Guide to the Human Genome
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Name: SIGLEC12 Sequence: fasta or formatted (595aa) NCBI GI: 16506828
Description:

sialic acid binding immunoglobulin-like lectin-like protein 1 isoform a precursor

Referenced in:

Lectin Families

Other entries for this name:
alt prot [477aa] sialic acid binding immunoglobulin-like lectin-like protein 1 iso...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         38           1
 C cysteine            2.5         15           1
 D aspartate           4.4         26           2
 E glutamate           4.7         28           2
 F phenylalanine       2.5         15           1
 G glycine             7.7         46           2
 H histidine           2.5         15           2
 I isoleucine          3.4         20           2
 K lysine              3.0         18           2
 L leucine             9.7         58           7
 M methionine          1.7         10           1
 N asparagine          3.9         23           2
 P proline             7.6         45           2
 Q glutamine           4.7         28           1
 R arginine            5.0         30           1
 S serine             10.1         60           2
 T threonine           7.2         43           2
 V valine              7.6         45           3
 W tryptophan          1.8         11           1
 Y tyrosine            3.5         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sialic acid binding immunoglobulin-like lectin-like ... 
SIGLEC12              0.756   sialic acid binding immunoglobulin-like lectin-like ...
SIGLEC7               0.504   sialic acid binding Ig-like lectin 7 isoform 1 
SIGLEC8               0.502   sialic acid binding Ig-like lectin 8 
SIGLEC9               0.477   sialic acid binding Ig-like lectin 9 
SIGLEC6               0.328   sialic acid binding Ig-like lectin 6 isoform 1 prec...
SIGLEC6               0.304   sialic acid binding Ig-like lectin 6 isoform 2 prec...
SIGLEC6               0.283   sialic acid binding Ig-like lectin 6 isoform 3 prec...
SIGLEC7               0.274   sialic acid binding Ig-like lectin 7 isoform 2 [Hom...
SIGLEC14              0.256   sialic acid binding Ig-like lectin 14 
SIGLEC5               0.239   sialic acid binding Ig-like lectin 5 
SIGLEC11              0.219   sialic acid binding Ig-like lectin 11 isoform 2 [Ho...
CD33                  0.219   CD33 antigen isoform 1 precursor 
SIGLEC10              0.206   sialic acid binding Ig-like lectin 10 
SIGLEC11              0.178   sialic acid binding Ig-like lectin 11 isoform 1 [Ho...
CD33                  0.103   CD33 antigen isoform 2 precursor 
MAG                   0.078   myelin associated glycoprotein isoform a precursor [...
MAG                   0.078   myelin associated glycoprotein isoform b precursor [...
SIGLEC1               0.059   sialoadhesin precursor 
CD22                  0.051   CD22 molecule 
HSPG2                 0.028   heparan sulfate proteoglycan 2 
IGSF9B                0.027   immunoglobulin superfamily, member 9B 
MYLK                  0.027   myosin light chain kinase isoform 3A 
MYLK                  0.027   myosin light chain kinase isoform 1 
SIGLEC15              0.026   sialic acid binding Ig-like lectin 15 
HMCN2                 0.025   PREDICTED: hemicentin 2 
HMCN2                 0.025   PREDICTED: hemicentin 2 
HMCN2                 0.025   PREDICTED: hemicentin 2 
CEACAM6               0.024   carcinoembryonic antigen-related cell adhesion molec...
PXDNL                 0.024   peroxidasin homolog-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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