Guide to the Human Genome
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Name: KIRREL3 Sequence: fasta or formatted (778aa) NCBI GI: 26006461
Description:

kin of IRRE like 3 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {600aa} kin of IRRE like 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         47           2
 C cysteine            2.3         18           2
 D aspartate           4.6         36           2
 E glutamate           6.0         47           3
 F phenylalanine       3.3         26           2
 G glycine             7.7         60           2
 H histidine           1.9         15           2
 I isoleucine          5.3         41           2
 K lysine              4.8         37           1
 L leucine             8.2         64           2
 M methionine          1.7         13           2
 N asparagine          3.3         26           1
 P proline             4.9         38           3
 Q glutamine           5.5         43           2
 R arginine            5.4         42           2
 S serine             10.4         81           3
 T threonine           6.2         48           2
 V valine              8.6         67           3
 W tryptophan          1.0          8           1
 Y tyrosine            2.7         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kin of IRRE like 3 isoform 1 
KIRREL3               0.726   kin of IRRE like 3 isoform 2 
KIRREL                0.387   kin of IRRE like 
KIRREL2               0.273   kin of IRRE-like 2 isoform c 
KIRREL2               0.273   kin of IRRE-like 2 isoform a 
KIRREL2               0.245   kin of IRRE-like 2 isoform b 
HMCN1                 0.057   hemicentin 1 
NPHS1                 0.057   nephrin precursor 
ROBO3                 0.056   roundabout, axon guidance receptor, homolog 3 
ROBO2                 0.053   roundabout, axon guidance receptor, homolog 2 isofor...
ROBO2                 0.052   roundabout, axon guidance receptor, homolog 2 isofo...
HMCN2                 0.048   PREDICTED: hemicentin 2 
HMCN2                 0.048   PREDICTED: hemicentin 2 
HMCN2                 0.048   PREDICTED: hemicentin 2 
LOC100292387          0.048   PREDICTED: similar to hemicentin 2 
CADM4                 0.045   cell adhesion molecule 4 
CADM3                 0.045   cell adhesion molecule 3 isoform 2 
CADM3                 0.045   cell adhesion molecule 3 isoform 1 
TTN                   0.044   titin isoform N2-A 
LOC100289200          0.044   PREDICTED: hypothetical protein XP_002342997 
DSCAML1               0.042   Down syndrome cell adhesion molecule like 1 
ROBO1                 0.041   roundabout 1 isoform b 
PXDN                  0.041   peroxidasin 
DSCAM                 0.041   Down syndrome cell adhesion molecule isoform CHD2-42...
ROBO1                 0.041   roundabout 1 isoform a 
ROBO1                 0.040   roundabout 1 isoform d 
ROBO1                 0.040   roundabout 1 isoform c 
LOC642132             0.040   PREDICTED: similar to roundabout 1 isoform 1 
LOC642132             0.040   PREDICTED: similar to roundabout 1 isoform 2 
BCAM                  0.036   basal cell adhesion molecule isoform 1 precursor [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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