1 MKTDLGDKKDSAPGTSEGKGQKTVRSTGFGSVGKNTEHAGWGPMHVCSAARVVGKSDGHP 60
MKTDLGDKKDSAPGTSEGKGQKTVRSTGFGSVGKNTEHAGWGPMHVCSAARVVGKSDGHP
Sbjct: 1 MKTDLGDKKDSAPGTSEGKGQKTVRSTGFGSVGKNTEHAGWGPMHVCSAARVVGKSDGHP 60
Query: 61 SYSSVATDTASLEGMETLVTNGDTIPWLCPSQPLARAELECPQPRTLQLHLLSKAQDALG 120
SYSSVATDTASLEGMETLVTNGDTIPWLCPSQPLARAELECPQPRTLQLHLLSKAQDALG
Sbjct: 61 SYSSVATDTASLEGMETLVTNGDTIPWLCPSQPLARAELECPQPRTLQLHLLSKAQDALG 120
Query: 121 KDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGH 180
KDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGH
Sbjct: 121 KDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGH 180
Query: 181 LVLHGDAYGQTCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIA 240
LVLHGDAYGQTCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIA
Sbjct: 181 LVLHGDAYGQTCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIA 240
Query: 241 TAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQRSDPTDVMQ 300
TAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQRSDPTDVMQ
Sbjct: 241 TAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQRSDPTDVMQ 300
Query: 301 DQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 360
DQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT
Sbjct: 301 DQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 360
Query: 361 DVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQ 420
DVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQ
Sbjct: 361 DVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQ 420
Query: 421 SDPTDVMQDQRLNIP 435
SDPTDVMQDQRLNIP
Sbjct: 421 SDPTDVMQDQRLNIP 435
>gi|239746535 PREDICTED: hypothetical protein XP_002343755 [Homo
sapiens]
Length = 370
Score = 720 bits (1858), Expect = 0.0
Identities = 360/368 (97%), Positives = 365/368 (99%), Gaps = 1/368 (0%)
Query: 1 MKTDLGDKKDSAPGTSEGKGQKTVRSTGFGSVGKNTEHAGWGPMHVCSAARVVGKSDGHP 60
MKTDLGDKKDSAPGTSEGKGQKTVRSTGFGSVGKNTEHAGWGPMHVCSAARVVGKSDGHP
Sbjct: 1 MKTDLGDKKDSAPGTSEGKGQKTVRSTGFGSVGKNTEHAGWGPMHVCSAARVVGKSDGHP 60
Query: 61 SYSSVATDTASLEGMETLVTNGDTIPWLCPSQPLARAELECPQPRTLQLHLLSKAQDALG 120
SYSSVATDTASLEGMETLVTNGDTIPWLCPSQPLARAELECPQPRTLQLHLLSKAQDALG
Sbjct: 61 SYSSVATDTASLEGMETLVTNGDTIPWLCPSQPLARAELECPQPRTLQLHLLSKAQDALG 120
Query: 121 KDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGH 180
KDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGH
Sbjct: 121 KDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGH 180
Query: 181 LVLHGDAYGQTCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIA 240
LVLHGDAYGQTCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIA
Sbjct: 181 LVLHGDAYGQTCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIA 240
Query: 241 TAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQRSDPTDVMQ 300
TAQSDPTDVMQDQSIATAQSDP DVMQD+SIATAQSDPTDVMQD+SIATAQ SDPTDVMQ
Sbjct: 241 TAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTDVMQDRSIATAQ-SDPTDVMQ 299
Query: 301 DQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 360
D+SIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT
Sbjct: 300 DRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 359
Query: 361 DVMQDRSI 368
DVMQD+ +
Sbjct: 360 DVMQDQRL 367
Score = 277 bits (709), Expect = 1e-74
Identities = 146/150 (97%), Positives = 147/150 (98%), Gaps = 1/150 (0%)
Query: 286 SIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTD 345
SIATAQ SDP DVMQDQSIATAQSDPTDVMQDQSIATAQSDP DVMQDRSIATAQSDPTD
Sbjct: 222 SIATAQ-SDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPMDVMQDRSIATAQSDPTD 280
Query: 346 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQS 405
VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQD+SIATAQSDPTDVMQDRSIATAQS
Sbjct: 281 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQS 340
Query: 406 DPTDVMQDRSIATAQSDPTDVMQDQRLNIP 435
DPTDVMQDRSIATAQSDPTDVMQDQRLNIP
Sbjct: 341 DPTDVMQDRSIATAQSDPTDVMQDQRLNIP 370
>gi|239753963 PREDICTED: similar to apopolysialoglycoprotein [Homo
sapiens]
Length = 538
Score = 75.1 bits (183), Expect = 1e-13
Identities = 64/223 (28%), Positives = 92/223 (41%), Gaps = 44/223 (19%)
Query: 217 PTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQS 276
P S A + DP D M + A + P D M + A + P D M + A +
Sbjct: 153 PADTMSEAVQRRDPADTMSE---AVQRRHPADTMSE---AAQRRHPADTMSE---AAQRR 203
Query: 277 DPTDVMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQD----------QSIATAQSD 326
DP D M + AQR DP D + + A + DP D M + S A + D
Sbjct: 204 DPADTMSE----AAQRRDPADTISE---AAQRRDPADTMSEAAQRRHPADTMSEAAQRRD 256
Query: 327 PTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIAT 386
P D + + A + DP D M + A + DP D + + A + DP D M + A
Sbjct: 257 PADTISE---AAQRRDPADTMSE---AAQRRDPADTISE---AAQRRDPADTMSE---AA 304
Query: 387 AQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQD 429
+ P D M + A + DP D M + A + DP D M +
Sbjct: 305 QRRHPADTMSE---AAQRRDPADTMSE---AAQRRDPADTMSE 341
Score = 73.9 bits (180), Expect = 3e-13
Identities = 64/223 (28%), Positives = 91/223 (40%), Gaps = 44/223 (19%)
Query: 217 PTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQS 276
P S A + DP D M + A + P D M + A + DP D + + A +
Sbjct: 218 PADTISEAAQRRDPADTMSE---AAQRRHPADTMSE---AAQRRDPADTISE---AAQRR 268
Query: 277 DPTDVMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQD----------QSIATAQSD 326
DP D M + AQR DP D + + A + DP D M + S A + D
Sbjct: 269 DPADTMSE----AAQRRDPADTISE---AAQRRDPADTMSEAAQRRHPADTMSEAAQRRD 321
Query: 327 PTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIAT 386
P D M + A + DP D M + A + P D M + A + P D M + A
Sbjct: 322 PADTMSE---AAQRRDPADTMSE---AVQRRHPADTMSE---AVQRRHPADTMSE---AA 369
Query: 387 AQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQD 429
+ DP D M + A + P D M + A + DP D M +
Sbjct: 370 QRRDPADTMSE---AAQRRHPADTMSE---AAQRRDPADTMSE 406
Score = 70.9 bits (172), Expect = 2e-12
Identities = 63/217 (29%), Positives = 90/217 (41%), Gaps = 32/217 (14%)
Query: 217 PTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQS 276
P S A + P D M + A + DP D M + A + P D M + A +
Sbjct: 348 PADTMSEAVQRRHPADTMSE---AAQRRDPADTMSE---AAQRRHPADTMSE---AAQRR 398
Query: 277 DPTDVMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSI 336
DP D M + AQR P D M + A + P D M + A + DP D M +
Sbjct: 399 DPADTMSE----AAQRRHPADTMSE---AAQRRHPADTMSE---AAQRRDPADTMSE--- 445
Query: 337 ATAQSDPTDVMQDRSIATAQSDPT-DVMQDRSIATAQSDPT---DVMQDRSIATAQSDPT 392
A + DP D M + + +D T + +Q R A S+ D+ S A + DP
Sbjct: 446 AAQRRDPADTMSEAAQRRHPADTTSEAVQRRHPADPMSEAAQRRDLADTMSEAAQRRDPE 505
Query: 393 DVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQD 429
D M + A + DP D M + A + DP D M +
Sbjct: 506 DTMSE---AAQRRDPADAMSE---AAQRRDPEDTMSE 536
>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 62.0 bits (149), Expect = 1e-09
Identities = 60/204 (29%), Positives = 66/204 (32%), Gaps = 11/204 (5%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTD 280
T T + P T S PT + Q I T S PT T + PT
Sbjct: 55 TPTLTPSNTPTLTPSSTPTLTPSSTPT--LTPQPILTRSSTPTLTPSSPPTLTPSNTPTL 112
Query: 281 VMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQ 340
+ T + PT T S PT + I T S PT R I T
Sbjct: 113 TPSNTPTLTPSNT-PTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTRS 171
Query: 341 SDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSI 400
S PT T S PT T S PT R I T S PT R I
Sbjct: 172 STPTLTPSSTPTLTPSSTPT--------LTPSSTPTLTPSSRPILTRSSTPTLTPSSRPI 223
Query: 401 ATAQSDPTDVMQDRSIATAQSDPT 424
T S PT R I T S PT
Sbjct: 224 LTPSSTPTLTPSSRPILTRSSTPT 247
Score = 57.8 bits (138), Expect = 2e-08
Identities = 60/214 (28%), Positives = 67/214 (31%), Gaps = 15/214 (7%)
Query: 225 TAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDP------ 278
T S P Q I T S PT T + PT + T S P
Sbjct: 19 TPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSS 78
Query: 279 TDVMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIAT 338
T + Q I T + S PT T + PT + T + PT T
Sbjct: 79 TPTLTPQPILT-RSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLT 137
Query: 339 AQSDPTDVMQDRSIATAQSDPTDVMQDRSI--------ATAQSDPTDVMQDRSIATAQSD 390
S PT R I T S PT R I T S PT T S
Sbjct: 138 PSSTPTLTPSSRPILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSST 197
Query: 391 PTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 424
PT R I T S PT R I T S PT
Sbjct: 198 PTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPT 231
Score = 57.4 bits (137), Expect = 3e-08
Identities = 55/200 (27%), Positives = 64/200 (32%), Gaps = 9/200 (4%)
Query: 225 TAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQD 284
T + P + T + PT T S PT + I T S PT
Sbjct: 105 TPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSS 164
Query: 285 QSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPT 344
+ I T + S PT T S PT T S PT R I T S PT
Sbjct: 165 RPILT-RSSTPTLTPSSTPTLTPSSTPT--------LTPSSTPTLTPSSRPILTRSSTPT 215
Query: 345 DVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQ 404
R I T S PT R I T S PT T + PT + T
Sbjct: 216 LTPSSRPILTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPS 275
Query: 405 SDPTDVMQDRSIATAQSDPT 424
+ PT T S PT
Sbjct: 276 NTPTLTPSSTPTLTPSSTPT 295
Score = 42.7 bits (99), Expect = 6e-04
Identities = 51/192 (26%), Positives = 59/192 (30%), Gaps = 27/192 (14%)
Query: 241 TAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQRSDPTDVMQ 300
T + PT T S PT Q I T S PT S PT
Sbjct: 3 TPSNTPTLTPSSPPTLTPSSTPTLTPSSQPILTRSSTPT---------LTPSSPPTLTPS 53
Query: 301 DQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 360
+ T + PT T S PT + + I T S PT T S PT
Sbjct: 54 NTPTLTPSNTPTLTPSSTPTLTPSSTPT--LTPQPILTRSSTPT--------LTPSSPPT 103
Query: 361 DVMQDRSIATAQSDPTDVMQD--------RSIATAQSDPTDVMQDRSIATAQSDPTDVMQ 412
+ T + PT + T S PT R I T S PT
Sbjct: 104 LTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPS 163
Query: 413 DRSIATAQSDPT 424
R I T S PT
Sbjct: 164 SRPILTRSSTPT 175
>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 62.0 bits (149), Expect = 1e-09
Identities = 60/204 (29%), Positives = 66/204 (32%), Gaps = 11/204 (5%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTD 280
T T + P T S PT + Q I T S PT T + PT
Sbjct: 55 TPTLTPSNTPTLTPSSTPTLTPSSTPT--LTPQPILTRSSTPTLTPSSPPTLTPSNTPTL 112
Query: 281 VMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQ 340
+ T + PT T S PT + I T S PT R I T
Sbjct: 113 TPSNTPTLTPSNT-PTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTRS 171
Query: 341 SDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSI 400
S PT T S PT T S PT R I T S PT R I
Sbjct: 172 STPTLTPSSTPTLTPSSTPT--------LTPSSTPTLTPSSRPILTRSSTPTLTPSSRPI 223
Query: 401 ATAQSDPTDVMQDRSIATAQSDPT 424
T S PT R I T S PT
Sbjct: 224 LTPSSTPTLTPSSRPILTRSSTPT 247
Score = 57.8 bits (138), Expect = 2e-08
Identities = 60/214 (28%), Positives = 67/214 (31%), Gaps = 15/214 (7%)
Query: 225 TAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDP------ 278
T S P Q I T S PT T + PT + T S P
Sbjct: 19 TPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSS 78
Query: 279 TDVMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIAT 338
T + Q I T + S PT T + PT + T + PT T
Sbjct: 79 TPTLTPQPILT-RSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLT 137
Query: 339 AQSDPTDVMQDRSIATAQSDPTDVMQDRSI--------ATAQSDPTDVMQDRSIATAQSD 390
S PT R I T S PT R I T S PT T S
Sbjct: 138 PSSTPTLTPSSRPILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSST 197
Query: 391 PTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 424
PT R I T S PT R I T S PT
Sbjct: 198 PTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPT 231
Score = 57.4 bits (137), Expect = 3e-08
Identities = 55/200 (27%), Positives = 64/200 (32%), Gaps = 9/200 (4%)
Query: 225 TAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQD 284
T + P + T + PT T S PT + I T S PT
Sbjct: 105 TPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSS 164
Query: 285 QSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPT 344
+ I T + S PT T S PT T S PT R I T S PT
Sbjct: 165 RPILT-RSSTPTLTPSSTPTLTPSSTPT--------LTPSSTPTLTPSSRPILTRSSTPT 215
Query: 345 DVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQ 404
R I T S PT R I T S PT T + PT + T
Sbjct: 216 LTPSSRPILTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPS 275
Query: 405 SDPTDVMQDRSIATAQSDPT 424
+ PT T S PT
Sbjct: 276 NTPTLTPSSTPTLTPSSTPT 295
Score = 42.7 bits (99), Expect = 6e-04
Identities = 51/192 (26%), Positives = 59/192 (30%), Gaps = 27/192 (14%)
Query: 241 TAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQRSDPTDVMQ 300
T + PT T S PT Q I T S PT S PT
Sbjct: 3 TPSNTPTLTPSSPPTLTPSSTPTLTPSSQPILTRSSTPT---------LTPSSPPTLTPS 53
Query: 301 DQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 360
+ T + PT T S PT + + I T S PT T S PT
Sbjct: 54 NTPTLTPSNTPTLTPSSTPTLTPSSTPT--LTPQPILTRSSTPT--------LTPSSPPT 103
Query: 361 DVMQDRSIATAQSDPTDVMQD--------RSIATAQSDPTDVMQDRSIATAQSDPTDVMQ 412
+ T + PT + T S PT R I T S PT
Sbjct: 104 LTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPS 163
Query: 413 DRSIATAQSDPT 424
R I T S PT
Sbjct: 164 SRPILTRSSTPT 175
>gi|16445033 ACRC protein [Homo sapiens]
Length = 691
Score = 52.0 bits (123), Expect = 1e-06
Identities = 68/284 (23%), Positives = 107/284 (37%), Gaps = 26/284 (9%)
Query: 142 STAEKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGHLV-LHGDAYGQTCIHIHCFKL 200
S+ + +Q +S ID ++ CH ++K L+ ++ D C H+
Sbjct: 62 SSVARRAPKRQASSVVVIDSDSD----EECHTHEEKKAKLLEINSDDESPECCHVKPAIQ 117
Query: 201 SQKLSL-----DKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIATAQSD-PTDVMQDQS 254
+ + D + ++ P + + A D D + + S+ P D D
Sbjct: 118 EPPIVISDDDNDDDNGNDLEVPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSE 177
Query: 255 IATAQSDPTDVMQDQSIATAQS---DPTDVMQDQSIATAQRSDPTDVMQDQSIATAQSDP 311
SD +DV D S ++ D +D D S +SD +DV D S SD
Sbjct: 178 APDDNSDDSDVPDDNSDDSSDDNSDDSSDDNSDDSDVPDDKSDDSDVPDDSS---DDSDV 234
Query: 312 TDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATA 371
D D S A S D S +++ P D D SD ++ D S +
Sbjct: 235 PDDSSDDSEAPDDSSDDSEAPDDSSDDSEA-PDDSSDDSEAPDDSSDDSEASDDSSDDSE 293
Query: 372 QSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRS 415
SD D D +SD +DV +D+ SD +DV D S
Sbjct: 294 ASD--DSSDDSEAPDDKSDDSDVPEDK------SDDSDVPDDNS 329
Score = 49.7 bits (117), Expect = 5e-06
Identities = 52/213 (24%), Positives = 82/213 (38%), Gaps = 16/213 (7%)
Query: 230 PMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQS----IATAQSDPTDVMQDQ 285
P D D SD +DV D S ++ + D D S + +SD +DV D
Sbjct: 169 PDDNSDDSEAPDDNSDDSDVPDDNSDDSSDDNSDDSSDDNSDDSDVPDDKSDDSDVPDDS 228
Query: 286 SIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSD-----PTDVMQDRSIATAQ 340
S + D +D + ++ S+ D D S A S P D D +
Sbjct: 229 SDDSDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEASDDS 288
Query: 341 SDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT-DVMQDRS 399
SD ++ D S P D D + +SD +DV D S P D+ +
Sbjct: 289 SDDSEASDDSS--DDSEAPDDKSDDSDVPEDKSDDSDVPDDNSDDLEVPVPAEDLCNEGQ 346
Query: 400 IATAQSDPTDVMQDRSIATAQSDPTDVMQDQRL 432
IA+ + + + + + A +Q D +D +Q L
Sbjct: 347 IASDEEE----LVEAAAAVSQHDSSDDAGEQDL 375
>gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 280
Score = 50.8 bits (120), Expect = 2e-06
Identities = 56/205 (27%), Positives = 60/205 (29%), Gaps = 11/205 (5%)
Query: 221 TSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTD 280
T T S P + T S PT T S PT T S PT
Sbjct: 75 TPTLTPCSTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPT- 133
Query: 281 VMQDQSIATAQRSD-PTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATA 339
+ S T RS PT T S PT T S PT R I T
Sbjct: 134 -LTPSSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTR 192
Query: 340 QSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRS 399
S PT T S PT T + PT + T S PT R
Sbjct: 193 SSTPTLTPSSTPTLTPSSTPT--------LTPSNTPTLIPSSTPTLTPSSTPTLTPSSRP 244
Query: 400 IATAQSDPTDVMQDRSIATAQSDPT 424
T S PT T S PT
Sbjct: 245 TLTRSSTPTLTPSSTPTLTPSSTPT 269
Score = 43.1 bits (100), Expect = 5e-04
Identities = 45/168 (26%), Positives = 47/168 (27%), Gaps = 9/168 (5%)
Query: 257 TAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQ 316
T S PT + T S PT S PT + T S PT
Sbjct: 55 TPSSPPTLTPSNTPTLTPCSTPT---------LTPCSTPTLTPSNTPTLTPSSTPTLTPS 105
Query: 317 DQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 376
T S PT T S PT T S PT T S PT
Sbjct: 106 STPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTPTLTPSSTPT 165
Query: 377 DVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 424
T S PT R I T S PT T S PT
Sbjct: 166 LTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPT 213
Score = 42.7 bits (99), Expect = 6e-04
Identities = 47/184 (25%), Positives = 50/184 (27%), Gaps = 9/184 (4%)
Query: 241 TAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQRSDPTDVMQ 300
T S PT + T S PT T + PT S PT
Sbjct: 55 TPSSPPTLTPSNTPTLTPCSTPTLTPCSTPTLTPSNTPT---------LTPSSTPTLTPS 105
Query: 301 DQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 360
T S PT T S PT T S PT T S PT
Sbjct: 106 STPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTPTLTPSSTPT 165
Query: 361 DVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQ 420
T S PT R I T S PT T S PT +
Sbjct: 166 LTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSNTPTLIPS 225
Query: 421 SDPT 424
S PT
Sbjct: 226 STPT 229
Score = 33.9 bits (76), Expect = 0.30
Identities = 33/130 (25%), Positives = 35/130 (26%)
Query: 295 PTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIAT 354
PT T + PT T S PT + T S PT T
Sbjct: 52 PTLTPSSPPTLTPSNTPTLTPCSTPTLTPCSTPTLTPSNTPTLTPSSTPTLTPSSTPTLT 111
Query: 355 AQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDR 414
S PT T S PT T S PT T S PT
Sbjct: 112 PSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSST 171
Query: 415 SIATAQSDPT 424
T S PT
Sbjct: 172 PTLTPSSTPT 181
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 50.1 bits (118), Expect = 4e-06
Identities = 54/211 (25%), Positives = 61/211 (28%), Gaps = 6/211 (2%)
Query: 217 PTGKTSI--ATAQSDPMDVMQDQSIATAQSDPTDVMQDQ-SIATAQSDPTDVMQDQSIAT 273
PT T++ T S P T S PT +I T PT + T
Sbjct: 1550 PTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTT 1609
Query: 274 AQSDPTDVMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQD 333
PT + T + PT T PT T S PT
Sbjct: 1610 TTPPPTTTPSPPT--TTPITPPTSTTTLPPTTTPSPPPTTTTTPPP-TTTPSPPTTTTPS 1666
Query: 334 RSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTD 393
I T + P I T S PT M S T S P S T S P
Sbjct: 1667 PPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPT 1726
Query: 394 VMQDRSIATAQSDPTDVMQDRSIATAQSDPT 424
M S T S PT M T S T
Sbjct: 1727 TMTTPSPTTTPSPPTTTMTTLPPTTTSSPLT 1757
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/205 (24%), Positives = 54/205 (26%), Gaps = 6/205 (2%)
Query: 225 TAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQD 284
T + P T S PT T S PT T S PT
Sbjct: 1568 TTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 1627
Query: 285 QSIATAQR------SDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIAT 338
+T S P T S PT I T + P I T
Sbjct: 1628 PPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITT 1687
Query: 339 AQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDR 398
S PT M S T S P S T S P M S T S PT M
Sbjct: 1688 TPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTL 1747
Query: 399 SIATAQSDPTDVMQDRSIATAQSDP 423
T S T SI P
Sbjct: 1748 PPTTTSSPLTTTPLPPSITPPTFSP 1772
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 48.1 bits (113), Expect = 2e-05
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 8/206 (3%)
Query: 220 KTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPT 279
K+ +SD D D S ++ SD +D S + S +D S ++ SD +
Sbjct: 539 KSDSGKGKSDSSD--SDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSS 596
Query: 280 DVMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATA 339
D S ++ SD +D + ++SD + D S + ++SD +D S +
Sbjct: 597 D--SSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNS 654
Query: 340 QSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRS 399
S + + S ++ SD +D S ++ SD +D D S ++ SD +D S
Sbjct: 655 DSSDSSNSSNSSDSSDSSDSSD-SSSSSDSSNSSDSSD-SSDSSNSSESSDSSD--SSDS 710
Query: 400 IATAQSDPTDVMQDRSIATAQSDPTD 425
++ SD ++ S ++ SD +D
Sbjct: 711 DSSDSSDSSNSNSSDSDSSNSSDSSD 736
Score = 46.6 bits (109), Expect = 4e-05
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 6/211 (2%)
Query: 218 TGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDV-MQDQSIATAQS 276
+ +S ++ SD D + ++SD + D S + ++SD +D D S + S
Sbjct: 598 SSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSS 657
Query: 277 DPTDVMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSI 336
D ++ + + S + D S ++ SD +D + S ++ SD +D S
Sbjct: 658 DSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSD-SSNSSESSDSSDSSDSDSSDSS 716
Query: 337 ATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQ 396
++ S+ +D S ++ S + D S ++ SD +D D S ++ SD +D
Sbjct: 717 DSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSD-SSDSSNSSDSSDSSD-SS 774
Query: 397 DRSIATAQSDPTDV--MQDRSIATAQSDPTD 425
D S ++ SD D D S ++ SD ++
Sbjct: 775 DSSDSSNSSDSNDSSNSSDSSDSSNSSDSSN 805
Score = 46.6 bits (109), Expect = 4e-05
Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 7/200 (3%)
Query: 226 AQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQ 285
++SD D S + ++SD +D S + S + + S ++ SD +D
Sbjct: 622 SKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSS 681
Query: 286 SIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTD 345
+ + S + + S ++ SD +D S ++ S+ +D S ++ S +
Sbjct: 682 DSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSS 741
Query: 346 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQS 405
D S ++ SD +D D S ++ SD +D D S ++ SD D S ++ S
Sbjct: 742 DSSDSSDSSNSSDSSD-SSDSSNSSDSSDSSD-SSDSSDSSNSSDSND-----SSNSSDS 794
Query: 406 DPTDVMQDRSIATAQSDPTD 425
+ D S ++ SD +D
Sbjct: 795 SDSSNSSDSSNSSDSSDSSD 814
Score = 40.8 bits (94), Expect = 0.002
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 12/175 (6%)
Query: 260 SDPTDVMQDQSIATAQSDPTDVM---------QDQSIATAQRSDPTDVMQDQSIATAQSD 310
SD D S +T+ ++ +D D+S + +SD +D D S ++ SD
Sbjct: 505 SDSKGAEDDDSDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSD--SDSSDSSNSSD 562
Query: 311 PTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIAT 370
+D S + S +D S ++ SD +D + S ++ SD +D +
Sbjct: 563 SSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSD-SSNSSDSSDSSDSSDSSDSSDSSD 621
Query: 371 AQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTD 425
++SD + D S + ++SD +D S + S + + S ++ SD +D
Sbjct: 622 SKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSD 676
Score = 36.6 bits (83), Expect = 0.046
Identities = 41/203 (20%), Positives = 81/203 (39%), Gaps = 6/203 (2%)
Query: 226 AQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQ 285
+ SD D + DP + A S+ + + A+ SD + +
Sbjct: 445 SNSDGYDSYDFDDKSMQGDDPNSSDESNGNDDANSESDNNSSSRGDASYNSDESKDNGNG 504
Query: 286 SIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATA---QSDPTDVMQDRSIATAQSD 342
S + D +D D + + + + + D + + +SD +D D S ++ SD
Sbjct: 505 SDSKGAEDDDSDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSD--SDSSDSSNSSD 562
Query: 343 PTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIAT 402
+D S + S +D S ++ SD +D + S ++ SD +D +
Sbjct: 563 SSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSD-SSNSSDSSDSSDSSDSSDSSDSSD 621
Query: 403 AQSDPTDVMQDRSIATAQSDPTD 425
++SD + D S + ++SD +D
Sbjct: 622 SKSDSSKSESDSSDSDSKSDSSD 644
>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
sapiens]
Length = 1077
Score = 43.1 bits (100), Expect = 5e-04
Identities = 47/165 (28%), Positives = 64/165 (38%), Gaps = 15/165 (9%)
Query: 217 PTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQS 276
P G I ++ PM Q Q A AQ+ Q Q+ A AQ+ Q Q+ A AQ+
Sbjct: 162 PDGVKVIQQSELTPMLAAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQA 221
Query: 277 DPTDVMQDQSIATAQRSDPTDVM-----QDQSIATAQSDPTDVMQDQSIATAQSDPTDVM 331
Q Q+ A AQ V Q Q+ A S PT +++T+ S T
Sbjct: 222 QAQAQAQAQAQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSS 281
Query: 332 QDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 376
+ TA S+A S PT Q S A + + PT
Sbjct: 282 TTSTTTTA----------TSVAQTVSTPTTQDQTPSSAVSVATPT 316
Score = 36.6 bits (83), Expect = 0.046
Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 6/159 (3%)
Query: 272 ATAQSDPTDVMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVM 331
A + D V+Q + + Q Q+ A AQ+ Q Q+ A AQ+
Sbjct: 158 AWTKPDGVKVIQQSELTPMLAAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQA 217
Query: 332 QDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTD------VMQDRSIA 385
Q ++ A AQ+ Q ++ A AQ Q ++ A S PT V S +
Sbjct: 218 QAQAQAQAQAQAQAQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSS 277
Query: 386 TAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 424
T S + S+A S PT Q S A + + PT
Sbjct: 278 TPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPT 316
>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
sapiens]
Length = 1098
Score = 43.1 bits (100), Expect = 5e-04
Identities = 47/165 (28%), Positives = 64/165 (38%), Gaps = 15/165 (9%)
Query: 217 PTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQS 276
P G I ++ PM Q Q A AQ+ Q Q+ A AQ+ Q Q+ A AQ+
Sbjct: 162 PDGVKVIQQSELTPMLAAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQA 221
Query: 277 DPTDVMQDQSIATAQRSDPTDVM-----QDQSIATAQSDPTDVMQDQSIATAQSDPTDVM 331
Q Q+ A AQ V Q Q+ A S PT +++T+ S T
Sbjct: 222 QAQAQAQAQAQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSS 281
Query: 332 QDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 376
+ TA S+A S PT Q S A + + PT
Sbjct: 282 TTSTTTTA----------TSVAQTVSTPTTQDQTPSSAVSVATPT 316
Score = 36.6 bits (83), Expect = 0.046
Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 6/159 (3%)
Query: 272 ATAQSDPTDVMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVM 331
A + D V+Q + + Q Q+ A AQ+ Q Q+ A AQ+
Sbjct: 158 AWTKPDGVKVIQQSELTPMLAAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQA 217
Query: 332 QDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTD------VMQDRSIA 385
Q ++ A AQ+ Q ++ A AQ Q ++ A S PT V S +
Sbjct: 218 QAQAQAQAQAQAQAQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSS 277
Query: 386 TAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 424
T S + S+A S PT Q S A + + PT
Sbjct: 278 TPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPT 316
>gi|169213985 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 39.7 bits (91), Expect = 0.005
Identities = 40/209 (19%), Positives = 77/209 (36%), Gaps = 7/209 (3%)
Query: 225 TAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQD 284
T +P + S+ T D T+ + T + + + S+ T+ S+ D+ +
Sbjct: 64 TPYPEPSKLPHTVSLETFPLDFTEPLNPDLRETPHPESPETPKADSLTTSISESLDMPKT 123
Query: 285 Q--SIATAQRSD-----PTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIA 337
+A + S+ PT++ S T + + + + + T +D S
Sbjct: 124 NLSKMAHPESSETPTPGPTEMPHPGSPETPKPNFSKTSRPEFPETPNTDLMQTTPQESPE 183
Query: 338 TAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQD 397
Q + T+V Q T+ ++PT +S + T+ + DP+
Sbjct: 184 ILQLNATEVSQAELPETSNTNPTKTPDPKSPEKHDLNSTETPNSEFLQALHPDPSKTPHP 243
Query: 398 RSIATAQSDPTDVMQDRSIATAQSDPTDV 426
S T PT++ Q T + TDV
Sbjct: 244 ESHVTHNPSPTEISQTEFPTTYYQNATDV 272
>gi|239751846 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 39.7 bits (91), Expect = 0.005
Identities = 40/209 (19%), Positives = 77/209 (36%), Gaps = 7/209 (3%)
Query: 225 TAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQD 284
T +P + S+ T D T+ + T + + + S+ T+ S+ D+ +
Sbjct: 64 TPYPEPSKLPHTVSLETFPLDFTEPLNPDLRETPHPESPETPKADSLTTSISESLDMPKT 123
Query: 285 Q--SIATAQRSD-----PTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIA 337
+A + S+ PT++ S T + + + + + T +D S
Sbjct: 124 NLSKMAHPESSETPTPGPTEMPHPGSPETPKPNFSKTSRPEFPETPNTDLMQTTPQESPE 183
Query: 338 TAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQD 397
Q + T+V Q T+ ++PT +S + T+ + DP+
Sbjct: 184 ILQLNATEVSQAELPETSNTNPTKTPDPKSPEKHDLNSTETPNSEFLQALHPDPSKTPHP 243
Query: 398 RSIATAQSDPTDVMQDRSIATAQSDPTDV 426
S T PT++ Q T + TDV
Sbjct: 244 ESHVTHNPSPTEISQTEFPTTYYQNATDV 272
>gi|239746337 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 39.7 bits (91), Expect = 0.005
Identities = 40/209 (19%), Positives = 77/209 (36%), Gaps = 7/209 (3%)
Query: 225 TAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQD 284
T +P + S+ T D T+ + T + + + S+ T+ S+ D+ +
Sbjct: 64 TPYPEPSKLPHTVSLETFPLDFTEPLNPDLRETPHPESPETPKADSLTTSISESLDMPKT 123
Query: 285 Q--SIATAQRSD-----PTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIA 337
+A + S+ PT++ S T + + + + + T +D S
Sbjct: 124 NLSKMAHPESSETPTPGPTEMPHPGSPETPKPNFSKTSRPEFPETPNTDLMQTTPQESPE 183
Query: 338 TAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQD 397
Q + T+V Q T+ ++PT +S + T+ + DP+
Sbjct: 184 ILQLNATEVSQAELPETSNTNPTKTPDPKSPEKHDLNSTETPNSEFLQALHPDPSKTPHP 243
Query: 398 RSIATAQSDPTDVMQDRSIATAQSDPTDV 426
S T PT++ Q T + TDV
Sbjct: 244 ESHVTHNPSPTEISQTEFPTTYYQNATDV 272
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 38.5 bits (88), Expect = 0.012
Identities = 35/208 (16%), Positives = 67/208 (32%), Gaps = 2/208 (0%)
Query: 217 PTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQS 276
PT S T +P + T +P + T +P ++ + T +
Sbjct: 288 PTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKE 347
Query: 277 DPTDVMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSI 336
+ + T + PT + T + PT ++ + T +S PT ++ +
Sbjct: 348 PAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPT-TPKEPAPTTTKSAPT-TTKEPAP 405
Query: 337 ATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQ 396
T +S PT + T + PT + + PT + + PT +
Sbjct: 406 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKK 465
Query: 397 DRSIATAQSDPTDVMQDRSIATAQSDPT 424
+ PT + + PT
Sbjct: 466 PAPTTPKEPAPTTPKETAPTTPKKLTPT 493
Score = 34.7 bits (78), Expect = 0.17
Identities = 36/219 (16%), Positives = 67/219 (30%), Gaps = 16/219 (7%)
Query: 217 PTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQD-----QSIATAQSDPTDVMQDQSI 271
PT T A + P ++ + T +S PT + +S T +P +
Sbjct: 216 PTPTTPKEPASTTP----KEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPA 271
Query: 272 ATAQSDPTDVMQDQSIATAQRSDPTDVMQ------DQSIATAQSDPTDVMQDQSIATAQS 325
T +P + T +S PT + + T +P + T
Sbjct: 272 PTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPK 331
Query: 326 DPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIA 385
+P ++ + T +P + T +P T +P+
Sbjct: 332 EPAPTTKEPA-PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAP 390
Query: 386 TAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 424
T ++ + T +S PT + T + PT
Sbjct: 391 TTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPT 429
Score = 33.1 bits (74), Expect = 0.51
Identities = 50/279 (17%), Positives = 97/279 (34%), Gaps = 31/279 (11%)
Query: 145 EKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGHLVLHGDAYGQTCIHIHCFKLSQKL 204
+K++ K+ T +P + EA G G + G + T + S K+
Sbjct: 70 KKNRTKKKPTPKPPVVDEA---------GSGLDNGDFKVTTPDTSTT--QHNKVSTSPKI 118
Query: 205 SLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTD 264
+ K + P T++ + V ++ ++ T ++ T+ Q+ + T
Sbjct: 119 TTAKPINPRPSLPPNSD---TSKETSLTVNKETTVETKETTTTN---KQTSTDGKEKTTS 172
Query: 265 VMQDQSIATAQSDPTDVMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQ 324
+ QSI + + S A+ + + T +PT + +T
Sbjct: 173 AKETQSIEKTSAKD---LAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTP 229
Query: 325 SDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSI 384
+PT T +S PT ++ + T +S PT + T + PT +
Sbjct: 230 KEPTPT-------TIKSAPT-TPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPT 281
Query: 385 ATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDP 423
T + PT +S T +P + T +P
Sbjct: 282 TTKEPAPTTT---KSAPTTPKEPAPTTPKKPAPTTPKEP 317
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 38.5 bits (88), Expect = 0.012
Identities = 35/208 (16%), Positives = 67/208 (32%), Gaps = 2/208 (0%)
Query: 217 PTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQS 276
PT S T +P + T +P + T +P ++ + T +
Sbjct: 329 PTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKE 388
Query: 277 DPTDVMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSI 336
+ + T + PT + T + PT ++ + T +S PT ++ +
Sbjct: 389 PAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPT-TPKEPAPTTTKSAPT-TTKEPAP 446
Query: 337 ATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQ 396
T +S PT + T + PT + + PT + + PT +
Sbjct: 447 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKK 506
Query: 397 DRSIATAQSDPTDVMQDRSIATAQSDPT 424
+ PT + + PT
Sbjct: 507 PAPTTPKEPAPTTPKETAPTTPKKLTPT 534
Score = 34.7 bits (78), Expect = 0.17
Identities = 36/219 (16%), Positives = 67/219 (30%), Gaps = 16/219 (7%)
Query: 217 PTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQD-----QSIATAQSDPTDVMQDQSI 271
PT T A + P ++ + T +S PT + +S T +P +
Sbjct: 257 PTPTTPKEPASTTP----KEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPA 312
Query: 272 ATAQSDPTDVMQDQSIATAQRSDPTDVMQ------DQSIATAQSDPTDVMQDQSIATAQS 325
T +P + T +S PT + + T +P + T
Sbjct: 313 PTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPK 372
Query: 326 DPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIA 385
+P ++ + T +P + T +P T +P+
Sbjct: 373 EPAPTTKEPA-PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAP 431
Query: 386 TAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 424
T ++ + T +S PT + T + PT
Sbjct: 432 TTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPT 470
Score = 33.1 bits (74), Expect = 0.51
Identities = 50/279 (17%), Positives = 97/279 (34%), Gaps = 31/279 (11%)
Query: 145 EKSQVHKQVTSRPQIDGEAAVWTISSCHGKGKEKGHLVLHGDAYGQTCIHIHCFKLSQKL 204
+K++ K+ T +P + EA G G + G + T + S K+
Sbjct: 111 KKNRTKKKPTPKPPVVDEA---------GSGLDNGDFKVTTPDTSTT--QHNKVSTSPKI 159
Query: 205 SLDKNLTGEVCFPTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTD 264
+ K + P T++ + V ++ ++ T ++ T+ Q+ + T
Sbjct: 160 TTAKPINPRPSLPPNSD---TSKETSLTVNKETTVETKETTTTN---KQTSTDGKEKTTS 213
Query: 265 VMQDQSIATAQSDPTDVMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQ 324
+ QSI + + S A+ + + T +PT + +T
Sbjct: 214 AKETQSIEKTSAKD---LAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTP 270
Query: 325 SDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSI 384
+PT T +S PT ++ + T +S PT + T + PT +
Sbjct: 271 KEPTPT-------TIKSAPT-TPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPT 322
Query: 385 ATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDP 423
T + PT +S T +P + T +P
Sbjct: 323 TTKEPAPTTT---KSAPTTPKEPAPTTPKKPAPTTPKEP 358
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 38.5 bits (88), Expect = 0.012
Identities = 35/208 (16%), Positives = 67/208 (32%), Gaps = 2/208 (0%)
Query: 217 PTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQS 276
PT S T +P + T +P + T +P ++ + T +
Sbjct: 381 PTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKE 440
Query: 277 DPTDVMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSI 336
+ + T + PT + T + PT ++ + T +S PT ++ +
Sbjct: 441 PAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPT-TPKEPAPTTTKSAPT-TTKEPAP 498
Query: 337 ATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQ 396
T +S PT + T + PT + + PT + + PT +
Sbjct: 499 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKK 558
Query: 397 DRSIATAQSDPTDVMQDRSIATAQSDPT 424
+ PT + + PT
Sbjct: 559 PAPTTPKEPAPTTPKETAPTTPKKLTPT 586
Score = 34.7 bits (78), Expect = 0.17
Identities = 36/219 (16%), Positives = 67/219 (30%), Gaps = 16/219 (7%)
Query: 217 PTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQD-----QSIATAQSDPTDVMQDQSI 271
PT T A + P ++ + T +S PT + +S T +P +
Sbjct: 309 PTPTTPKEPASTTP----KEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPA 364
Query: 272 ATAQSDPTDVMQDQSIATAQRSDPTDVMQ------DQSIATAQSDPTDVMQDQSIATAQS 325
T +P + T +S PT + + T +P + T
Sbjct: 365 PTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPK 424
Query: 326 DPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIA 385
+P ++ + T +P + T +P T +P+
Sbjct: 425 EPAPTTKEPA-PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAP 483
Query: 386 TAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 424
T ++ + T +S PT + T + PT
Sbjct: 484 TTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPT 522
Score = 33.5 bits (75), Expect = 0.39
Identities = 53/311 (17%), Positives = 108/311 (34%), Gaps = 31/311 (9%)
Query: 113 SKAQDALGKDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDGEAAVWTISSCH 172
S + + + +K + + + Q + +K++ K+ T +P + EA
Sbjct: 131 SSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEA--------- 181
Query: 173 GKGKEKGHLVLHGDAYGQTCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMD 232
G G + G + T + S K++ K + P T++ +
Sbjct: 182 GSGLDNGDFKVTTPDTSTT--QHNKVSTSPKITTAKPINPRPSLPPNSD---TSKETSLT 236
Query: 233 VMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQR 292
V ++ ++ T ++ T+ Q+ + T + QSI + + S A+
Sbjct: 237 VNKETTVETKETTTTN---KQTSTDGKEKTTSAKETQSIEKTSAKD---LAPTSKVLAKP 290
Query: 293 SDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSI 352
+ + T +PT + +T +PT T +S PT ++ +
Sbjct: 291 TPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPT-------TIKSAPT-TPKEPAP 342
Query: 353 ATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQ 412
T +S PT + T + PT + T + PT +S T +P
Sbjct: 343 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTT---KSAPTTPKEPAPTTP 399
Query: 413 DRSIATAQSDP 423
+ T +P
Sbjct: 400 KKPAPTTPKEP 410
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 38.5 bits (88), Expect = 0.012
Identities = 35/208 (16%), Positives = 67/208 (32%), Gaps = 2/208 (0%)
Query: 217 PTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQS 276
PT S T +P + T +P + T +P ++ + T +
Sbjct: 422 PTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKE 481
Query: 277 DPTDVMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSI 336
+ + T + PT + T + PT ++ + T +S PT ++ +
Sbjct: 482 PAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPT-TPKEPAPTTTKSAPT-TTKEPAP 539
Query: 337 ATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQ 396
T +S PT + T + PT + + PT + + PT +
Sbjct: 540 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKK 599
Query: 397 DRSIATAQSDPTDVMQDRSIATAQSDPT 424
+ PT + + PT
Sbjct: 600 PAPTTPKEPAPTTPKETAPTTPKKLTPT 627
Score = 34.7 bits (78), Expect = 0.17
Identities = 36/219 (16%), Positives = 67/219 (30%), Gaps = 16/219 (7%)
Query: 217 PTGKTSIATAQSDPMDVMQDQSIATAQSDPTDVMQD-----QSIATAQSDPTDVMQDQSI 271
PT T A + P ++ + T +S PT + +S T +P +
Sbjct: 350 PTPTTPKEPASTTP----KEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPA 405
Query: 272 ATAQSDPTDVMQDQSIATAQRSDPTDVMQ------DQSIATAQSDPTDVMQDQSIATAQS 325
T +P + T +S PT + + T +P + T
Sbjct: 406 PTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPK 465
Query: 326 DPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIA 385
+P ++ + T +P + T +P T +P+
Sbjct: 466 EPAPTTKEPA-PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAP 524
Query: 386 TAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPT 424
T ++ + T +S PT + T + PT
Sbjct: 525 TTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPT 563
Score = 33.5 bits (75), Expect = 0.39
Identities = 53/311 (17%), Positives = 108/311 (34%), Gaps = 31/311 (9%)
Query: 113 SKAQDALGKDVKDPEGAIPIPQAQDMVFSSTAEKSQVHKQVTSRPQIDGEAAVWTISSCH 172
S + + + +K + + + Q + +K++ K+ T +P + EA
Sbjct: 172 SSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEA--------- 222
Query: 173 GKGKEKGHLVLHGDAYGQTCIHIHCFKLSQKLSLDKNLTGEVCFPTGKTSIATAQSDPMD 232
G G + G + T + S K++ K + P T++ +
Sbjct: 223 GSGLDNGDFKVTTPDTSTT--QHNKVSTSPKITTAKPINPRPSLPPNSD---TSKETSLT 277
Query: 233 VMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQR 292
V ++ ++ T ++ T+ Q+ + T + QSI + + S A+
Sbjct: 278 VNKETTVETKETTTTN---KQTSTDGKEKTTSAKETQSIEKTSAKD---LAPTSKVLAKP 331
Query: 293 SDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSI 352
+ + T +PT + +T +PT T +S PT ++ +
Sbjct: 332 TPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPT-------TIKSAPT-TPKEPAP 383
Query: 353 ATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQ 412
T +S PT + T + PT + T + PT +S T +P
Sbjct: 384 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTT---KSAPTTPKEPAPTTP 440
Query: 413 DRSIATAQSDP 423
+ T +P
Sbjct: 441 KKPAPTTPKEP 451
>gi|46243671 G protein-coupled receptor 152 [Homo sapiens]
Length = 470
Score = 38.5 bits (88), Expect = 0.012
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Query: 229 DPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIA 288
+PM Q Q AQ +Q +S TAQ Q QS TAQ + Q QS +
Sbjct: 343 EPMAEAQSQMDPVAQPQVNPTLQPRSDPTAQPQLNPTAQPQSDPTAQPQLNLMAQPQSDS 402
Query: 289 TAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPT 328
AQ T+V A++ P D++ T S PT
Sbjct: 403 VAQPQADTNVQTPAPAASSVPSPC----DEASPTPSSHPT 438
Score = 36.2 bits (82), Expect = 0.060
Identities = 38/102 (37%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 217 PTGKTSIATAQSDPMDVMQDQSIATAQ--SDPTDVMQDQSIATAQSDPTDVMQDQSIATA 274
PT +A AQS V Q Q T Q SDPT Q A QSDPT Q +A
Sbjct: 339 PTLPEPMAEAQSQMDPVAQPQVNPTLQPRSDPTAQPQLNPTAQPQSDPTAQPQLNLMAQP 398
Query: 275 QSD----PTDVMQDQSIATAQRSDPTDVMQDQSIATAQSDPT 312
QSD P Q+ A A S P+ D++ T S PT
Sbjct: 399 QSDSVAQPQADTNVQTPAPAASSVPSPC--DEASPTPSSHPT 438
Score = 35.8 bits (81), Expect = 0.078
Identities = 38/145 (26%), Positives = 56/145 (38%), Gaps = 13/145 (8%)
Query: 281 VMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQ 340
+M + T RS V+ + A + P + S+ + + + A +Q
Sbjct: 296 LMASADLRTLLRS----VLSSFAAALCEERPGSFTPTEPQTQLDSEGPTLPEPMAEAQSQ 351
Query: 341 SDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSI 400
DP Q +SDPT Q A QSDPT Q +A QSD S+
Sbjct: 352 MDPVAQPQVNPTLQPRSDPTAQPQLNPTAQPQSDPTAQPQLNLMAQPQSD--------SV 403
Query: 401 ATAQSDPTDVMQDRSIATAQSDPTD 425
A Q+D T+V A++ P D
Sbjct: 404 AQPQAD-TNVQTPAPAASSVPSPCD 427
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 37.4 bits (85), Expect = 0.027
Identities = 45/192 (23%), Positives = 72/192 (37%), Gaps = 20/192 (10%)
Query: 240 ATAQSDPTDVMQDQSIATAQ------SDPTDVMQDQSIATAQSDPTDVMQDQSIATAQRS 293
AT S T + + T + S V QD+++ AQS + Q +
Sbjct: 2344 ATTASTTTTTVSTTAAGTGEQRQSKLSPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQPSA 2403
Query: 294 DPTDVMQDQSIATAQSDPTDVMQDQSIAT----AQSDPTDVMQDRSIATAQSDPTDVMQD 349
P Q QS A + +Q Q+ + +++ PT + AQS P +Q
Sbjct: 2404 QPQPQTQPQSPAQPEVQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQG 2463
Query: 350 RSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDV-----MQDRSIATAQ 404
+S QS P+ + R +Q P Q + T S P + +Q S Q
Sbjct: 2464 QSPVRVQS-PSQT-RIRPSTPSQLSPG---QQSQVQTTTSQPIPIQPHTSLQIPSQGQPQ 2518
Query: 405 SDPTDVMQDRSI 416
S P VM+ ++
Sbjct: 2519 SQPQVVMKHNAV 2530
Score = 32.7 bits (73), Expect = 0.66
Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 13/129 (10%)
Query: 305 ATAQSDPTDVMQDQSIATAQ------SDPTDVMQDRSIATAQSD---PTDVMQDRSIATA 355
AT S T + + T + S V QD+++ AQS P + + +A
Sbjct: 2344 ATTASTTTTTVSTTAAGTGEQRQSKLSPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQPSA 2403
Query: 356 QSDPTDVMQDRSIATAQSDPTDVMQDRSIAT---AQSDPTDVMQDRSIATAQSDPTDVMQ 412
Q P Q + Q+ P +V ++++ +++ PT + AQS P +Q
Sbjct: 2404 QPQPQTQPQSPAQPEVQTQP-EVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQ 2462
Query: 413 DRSIATAQS 421
+S QS
Sbjct: 2463 GQSPVRVQS 2471
Score = 31.2 bits (69), Expect = 1.9
Identities = 31/134 (23%), Positives = 48/134 (35%), Gaps = 17/134 (12%)
Query: 220 KTSIATAQSDPMDVMQDQSIATAQSDPTDVMQD--QSIATAQSDPTDVMQDQSIATAQSD 277
+T+ +AQ P Q + Q+ P Q S +++ PT + AQS
Sbjct: 2397 QTAQPSAQPQPQTQPQSPAQPEVQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQ 2456
Query: 278 PTDVMQDQSIATAQRSDPTDVM----------QDQSIATAQSDPTDV-----MQDQSIAT 322
P +Q QS Q T + Q + T S P + +Q S
Sbjct: 2457 PQSNVQGQSPVRVQSPSQTRIRPSTPSQLSPGQQSQVQTTTSQPIPIQPHTSLQIPSQGQ 2516
Query: 323 AQSDPTDVMQDRSI 336
QS P VM+ ++
Sbjct: 2517 PQSQPQVVMKHNAV 2530
>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
[Homo sapiens]
Length = 1008
Score = 37.4 bits (85), Expect = 0.027
Identities = 28/178 (15%), Positives = 73/178 (41%), Gaps = 3/178 (1%)
Query: 218 TGKTSIATAQS-DPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQS 276
+ KT + + ++ DPM + ++ + DP + + ++ Q++ V + +++ +
Sbjct: 397 SAKTDLTSLKNVDPMSSGKVDPVSLGKMDPMCSGKPELLSPGQAERVSVGKAGTVSPGKE 456
Query: 277 DPTDVMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSI 336
DP ++ I+ R ++ + +S + +S+ TA P ++
Sbjct: 457 DPVSSRREDPISAGSRKTSSEKVNPESSGKTNPVSSGPGDPRSLGTA--GPPSAVKAEPA 514
Query: 337 ATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDV 394
+ DP + +A+ ++ PT + +A + DP + + + Q D +
Sbjct: 515 TGGKGDPLSSEKAGLVASGKAAPTASGKAEPLAVGKEDPVSKGKADAGPSGQGDSVSI 572
Score = 32.0 bits (71), Expect = 1.1
Identities = 31/183 (16%), Positives = 79/183 (43%), Gaps = 8/183 (4%)
Query: 199 KLSQKLSLDKN--LTGEVCFPTGKTSIATA--QSDPMDVMQDQSIATAQSDPTDVMQDQS 254
K K S D+N ++ F + K + +T+ + DP + + T +++P + +
Sbjct: 136 KTEPKSSDDRNPMFLEKMDFKSSKQADSTSIGKEDPGSSRKADPMFTGKAEPEILGKGDP 195
Query: 255 IATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDV 314
+A + DP V ++ + + DP + ++ + ++ DP + + +++ + DP
Sbjct: 196 VAPGRMDPMTVRKEDLGSLGKVDPLCSSKTYTV-SPRKEDPGSLRKVDPVSSDKVDPVFP 254
Query: 315 MQDQSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSD 374
+++ + + P + +A ++ D++ S D M S+ +A +
Sbjct: 255 RKEEPRYSGKEHP---VSSEKVAPTSAEKVDLVLSGKRDPGPSGKADPMPLESMDSASTG 311
Query: 375 PTD 377
T+
Sbjct: 312 KTE 314
Score = 30.4 bits (67), Expect = 3.3
Identities = 22/157 (14%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 267 QDQSIATAQSDPTDVMQDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSD 326
+ S T ++ + T+ + +P ++ + ++ +P + + ++ Q+D
Sbjct: 103 ESPSKETLEAHGASISGTPEATTSGKPEPVSSVKTEPKSSDDRNPMFLEKMDFKSSKQAD 162
Query: 327 PTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIAT 386
T + ++ ++ ++DP + T +++P + + +A + DP V ++ +
Sbjct: 163 STSIGKEDPGSSRKADP--------MFTGKAEPEILGKGDPVAPGRMDPMTVRKEDLGSL 214
Query: 387 AQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDP 423
+ DP + +++ + DP + + +++ + DP
Sbjct: 215 GKVDPLCSSKTYTVSPRKEDPGSLRKVDPVSSDKVDP 251
Score = 29.6 bits (65), Expect = 5.6
Identities = 21/137 (15%), Positives = 59/137 (43%), Gaps = 17/137 (12%)
Query: 223 IATAQSDPMDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVM 282
+A + DPM V ++ + + DP + +++ + DP + + +++ + DP
Sbjct: 196 VAPGRMDPMTVRKEDLGSLGKVDPLCSSKTYTVSPRKEDPGSLRKVDPVSSDKVDP---- 251
Query: 283 QDQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSD 342
++ +P ++ +++ + PT + + + + DP + ++D
Sbjct: 252 -----VFPRKEEPRYSGKEHPVSSEKVAPTSAEKVDLVLSGKRDPG--------PSGKAD 298
Query: 343 PTDVMQDRSIATAQSDP 359
P + S +T +++P
Sbjct: 299 PMPLESMDSASTGKTEP 315
>gi|239749340 PREDICTED: hypothetical protein XP_002347000 [Homo
sapiens]
Length = 349
Score = 37.0 bits (84), Expect = 0.035
Identities = 46/209 (22%), Positives = 66/209 (31%), Gaps = 10/209 (4%)
Query: 235 QDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQS-------- 286
QD S+ T QD ++ T QD ++ T QD S
Sbjct: 135 QDGSLPGQHPSRTAPFQDDTLPGWLPSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSR 194
Query: 287 IATAQ--RSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSDPT 344
IA+ Q S T QD S+ T QD ++ T QD S+ T
Sbjct: 195 IASFQGRHSSRTAPFQDGSLPGQHPSRTAPFQDSNLLGQHPSRTAPFQDSSLPRKHPSRT 254
Query: 345 DVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQ 404
Q S+ T QD ++ T QD ++ T QD ++
Sbjct: 255 APFQHSSLPGKHLSRTAPFQDNTLPGQHPSRTAPFQDDTLPGQHPSRTAPFQDSNLPGRL 314
Query: 405 SDPTDVMQDRSIATAQSDPTDVMQDQRLN 433
T QD ++ QD L+
Sbjct: 315 PSRTTPFQDGTLPGQHPSRMAPFQDSSLS 343
>gi|14149981 transmembrane protein 117 [Homo sapiens]
Length = 514
Score = 36.6 bits (83), Expect = 0.046
Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 11/105 (10%)
Query: 275 QSDPTDVMQDQSIATAQRSDPTDVMQDQSIA--TAQSDPTDVMQDQSIATAQSDPTDVMQ 332
+++P QD++ +R P++ +D I Q+ D + D S+ +SD +++
Sbjct: 419 KNEPRMENQDKTYTRMKRKSPSEHSKDMGITRENTQASVEDPLNDPSLVCIRSDFNEIVY 478
Query: 333 DRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTD 377
S T+++ + + + S A DPT T++S PT+
Sbjct: 479 KSSHLTSENLSSQLNESTSATEADQDPT---------TSKSTPTN 514
Score = 29.3 bits (64), Expect = 7.3
Identities = 23/105 (21%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 308 QSDPTDVMQDQSIATAQ-SDPTDVMQDRSIA--TAQSDPTDVMQDRSIATAQSDPTDVMQ 364
+++P QD++ + P++ +D I Q+ D + D S+ +SD +++
Sbjct: 419 KNEPRMENQDKTYTRMKRKSPSEHSKDMGITRENTQASVEDPLNDPSLVCIRSDFNEIVY 478
Query: 365 DRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTD 409
S T+++ + + + S A DPT T++S PT+
Sbjct: 479 KSSHLTSENLSSQLNESTSATEADQDPT---------TSKSTPTN 514
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 35.8 bits (81), Expect = 0.078
Identities = 46/204 (22%), Positives = 72/204 (35%), Gaps = 20/204 (9%)
Query: 240 ATAQSDPTDVMQDQSIATAQ------SDPTDVMQDQSIATAQSDPTDVMQDQSIATAQRS 293
AT S T + + T + S V QD+++ AQS + Q +
Sbjct: 2218 ATTASTTTTTVSTTAAGTGEQRQSKLSPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQPSA 2277
Query: 294 DPTDVMQDQSIATAQSDPTDVMQDQSIAT----AQSDPTDVMQDRSIATAQSDPTDVMQD 349
P Q QS A + +Q Q+ + +++ PT + AQS P +Q
Sbjct: 2278 QPQPQTQPQSPAQPEVQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQG 2337
Query: 350 RSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTD 409
+S QS P+ + R +Q P Q + T S P + S+
Sbjct: 2338 QSPVRVQS-PSQT-RIRPSTPSQLSPG---QQSQVQTTTSQPIPIQPHTSLQIPSQG--- 2389
Query: 410 VMQDRSIATAQSDPTDVMQDQRLN 433
Q +S QS + Q LN
Sbjct: 2390 --QPQSQPQVQSSTQTLSSGQTLN 2411
Score = 30.0 bits (66), Expect = 4.3
Identities = 43/225 (19%), Positives = 76/225 (33%), Gaps = 24/225 (10%)
Query: 220 KTSIATAQSDPMDVMQDQSIATAQSDPTDVMQD--QSIATAQSDPTDVMQDQSIATAQSD 277
+T+ +AQ P Q + Q+ P Q S +++ PT + AQS
Sbjct: 2271 QTAQPSAQPQPQTQPQSPAQPEVQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQ 2330
Query: 278 PTDVMQDQSIATAQRSDPTDVM----------QDQSIATAQSDPTDVMQDQSI-ATAQSD 326
P +Q QS Q T + Q + T S P + S+ +Q
Sbjct: 2331 PQSNVQGQSPVRVQSPSQTRIRPSTPSQLSPGQQSQVQTTTSQPIPIQPHTSLQIPSQGQ 2390
Query: 327 PTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATA------QSDPTDVMQ 380
P Q +S +T + ++++ + Q + A Q +Q
Sbjct: 2391 PQSQPQVQS-STQTLSSGQTLNQVTVSSPSRPQLQIQQPQPQVIAVPQLQQQVQVLSQIQ 2449
Query: 381 DRSIATAQSD----PTDVMQDRSIATAQSDPTDVMQDRSIATAQS 421
+ +A Q+ P + I QS Q +++ T Q+
Sbjct: 2450 SQVVAQIQAQQSGVPQQIKLQLPIQIQQSSAVQTHQIQNVVTVQA 2494
>gi|7662414 inositol polyphosphate-5-phosphatase F [Homo sapiens]
Length = 1132
Score = 35.0 bits (79), Expect = 0.13
Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 16/189 (8%)
Query: 236 DQSIATAQSDPT-DVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQRS- 293
D S+ T ++ D +Q +S SD D+ + ++SD +D+ +A + S
Sbjct: 828 DSSLETMENTGVMDKVQAESDGDMSSDNDSYHSDEFLTNSKSD-----EDRQLANSLESV 882
Query: 294 DPTDVMQDQSIATAQSDPTDVMQDQSIATAQSD---PTD--VMQDRSIATAQSDP---TD 345
P D + S S P + QS+++ S P++ V + Q P +
Sbjct: 883 GPIDYVLP-SCGIIASAPRLGSRSQSLSSTDSSVHAPSEITVAHGSGLGKGQESPLKKSP 941
Query: 346 VMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQS 405
D I T + P D+ R + AQ+ T + + RS++ S + M ++ QS
Sbjct: 942 SAGDVHILTGFAKPMDIYCHRFVQDAQNKVTHLSETRSVSQQASQERNQMTNQVSNETQS 1001
Query: 406 DPTDVMQDR 414
+ T+ R
Sbjct: 1002 ESTEQTPSR 1010
Score = 34.3 bits (77), Expect = 0.23
Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 15/177 (8%)
Query: 231 MDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSD--PTDVMQDQS-- 286
MD +Q +S SD D+ + ++SD +D+ +A + P D +
Sbjct: 840 MDKVQAESDGDMSSDNDSYHSDEFLTNSKSD-----EDRQLANSLESVGPIDYVLPSCGI 894
Query: 287 IATAQR--SDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDP---TDVMQDRSIATAQS 341
IA+A R S + S A S+ T V + Q P + D I T +
Sbjct: 895 IASAPRLGSRSQSLSSTDSSVHAPSEIT-VAHGSGLGKGQESPLKKSPSAGDVHILTGFA 953
Query: 342 DPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDR 398
P D+ R + AQ+ T + + RS++ S + M ++ QS+ T+ R
Sbjct: 954 KPMDIYCHRFVQDAQNKVTHLSETRSVSQQASQERNQMTNQVSNETQSESTEQTPSR 1010
Score = 31.2 bits (69), Expect = 1.9
Identities = 37/175 (21%), Positives = 69/175 (39%), Gaps = 30/175 (17%)
Query: 284 DQSIATAQRSDPTDVMQDQSIATAQSDPTDVMQDQSIATAQSDPTDVMQDRSIATAQSD- 342
D S+ T + + D +Q +S SD D+ + ++SD +DR +A +
Sbjct: 828 DSSLETMENTGVMDKVQAESDGDMSSDNDSYHSDEFLTNSKSD-----EDRQLANSLESV 882
Query: 343 -PTDVM---------------QDRSIATAQSD---PTD--VMQDRSIATAQSDP---TDV 378
P D + + +S+++ S P++ V + Q P +
Sbjct: 883 GPIDYVLPSCGIIASAPRLGSRSQSLSSTDSSVHAPSEITVAHGSGLGKGQESPLKKSPS 942
Query: 379 MQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDRSIATAQSDPTDVMQDQRLN 433
D I T + P D+ R + AQ+ T + + RS++ S + M +Q N
Sbjct: 943 AGDVHILTGFAKPMDIYCHRFVQDAQNKVTHLSETRSVSQQASQERNQMTNQVSN 997
>gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens]
Length = 1863
Score = 33.9 bits (76), Expect = 0.30
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 60 PSYSSVATDTASLEGMETLV---TNGDTIP---WLCPSQPLARAELECPQPRTLQLHLLS 113
PS+SSV D A +EG + ++ G +P WL QP+ A C + +LH+
Sbjct: 514 PSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTC-EAGVAELHI-- 570
Query: 114 KAQDALGKD 122
QDAL +D
Sbjct: 571 --QDALPED 577
>gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens]
Length = 1914
Score = 33.9 bits (76), Expect = 0.30
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 60 PSYSSVATDTASLEGMETLV---TNGDTIP---WLCPSQPLARAELECPQPRTLQLHLLS 113
PS+SSV D A +EG + ++ G +P WL QP+ A C + +LH+
Sbjct: 514 PSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTC-EAGVAELHI-- 570
Query: 114 KAQDALGKD 122
QDAL +D
Sbjct: 571 --QDALPED 577
>gi|116008190 myosin light chain kinase isoform 3B [Homo sapiens]
Length = 1794
Score = 33.9 bits (76), Expect = 0.30
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 60 PSYSSVATDTASLEGMETLV---TNGDTIP---WLCPSQPLARAELECPQPRTLQLHLLS 113
PS+SSV D A +EG + ++ G +P WL QP+ A C + +LH+
Sbjct: 445 PSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTC-EAGVAELHI-- 501
Query: 114 KAQDALGKD 122
QDAL +D
Sbjct: 502 --QDALPED 508
>gi|116008188 myosin light chain kinase isoform 2 [Homo sapiens]
Length = 1845
Score = 33.9 bits (76), Expect = 0.30
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 60 PSYSSVATDTASLEGMETLV---TNGDTIP---WLCPSQPLARAELECPQPRTLQLHLLS 113
PS+SSV D A +EG + ++ G +P WL QP+ A C + +LH+
Sbjct: 445 PSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTC-EAGVAELHI-- 501
Query: 114 KAQDALGKD 122
QDAL +D
Sbjct: 502 --QDALPED 508
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.123 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,757,626
Number of Sequences: 37866
Number of extensions: 666082
Number of successful extensions: 2303
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 1650
Number of HSP's gapped (non-prelim): 213
length of query: 435
length of database: 18,247,518
effective HSP length: 105
effective length of query: 330
effective length of database: 14,271,588
effective search space: 4709624040
effective search space used: 4709624040
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.