Guide to the Human Genome
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Name: LZTS2 Sequence: fasta or formatted (669aa) NCBI GI: 45331215
Description:

leucine zipper, putative tumor suppressor 2

Referenced in:

Additional Cell Cycle Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         68           3
 C cysteine            1.8         12           1
 D aspartate           3.0         20           2
 E glutamate          10.3         69           2
 F phenylalanine       1.8         12           2
 G glycine             8.2         55           2
 H histidine           1.6         11           2
 I isoleucine          1.8         12           1
 K lysine              3.0         20           1
 L leucine            11.1         74           2
 M methionine          0.9          6           1
 N asparagine          1.0          7           1
 P proline             9.0         60           8
 Q glutamine           8.2         55           2
 R arginine            9.4         63           3
 S serine              9.7         65          10
 T threonine           3.6         24           2
 V valine              3.7         25           1
 W tryptophan          0.6          4           1
 Y tyrosine            1.0          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine zipper, putative tumor suppressor 2 
ProSAPiP1             0.229   ProSAPiP1 protein 
LZTS1                 0.222   leucine zipper, putative tumor suppressor 1 
N4BP3                 0.131   Nedd4 binding protein 3 
CROCC                 0.044   ciliary rootlet coiled-coil 
DCTN1                 0.043   dynactin 1 isoform 1 
PLEC1                 0.043   plectin 1 isoform 11 
PLEC1                 0.043   plectin 1 isoform 10 
PLEC1                 0.043   plectin 1 isoform 8 
PLEC1                 0.043   plectin 1 isoform 7 
PLEC1                 0.043   plectin 1 isoform 6 
PLEC1                 0.043   plectin 1 isoform 3 
PLEC1                 0.043   plectin 1 isoform 2 
PLEC1                 0.043   plectin 1 isoform 1 
DCTN1                 0.041   dynactin 1 isoform 3 
GOLGA8B               0.040   golgi autoantigen, golgin subfamily a, 8B 
GOLGA8A               0.040   golgi autoantigen, golgin subfamily a, 8A 
DCTN1                 0.040   dynactin 1 isoform 4 
DCTN1                 0.040   dynactin 1 isoform 2 
TCHH                  0.038   trichohyalin 
LOC653061             0.038   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.038   PREDICTED: similar to Golgin subfamily A member 8-l...
ZNF853                0.037   zinc finger protein 853 
LOC100133758          0.036   PREDICTED: hypothetical protein, partial 
LOC653061             0.035   PREDICTED: similar to Golgin subfamily A member 8-l...
CEP250                0.035   centrosomal protein 2 
LOC653061             0.035   PREDICTED: similar to Golgin subfamily A member 8-l...
CGNL1                 0.035   cingulin-like 1 
FYCO1                 0.035   FYVE and coiled-coil domain containing 1 
MYH14                 0.034   myosin, heavy chain 14 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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