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Search of human proteins with 118130809
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|118130809 endothelial cell-specific chemotaxis regulator
[Homo sapiens]
(205 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|118130809 endothelial cell-specific chemotaxis regulator [Hom... 401 e-112
gi|161019170 mucin 5AC [Homo sapiens] 38 0.005
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 38 0.005
gi|28144893 crumbs 3 isoform b precursor [Homo sapiens] 36 0.020
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 34 0.076
gi|45331215 leucine zipper, putative tumor suppressor 2 [Homo sa... 34 0.076
gi|28559039 mediator complex subunit 1 [Homo sapiens] 34 0.099
gi|91982772 mucin 17 [Homo sapiens] 34 0.099
gi|167736355 mucin 4 isoform a [Homo sapiens] 33 0.13
gi|38787970 tensin like C1 domain containing phosphatase isoform... 33 0.13
gi|38787957 tensin like C1 domain containing phosphatase isoform... 33 0.13
gi|38787941 tensin like C1 domain containing phosphatase isoform... 33 0.13
gi|21040241 crumbs 3 isoform a precursor [Homo sapiens] 33 0.13
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 33 0.22
gi|119829187 alpha 1 type XVII collagen [Homo sapiens] 33 0.22
gi|221139926 NHS-like 1 [Homo sapiens] 32 0.29
gi|16933557 dachsous 1 precursor [Homo sapiens] 32 0.29
gi|33946327 nucleoporin 214kDa [Homo sapiens] 32 0.38
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 32 0.38
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 32 0.49
gi|6912602 ADP-ribosylation factor interacting protein 2 [Homo s... 32 0.49
gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens] 32 0.49
gi|15042969 transmembrane protein 27 [Homo sapiens] 32 0.49
gi|197383100 PDZ and LIM domain 5 isoform b [Homo sapiens] 31 0.64
gi|197383077 PDZ and LIM domain 5 isoform a [Homo sapiens] 31 0.64
gi|116812565 zinc finger protein, subfamily 1A, 5 [Homo sapiens] 31 0.64
gi|169217460 PREDICTED: similar to Mucin-6, partial [Homo sapiens] 31 0.84
gi|67010025 Sp4 transcription factor [Homo sapiens] 31 0.84
gi|126365795 potassium channel, subfamily K, member 2 isoform c ... 31 0.84
gi|24308326 BR serine/threonine kinase 1 [Homo sapiens] 31 0.84
>gi|118130809 endothelial cell-specific chemotaxis regulator [Homo
sapiens]
Length = 205
Score = 401 bits (1031), Expect = e-112
Identities = 205/205 (100%), Positives = 205/205 (100%)
Query: 1 MGTAGAMQLCWVILGFLLFRGHNSQPTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEA 60
MGTAGAMQLCWVILGFLLFRGHNSQPTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEA
Sbjct: 1 MGTAGAMQLCWVILGFLLFRGHNSQPTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEA 60
Query: 61 NRPSHLSSTGTPGAGVPSSGRDGGTSRDTFQTVPPNSTTMSLSMREDATILPSPTSETVL 120
NRPSHLSSTGTPGAGVPSSGRDGGTSRDTFQTVPPNSTTMSLSMREDATILPSPTSETVL
Sbjct: 61 NRPSHLSSTGTPGAGVPSSGRDGGTSRDTFQTVPPNSTTMSLSMREDATILPSPTSETVL 120
Query: 121 TVAAFGVISFIVILVVVVIILVGVVSLRFKCRKSKESEDPQKPGSSGLSESCSTANGEKD 180
TVAAFGVISFIVILVVVVIILVGVVSLRFKCRKSKESEDPQKPGSSGLSESCSTANGEKD
Sbjct: 121 TVAAFGVISFIVILVVVVIILVGVVSLRFKCRKSKESEDPQKPGSSGLSESCSTANGEKD 180
Query: 181 SITLISMKNINMNNGKQSLSAEKVL 205
SITLISMKNINMNNGKQSLSAEKVL
Sbjct: 181 SITLISMKNINMNNGKQSLSAEKVL 205
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 38.1 bits (87), Expect = 0.005
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 20/110 (18%)
Query: 29 TQTSSSQGGLGGLSLTTEP-----------VSSNPGYIPSSEANRPSHLSSTGTPGAGVP 77
T +S+ G+ G + TEP S+ P+ + PS ++ P G
Sbjct: 3997 TAWTSATSGILGTTHITEPSTVTSHTPAATTSTTQHSTPALSSPHPSSRTTESPPSPGTT 4056
Query: 78 SSGRDGGTSRDTFQTVPPNSTTMSLSMREDATILP-SPTSETVLTVAAFG 126
+ G GTSR T P + T +T+LP SPTS + TV G
Sbjct: 4057 TPGHTRGTSRTTATATPSKTRT--------STLLPSSPTSAPITTVVTTG 4098
Score = 36.2 bits (82), Expect = 0.020
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 19/106 (17%)
Query: 22 HNSQPTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGR 81
H ++P+ T TS + G + + P S+P PS ++ P G + G
Sbjct: 3366 HITEPS-TGTSHTPAATTGTTQHSTPALSSP---------HPSSRTTESPPSPGTTTPGH 3415
Query: 82 DGGTSRDTFQTVPPNSTTMSLSMREDATILP-SPTSETVLTVAAFG 126
TSR T P + T +T+LP SPTS + TV G
Sbjct: 3416 TRATSRTTATATPSKTRT--------STLLPSSPTSAPITTVVTMG 3453
Score = 35.8 bits (81), Expect = 0.026
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 19/106 (17%)
Query: 22 HNSQPTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGR 81
H ++P+ T TS + G + + P S+P PS ++ P G + G
Sbjct: 2864 HITEPS-TVTSHTLAATTGTTQHSTPALSSP---------HPSSRTTESPPSPGTTTPGH 2913
Query: 82 DGGTSRDTFQTVPPNSTTMSLSMREDATILP-SPTSETVLTVAAFG 126
TSR T P + T +T+LP SPTS + TV G
Sbjct: 2914 TTATSRTTATATPSKTRT--------STLLPSSPTSAPITTVVTMG 2951
Score = 35.4 bits (80), Expect = 0.034
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 19/106 (17%)
Query: 22 HNSQPTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGR 81
H ++P+ T TS + G + + P S+P PS ++ P G + G
Sbjct: 4513 HITEPS-TGTSHTPAATTGTTQHSTPALSSP---------HPSSRTTESPPSPGTTTPGH 4562
Query: 82 DGGTSRDTFQTVPPNSTTMSLSMREDATILP-SPTSETVLTVAAFG 126
TSR T P + T +T+LP SPTS + TV G
Sbjct: 4563 TTATSRTTATATPSKTRT--------STLLPSSPTSAPITTVVTTG 4600
Score = 30.4 bits (67), Expect = 1.1
Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 18/107 (16%)
Query: 24 SQPTMTQTSSSQGGLGGLSLT-TEPV--------SSNPGYIPSSEANRPSHLSSTGTPGA 74
S T + T ++ G L L+ T T P SS+PG + A R + + T T
Sbjct: 3762 STATASSTRATAGTLKVLTSTATTPTVISSRATPSSSPGTATALPALRSTATTPTATSVT 3821
Query: 75 GVPSSGRDGGTSRDTFQTVPPNSTTMSLSMREDATILPSPTSETVLT 121
+PSS +R + T P + TMS T PS T ETV T
Sbjct: 3822 AIPSSSLGTAWTRLSQTTTP--TATMS-------TATPSSTPETVHT 3859
Score = 29.6 bits (65), Expect = 1.9
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 9/73 (12%)
Query: 49 SSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGGTSRDTFQTVPPNSTTMSLSMREDA 108
SS+PG + A R + + T T +PSS G T QT P +T +
Sbjct: 4971 SSSPGTATALPALRSTATTPTATSFTAIPSSSL-GTTWTRLSQTTTPTATM--------S 5021
Query: 109 TILPSPTSETVLT 121
T PS T ETV T
Sbjct: 5022 TATPSSTPETVHT 5034
Score = 28.1 bits (61), Expect = 5.5
Identities = 31/108 (28%), Positives = 43/108 (39%), Gaps = 16/108 (14%)
Query: 21 GHNSQPTMTQTSSSQGGLGGLSLTTEPV-------SSNPGYIPSSEANRPSHLSSTGTPG 73
G + PT T ++ + + TT V SS+PG + A R + + T T
Sbjct: 2614 GSTATPTSTLRTAPPPKVLTTTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATSV 2673
Query: 74 AGVPSSGRDGGTSRDTFQTVPPNSTTMSLSMREDATILPSPTSETVLT 121
+PSS G T QT P +T +T PS T ET T
Sbjct: 2674 TPIPSSSL-GTTWTRLSQTTTPTATM--------STATPSSTPETAHT 2712
Score = 28.1 bits (61), Expect = 5.5
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 50 SNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGGTSRDTFQTVPPNSTTMSLSMREDAT 109
S+PG + A R + + T T +PSS G T QT P +T +T
Sbjct: 3152 SSPGTATALPALRSTATTPTATSFTAIPSSSL-GTTWTRLSQTTTPTATM--------ST 3202
Query: 110 ILPSPTSETVLT 121
PS T ETV T
Sbjct: 3203 ATPSSTPETVHT 3214
Score = 27.7 bits (60), Expect = 7.1
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 10/95 (10%)
Query: 28 MTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGGTSR 87
+T T+++ G +T SS PG P P L+S T S + R
Sbjct: 4726 LTTTATTTASTG----STATPSSTPGTAPP-----PKVLTSPATTPTATSSKATSSSSPR 4776
Query: 88 DTFQTVPPNSTTMSLSMREDATILPSPTSETVLTV 122
T T+P ++T + S T +PS T T T+
Sbjct: 4777 -TATTLPVLTSTATKSTATSVTPIPSSTLGTTGTL 4810
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 38.1 bits (87), Expect = 0.005
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 20/110 (18%)
Query: 29 TQTSSSQGGLGGLSLTTEP-----------VSSNPGYIPSSEANRPSHLSSTGTPGAGVP 77
T +S+ G+ G + TEP S+ P+ + PS ++ P G
Sbjct: 3472 TAWTSATSGILGTTHITEPSTVTSHTPAATTSTTQHSTPALSSPHPSSRTTESPPSPGTT 3531
Query: 78 SSGRDGGTSRDTFQTVPPNSTTMSLSMREDATILP-SPTSETVLTVAAFG 126
+ G GTSR T P + T +T+LP SPTS + TV G
Sbjct: 3532 TPGHTRGTSRTTATATPSKTRT--------STLLPSSPTSAPITTVVTTG 3573
Score = 36.2 bits (82), Expect = 0.020
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 19/106 (17%)
Query: 22 HNSQPTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGR 81
H ++P+ T TS + G + + P S+P PS ++ P G + G
Sbjct: 2786 HITEPS-TGTSHTPAATTGTTQHSTPALSSP---------HPSSRTTESPPSPGTTTPGH 2835
Query: 82 DGGTSRDTFQTVPPNSTTMSLSMREDATILP-SPTSETVLTVAAFG 126
TSR T P + T +T+LP SPTS + TV G
Sbjct: 2836 TRATSRTTATATPSKTRT--------STLLPSSPTSAPITTVVTMG 2873
Score = 35.8 bits (81), Expect = 0.026
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 19/106 (17%)
Query: 22 HNSQPTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGR 81
H ++P+ T TS + G + + P S+P PS ++ P G + G
Sbjct: 2229 HITEPS-TVTSHTLAATTGTTQHSTPALSSP---------HPSSRTTESPPSPGTTTPGH 2278
Query: 82 DGGTSRDTFQTVPPNSTTMSLSMREDATILP-SPTSETVLTVAAFG 126
TSR T P + T +T+LP SPTS + TV G
Sbjct: 2279 TTATSRTTATATPSKTRT--------STLLPSSPTSAPITTVVTMG 2316
Score = 35.4 bits (80), Expect = 0.034
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 19/106 (17%)
Query: 22 HNSQPTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGR 81
H ++P+ T TS + G + + P S+P PS ++ P G + G
Sbjct: 4043 HITEPS-TGTSHTPAATTGTTQHSTPALSSP---------HPSSRTTESPPSPGTTTPGH 4092
Query: 82 DGGTSRDTFQTVPPNSTTMSLSMREDATILP-SPTSETVLTVAAFG 126
TSR T P + T +T+LP SPTS + TV G
Sbjct: 4093 TTATSRTTATATPSKTRT--------STLLPSSPTSAPITTVVTTG 4130
Score = 34.7 bits (78), Expect = 0.058
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 26 PTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGGT 85
P++T T+++ G TT P SS PG P + L+ST T A S +
Sbjct: 4681 PSLTTTATTITATGS---TTNP-SSTPGTTPITPV-----LTSTATTPAATSSKATSSSS 4731
Query: 86 SRDTFQTVPPNSTTMSLSMREDATILPSPTSETVLTVAA 124
R T T+P ++T + S T +PS T T TV A
Sbjct: 4732 PR-TATTLPVLTSTATKSTATSFTPIPSSTLWTTWTVPA 4769
Score = 30.4 bits (67), Expect = 1.1
Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 18/107 (16%)
Query: 24 SQPTMTQTSSSQGGLGGLSLT-TEPV--------SSNPGYIPSSEANRPSHLSSTGTPGA 74
S T + T ++ G L L+ T T P SS+PG + A R + + T T
Sbjct: 3182 STATASSTRATAGTLKVLTSTATTPTVISSRATPSSSPGTATALPALRSTATTPTATSVT 3241
Query: 75 GVPSSGRDGGTSRDTFQTVPPNSTTMSLSMREDATILPSPTSETVLT 121
+PSS +R + T P + TMS T PS T ETV T
Sbjct: 3242 AIPSSSLGTAWTRLSQTTTP--TATMS-------TATPSSTPETVHT 3279
Score = 29.6 bits (65), Expect = 1.9
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 9/73 (12%)
Query: 49 SSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGGTSRDTFQTVPPNSTTMSLSMREDA 108
SS+PG + A R + + T T +PSS G T QT P +T +
Sbjct: 4501 SSSPGTATALPALRSTATTPTATSFTAIPSSSL-GTTWTRLSQTTTPTATM--------S 4551
Query: 109 TILPSPTSETVLT 121
T PS T ETV T
Sbjct: 4552 TATPSSTPETVHT 4564
Score = 28.1 bits (61), Expect = 5.5
Identities = 31/108 (28%), Positives = 43/108 (39%), Gaps = 16/108 (14%)
Query: 21 GHNSQPTMTQTSSSQGGLGGLSLTTEPV-------SSNPGYIPSSEANRPSHLSSTGTPG 73
G + PT T ++ + + TT V SS+PG + A R + + T T
Sbjct: 1924 GSTATPTSTLRTAPPPKVLTTTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATSV 1983
Query: 74 AGVPSSGRDGGTSRDTFQTVPPNSTTMSLSMREDATILPSPTSETVLT 121
+PSS G T QT P +T +T PS T ET T
Sbjct: 1984 TPIPSSSL-GTTWTRLSQTTTPTATM--------STATPSSTPETAHT 2022
Score = 28.1 bits (61), Expect = 5.5
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 50 SNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGGTSRDTFQTVPPNSTTMSLSMREDAT 109
S+PG + A R + + T T +PSS G T QT P +T +T
Sbjct: 2517 SSPGTATALPALRSTATTPTATSFTAIPSSSL-GTTWTRLSQTTTPTATM--------ST 2567
Query: 110 ILPSPTSETVLT 121
PS T ETV T
Sbjct: 2568 ATPSSTPETVHT 2579
Score = 27.7 bits (60), Expect = 7.1
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 10/95 (10%)
Query: 28 MTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGGTSR 87
+T T+++ G +T SS PG P P L+S T S + R
Sbjct: 4256 LTTTATTTASTG----STATPSSTPGTAPP-----PKVLTSPATTPTATSSKATSSSSPR 4306
Query: 88 DTFQTVPPNSTTMSLSMREDATILPSPTSETVLTV 122
T T+P ++T + S T +PS T T T+
Sbjct: 4307 -TATTLPVLTSTATKSTATSVTPIPSSTLGTTGTL 4340
>gi|28144893 crumbs 3 isoform b precursor [Homo sapiens]
Length = 123
Score = 36.2 bits (82), Expect = 0.020
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 103 SMREDATILPSPTSETV---LTVAAFGVISFIVILVVVVIILVGVVSLRFKCRKSKESED 159
S E++T+LPS TS + L A I + L+ +++ VG+ L K R+ +++E
Sbjct: 32 SANENSTVLPSSTSSSSDGNLRPEAITAIIVVFSLLAALLLAVGLALLVRKLREKRQTEG 91
Query: 160 PQKPGSSGLSESCSTANGEKDS 181
+P S + A +DS
Sbjct: 92 TYRPSSEEQFSHAAEARAPQDS 113
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 34.3 bits (77), Expect = 0.076
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 24/97 (24%)
Query: 44 TTEPVSSNPGY------------------IPSSEANRPSHLSSTGTPGAGVPSS----GR 81
T +PV+S P Y +P++ RPS +ST P P+S R
Sbjct: 1256 TDQPVTSEPTYQATRGRKNRSSVKTPEPVVPTAPELRPS--TSTDRPVTPKPTSRTTRSR 1313
Query: 82 DGGTSRDTFQTVPPNSTTMSLSMREDATILPSPTSET 118
+S T +TV P + + +S D + P PTS T
Sbjct: 1314 TNMSSVKTPETVVPTAPELQISTSTDQPVTPKPTSRT 1350
Score = 30.0 bits (66), Expect = 1.4
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 18/98 (18%)
Query: 24 SQPTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSS---- 79
SQ T ++T+ S T EPV +P++ +PS +ST P P+S
Sbjct: 1143 SQATRSRTNRSS------VKTPEPV------VPTAPELQPS--TSTDQPVTSEPTSQVTR 1188
Query: 80 GRDGGTSRDTFQTVPPNSTTMSLSMREDATILPSPTSE 117
GR +S T +TV P + + S D + PTS+
Sbjct: 1189 GRKSRSSVKTPETVVPTALELQPSTSTDRPVTSEPTSQ 1226
Score = 30.0 bits (66), Expect = 1.4
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 55 IPSSEANRPSHLSSTGTPGAGVPSS----GRDGGTSRDTFQTVPPNSTTMSLSMREDATI 110
+P++ PS +ST P P+S GR +S T +TV P + + S D +
Sbjct: 1408 VPTAPKLEPS--TSTDQPVTPEPTSQATRGRTNRSSVKTPETVVPTAPELQPSTSTDQPV 1465
Query: 111 LPSPTSE 117
P PTS+
Sbjct: 1466 TPEPTSQ 1472
Score = 28.9 bits (63), Expect = 3.2
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 55 IPSSEANRPSHLSSTGTPGAGVPSS----GRDGGTSRDTFQTVPPNSTTMSLSMREDATI 110
+P++ +PS +ST P P+S GR +S T +TV P + + S D +
Sbjct: 1449 VPTAPELQPS--TSTDQPVTPEPTSQATRGRTDRSSVKTPETVVPTAPELQASASTDQPV 1506
Query: 111 LPSPTSET 118
PTS T
Sbjct: 1507 TSEPTSRT 1514
Score = 28.1 bits (61), Expect = 5.5
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
Query: 25 QPTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGG 84
+PT ++T+ S+ + + V P PS+ +P T + GR
Sbjct: 1345 KPT-SRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRA-----TRGRKNR 1398
Query: 85 TSRDTFQTVPPNSTTMSLSMREDATILPSPTSE 117
+S T +T+ P + + S D + P PTS+
Sbjct: 1399 SSGKTPETLVPTAPKLEPSTSTDQPVTPEPTSQ 1431
Score = 27.3 bits (59), Expect = 9.3
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 67 SSTGTPGAGVPSS----GRDGGTSRDTFQTVPPNSTTMSLSMREDATILPSPTS 116
+ST P P+S GR +S T +TV P + + S D + P PTS
Sbjct: 1500 ASTDQPVTSEPTSRTTRGRKNRSSVKTPETVVPAAPELQPSTSTDQPVTPEPTS 1553
>gi|45331215 leucine zipper, putative tumor suppressor 2 [Homo
sapiens]
Length = 669
Score = 34.3 bits (77), Expect = 0.076
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 26 PTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLS--STGTPGAGVPSSGRDG 83
P T S SQG L L P SS+ SS A++P S ++G P + SGR+
Sbjct: 167 PRATGLSGSQGSL--TQLFGGPASSSSSSSSSSAADKPLAFSGWASGCPSGTLSDSGRNS 224
Query: 84 GTSRDTFQTVPPNSTTMS 101
+S T+ T TT S
Sbjct: 225 LSSLPTYSTGGAEPTTSS 242
>gi|28559039 mediator complex subunit 1 [Homo sapiens]
Length = 1581
Score = 33.9 bits (76), Expect = 0.099
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 39 GGLSLTTEPVSSNPGYIPSSEANRP-------SHLSSTGTPGAGVPSSGRDGGTSRDTFQ 91
GG P+ PG PSS+A P SH+S T + SSG G+S Q
Sbjct: 1200 GGSDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTSSSSGMKSSSGL--GSSGSLSQ 1257
Query: 92 TVPPNSTTMSLS 103
PP+S + + S
Sbjct: 1258 KTPPSSNSCTAS 1269
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 33.9 bits (76), Expect = 0.099
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 24 SQPTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDG 83
S T++ TS+ S+TT PV+ PSSE++RPS ++S P P+
Sbjct: 4024 SASTLSATSTPHTST---SVTTRPVT------PSSESSRPSTITSHTIPPTFPPAHSSTP 4074
Query: 84 GTSRDTFQTVPPNS-TTMSLSMREDATILPSPTSET 118
T+ + TV P + TTM+ + PT T
Sbjct: 4075 PTTSASSTTVNPEAVTTMTTRTKPSTRTTSFPTVTT 4110
Score = 32.3 bits (72), Expect = 0.29
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 42 SLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGGTSRDTFQTVPPNSTTMS 101
+L+T PV SN + S+ +SS+ TP G + ++P ++TT++
Sbjct: 1827 TLSTTPVDSNSPVVTSTA------VSSSPTPAEGTSIATSTPSEGSTALTSIPVSTTTVA 1880
Query: 102 LSMREDATILPSPTSETVLTVA 123
S + P+ TS V T A
Sbjct: 1881 SSETNTLSTTPAVTSTPVTTYA 1902
Score = 32.0 bits (71), Expect = 0.38
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 42 SLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGGTSRDTFQTVPPNSTTMS 101
+L+T PV ++ S+EA H S T + G +P+S G++ T+ V +TM
Sbjct: 3124 TLSTTPVDTSTPVTTSTEA----HSSPTTSEGTSMPTSTPSEGSTPLTYMPV----STML 3175
Query: 102 LSMREDATILPSP--TSETVLT 121
+ ED+T+ +P TS V T
Sbjct: 3176 VVSSEDSTLSATPVDTSTPVTT 3197
Score = 31.6 bits (70), Expect = 0.49
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 29 TQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGGTSRD 88
T +SS+ + L+T PV SN S+EA+ S G +P+S G++
Sbjct: 3232 TPVASSEASI----LSTTPVDSNTPLTTSTEASS----SPPTAEGTSMPTSTPSEGSTPL 3283
Query: 89 TFQTVPPNSTTMSLSMREDATILPSPTSETVLT 121
T ++P ++TT++ S + P+ TS V T
Sbjct: 3284 T--SMPVSTTTVASSETSTLSTTPADTSTPVTT 3314
Score = 30.8 bits (68), Expect = 0.84
Identities = 22/74 (29%), Positives = 31/74 (41%)
Query: 42 SLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGGTSRDTFQTVPPNSTTMS 101
+L+T PV SN S+EA+ P + + PS G T T+ +S T +
Sbjct: 1002 TLSTTPVDSNTPLTTSTEASSPPPTAEGTSMPTSTPSEGSTPLTRMPVSTTMVASSETST 1061
Query: 102 LSMREDATILPSPT 115
LS T P T
Sbjct: 1062 LSTTPADTSTPVTT 1075
Score = 30.0 bits (66), Expect = 1.4
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 42 SLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGGTSRDTFQTVPPNSTTMS 101
+L+T PV SN + S+ +SS+ TP G + ++P ++TT++
Sbjct: 1474 TLSTTPVDSNSPVVTSTA------VSSSPTPAEGTSIAISTPSEGSTALTSIPVSTTTVA 1527
Query: 102 LSMREDATILPSPTSETVLT 121
S + P+ TS V T
Sbjct: 1528 SSEINSLSTTPAVTSTPVTT 1547
Score = 29.3 bits (64), Expect = 2.4
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 42 SLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGGTSRDTFQTVPPNSTTMS 101
+L+T PV ++ SSEA+ SST G +P+S G+ T T P ST +
Sbjct: 530 TLSTTPVDTSTPVTTSSEASS----SSTTPEGTSIPTSTPSEGS---TPLTNMPVSTRLV 582
Query: 102 LSMREDATILPSPTSETVLTVAA 124
+S T S T +T ++
Sbjct: 583 VSSEASTTSTTPADSNTFVTTSS 605
Score = 28.1 bits (61), Expect = 5.5
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 42 SLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGGTSRDTFQTVPPNSTTMS 101
+L+T PV ++ S+EA S T + G +P+S GT+ T ++P ++T +
Sbjct: 1709 TLSTTPVDNSTPVTTSTEARS----SPTTSEGTSMPNSTPSEGTTPLT--SIPVSTTPVL 1762
Query: 102 LSMREDATILPSPTSETVLT 121
S + P TS V T
Sbjct: 1763 SSEASTLSATPIDTSTPVTT 1782
Score = 27.7 bits (60), Expect = 7.1
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 42 SLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGGTSRDTFQTVPPNSTTMS 101
+L+T PV ++ S+EA+ S T GA +P+S G++ T ++P + T ++
Sbjct: 707 TLSTTPVDTSTPVTTSTEASS----SPTTADGASMPTSTPSEGSTPLT--SMPVSKTLLT 760
Query: 102 LSMREDATILPSPTSETVLT 121
S + P TS + T
Sbjct: 761 SSEASTLSTTPLDTSTHITT 780
>gi|167736355 mucin 4 isoform a [Homo sapiens]
Length = 5284
Score = 33.5 bits (75), Expect = 0.13
Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 30/130 (23%)
Query: 22 HNSQPT--MTQTSSSQGGLG---GLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGV 76
H +Q T + S+S G + G++ + P + +P +S A RP+ SS +P A
Sbjct: 839 HTTQSTTELLSASASHGAIPVSTGMASSIVPGTFHPTLSEASTAGRPTGQSSPTSPSASP 898
Query: 77 ----------------PSSGRD----GGTSRDTFQTVPP-----NSTTMSLSMREDATIL 111
S G D + DTF TVPP ST ++ E T+
Sbjct: 899 QETAAISRMAQTQRTRTSRGSDTISLASQATDTFSTVPPTPPSITSTGLTSPQTETHTLS 958
Query: 112 PSPTSETVLT 121
PS + +T T
Sbjct: 959 PSGSGKTFTT 968
Score = 27.7 bits (60), Expect = 7.1
Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 11/112 (9%)
Query: 21 GHNSQPTMTQTSSSQGGLGGLSLTTEPVSSNPGY---IPSSEANRPSHLSSTGTPGAGVP 77
GH + +T TSS+ G T P S++ G+ +P ++ + S +T P +
Sbjct: 2908 GHATPLPVTDTSSASTGHANPLHVTSPSSASTGHATPLPVTDTSSASTGHATPLPVTSLS 2967
Query: 78 SSGRDGGT--------SRDTFQTVPPNSTTMSLSMREDATILPSPTSETVLT 121
S T S T T P T S + AT LP ++ + T
Sbjct: 2968 SVSTGDTTPLPVTSPSSASTGHTTPLPVTDTSSASTGQATALPVTSTSSAST 3019
>gi|38787970 tensin like C1 domain containing phosphatase isoform 3
[Homo sapiens]
Length = 1285
Score = 33.5 bits (75), Expect = 0.13
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 26 PTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGG 84
P M SS G +LTTEP + +PG P + A R G G GV S GR G
Sbjct: 380 PPMLSVSSDSGHSS--TLTTEPAAESPGRPPPTAAERQELDRLLG--GCGVASGGRGAG 434
>gi|38787957 tensin like C1 domain containing phosphatase isoform 2
[Homo sapiens]
Length = 1409
Score = 33.5 bits (75), Expect = 0.13
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 26 PTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGG 84
P M SS G +LTTEP + +PG P + A R G G GV S GR G
Sbjct: 504 PPMLSVSSDSGHSS--TLTTEPAAESPGRPPPTAAERQELDRLLG--GCGVASGGRGAG 558
>gi|38787941 tensin like C1 domain containing phosphatase isoform 1
[Homo sapiens]
Length = 1419
Score = 33.5 bits (75), Expect = 0.13
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 26 PTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGG 84
P M SS G +LTTEP + +PG P + A R G G GV S GR G
Sbjct: 514 PPMLSVSSDSGHSS--TLTTEPAAESPGRPPPTAAERQELDRLLG--GCGVASGGRGAG 568
>gi|21040241 crumbs 3 isoform a precursor [Homo sapiens]
Length = 120
Score = 33.5 bits (75), Expect = 0.13
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 103 SMREDATILPSPTSETV---LTVAAFGVISFIVILVVVVIILVGVVSLRFKCRKSKESED 159
S E++T+LPS TS + L A I + L+ +++ VG+ L K R+ +++E
Sbjct: 32 SANENSTVLPSSTSSSSDGNLRPEAITAIIVVFSLLAALLLAVGLALLVRKLREKRQTEG 91
Query: 160 PQKPGS 165
+P S
Sbjct: 92 TYRPSS 97
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
sapiens]
Length = 3969
Score = 32.7 bits (73), Expect = 0.22
Identities = 31/118 (26%), Positives = 44/118 (37%), Gaps = 16/118 (13%)
Query: 24 SQPTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDG 83
SQ T TS S GL S VS P+S A+ P H++ T G P G
Sbjct: 3320 SQDTSHLTSGSVSGLASSSSVLNVVSMQTTTTPTSSASVPGHVTLTNPRLLGTPDIG--- 3376
Query: 84 GTSRDTFQTVPPNSTTMSLSMREDATILPSP--------TSETVLTVAAFGVISFIVI 133
+ + ++ SL +++ LP TS+T T A S V+
Sbjct: 3377 -----SISNLLIKASQQSLGIQDQPVALPPSSGMFPQLGTSQTPSTAAITAASSICVL 3429
>gi|119829187 alpha 1 type XVII collagen [Homo sapiens]
Length = 1497
Score = 32.7 bits (73), Expect = 0.22
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Query: 20 RGHNSQPTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGA-GVPS 78
RGH + + S+S GL+L P P P + P G PGA G+PS
Sbjct: 926 RGHQGEQGLPGFSTSGSSSFGLNLQGPPGPPGPQG-PKGDKGDP------GVPGALGIPS 978
Query: 79 SGRDGGTSRDTFQTVPP 95
+GG+S + + PP
Sbjct: 979 GPSEGGSSSTMYVSGPP 995
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 32.3 bits (72), Expect = 0.29
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 23 NSQPTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRD 82
+S PT + SSSQG G + PVS +PG + EA S+T P +
Sbjct: 1136 SSLPTPAK-SSSQGDHGSAAERGGPVSRSPGAPSAGEAEARPSPSTTPLPDSSPSRKPPP 1194
Query: 83 GGTSRDTFQTVPPNSTTMSLSMREDAT----ILPSPTS 116
F VPP ++ E+ + +PSPT+
Sbjct: 1195 ISKKPKLFLVVPPPQKDFAVEPAENVSEALRAVPSPTT 1232
>gi|16933557 dachsous 1 precursor [Homo sapiens]
Length = 3298
Score = 32.3 bits (72), Expect = 0.29
Identities = 39/174 (22%), Positives = 71/174 (40%), Gaps = 18/174 (10%)
Query: 20 RGHNSQPTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLS-STGTPGAGVPS 78
RGH+ Q + GG GL L + SS Y ++ +L + PG+G +
Sbjct: 2828 RGHSLGHV--QATDEDGGADGLVLYSLATSSP--YFGINQTTGALYLRVDSRAPGSGTAT 2883
Query: 79 SGRDGGTSRDTFQTV-----------PPNSTTMSLSMREDATILPSPTSETVLTVAAFGV 127
SG G T R+ + + S T+ +++ T L +L V A
Sbjct: 2884 SGGGGRTRREAPRELRLEVIARGPLPGSRSATVPVTVDITHTALGLAPDLNLLLVGAVAA 2943
Query: 128 ISFIVILVVVVIILVGVVSLRFKCRKSKESEDPQKPGSSGLSESCSTANGEKDS 181
+V+++ + +++G+V R + RK++ + P + S+S E S
Sbjct: 2944 SLGVVVVLALAALVLGLV--RARSRKAEAAPGPMSQAAPLASDSLQKLGREPPS 2995
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 32.0 bits (71), Expect = 0.38
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 21 GHNSQPTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSG 80
G +++P +T +S++ + + T+ ++ G +P + A +S GT + +S
Sbjct: 1381 GKHTEPPVT-SSATTTSVAPPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSF 1439
Query: 81 RDGGTSRDTFQTVPPNSTTMSLSMREDATILPSPTSETVLTVAAFGVISFIVILVVVVII 140
G S+ T TVPP++ P PT+ +F +SF +L
Sbjct: 1440 SFG--SQQTNSTVPPSA--------------PPPTTAATPLPTSFPTLSFGSLLSSATTP 1483
Query: 141 LVGVVSLRFKCRKSKESEDPQKPGSSGLSESCSTANGEKDSITL 184
+ + + R ++ S P+KPG S +S S ++ E+ S L
Sbjct: 1484 SLPMSAGR-STEEATSSALPEKPGDSEVSASAASLLEEQQSAQL 1526
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 32.0 bits (71), Expect = 0.38
Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Query: 26 PTMTQTSSSQGGLG-GLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGG 84
PT T + +S LG G TT S PG S+ + +ST TPG S+
Sbjct: 3894 PTTTLSPASMTSLGVGEESTTS--RSQPGSTHSTVSP-----ASTTTPGLSEESTTVYSS 3946
Query: 85 TSRDTFQTVPPNSTTMSLSMREDATILPSPTS 116
+ T TV P STT S+ E T P S
Sbjct: 3947 SPGSTETTVFPRSTTTSVRREEPTTFHSRPAS 3978
Score = 31.6 bits (70), Expect = 0.49
Identities = 31/92 (33%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 26 PTMTQTSSSQGGLG-GLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGG 84
PT T + +S LG G TT S PG S+ + +ST TPG S+
Sbjct: 1254 PTTTLSPASMTSLGVGEESTTS--RSQPGSTHSTVSP-----ASTTTPGLSEESTTVYSS 1306
Query: 85 TSRDTFQTVPPNSTTMSLSMREDATILPSPTS 116
+ T TV P+STT S+ E T P S
Sbjct: 1307 SRGSTETTVFPHSTTTSVHGEEPTTFHSRPAS 1338
Score = 31.2 bits (69), Expect = 0.64
Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Query: 26 PTMTQTSSSQGGLG-GLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGG 84
PT T + +S LG G TT S PG S+ + +ST TPG S+
Sbjct: 2811 PTTTLSPASMTSLGVGEESTTS--RSQPGSTHSTVSP-----ASTTTPGLSEESTTVYSS 2863
Query: 85 TSRDTFQTVPPNSTTMSLSMREDATILPSPTS 116
+ T TV P STT S+ E T P S
Sbjct: 2864 SPGSTETTVFPRSTTTSVRGEEPTTFHSRPAS 2895
Score = 27.7 bits (60), Expect = 7.1
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 27 TMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPS-SGRDGGT 85
T++ S++ G+ S T+ S PG + + ST TPG S +
Sbjct: 2062 TLSPASTTSSGVSEESTTSH---SRPG-----STHTTAFPDSTTTPGLSRHSTTSHSSPG 2113
Query: 86 SRDTFQTVPPNSTTMSLSMREDATILPSP-TSETVLTVAAFGVISF 130
S DT T+ P STT S +E T SP +++T L+ + +SF
Sbjct: 2114 STDT--TLLPASTTTSGPSQESTTSHSSPGSTDTALSPGSTTALSF 2157
>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
sapiens]
Length = 2036
Score = 31.6 bits (70), Expect = 0.49
Identities = 31/92 (33%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 26 PTMTQTSSSQGGLG-GLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGG 84
PT T + +S LG G TT S PG S+ + +ST TPG S+
Sbjct: 741 PTTTLSPASMTSLGVGEESTTS--RSQPGSTHSTVSP-----ASTTTPGLSEESTTVYSS 793
Query: 85 TSRDTFQTVPPNSTTMSLSMREDATILPSPTS 116
+ T TV P+STT S+ E T P S
Sbjct: 794 SRGSTETTVFPHSTTTSVHGEEPTTFHSRPAS 825
>gi|6912602 ADP-ribosylation factor interacting protein 2 [Homo
sapiens]
Length = 341
Score = 31.6 bits (70), Expect = 0.49
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 9/50 (18%)
Query: 24 SQPTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPG 73
S P + +TS GG GG S G IP+ PSH ++ PG
Sbjct: 41 SGPNLNETSIVSGGYGG---------SGDGLIPTGSGRHPSHSTTPSGPG 81
>gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens]
Length = 1446
Score = 31.6 bits (70), Expect = 0.49
Identities = 25/83 (30%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Query: 20 RGHNSQPTMTQTSSSQGGLGGLSLTT-EPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPS 78
+G SQ ++ Q S+SQ S + P NP +S AN S G+P PS
Sbjct: 655 QGSPSQGSLRQESTSQASPSQRSTSQGSPSQVNPSQRSTSHANSSQGSPSQGSPSQESPS 714
Query: 79 SGRDGGTSRDTFQTVPPNSTTMS 101
G S T+ TT S
Sbjct: 715 QGSTSQASPSHRNTIGVIGTTSS 737
>gi|15042969 transmembrane protein 27 [Homo sapiens]
Length = 222
Score = 31.6 bits (70), Expect = 0.49
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 108 ATILPSPTSETVLTVAAFGVISFIVILVVVVIILVGVVSLRFKCRKSKESEDPQ 161
+T+ P + + FGVI I+I+ + ++IL G+ R K ++ E +D +
Sbjct: 130 STLAPPMDPSVPIWIIIFGVIFCIIIVAIALLILSGIWQRRRKNKEPSEVDDAE 183
>gi|197383100 PDZ and LIM domain 5 isoform b [Homo sapiens]
Length = 487
Score = 31.2 bits (69), Expect = 0.64
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 9/87 (10%)
Query: 20 RGHNSQPTMTQTSSSQGGLGGLSLTTE-PVSSNPGYIPSSEANRPSHLSSTGT------- 71
+ +NSQ Q +SS + + + P S PG + A + STG
Sbjct: 196 KANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTAAAAFKPVGSTGVIKSPSWQ 255
Query: 72 -PGAGVPSSGRDGGTSRDTFQTVPPNS 97
P GVPS+GR ++ + P NS
Sbjct: 256 RPNQGVPSTGRISNSATYSGSVAPANS 282
>gi|197383077 PDZ and LIM domain 5 isoform a [Homo sapiens]
Length = 596
Score = 31.2 bits (69), Expect = 0.64
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 9/87 (10%)
Query: 20 RGHNSQPTMTQTSSSQGGLGGLSLTTE-PVSSNPGYIPSSEANRPSHLSSTGT------- 71
+ +NSQ Q +SS + + + P S PG + A + STG
Sbjct: 305 KANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTAAAAFKPVGSTGVIKSPSWQ 364
Query: 72 -PGAGVPSSGRDGGTSRDTFQTVPPNS 97
P GVPS+GR ++ + P NS
Sbjct: 365 RPNQGVPSTGRISNSATYSGSVAPANS 391
>gi|116812565 zinc finger protein, subfamily 1A, 5 [Homo sapiens]
Length = 419
Score = 31.2 bits (69), Expect = 0.64
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 23 NSQPTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRD 82
+ +P M Q S+Q + +S + SS P+S RPSH +P AG PSS
Sbjct: 282 DEKPFMIQQPSTQAVVSAVSASIPQSSS-----PTSPEPRPSHSQRNYSPVAG-PSSEPS 335
Query: 83 GGTSRDTFQTVPPNSTTMSLSMRE 106
TS + P++ +L +++
Sbjct: 336 AHTSTPSIGNSQPSTPAPALPVQD 359
>gi|169217460 PREDICTED: similar to Mucin-6, partial [Homo sapiens]
Length = 350
Score = 30.8 bits (68), Expect = 0.84
Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 5/164 (3%)
Query: 26 PTMTQTSSSQGGLGGLSLTTEPVSSNPGYIPSSEANRPSHLSSTGTPGAGVPSSGRDGGT 85
P +T T++++ S+ + ++ SS P S T + V S+G T
Sbjct: 111 PEVTPTATTKITTNPTSIGSSTPMAHTTSATSSRLTTPFTTHSPSTGSSPVSSTGPMTAT 170
Query: 86 SRDTFQTVPPNS---TTMSLSMREDATILPSPTSETVLTVAAFGVISFIVILVVVVIILV 142
S T T P S TT+ + +T L +P++ TV+T + + I +
Sbjct: 171 SFQTTTTYPTPSLSQTTLPTYVPPFSTSLVTPSTHTVITPPRTQMATSASIHSTPTGTIP 230
Query: 143 GVVSLRFKCRKSKESEDPQKPGSSGLSESCSTANGEKDSITLIS 186
+L K S + + +SG S++ S+ N K S +L S
Sbjct: 231 PPTTL--KATGSTHTAPTRTLTTSGTSQALSSLNTAKTSTSLHS 272
>gi|67010025 Sp4 transcription factor [Homo sapiens]
Length = 784
Score = 30.8 bits (68), Expect = 0.84
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 70 GTPGAGVPSSGRDGGTSRDTFQTVPPNSTTMSLSMREDATILPSPTSETVLTVAA 124
GT G P++ D GTS P +TT S S T+ SP+S T T A
Sbjct: 279 GTGQVGQPAATADSGTSNGNQLVSTPTNTTTSAS-----TMPESPSSSTTCTTTA 328
>gi|126365795 potassium channel, subfamily K, member 2 isoform c
[Homo sapiens]
Length = 426
Score = 30.8 bits (68), Expect = 0.84
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 15/92 (16%)
Query: 55 IPSSEANRPSHLSSTGTPGAGVPSSGRDGGTSRDTFQTVPPNSTTMSLSMREDATILPSP 114
+PS+ RP + + P P S R +F T P T+L S
Sbjct: 2 LPSASRERPGYRAGVAAPDLLDPKSAAQNSKPRLSFSTKP--------------TVLASR 47
Query: 115 T-SETVLTVAAFGVISFIVILVVVVIILVGVV 145
S+T + V + +S I ++VV+ +I+ V
Sbjct: 48 VESDTTINVMKWKTVSTIFLVVVLYLIIGATV 79
>gi|24308326 BR serine/threonine kinase 1 [Homo sapiens]
Length = 778
Score = 30.8 bits (68), Expect = 0.84
Identities = 27/79 (34%), Positives = 31/79 (39%), Gaps = 16/79 (20%)
Query: 20 RGHNSQPTMTQTSSSQGGLGG--------LSLTTEPVSSNPGYIPSSEANRPSH------ 65
RG S + TQT S+G GG S + P+ PG P S P H
Sbjct: 466 RGGGSPTSKTQTLPSRGPRGGGAGEQPPPPSARSTPLPGPPG-SPRSSGGTPLHSPLHTP 524
Query: 66 -LSSTGTPGAGVPSSGRDG 83
S TGTPG P S G
Sbjct: 525 RASPTGTPGTTPPPSPGGG 543
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,190,918
Number of Sequences: 37866
Number of extensions: 387118
Number of successful extensions: 2095
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 1895
Number of HSP's gapped (non-prelim): 291
length of query: 205
length of database: 18,247,518
effective HSP length: 97
effective length of query: 108
effective length of database: 14,574,516
effective search space: 1574047728
effective search space used: 1574047728
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.