C15orf42 2137

Name: C15orf42	Sequence: fasta or formatted (1910aa)		NCBI GI: 118421085
Description: leucine-rich repeat kinase 1		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 123 3 C cysteine 1.8 35 2 D aspartate 4.7 89 2 E glutamate 7.2 138 3 F phenylalanine 2.6 49 2 G glycine 5.2 99 3 H histidine 2.5 47 2 I isoleucine 2.8 53 2 K lysine 6.6 127 3 L leucine 9.8 187 3 M methionine 1.8 34 1 N asparagine 1.8 34 1 P proline 9.0 172 5 Q glutamine 4.7 89 2 R arginine 6.9 132 3 S serine 12.5 239 3 T threonine 6.3 120 2 V valine 5.1 97 2 W tryptophan 1.3 24 1 Y tyrosine 1.2 22 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leucine-rich repeat kinase 1 PRG4 0.017 proteoglycan 4 isoform D PRG4 0.017 proteoglycan 4 isoform C PRG4 0.017 proteoglycan 4 isoform B PRG4 0.017 proteoglycan 4 isoform A NACA 0.014 nascent polypeptide-associated complex alpha subuni... SRRM2 0.013 splicing coactivator subunit SRm300 NEFH 0.012 neurofilament, heavy polypeptide 200kDa SRRM1 0.012 serine/arginine repetitive matrix 1 MUC2 0.012 mucin 2 precursor FLJ22184 0.011 PREDICTED: hypothetical protein FLJ22184 MLL2 0.010 myeloid/lymphoid or mixed-lineage leukemia 2 FLJ22184 0.010 PREDICTED: hypothetical protein FLJ22184 POLR2A 0.009 DNA-directed RNA polymerase II A TCOF1 0.008 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.008 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.008 Treacher Collins-Franceschetti syndrome 1 isoform a ... TCOF1 0.008 Treacher Collins-Franceschetti syndrome 1 isoform c ... DPCR1 0.008 diffuse panbronchiolitis critical region 1 protein ... BSN 0.008 bassoon protein RAPH1 0.008 Ras association and pleckstrin homology domains 1 is... KIAA1522 0.008 hypothetical protein LOC57648 SYNJ1 0.008 synaptojanin 1 isoform a MUC5B 0.008 mucin 5, subtype B, tracheobronchial ARHGAP17 0.008 nadrin isoform 1 ARHGAP17 0.008 nadrin isoform 2 C1orf127 0.008 hypothetical protein LOC148345 PCLO 0.008 piccolo isoform 2 PCLO 0.008 piccolo isoform 1 MUC17 0.008 mucin 17 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.