Guide to the Human Genome
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Name: SIGLEC7 Sequence: fasta or formatted (374aa) NCBI GI: 118197279
Description:

sialic acid binding Ig-like lectin 7 isoform 2

Referenced in:

Lectin Families

Other entries for this name:
alt prot [467aa] sialic acid binding Ig-like lectin 7 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         26           2
 C cysteine            1.9          7           1
 D aspartate           5.1         19           2
 E glutamate           5.3         20           2
 F phenylalanine       2.9         11           2
 G glycine             7.8         29           2
 H histidine           2.4          9           2
 I isoleucine          2.7         10           1
 K lysine              3.7         14           2
 L leucine            10.2         38           6
 M methionine          1.9          7           1
 N asparagine          5.1         19           2
 P proline             5.1         19           2
 Q glutamine           5.3         20           2
 R arginine            5.9         22           1
 S serine             10.4         39           3
 T threonine           5.3         20           1
 V valine              7.2         27           2
 W tryptophan          2.1          8           1
 Y tyrosine            2.7         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sialic acid binding Ig-like lectin 7 isoform 2 [Hom... 
SIGLEC7               0.595   sialic acid binding Ig-like lectin 7 isoform 1 
SIGLEC12              0.451   sialic acid binding immunoglobulin-like lectin-like ...
SIGLEC12              0.446   sialic acid binding immunoglobulin-like lectin-like ...
SIGLEC8               0.409   sialic acid binding Ig-like lectin 8 
SIGLEC9               0.367   sialic acid binding Ig-like lectin 9 
SIGLEC6               0.272   sialic acid binding Ig-like lectin 6 isoform 2 prec...
CD33                  0.247   CD33 antigen isoform 1 precursor 
SIGLEC11              0.211   sialic acid binding Ig-like lectin 11 isoform 2 [Ho...
SIGLEC6               0.182   sialic acid binding Ig-like lectin 6 isoform 1 prec...
SIGLEC14              0.175   sialic acid binding Ig-like lectin 14 
SIGLEC5               0.172   sialic acid binding Ig-like lectin 5 
SIGLEC11              0.145   sialic acid binding Ig-like lectin 11 isoform 1 [Ho...
SIGLEC10              0.142   sialic acid binding Ig-like lectin 10 
SIGLEC6               0.122   sialic acid binding Ig-like lectin 6 isoform 3 prec...
CD33                  0.062   CD33 antigen isoform 2 precursor 
MAG                   0.053   myelin associated glycoprotein isoform a precursor [...
MAG                   0.053   myelin associated glycoprotein isoform b precursor [...
SIGLEC15              0.050   sialic acid binding Ig-like lectin 15 
SIGLEC1               0.042   sialoadhesin precursor 
HSPG2                 0.041   heparan sulfate proteoglycan 2 
PXDN                  0.041   peroxidasin 
VSIG2                 0.037   V-set and immunoglobulin domain containing 2 
LRIT2                 0.033   leucine rich repeat containing 22 
LRIG1                 0.031   leucine-rich repeats and immunoglobulin-like domains...
KIRREL3               0.030   kin of IRRE like 3 isoform 2 
BOC                   0.028   brother of CDO 
KIRREL3               0.027   kin of IRRE like 3 isoform 1 
TTN                   0.026   titin isoform N2-A 
TTN                   0.026   titin isoform novex-2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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