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Search of human proteins with 239751647
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751647 PREDICTED: hypothetical protein XP_002347957 [Homo
sapiens]
(150 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757158 PREDICTED: hypothetical protein [Homo sapiens] 309 5e-85
gi|239751647 PREDICTED: hypothetical protein XP_002347957 [Homo ... 309 5e-85
gi|239746157 PREDICTED: hypothetical protein XP_002343679 [Homo ... 307 2e-84
gi|19924099 synapsin I isoform Ia [Homo sapiens] 47 8e-06
gi|19924097 synapsin I isoform Ib [Homo sapiens] 47 8e-06
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens] 45 2e-05
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 44 7e-05
gi|239756550 PREDICTED: hypothetical protein XP_002344932 [Homo ... 43 1e-04
gi|239745514 PREDICTED: hypothetical protein XP_002343509 [Homo ... 43 1e-04
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 42 1e-04
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 42 1e-04
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 42 1e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 42 2e-04
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 42 2e-04
gi|169210256 PREDICTED: hypothetical protein [Homo sapiens] 42 3e-04
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 41 3e-04
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 41 3e-04
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 41 3e-04
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 41 4e-04
gi|89040432 PREDICTED: hypothetical protein [Homo sapiens] 41 4e-04
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 41 4e-04
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 41 4e-04
gi|190886435 RALBP1 associated Eps domain containing 1 isoform a... 40 6e-04
gi|190886437 RALBP1 associated Eps domain containing 1 isoform b... 40 6e-04
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 40 6e-04
gi|153792042 G protein-coupled receptor 178 [Homo sapiens] 40 6e-04
gi|169207782 PREDICTED: hypothetical protein [Homo sapiens] 40 7e-04
gi|169207076 PREDICTED: hypothetical protein [Homo sapiens] 40 7e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 40 7e-04
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 40 0.001
>gi|239757158 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 309 bits (792), Expect = 5e-85
Identities = 150/150 (100%), Positives = 150/150 (100%)
Query: 1 MAVLPNIMTCRRLAEAVEGVGMHQLAVQKAAHLLHVAPGRRPTQPVAGANLLQQHVDTGG 60
MAVLPNIMTCRRLAEAVEGVGMHQLAVQKAAHLLHVAPGRRPTQPVAGANLLQQHVDTGG
Sbjct: 1 MAVLPNIMTCRRLAEAVEGVGMHQLAVQKAAHLLHVAPGRRPTQPVAGANLLQQHVDTGG 60
Query: 61 LQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSR 120
LQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSR
Sbjct: 61 LQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSR 120
Query: 121 RTARGWEPGPTLGRPRGPARRPPLGGRVSP 150
RTARGWEPGPTLGRPRGPARRPPLGGRVSP
Sbjct: 121 RTARGWEPGPTLGRPRGPARRPPLGGRVSP 150
>gi|239751647 PREDICTED: hypothetical protein XP_002347957 [Homo
sapiens]
Length = 150
Score = 309 bits (792), Expect = 5e-85
Identities = 150/150 (100%), Positives = 150/150 (100%)
Query: 1 MAVLPNIMTCRRLAEAVEGVGMHQLAVQKAAHLLHVAPGRRPTQPVAGANLLQQHVDTGG 60
MAVLPNIMTCRRLAEAVEGVGMHQLAVQKAAHLLHVAPGRRPTQPVAGANLLQQHVDTGG
Sbjct: 1 MAVLPNIMTCRRLAEAVEGVGMHQLAVQKAAHLLHVAPGRRPTQPVAGANLLQQHVDTGG 60
Query: 61 LQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSR 120
LQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSR
Sbjct: 61 LQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSR 120
Query: 121 RTARGWEPGPTLGRPRGPARRPPLGGRVSP 150
RTARGWEPGPTLGRPRGPARRPPLGGRVSP
Sbjct: 121 RTARGWEPGPTLGRPRGPARRPPLGGRVSP 150
>gi|239746157 PREDICTED: hypothetical protein XP_002343679 [Homo
sapiens]
Length = 150
Score = 307 bits (787), Expect = 2e-84
Identities = 149/150 (99%), Positives = 149/150 (99%)
Query: 1 MAVLPNIMTCRRLAEAVEGVGMHQLAVQKAAHLLHVAPGRRPTQPVAGANLLQQHVDTGG 60
MAVLPNIMTCRRLAEAVEGVGMHQL VQKAAHLLHVAPGRRPTQPVAGANLLQQHVDTGG
Sbjct: 1 MAVLPNIMTCRRLAEAVEGVGMHQLPVQKAAHLLHVAPGRRPTQPVAGANLLQQHVDTGG 60
Query: 61 LQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSR 120
LQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSR
Sbjct: 61 LQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSR 120
Query: 121 RTARGWEPGPTLGRPRGPARRPPLGGRVSP 150
RTARGWEPGPTLGRPRGPARRPPLGGRVSP
Sbjct: 121 RTARGWEPGPTLGRPRGPARRPPLGGRVSP 150
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 46.6 bits (109), Expect = 8e-06
Identities = 42/137 (30%), Positives = 53/137 (38%), Gaps = 12/137 (8%)
Query: 11 RRLAEAVEGVGMHQLAVQKAAHLLHVAPGRRPTQPVAGANLLQQHVDTGGLQSPPPRPS- 69
+R +A G G H A L GR+ +Q AG Q+ GG P P P
Sbjct: 421 QRQRDASPGRGSHGQTPSPGALPL----GRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQR 476
Query: 70 --PALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSRRTARGWE 127
P L R + + G G P + LP RLPSP P + A +G +
Sbjct: 477 QGPPLQQRPPPQGQQHLS----GLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQ 532
Query: 128 PGPTLGRPRG-PARRPP 143
P G P PA RPP
Sbjct: 533 SRPVAGGPGAPPAARPP 549
Score = 38.9 bits (89), Expect = 0.002
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 19/108 (17%)
Query: 53 QQHVDTGGLQSPPPRPSPALSARSSRRALARTALP---GRGR------GAPGCAALPSRL 103
QQH+ G + P P S S+ + A A P G+GR G PG A P+
Sbjct: 490 QQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPG--APPAAR 547
Query: 104 PSPRPRPSRRAPPPVSRR--TARGWEPGPTLGRP------RGPARRPP 143
P P P R+A PP + R + G P G P +GP ++PP
Sbjct: 548 PPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPP 595
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 46.6 bits (109), Expect = 8e-06
Identities = 42/137 (30%), Positives = 53/137 (38%), Gaps = 12/137 (8%)
Query: 11 RRLAEAVEGVGMHQLAVQKAAHLLHVAPGRRPTQPVAGANLLQQHVDTGGLQSPPPRPS- 69
+R +A G G H A L GR+ +Q AG Q+ GG P P P
Sbjct: 421 QRQRDASPGRGSHGQTPSPGALPL----GRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQR 476
Query: 70 --PALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSRRTARGWE 127
P L R + + G G P + LP RLPSP P + A +G +
Sbjct: 477 QGPPLQQRPPPQGQQHLS----GLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQ 532
Query: 128 PGPTLGRPRG-PARRPP 143
P G P PA RPP
Sbjct: 533 SRPVAGGPGAPPAARPP 549
Score = 38.9 bits (89), Expect = 0.002
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 19/108 (17%)
Query: 53 QQHVDTGGLQSPPPRPSPALSARSSRRALARTALP---GRGR------GAPGCAALPSRL 103
QQH+ G + P P S S+ + A A P G+GR G PG A P+
Sbjct: 490 QQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPG--APPAAR 547
Query: 104 PSPRPRPSRRAPPPVSRR--TARGWEPGPTLGRP------RGPARRPP 143
P P P R+A PP + R + G P G P +GP ++PP
Sbjct: 548 PPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPP 595
>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
Length = 748
Score = 45.4 bits (106), Expect = 2e-05
Identities = 42/126 (33%), Positives = 56/126 (44%), Gaps = 18/126 (14%)
Query: 20 VGMHQLAVQKAAHLLHVAPGRRPTQ---PVAGANLLQQHVDTGGLQSPPPRPSPALSARS 76
V Q AVQ A VAPG + +Q P+ + Q V T PPP+PSP S
Sbjct: 363 VQQQQTAVQTAQAAQMVAPGVQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPS 422
Query: 77 SRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSRRTARGW---EPGPTLG 133
S+ P + + S LPSP P+PS+ PV+ RT + + PGP L
Sbjct: 423 SQ--------PNSNVSSGPAPSPSSFLPSPSPQPSQ---SPVTARTPQNFSVPSPGP-LN 470
Query: 134 RPRGPA 139
P P+
Sbjct: 471 TPVNPS 476
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 43.5 bits (101), Expect = 7e-05
Identities = 35/114 (30%), Positives = 44/114 (38%), Gaps = 17/114 (14%)
Query: 38 PGRRPTQPVAGANLLQQHVDTGGLQSPPPRPSP--ALSARSSRRALARTALPGRGRGAPG 95
PG+ P G N Q PPPRP + ++ PG+ G P
Sbjct: 75 PGKPEGPPPQGGNQSQ---------GPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPP 125
Query: 96 CAALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPLGGRVS 149
S+ P PRP PPP ++G P P G+P GP PP GG S
Sbjct: 126 QGGNQSQGPPPRPGKP-EGPPPQGGNQSQG--PPPRPGKPEGP---PPQGGNQS 173
Score = 42.4 bits (98), Expect = 1e-04
Identities = 40/129 (31%), Positives = 47/129 (36%), Gaps = 26/129 (20%)
Query: 38 PGRRPTQPVAGANLLQQHVDTGGL------------QSPPPRPS-----PALSARSSRRA 80
PG+ QP G N Q G Q PPPRP P S+
Sbjct: 96 PGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGP 155
Query: 81 LARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPAR 140
R PG+ G P S+ P P P PPP ++G P P G+P GP
Sbjct: 156 PPR---PGKPEGPPPQGGNQSQGPPPHPGKP-EGPPPQGGNQSQG--PPPRPGKPEGP-- 207
Query: 141 RPPLGGRVS 149
PP GG S
Sbjct: 208 -PPQGGNQS 215
Score = 38.1 bits (87), Expect = 0.003
Identities = 34/114 (29%), Positives = 41/114 (35%), Gaps = 24/114 (21%)
Query: 38 PGRRPTQPVAGANLLQQHVDTGGLQSPPPRPS-----PALSARSSRRALARTALPGRGRG 92
PG+ P G N Q PPPRP P S+ R PG+ G
Sbjct: 180 PGKPEGPPPQGGNQSQ---------GPPPRPGKPEGPPPQGGNQSQGPPPR---PGKPEG 227
Query: 93 APGCAALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPLGG 146
P + P P P + PP + R P GRP+GP PP GG
Sbjct: 228 PPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQR----PPPPGRPQGP---PPPGG 274
Score = 37.4 bits (85), Expect = 0.005
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 6/86 (6%)
Query: 64 PPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSRRTA 123
PPP + ++ PG+ G P S+ P PRP PP ++
Sbjct: 52 PPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQ 111
Query: 124 RGWEPGPTLGRPRGPARRPPLGGRVS 149
P P G+P GP PP GG S
Sbjct: 112 ---GPPPRPGKPEGP---PPQGGNQS 131
Score = 33.9 bits (76), Expect = 0.053
Identities = 32/117 (27%), Positives = 41/117 (35%), Gaps = 20/117 (17%)
Query: 38 PGRRPTQPVAGANLLQQHVDTGGLQSPPPRPSPALS--ARSSRRALARTALPGRGRGAPG 95
PG+ P G N Q PPPRP ++ + PG+ +G P
Sbjct: 201 PGKPEGPPPQGGNQSQ---------GPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPP 251
Query: 96 CAALPSRLPSPRPRPSRRAPP--------PVSRRTARGWEPGPTLGRP-RGPARRPP 143
+ P P RP PP P +G P P GRP R P +PP
Sbjct: 252 QEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQPP 308
Score = 33.5 bits (75), Expect = 0.069
Identities = 36/126 (28%), Positives = 43/126 (34%), Gaps = 28/126 (22%)
Query: 38 PGRRPTQPVAGANLLQQHVDTGGLQSPPPRPS-----PALSARSSRRALARTALPGRGRG 92
PG+ P G N Q PPP P P S+ R PG+ G
Sbjct: 159 PGKPEGPPPQGGNQSQ---------GPPPHPGKPEGPPPQGGNQSQGPPPR---PGKPEG 206
Query: 93 APGCAALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPA--------RRPPL 144
P S+ P PRP PP +G P P G+P+GP R PP
Sbjct: 207 PPPQGGNQSQGPPPRPGKPE-GPPSQGGNKPQGPPPHP--GKPQGPPPQEGNKPQRPPPP 263
Query: 145 GGRVSP 150
G P
Sbjct: 264 GRPQGP 269
Score = 32.7 bits (73), Expect = 0.12
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 16/90 (17%)
Query: 69 SPALSARSSRRAL--------ARTALPGRGRGA-PGCAALPSRLPSPRPRPSRRAPPPVS 119
S AL A SS ++L + + + G+ G P P R P P +P R PP
Sbjct: 7 SVALLALSSAQSLNEDVSQEESPSVISGKPEGRRPQGGNQPQRTPPPPGKPEGR--PPQG 64
Query: 120 RRTARGWEPGPTLGRPRGPARRPPLGGRVS 149
++G P P G+P GP PP GG S
Sbjct: 65 GNQSQG--PPPRPGKPEGP---PPQGGNQS 89
>gi|239756550 PREDICTED: hypothetical protein XP_002344932 [Homo
sapiens]
Length = 177
Score = 42.7 bits (99), Expect = 1e-04
Identities = 41/97 (42%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 66 PRPSPALSARSSRRALARTALPGR---GRGAPGCAALPSRLP----SPRPRPSRRAPP-P 117
P PSP R L A PGR G +P A PS +P SPRP RRAPP P
Sbjct: 31 PGPSPR-RGRLPSGGLRLRARPGRRALGLPSPLELAAPSLVPNASASPRPVSCRRAPPRP 89
Query: 118 VSRRTARGWEPGPTLGRPRGPA--RRPPLG--GRVSP 150
V P P G P GPA R PLG GR +P
Sbjct: 90 VPGAARWRGRPEPRPGSPAGPAPTRARPLGAPGRSAP 126
>gi|239745514 PREDICTED: hypothetical protein XP_002343509 [Homo
sapiens]
Length = 177
Score = 42.7 bits (99), Expect = 1e-04
Identities = 41/97 (42%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 66 PRPSPALSARSSRRALARTALPGR---GRGAPGCAALPSRLP----SPRPRPSRRAPP-P 117
P PSP R L A PGR G +P A PS +P SPRP RRAPP P
Sbjct: 31 PGPSPR-RGRLPSGGLRLRARPGRRALGLPSPLELAAPSLVPNASASPRPVSCRRAPPRP 89
Query: 118 VSRRTARGWEPGPTLGRPRGPA--RRPPLG--GRVSP 150
V P P G P GPA R PLG GR +P
Sbjct: 90 VPGAARWRGRPEPRPGSPAGPAPTRARPLGAPGRSAP 126
>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 42.4 bits (98), Expect = 1e-04
Identities = 35/93 (37%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 59 GGLQSPPPRPSPALSARSSRRAL----ARTALPGRGRGAPGCAALPSRLPSPRPRPSRRA 114
GG SP R A +A ++R+A +R+A A CA LP R PR +RR
Sbjct: 164 GGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPRR---PRGAGARRG 220
Query: 115 PPPVSRRTARGWEPGPTLGRPRGPARRPPLGGR 147
+ RR G P P RPRGP R P G R
Sbjct: 221 ---MRRRLGAGERPAP---RPRGPPRAPARGAR 247
>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
Length = 255
Score = 42.4 bits (98), Expect = 1e-04
Identities = 35/93 (37%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 59 GGLQSPPPRPSPALSARSSRRAL----ARTALPGRGRGAPGCAALPSRLPSPRPRPSRRA 114
GG SP R A +A ++R+A +R+A A CA LP R PR +RR
Sbjct: 164 GGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPRR---PRGAGARRG 220
Query: 115 PPPVSRRTARGWEPGPTLGRPRGPARRPPLGGR 147
+ RR G P P RPRGP R P G R
Sbjct: 221 ---MRRRLGAGERPAP---RPRGPPRAPARGAR 247
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 42.4 bits (98), Expect = 1e-04
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 17/129 (13%)
Query: 28 QKAAHLLHVAPGRRPTQPVAGANLLQQHVDTGGLQSPPPRPSPALSAR-SSRRALARTAL 86
++ A L GR+P + V +GG PPPR R R +R +
Sbjct: 888 EETAQLTGPEAGRKPARGVG----------SGGQGPPPPRRESRTETRWGPRPGSSRRGI 937
Query: 87 PGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSR--RTARGWEPGP---TLGRPRGPARR 141
P GAP A P + P P + P P+ + T + +P P T G+ GP
Sbjct: 938 PPEEPGAPPRRAGPIKKPPPPTKVEELPPKPLEQGDETPKPPKPDPLKITKGKLGGPKET 997
Query: 142 PPLGGRVSP 150
PP G +SP
Sbjct: 998 PP-NGNLSP 1005
Score = 40.0 bits (92), Expect = 7e-04
Identities = 34/113 (30%), Positives = 44/113 (38%), Gaps = 22/113 (19%)
Query: 38 PGRRPTQPVAGANLLQQHVDTGGLQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCA 97
PG RP G++ + +Q+PPP+ P + P RG G+ G
Sbjct: 859 PGPRPLPWPPGSD------EVAKIQTPPPKKEPPKEETAQLTGPEAGRKPARGVGSGGQG 912
Query: 98 ALPSRLPS-------PRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPP 143
P R S PRP SRR PP EPG R GP ++PP
Sbjct: 913 PPPPRRESRTETRWGPRPGSSRRGIPPE--------EPGAP-PRRAGPIKKPP 956
Score = 31.6 bits (70), Expect = 0.26
Identities = 35/113 (30%), Positives = 47/113 (41%), Gaps = 10/113 (8%)
Query: 37 APGRRPTQPVAGANLLQQHVDTGGLQSPPPRPSPALSARSSRRALARTALPGRGRGAPGC 96
AP ++ P+ + L V+ G L PP P LS AL +L R AP
Sbjct: 1974 APAQQMLLPMVDSQL--PVVNFGSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPAT 2031
Query: 97 AALPSRLPSPRPRPS---RRAPPPVSRRTARGWEP-GPTLGRPRGPARRPPLG 145
LPS RP P+ R PV + + ++ LG P G +R PP G
Sbjct: 2032 RVLPS---PARPFPASLGRAELHPVELKPFQDYQKLSSNLGGP-GSSRTPPTG 2080
Score = 30.8 bits (68), Expect = 0.45
Identities = 40/149 (26%), Positives = 51/149 (34%), Gaps = 34/149 (22%)
Query: 22 MHQLAVQKAAHLLHVAPGRRPTQP---VAGANLLQQH--VDTGGLQSPPPRPSPALSARS 76
+H +K+ + P P P VAG + Q VD G P S+
Sbjct: 1614 LHTATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPD 1673
Query: 77 SRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPP-------------------P 117
A P R G+ A+P P P P RR PP P
Sbjct: 1674 GGLKGAAEGPPKRPGGSSPLNAVPCEGP-PGSEPPRRPPPAPHDGDRKELPREQPLPPGP 1732
Query: 118 V----SRRTARGWEPGPTLGRPRGPARRP 142
+ S+RT RG EPGP P+ RP
Sbjct: 1733 IGTERSQRTDRGTEPGPI-----RPSHRP 1756
Score = 28.9 bits (63), Expect = 1.7
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 10/66 (15%)
Query: 85 ALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPL 144
A P AP A P +P P P APPP S T P PA+ PP
Sbjct: 506 AEPAAPPAAPSTPAPPPAVPKELPAPP--APPPASAPTPE--------TEPEEPAQAPPA 555
Query: 145 GGRVSP 150
+P
Sbjct: 556 QSTPTP 561
Score = 28.9 bits (63), Expect = 1.7
Identities = 35/127 (27%), Positives = 45/127 (35%), Gaps = 30/127 (23%)
Query: 42 PTQPVAGANLLQQHVDTG--GLQS---PPPRPSPALSARSSRRALARTALPGRGRGAPGC 96
P +P + L+Q D G++S P P P P L++ P G P
Sbjct: 800 PAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPYLASYPG--------FPENGAPGPPI 851
Query: 97 AALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRP-------------RGPARRPP 143
+ P P PRP P PP S A+ P P P R PAR
Sbjct: 852 SRFPLEEPGPRPLPW----PPGSDEVAKIQTPPPKKEPPKEETAQLTGPEAGRKPARGVG 907
Query: 144 LGGRVSP 150
GG+ P
Sbjct: 908 SGGQGPP 914
Score = 28.5 bits (62), Expect = 2.2
Identities = 27/108 (25%), Positives = 36/108 (33%), Gaps = 31/108 (28%)
Query: 63 SPPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPS--------------------- 101
+PPP +P A A P + PG AA P+
Sbjct: 533 APPPASAPTPETEPEEPAQAP---PAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPV 589
Query: 102 --RLPSPR-PRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPLGG 146
+LPS P P PPP + + G + GP R+PP G
Sbjct: 590 EPQLPSKEGPEPPEEVPPPTTPPVPKVEPKGDGI----GPTRQPPSQG 633
Score = 28.1 bits (61), Expect = 2.9
Identities = 26/84 (30%), Positives = 28/84 (33%), Gaps = 21/84 (25%)
Query: 61 LQSPPPR--PSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPV 118
L PPP PSPA P R G P +PS R R R PP V
Sbjct: 1137 LAPPPPGAPPSPA---------------PARFTARGGRVFTPRGVPSRRGRGGGRPPPQV 1181
Query: 119 SRRTARGWEPGPTLGRPRGPARRP 142
GW P P+ P P
Sbjct: 1182 ----CPGWSPPAKSLAPKKPPTGP 1201
Score = 26.6 bits (57), Expect = 8.5
Identities = 29/103 (28%), Positives = 35/103 (33%), Gaps = 20/103 (19%)
Query: 65 PPRPSPA-LSARSSRRALARTALPGRGRGA--------PGCAALPSRL-----------P 104
PP P+PA +AR R R RGRG PG + L P
Sbjct: 1145 PPSPAPARFTARGGRVFTPRGVPSRRGRGGGRPPPQVCPGWSPPAKSLAPKKPPTGPLPP 1204
Query: 105 SPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPLGGR 147
S P + P P+S G G +G G R GR
Sbjct: 1205 SKEPLKEKLIPGPLSPVARGGSNGGSNVGMEDGERPRRRRHGR 1247
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 42.0 bits (97), Expect = 2e-04
Identities = 38/114 (33%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Query: 39 GRRPTQPVAGANLLQQHVDTGGLQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCAA 98
G P A A L G + PPP AL + A+ R L R G G A
Sbjct: 11 GAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGG-AT 69
Query: 99 LPSRLPSPRPRPSRRAPPPVSRR-----TARGWEPGP--TLGRPRGPARRPPLG 145
+P +PR P+R + PP S R A+ PGP + GR G R PLG
Sbjct: 70 IPE--SAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLG 121
Score = 34.3 bits (77), Expect = 0.041
Identities = 36/125 (28%), Positives = 45/125 (36%), Gaps = 26/125 (20%)
Query: 36 VAPGRRPTQPVAGANLLQQHVDTGGLQSPPPRPSPALSARSSRRAL----------ARTA 85
V P R+ P G + + L +P P P+ SA S + L A T+
Sbjct: 276 VTPPRKDAAPALGP------LSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTS 329
Query: 86 LPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPLG 145
L G+P A S LPSP P PP A P L P P PPL
Sbjct: 330 L-----GSPTLQATHSFLPSPPLSPLATPPPQAPPALAL-----PPLQAPPSPPASPPLS 379
Query: 146 GRVSP 150
+P
Sbjct: 380 PLATP 384
Score = 33.1 bits (74), Expect = 0.090
Identities = 33/111 (29%), Positives = 38/111 (34%), Gaps = 20/111 (18%)
Query: 36 VAPGRRPTQPVAGANLLQQHVDTGGLQSPPPRPSPALSARSSRRALARTALPGRGRGAPG 95
VA G+ P A DT G P PSPA++ RS R A
Sbjct: 133 VARGKATEAPKRSALSAGARRDTSG--PTPGTPSPAMARRS--------------RAAGT 176
Query: 96 CAALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPLGG 146
LP PS RPRP P R++ T RRP GG
Sbjct: 177 EVGLPRPAPSARPRPPTEGP----RKSVSSASEHSTTEPSPAARRRPSAGG 223
Score = 32.7 bits (73), Expect = 0.12
Identities = 34/111 (30%), Positives = 42/111 (37%), Gaps = 3/111 (2%)
Query: 37 APGRRPTQPVAGANLLQQHVDTGGLQSPPPRPSPALSARSSRRALARTALPGRGRGAPGC 96
A GR P A N V + G S RP P L + R + T G+ AP
Sbjct: 87 ASGRGERAPPA-KNTSPGPVSSPGRASGTTRPGP-LGQKGLRISAEETVARGKATEAPKR 144
Query: 97 AALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPAR-RPPLGG 146
+AL + P+ P P R +R L RP AR RPP G
Sbjct: 145 SALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEG 195
Score = 31.2 bits (69), Expect = 0.34
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 38 PGRRPTQPVA-----GANLLQQHVDTGGLQSP-PPRPSPALSARSSRRA---LARTALPG 88
P P P+A N L H+ LQ+P P PSP + A S A ++ +A P
Sbjct: 373 PASPPLSPLATPSPQAPNALAVHL----LQAPFSPPPSPPVQAPFSPPASPPVSPSATPP 428
Query: 89 RGRGAPGCAALPSRLP---------SPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPA 139
+ P AA P ++P SP P +APPP++ P L + P
Sbjct: 429 -SQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLA---------APPLQLAKPPP 478
Query: 140 RRPP 143
+ PP
Sbjct: 479 QAPP 482
Score = 29.6 bits (65), Expect = 1.00
Identities = 21/61 (34%), Positives = 25/61 (40%)
Query: 90 GRGAPGCAALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPLGGRVS 149
G A AA L +PRP S R PPPV+ R +GR R +GG
Sbjct: 11 GAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATI 70
Query: 150 P 150
P
Sbjct: 71 P 71
Score = 29.6 bits (65), Expect = 1.00
Identities = 31/121 (25%), Positives = 42/121 (34%), Gaps = 22/121 (18%)
Query: 38 PGRRPTQPVAGANLLQQHVDTGGLQSPPPRPSPALS------ARSSRRALARTALPGRGR 91
PG+ P P A+L + T Q+PP +P L A + +A R PG
Sbjct: 500 PGQAPFSP--SASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDT 557
Query: 92 GAPGCAALPSRLPSPRPRPSRRAPPPVS--------------RRTARGWEPGPTLGRPRG 137
G + P P P PSR +S RG++ GP G
Sbjct: 558 SVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAAS 617
Query: 138 P 138
P
Sbjct: 618 P 618
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 42.0 bits (97), Expect = 2e-04
Identities = 39/131 (29%), Positives = 50/131 (38%), Gaps = 29/131 (22%)
Query: 38 PGRRPTQPVAGANLLQQHVDTGGLQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCA 97
PG+ P G N Q G Q PPP+ + S RS PG+ +G P
Sbjct: 54 PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSP---------PGKPQGPPPQG 104
Query: 98 ALP--------SRLPSPRPRPSR-RAPPPVSRRTARGWEP----------GPTLGRPRGP 138
P S+ S R P + + PP +G P P G+P+GP
Sbjct: 105 GKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGP 164
Query: 139 ARRPPLGGRVS 149
RPP GGR S
Sbjct: 165 P-RPPQGGRPS 174
>gi|169210256 PREDICTED: hypothetical protein [Homo sapiens]
Length = 447
Score = 41.6 bits (96), Expect = 3e-04
Identities = 31/86 (36%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 64 PPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSRRTA 123
P P P P + R+S L G G GAPG A P R +PR PS R P RR
Sbjct: 270 PDPIPLPTRAPRTS------AGLAGVGSGAPGEPAEPGRARAPRSAPSSREPRQTKRRVG 323
Query: 124 RGWEPGPTLGRPRGPARRPPLGGRVS 149
G G GP G R S
Sbjct: 324 SRARAG--AGAVTGPCPAAAQGARGS 347
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 41.2 bits (95), Expect = 3e-04
Identities = 27/76 (35%), Positives = 31/76 (40%), Gaps = 9/76 (11%)
Query: 64 PPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPS--------PRPRPSRRA- 114
PPP P P++ A++ A LPG G AP LP LP P P P
Sbjct: 441 PPPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAPPLPPPLPGSCEFLPPPPPPLPGLGCP 500
Query: 115 PPPVSRRTARGWEPGP 130
PPP GW P P
Sbjct: 501 PPPPPLLPGMGWGPPP 516
Score = 28.9 bits (63), Expect = 1.7
Identities = 29/92 (31%), Positives = 31/92 (33%), Gaps = 37/92 (40%)
Query: 63 SPPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPS------RRAPP 116
+PPP P P L PG +A P P P P PS APP
Sbjct: 420 TPPPPPPPPL--------------------LPGSSAEPPPPPPPPPLPSVGAKALPTAPP 459
Query: 117 PVSRRTARGWEPGPTLG--RPRGPARRPPLGG 146
P P P LG P P PPL G
Sbjct: 460 P---------PPLPGLGAMAPPAPPLPPPLPG 482
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 41.2 bits (95), Expect = 3e-04
Identities = 27/76 (35%), Positives = 31/76 (40%), Gaps = 9/76 (11%)
Query: 64 PPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPS--------PRPRPSRRA- 114
PPP P P++ A++ A LPG G AP LP LP P P P
Sbjct: 441 PPPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAPPLPPPLPGSCEFLPPPPPPLPGLGCP 500
Query: 115 PPPVSRRTARGWEPGP 130
PPP GW P P
Sbjct: 501 PPPPPLLPGMGWGPPP 516
Score = 28.9 bits (63), Expect = 1.7
Identities = 29/92 (31%), Positives = 31/92 (33%), Gaps = 37/92 (40%)
Query: 63 SPPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPS------RRAPP 116
+PPP P P L PG +A P P P P PS APP
Sbjct: 420 TPPPPPPPPL--------------------LPGSSAEPPPPPPPPPLPSVGAKALPTAPP 459
Query: 117 PVSRRTARGWEPGPTLG--RPRGPARRPPLGG 146
P P P LG P P PPL G
Sbjct: 460 P---------PPLPGLGAMAPPAPPLPPPLPG 482
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 41.2 bits (95), Expect = 3e-04
Identities = 35/107 (32%), Positives = 43/107 (40%), Gaps = 20/107 (18%)
Query: 63 SPPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSRRT 122
SP PR ++ RR + + P R R +P A P R +P P P RR P P RR
Sbjct: 530 SPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRR 589
Query: 123 A-----------RGWEPGP-----TLGRPRGPARR----PPLGGRVS 149
+ R + P P T P P RR PP RVS
Sbjct: 590 SPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVS 636
Score = 36.6 bits (83), Expect = 0.008
Identities = 33/89 (37%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 67 RPSPALSARSSRRALARTALPGRGRGAPGCAALPSRL---PSPRPRPSRRAPP--PVSRR 121
R SP+ SA S R + P RGR + P+R PSP P P RR P P RR
Sbjct: 522 RHSPSRSASPSPRKRQKETSP-RGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRR 580
Query: 122 TARGWEPGPTLGRPRGPARRPPLGGRVSP 150
T P P P PP+ R SP
Sbjct: 581 TP---SPPPRRRSPSPRRYSPPIQRRYSP 606
Score = 36.2 bits (82), Expect = 0.011
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Query: 62 QSPPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRR--APPPVS 119
++PP R P R SR + R ++ SR SP +P +R +PP +
Sbjct: 326 RTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKT 385
Query: 120 RRTARGWEPGPTLGRPRGPARRPP 143
RR + P RP PA PP
Sbjct: 386 RRLSPSASPPRRRHRPSPPATPPP 409
Score = 35.4 bits (80), Expect = 0.018
Identities = 28/73 (38%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 70 PALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPS-RRAPPPVSRRTARGWEP 128
P +RS R+ R+ P R + SR SPR RPS RR P P R R P
Sbjct: 276 PRSRSRSKSRSRTRSRSPSHTRPRRRHRSR-SRSYSPRRRPSPRRRPSPRRRTPPRRMPP 334
Query: 129 GPTLGRPRGPARR 141
P R R P RR
Sbjct: 335 PPRHRRSRSPVRR 347
Score = 34.7 bits (78), Expect = 0.031
Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 14/117 (11%)
Query: 37 APGRRPTQPVAGANLLQQHVDTGGLQSPPPRPSPALSARSSRRALARTALPGRGRGAPGC 96
+P RP P ++ V G SP R SP+ S R RR ++RT P + + A
Sbjct: 683 SPSPRPRAPQTSSS--PPPVRRGASSSPQRRQSPSPSTRPIRR-VSRTPEPKKIKKAASP 739
Query: 97 A------ALPSRLPSPRPRPSRRAPP----PV-SRRTARGWEPGPTLGRPRGPARRP 142
+ SR S P P+ + PP PV S+ + W P + + + P P
Sbjct: 740 SPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSP 796
Score = 29.6 bits (65), Expect = 1.00
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 65 PPRPSPALSARSSRRALARTALPG-RGRGAPGCAALPSRLPSPRPRPSRRAPPPVSRR-- 121
P P RS R+ + P R R +P P R+P P PR R P RR
Sbjct: 293 PSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPP-PRHRRSRSPVRRRRRS 351
Query: 122 --TARGWEPGPTLGRPRGPARRPP 143
+ G + R R P ++PP
Sbjct: 352 SASLSGSSSSSSSSRSRSPPKKPP 375
Score = 29.3 bits (64), Expect = 1.3
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Query: 63 SPPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPS--PRPRPSRRAPPPVSR 120
SP PRP ++ S + + R +P + P R S P P+ ++A P +
Sbjct: 683 SPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQ 742
Query: 121 RTARGWEPGPTLGRPRGPARRPP 143
R G P A++PP
Sbjct: 743 SVRRVSSSRSVSGSPEPAAKKPP 765
Score = 28.9 bits (63), Expect = 1.7
Identities = 27/89 (30%), Positives = 33/89 (37%), Gaps = 16/89 (17%)
Query: 63 SPPPR---PSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPP-PV 118
SPPPR PSP + +R + + P R R SP P P RRA P P
Sbjct: 583 SPPPRRRSPSPRRYSPPIQRRYSPSPPPKR------------RTASPPPPPKRRASPSPP 630
Query: 119 SRRTARGWEPGPTLGRPRGPARRPPLGGR 147
+R P P R P L +
Sbjct: 631 PKRRVSHSPPPKQRSSPVTKRRSPSLSSK 659
Score = 28.9 bits (63), Expect = 1.7
Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 11/87 (12%)
Query: 63 SPPP--RPSPALSARSSRRALA--RTALPGRG-RGAPGCAALPSRLPSPRPRPSRRA--P 115
SPPP R SP RS + + + P R R A PSPRPR + + P
Sbjct: 638 SPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSP 697
Query: 116 PPVSRRTARGWEPGPTLGRPRGPARRP 142
PPV RG P + P+ RP
Sbjct: 698 PPV----RRGASSSPQRRQSPSPSTRP 720
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 40.8 bits (94), Expect = 4e-04
Identities = 35/96 (36%), Positives = 39/96 (40%), Gaps = 31/96 (32%)
Query: 60 GLQSPPPRPSPAL--------SARSSRR----ALARTALPGRGRGAPGCAALPSRLPSPR 107
G ++ PRPS L AR +RR A RT L GR PG A PS LP PR
Sbjct: 483 GGEAAAPRPSRVLLPELPAVDPARDTRREPDAAAQRTELGGRVGKGPG--APPSALPGPR 540
Query: 108 PRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPP 143
PRP +P G P GP PP
Sbjct: 541 PRPDSLSP-----------------GEPPGPPTPPP 559
>gi|89040432 PREDICTED: hypothetical protein [Homo sapiens]
Length = 212
Score = 40.8 bits (94), Expect = 4e-04
Identities = 34/95 (35%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 57 DTGGLQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPP 116
+ GG +S P SPA S+R+ R P GAPG +++P+ LPS P AP
Sbjct: 113 EPGGARSRPVAASPAASSRARSR-------PESSPGAPG-SSVPALLPS---LPPLAAPR 161
Query: 117 PVSRR-TARGWEPGPTLGRPRGPARRPPLGGRVSP 150
P+S R R +P P R PP GG P
Sbjct: 162 PLSARPRLRPPQPQPLALTVGNGPRAPPAGGSRQP 196
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 40.8 bits (94), Expect = 4e-04
Identities = 35/96 (36%), Positives = 39/96 (40%), Gaps = 31/96 (32%)
Query: 60 GLQSPPPRPSPAL--------SARSSRR----ALARTALPGRGRGAPGCAALPSRLPSPR 107
G ++ PRPS L AR +RR A RT L GR PG A PS LP PR
Sbjct: 483 GGEAAAPRPSRVLLPELPAVDPARDTRREPDAAAQRTELGGRVGKGPG--APPSALPGPR 540
Query: 108 PRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPP 143
PRP +P G P GP PP
Sbjct: 541 PRPDSLSP-----------------GEPPGPPTPPP 559
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 40.8 bits (94), Expect = 4e-04
Identities = 36/112 (32%), Positives = 46/112 (41%), Gaps = 15/112 (13%)
Query: 38 PGRRPTQPVAGANLLQQHVDTGGLQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCA 97
PG+ P G N Q G Q PPP+ +RSSR PG+ +G P
Sbjct: 260 PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGS--KSRSSRSP------PGKPQGPPPQG 311
Query: 98 ALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPLGGRVS 149
+ P P P + PPP +G P G+P+GP PP GG S
Sbjct: 312 GNQPQGPPP-PPGKPQGPPPQGGNKPQG---PPPPGKPQGP---PPQGGSKS 356
Score = 40.0 bits (92), Expect = 7e-04
Identities = 36/113 (31%), Positives = 47/113 (41%), Gaps = 17/113 (15%)
Query: 38 PGRRPTQPVAGANLLQQHVDTGGLQSPPPR-PSPALSARSSRRALARTALPGRGRGAPGC 96
PG+ P G N Q G Q PPP+ + + SARS PG+ +G P
Sbjct: 198 PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSP---------PGKPQGPPPQ 248
Query: 97 AALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPLGGRVS 149
+ P P P + PPP +G P G+P+GP PP GG S
Sbjct: 249 GGNQPQGPPP-PPGKPQGPPPQGGNKPQG---PPPPGKPQGP---PPQGGSKS 294
Score = 39.7 bits (91), Expect = 0.001
Identities = 34/112 (30%), Positives = 44/112 (39%), Gaps = 16/112 (14%)
Query: 38 PGRRPTQPVAGANLLQQHVDTGGLQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCA 97
PG+ P G N Q G Q PPP+ + S RS PG+ +G P
Sbjct: 75 PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSP---------PGKPQGPPPQG 125
Query: 98 ALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPLGGRVS 149
+ P P P + PPP +G P G+P+GP PP G S
Sbjct: 126 GNQPQGPPP-PPGKPQGPPPQGGNKPQG---PPPPGKPQGP---PPQGDNKS 170
Score = 38.1 bits (87), Expect = 0.003
Identities = 35/112 (31%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Query: 38 PGRRPTQPVAGANLLQQHVDTGGLQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCA 97
PG+ P G N Q G Q PPP+ +RSSR PG+ +G P
Sbjct: 136 PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDN--KSRSSRSP------PGKPQGPPPQG 187
Query: 98 ALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPLGGRVS 149
+ P P P + PPP +G P G+P+GP PP G S
Sbjct: 188 GNQPQGPPP-PPGKPQGPPPQGGNKPQG---PPPPGKPQGP---PPQGDNKS 232
Score = 37.4 bits (85), Expect = 0.005
Identities = 35/113 (30%), Positives = 44/113 (38%), Gaps = 23/113 (20%)
Query: 38 PGRRPTQPVAGANLLQQHVDTGGLQSPPPRP-SPALSARSSRRALARTALPGRGRGAPGC 96
PG+ P G N Q G Q PPP+ S + SARS PG+ +G
Sbjct: 322 PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSP---------PGKPQGP--- 369
Query: 97 AALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPLGGRVS 149
P + PPP + P G+P+GP RPP GGR S
Sbjct: 370 -------PQQEGNNPQGPPPPAGGNPQQ--PQAPPAGQPQGPP-RPPQGGRPS 412
Score = 32.7 bits (73), Expect = 0.12
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 86 LPGRGRGAPGCAA-LPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPL 144
+ G +GAP P PSP +P + PPP +G P P G+P+GP PP
Sbjct: 32 IAGNPQGAPPQGGNKPQGPPSPPGKP--QGPPPQGGNQPQG--PPPPPGKPQGP---PPQ 84
Query: 145 GG 146
GG
Sbjct: 85 GG 86
Score = 27.3 bits (59), Expect = 5.0
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
Query: 87 PGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPLGG 146
PG+ +G P + P P P + PPP +G P G+P+GP PP G
Sbjct: 54 PGKPQGPPPQGGNQPQGPPP-PPGKPQGPPPQGGNKPQG---PPPPGKPQGP---PPQGD 106
Query: 147 R 147
+
Sbjct: 107 K 107
>gi|190886435 RALBP1 associated Eps domain containing 1 isoform a
[Homo sapiens]
Length = 795
Score = 40.4 bits (93), Expect = 6e-04
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 48 GANLLQQHVDTGGLQS------PPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPS 101
G+N+ +Q +G PPPRP P+ S RSS + RT G+ G A P
Sbjct: 526 GSNVTRQRSHSGTSPDNTAPPPPPPRPQPSHS-RSSSLDMNRTFTVTTGQQQAGVVAHPP 584
Query: 102 RLPSPRPRPSRRAPPPVSR 120
+P PRP+PS+ P V R
Sbjct: 585 AVP-PRPQPSQAPGPAVHR 602
>gi|190886437 RALBP1 associated Eps domain containing 1 isoform b
[Homo sapiens]
Length = 769
Score = 40.4 bits (93), Expect = 6e-04
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 48 GANLLQQHVDTGGLQS------PPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPS 101
G+N+ +Q +G PPPRP P+ S RSS + RT G+ G A P
Sbjct: 500 GSNVTRQRSHSGTSPDNTAPPPPPPRPQPSHS-RSSSLDMNRTFTVTTGQQQAGVVAHPP 558
Query: 102 RLPSPRPRPSRRAPPPVSR 120
+P PRP+PS+ P V R
Sbjct: 559 AVP-PRPQPSQAPGPAVHR 576
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 40.4 bits (93), Expect = 6e-04
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 16/110 (14%)
Query: 38 PGRRPTQPVAGANLLQQHVDTGGLQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCA 97
PG+ P G N Q G Q PPP+ + S RS PG+ +G P
Sbjct: 115 PGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSP---------PGKPQGPPPQG 165
Query: 98 ALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPLGGR 147
+ P P P + PPP + +G P G+P+GP PP G +
Sbjct: 166 GNQPQGPPP-PPGKPQGPPPQGGKKPQG---PPPPGKPQGP---PPQGDK 208
Score = 39.7 bits (91), Expect = 0.001
Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 16/110 (14%)
Query: 38 PGRRPTQPVAGANLLQQHVDTGGLQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCA 97
PG+ P G N Q G Q PPP+ + S RS PG+ +G P
Sbjct: 54 PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSP---------PGKPQGPPPQG 104
Query: 98 ALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPLGGR 147
+ P P P + PP R + P G+P+GP PP G +
Sbjct: 105 GNQPQGPPPPPGKPQGPPPQGGNRP----QGPPPPGKPQGP---PPQGDK 147
Score = 35.8 bits (81), Expect = 0.014
Identities = 32/112 (28%), Positives = 44/112 (39%), Gaps = 16/112 (14%)
Query: 38 PGRRPTQPVAGANLLQQHVDTGGLQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCA 97
PG+ P G Q G Q PPP+ + S++S PG+ +G P
Sbjct: 176 PGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSP---------PGKPQGPPPQG 226
Query: 98 ALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPLGGRVS 149
+ P P P + PPP +G P G+P+GP P GG S
Sbjct: 227 GNQPQGPPP-PPGKPQGPPPQGGNKPQG---PPPPGKPQGP---PAQGGSKS 271
Score = 34.3 bits (77), Expect = 0.041
Identities = 34/113 (30%), Positives = 43/113 (38%), Gaps = 23/113 (20%)
Query: 38 PGRRPTQPVAGANLLQQHVDTGGLQSPPPRP-SPALSARSSRRALARTALPGRGRGAPGC 96
PG+ P G N Q G Q PP + S + SARS PG+ +G
Sbjct: 237 PGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSP---------PGKPQGP--- 284
Query: 97 AALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPLGGRVS 149
P + PPP + P G+P+GP RPP GGR S
Sbjct: 285 -------PQQEGNNPQGPPPPAGGNPQQ--PQAPPAGQPQGPP-RPPQGGRPS 327
>gi|153792042 G protein-coupled receptor 178 [Homo sapiens]
Length = 612
Score = 40.4 bits (93), Expect = 6e-04
Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 65 PPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPV------ 118
PP P+ A+S+ S R A +AL G P P+ P PR RP+R+ P P
Sbjct: 19 PPAPTRAVSSSSRARGGALSAL-GPSPARP-LTTSPAPAPPPRSRPARQQPDPQCWEKRG 76
Query: 119 -SRRTARGWEPGPTLGRPRG-----PARRPPL 144
+ +G GP GR RG PA PPL
Sbjct: 77 GAGGDTKGGAAGPGPGRLRGMDAEYPAFEPPL 108
>gi|169207782 PREDICTED: hypothetical protein [Homo sapiens]
Length = 330
Score = 40.0 bits (92), Expect = 7e-04
Identities = 40/120 (33%), Positives = 43/120 (35%), Gaps = 15/120 (12%)
Query: 39 GRRPTQPVAGANLLQQHVDTGGLQSP---PPRPSPALSARSSRRALARTALPGRGRGAPG 95
G PT P A L G LQ RP S R SR+ + PGR GA G
Sbjct: 98 GPHPTLPPGPAGSLVFPERRGSLQDRLGRASRPGCPPSPRGSRQERGANS-PGRS-GARG 155
Query: 96 CAALPSRLPSP-----RPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPLGGRVSP 150
C + P RPRP R P R P P P RRP LG SP
Sbjct: 156 CGGAAALQQEPTNFRGRPRPGARGTDPPGRTL-----PAPLARPSTQPGRRPGLGRAASP 210
>gi|169207076 PREDICTED: hypothetical protein [Homo sapiens]
Length = 330
Score = 40.0 bits (92), Expect = 7e-04
Identities = 40/120 (33%), Positives = 43/120 (35%), Gaps = 15/120 (12%)
Query: 39 GRRPTQPVAGANLLQQHVDTGGLQSP---PPRPSPALSARSSRRALARTALPGRGRGAPG 95
G PT P A L G LQ RP S R SR+ + PGR GA G
Sbjct: 98 GPHPTLPPGPAGSLVFPERRGSLQDRLGRASRPGCPPSPRGSRQERGANS-PGRS-GARG 155
Query: 96 CAALPSRLPSP-----RPRPSRRAPPPVSRRTARGWEPGPTLGRPRGPARRPPLGGRVSP 150
C + P RPRP R P R P P P RRP LG SP
Sbjct: 156 CGGAAALQQEPTNFRGRPRPGARGTDPPGRTL-----PAPLARPSTQPGRRPGLGRAASP 210
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 40.0 bits (92), Expect = 7e-04
Identities = 47/145 (32%), Positives = 51/145 (35%), Gaps = 22/145 (15%)
Query: 24 QLAVQKAAHLLHVAPGRRPTQPVAGANLLQQHVDTG---------------GLQSPPPRP 68
QLA AAH H+AP R P A A L HV +G G P P
Sbjct: 32 QLAAS-AAHHHHLAP-RTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEP 89
Query: 69 SPALSARSSRRALARTALPGRGRG-APGCAALPSRLPSPRPRPSRR--APPPVSRRTARG 125
PA AR R P R P A P+ P P S AP P + A G
Sbjct: 90 PPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAG 149
Query: 126 WEPGPTLGRPRGPARRPPLGGRVSP 150
EP P P PA L R P
Sbjct: 150 PEPAPA--GPAKPAGPAALAARAGP 172
Score = 39.7 bits (91), Expect = 0.001
Identities = 37/115 (32%), Positives = 43/115 (37%), Gaps = 11/115 (9%)
Query: 37 APGRRPTQPVAGANLLQQHVDTGGLQSP-PPRPSPALSARSSRRALARTALPGRGRGAPG 95
APG P P AG + GG Q P PP P L A+ P G A
Sbjct: 82 APGAAPEPPPAG----RARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEG-SAGS 136
Query: 96 CAALPSRLP---SPRPRPSRRAPP--PVSRRTARGWEPGPTLGRPRGPARRPPLG 145
CA +P+ P P P+ A P P + G PGP G GP P G
Sbjct: 137 CAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAG 191
Score = 35.8 bits (81), Expect = 0.014
Identities = 38/126 (30%), Positives = 47/126 (37%), Gaps = 22/126 (17%)
Query: 38 PGRRPTQPVAGANLLQQHVDTGGLQSPPPRPSPALSARSSRRA----LARTALPGR---- 89
PG P +P AG Q + L + +PA+S ++ A L + A PG
Sbjct: 182 PGPGPGKP-AGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQT 240
Query: 90 ----GRGAPGCAALPSRLPSPRPRPSRRAPPPVSRRTARGWEPGP-TLGRPRGPARRPPL 144
G AP A PS +P P APPP P P TL RP G PP
Sbjct: 241 PPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPP--------PPAPATLARPPGHPAGPPT 292
Query: 145 GGRVSP 150
P
Sbjct: 293 AAPAVP 298
Score = 32.0 bits (71), Expect = 0.20
Identities = 25/87 (28%), Positives = 32/87 (36%), Gaps = 14/87 (16%)
Query: 63 SPPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSRR- 121
SPP P+PA A A P AP A P P+ P + PPP + +
Sbjct: 256 SPPAAPAPAAPA----------AAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQN 305
Query: 122 ---TARGWEPGPTLGRPRGPARRPPLG 145
P P G P G + +P G
Sbjct: 306 GGSAGAAPAPAPAAGGPAGVSGQPGPG 332
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 39.7 bits (91), Expect = 0.001
Identities = 36/96 (37%), Positives = 38/96 (39%), Gaps = 19/96 (19%)
Query: 64 PPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRP------RPSRRAPPP 117
PPP P P S P RGRGAP PSR P+ P RPS PPP
Sbjct: 288 PPPPPPPHNSGPPPP--------PARGRGAP--PPPPSRAPTAAPPPPPPSRPSVAVPPP 337
Query: 118 VSRRTARGWEPGPTLGRPRGPARRPP--LG-GRVSP 150
R P P GP PP LG G V+P
Sbjct: 338 PPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAP 373
Score = 32.3 bits (72), Expect = 0.15
Identities = 31/91 (34%), Positives = 35/91 (38%), Gaps = 11/91 (12%)
Query: 60 GLQSPPPRPSPALSARS-----SRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRA 114
G +PPP PS A +A SR ++A P P ALPS PS P
Sbjct: 306 GRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPP------ 359
Query: 115 PPPVSRRTARGWEPGPTLGRPRGPARRPPLG 145
PPP S P P P P PP G
Sbjct: 360 PPPPSVLGVGPVAPPPPPPPPPPPGPPPPPG 390
Score = 31.6 bits (70), Expect = 0.26
Identities = 24/82 (29%), Positives = 26/82 (31%), Gaps = 18/82 (21%)
Query: 62 QSPPPRPSPALSARSSRRALARTALPGRGRGAPGCAALPSRLPSPRPRPSRRAPPPVSRR 121
Q+PPP P P RG P + P P P R APPP R
Sbjct: 275 QAPPPPP------------------PSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSR 316
Query: 122 TARGWEPGPTLGRPRGPARRPP 143
P P RP PP
Sbjct: 317 APTAAPPPPPPSRPSVAVPPPP 338
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,741,465
Number of Sequences: 37866
Number of extensions: 644940
Number of successful extensions: 8785
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 1241
Number of HSP's that attempted gapping in prelim test: 5446
Number of HSP's gapped (non-prelim): 3760
length of query: 150
length of database: 18,247,518
effective HSP length: 93
effective length of query: 57
effective length of database: 14,725,980
effective search space: 839380860
effective search space used: 839380860
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.