Guide to the Human Genome
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Name: CRB3 Sequence: fasta or formatted (123aa) NCBI GI: 28144893
Description:

crumbs 3 isoform b precursor

Referenced in:

Epidermal Growth Factor
PDZ Domain

Other entries for this name:
alt prot [120aa] crumbs 3 isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.2         15           2
 C cysteine            0.8          1           1
 D aspartate           1.6          2           1
 E glutamate           6.5          8           2
 F phenylalanine       2.4          3           1
 G glycine             7.3          9           1
 H histidine           0.8          1           1
 I isoleucine          4.1          5           2
 K lysine              2.4          3           1
 L leucine            16.3         20           3
 M methionine          0.8          1           1
 N asparagine          3.3          4           1
 P proline             5.7          7           1
 Q glutamine           4.9          6           1
 R arginine            6.5          8           1
 S serine             10.6         13           4
 T threonine           6.5          8           2
 V valine              4.9          6           2
 W tryptophan          1.6          2           1
 Y tyrosine            0.8          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   crumbs 3 isoform b precursor 
CRB3                  0.780   crumbs 3 isoform a precursor 
ECSCR                 0.051   endothelial cell-specific chemotaxis regulator [Hom...
CRB2                  0.047   crumbs homolog 2 
SLITRK5               0.042   SLIT and NTRK-like family, member 5 
ADRM1                 0.037   adhesion regulating molecule 1 precursor 
ADRM1                 0.037   adhesion regulating molecule 1 precursor 
LILRB1                0.033   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB1                0.033   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB2                0.028   leukocyte immunoglobulin-like receptor, subfamily B...
PTPRCAP               0.023   protein tyrosine phosphatase, receptor type, C-associ...
LILRB1                0.023   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB1                0.023   leukocyte immunoglobulin-like receptor, subfamily B...
LRRC4                 0.023   leucine rich repeat containing 4 
PTPRA                 0.019   protein tyrosine phosphatase, receptor type, A isofor...
CRB1                  0.019   crumbs homolog 1 precursor 
RNF170                0.019   ring finger protein 170 isoform b 
RNF170                0.019   ring finger protein 170 isoform a 
RNF170                0.019   ring finger protein 170 isoform a 
LILRB2                0.019   leukocyte immunoglobulin-like receptor, subfamily B...
DIS3L2                0.019   DIS3 mitotic control homolog (S. cerevisiae)-like 2...
PCDH18                0.019   protocadherin 18 precursor 
CD300LG               0.014   CD300 molecule-like family member g 
DNHD1                 0.014   dynein heavy chain domain 1 isoform 1 
MED13                 0.014   mediator complex subunit 13 
C20orf151             0.014   hypothetical protein LOC140893 
TMEM108               0.014   transmembrane protein 108 
TMEM108               0.014   transmembrane protein 108 
MDM2                  0.009   mouse double minute 2 homolog isoform MDM2a 
HSPG2                 0.009   heparan sulfate proteoglycan 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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