LOC100290517 21052

Name: LOC100290517	Sequence: fasta or formatted (271aa)		NCBI GI: 239752001
Description: PREDICTED: hypothetical protein XP_002348063		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.1 30 3 C cysteine 2.2 6 2 D aspartate 3.7 10 1 E glutamate 6.6 18 1 F phenylalanine 1.5 4 1 G glycine 10.7 29 2 H histidine 3.0 8 2 I isoleucine 0.7 2 1 K lysine 3.3 9 1 L leucine 8.9 24 2 M methionine 1.1 3 1 N asparagine 1.5 4 1 P proline 8.5 23 2 Q glutamine 3.7 10 1 R arginine 14.0 38 3 S serine 7.0 19 2 T threonine 5.5 15 2 V valine 5.5 15 1 W tryptophan 1.1 3 1 Y tyrosine 0.4 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002348063 LOC100292282 1.000 PREDICTED: hypothetical protein LOC100288900 0.989 PREDICTED: hypothetical protein XP_002343772 SYNJ1 0.023 synaptojanin 1 isoform d LOC100290372 0.023 PREDICTED: hypothetical protein XP_002346788 LOC100288606 0.023 PREDICTED: hypothetical protein XP_002342652 COL2A1 0.021 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.021 collagen, type II, alpha 1 isoform 2 precursor [Hom... CECR6 0.017 cat eye syndrome chromosome region, candidate 6 isof... NCOR2 0.017 nuclear receptor co-repressor 2 isoform 2 NCOR2 0.017 nuclear receptor co-repressor 2 isoform 1 CLASP1 0.017 CLIP-associating protein 1 isoform 3 CLASP1 0.017 CLIP-associating protein 1 isoform 2 BAHCC1 0.017 BAH domain and coiled-coil containing 1 LOC100292370 0.015 PREDICTED: hypothetical protein RPL18 0.015 ribosomal protein L18 SRRM2 0.015 splicing coactivator subunit SRm300 C2orf72 0.013 hypothetical protein LOC257407 CLASP1 0.013 CLIP-associating protein 1 isoform 1 SYNPO 0.013 synaptopodin isoform B SYNPO 0.013 synaptopodin isoform A KHDRBS3 0.013 KH domain containing, RNA binding, signal transductio... APC2 0.013 adenomatosis polyposis coli 2 LOC389333 0.011 hypothetical protein LOC389333 LOC100293129 0.011 PREDICTED: hypothetical protein LOC100134067 0.011 PREDICTED: hypothetical protein DDX46 0.011 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 LOC100293136 0.011 PREDICTED: hypothetical protein LOC100292048 0.011 PREDICTED: hypothetical protein XP_002344877 MUC12 0.011 PREDICTED: mucin 12 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.