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Search of human proteins with 239751188
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751188 PREDICTED: hypothetical protein XP_002347742 [Homo
sapiens]
(319 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751188 PREDICTED: hypothetical protein XP_002347742 [Homo ... 651 0.0
gi|239756691 PREDICTED: hypothetical protein [Homo sapiens] 648 0.0
gi|239745676 PREDICTED: hypothetical protein XP_002343540 [Homo ... 648 0.0
gi|239752706 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|239747242 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|239741063 PREDICTED: hypothetical protein XP_002342081 [Homo ... 45 1e-04
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 37 0.018
gi|126090909 engrailed homeobox 1 [Homo sapiens] 37 0.023
gi|239757026 PREDICTED: hypothetical protein [Homo sapiens] 37 0.030
gi|239746055 PREDICTED: hypothetical protein [Homo sapiens] 37 0.030
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 36 0.052
gi|40806170 spastin isoform 2 [Homo sapiens] 35 0.068
gi|11875211 spastin isoform 1 [Homo sapiens] 35 0.068
gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens] 35 0.068
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 35 0.088
gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens] 35 0.12
gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens] 35 0.12
gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens] 35 0.12
gi|112789555 ADAM metallopeptidase with thrombospondin type 1 mo... 35 0.12
gi|153792074 proline rich 12 [Homo sapiens] 34 0.15
gi|239753665 PREDICTED: hypothetical protein [Homo sapiens] 33 0.26
gi|239748314 PREDICTED: hypothetical protein XP_002346609 [Homo ... 33 0.26
gi|239742212 PREDICTED: hypothetical protein XP_002342451 [Homo ... 33 0.26
gi|46559747 hypothetical protein LOC399947 [Homo sapiens] 33 0.34
gi|50345831 forkhead box J3 [Homo sapiens] 33 0.34
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 33 0.44
gi|156071474 solute carrier family 4, anion exchanger, member 2 ... 33 0.44
gi|239752252 PREDICTED: hypothetical protein XP_002348181 [Homo ... 33 0.44
gi|239741693 PREDICTED: hypothetical protein XP_002342282 [Homo ... 33 0.44
gi|41352061 metalloprotease 1 [Homo sapiens] 33 0.44
>gi|239751188 PREDICTED: hypothetical protein XP_002347742 [Homo
sapiens]
Length = 319
Score = 651 bits (1679), Expect = 0.0
Identities = 319/319 (100%), Positives = 319/319 (100%)
Query: 1 MPTQGKLKKSLLRACVHGPPSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQ 60
MPTQGKLKKSLLRACVHGPPSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQ
Sbjct: 1 MPTQGKLKKSLLRACVHGPPSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQ 60
Query: 61 LLLVPNFILAGLRETNPWRRESREAEPGSGKTNAAWGWRGKRSDGGQTHQPQGPRPPSEA 120
LLLVPNFILAGLRETNPWRRESREAEPGSGKTNAAWGWRGKRSDGGQTHQPQGPRPPSEA
Sbjct: 61 LLLVPNFILAGLRETNPWRRESREAEPGSGKTNAAWGWRGKRSDGGQTHQPQGPRPPSEA 120
Query: 121 LALEGSCAGRPPPPACSPTCAVVCGDGLCQLLHLGQAAGAATLLLTSRLLSWRILRLGLQ 180
LALEGSCAGRPPPPACSPTCAVVCGDGLCQLLHLGQAAGAATLLLTSRLLSWRILRLGLQ
Sbjct: 121 LALEGSCAGRPPPPACSPTCAVVCGDGLCQLLHLGQAAGAATLLLTSRLLSWRILRLGLQ 180
Query: 181 GGRTTIFQGGGGLQLAGVLLHQLQGGQLHKEEGRPSPVLHEGVHQLLAQAAELVPVGAGE 240
GGRTTIFQGGGGLQLAGVLLHQLQGGQLHKEEGRPSPVLHEGVHQLLAQAAELVPVGAGE
Sbjct: 181 GGRTTIFQGGGGLQLAGVLLHQLQGGQLHKEEGRPSPVLHEGVHQLLAQAAELVPVGAGE 240
Query: 241 AGAGAFLRQLLARHGQEVEVRGEGAQQVEDVVAPVVANDALALDRGAELHLLVTVVEHLV 300
AGAGAFLRQLLARHGQEVEVRGEGAQQVEDVVAPVVANDALALDRGAELHLLVTVVEHLV
Sbjct: 241 AGAGAFLRQLLARHGQEVEVRGEGAQQVEDVVAPVVANDALALDRGAELHLLVTVVEHLV 300
Query: 301 PQDLEGPTRALQQLQVPRV 319
PQDLEGPTRALQQLQVPRV
Sbjct: 301 PQDLEGPTRALQQLQVPRV 319
>gi|239756691 PREDICTED: hypothetical protein [Homo sapiens]
Length = 319
Score = 648 bits (1671), Expect = 0.0
Identities = 318/319 (99%), Positives = 318/319 (99%)
Query: 1 MPTQGKLKKSLLRACVHGPPSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQ 60
MPTQGKLKKSLLRACVHGPPSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQ
Sbjct: 1 MPTQGKLKKSLLRACVHGPPSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQ 60
Query: 61 LLLVPNFILAGLRETNPWRRESREAEPGSGKTNAAWGWRGKRSDGGQTHQPQGPRPPSEA 120
LLLVPNFILAGLRETNPWRRESREAEPGSGKTNAAW WRGKRSDGGQTHQPQGPRPPSEA
Sbjct: 61 LLLVPNFILAGLRETNPWRRESREAEPGSGKTNAAWRWRGKRSDGGQTHQPQGPRPPSEA 120
Query: 121 LALEGSCAGRPPPPACSPTCAVVCGDGLCQLLHLGQAAGAATLLLTSRLLSWRILRLGLQ 180
LALEGSCAGRPPPPACSPTCAVVCGDGLCQLLHLGQAAGAATLLLTSRLLSWRILRLGLQ
Sbjct: 121 LALEGSCAGRPPPPACSPTCAVVCGDGLCQLLHLGQAAGAATLLLTSRLLSWRILRLGLQ 180
Query: 181 GGRTTIFQGGGGLQLAGVLLHQLQGGQLHKEEGRPSPVLHEGVHQLLAQAAELVPVGAGE 240
GGRTTIFQGGGGLQLAGVLLHQLQGGQLHKEEGRPSPVLHEGVHQLLAQAAELVPVGAGE
Sbjct: 181 GGRTTIFQGGGGLQLAGVLLHQLQGGQLHKEEGRPSPVLHEGVHQLLAQAAELVPVGAGE 240
Query: 241 AGAGAFLRQLLARHGQEVEVRGEGAQQVEDVVAPVVANDALALDRGAELHLLVTVVEHLV 300
AGAGAFLRQLLARHGQEVEVRGEGAQQVEDVVAPVVANDALALDRGAELHLLVTVVEHLV
Sbjct: 241 AGAGAFLRQLLARHGQEVEVRGEGAQQVEDVVAPVVANDALALDRGAELHLLVTVVEHLV 300
Query: 301 PQDLEGPTRALQQLQVPRV 319
PQDLEGPTRALQQLQVPRV
Sbjct: 301 PQDLEGPTRALQQLQVPRV 319
>gi|239745676 PREDICTED: hypothetical protein XP_002343540 [Homo
sapiens]
Length = 319
Score = 648 bits (1671), Expect = 0.0
Identities = 318/319 (99%), Positives = 318/319 (99%)
Query: 1 MPTQGKLKKSLLRACVHGPPSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQ 60
MPTQGKLKKSLLRACVHGPPSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQ
Sbjct: 1 MPTQGKLKKSLLRACVHGPPSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQ 60
Query: 61 LLLVPNFILAGLRETNPWRRESREAEPGSGKTNAAWGWRGKRSDGGQTHQPQGPRPPSEA 120
LLLVPNFILAGLRETNPWRRESREAEPGSGKTNAAW WRGKRSDGGQTHQPQGPRPPSEA
Sbjct: 61 LLLVPNFILAGLRETNPWRRESREAEPGSGKTNAAWRWRGKRSDGGQTHQPQGPRPPSEA 120
Query: 121 LALEGSCAGRPPPPACSPTCAVVCGDGLCQLLHLGQAAGAATLLLTSRLLSWRILRLGLQ 180
LALEGSCAGRPPPPACSPTCAVVCGDGLCQLLHLGQAAGAATLLLTSRLLSWRILRLGLQ
Sbjct: 121 LALEGSCAGRPPPPACSPTCAVVCGDGLCQLLHLGQAAGAATLLLTSRLLSWRILRLGLQ 180
Query: 181 GGRTTIFQGGGGLQLAGVLLHQLQGGQLHKEEGRPSPVLHEGVHQLLAQAAELVPVGAGE 240
GGRTTIFQGGGGLQLAGVLLHQLQGGQLHKEEGRPSPVLHEGVHQLLAQAAELVPVGAGE
Sbjct: 181 GGRTTIFQGGGGLQLAGVLLHQLQGGQLHKEEGRPSPVLHEGVHQLLAQAAELVPVGAGE 240
Query: 241 AGAGAFLRQLLARHGQEVEVRGEGAQQVEDVVAPVVANDALALDRGAELHLLVTVVEHLV 300
AGAGAFLRQLLARHGQEVEVRGEGAQQVEDVVAPVVANDALALDRGAELHLLVTVVEHLV
Sbjct: 241 AGAGAFLRQLLARHGQEVEVRGEGAQQVEDVVAPVVANDALALDRGAELHLLVTVVEHLV 300
Query: 301 PQDLEGPTRALQQLQVPRV 319
PQDLEGPTRALQQLQVPRV
Sbjct: 301 PQDLEGPTRALQQLQVPRV 319
>gi|239752706 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 44.7 bits (104), Expect = 1e-04
Identities = 49/128 (38%), Positives = 61/128 (47%), Gaps = 21/128 (16%)
Query: 19 PPSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSR-VLQQLLL---VPNFILAGLRE 74
PP R R + PP +PHPAP+P A A Q GSR V ++ LL P+ A L
Sbjct: 28 PPPRGTARAR-PPLRPHPAPRPREMAA---AAPQNGSRSVAEKHLLNAVTPSPCPAPLAP 83
Query: 75 T--NPWRRESREAEPGSGKTNAAWGWRGKRSDGGQTH----QPQGPRPPSEALALEGSCA 128
T +P RR P G T + G R +R + H QP GP S L L+G+ A
Sbjct: 84 TSFSPPRRPGLPTPPRPGATGS--GARQQRGAFVRAHATFTQPHGPL--SGGLFLKGATA 139
Query: 129 GR---PPP 133
GR PPP
Sbjct: 140 GRNGAPPP 147
>gi|239747242 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 44.7 bits (104), Expect = 1e-04
Identities = 49/128 (38%), Positives = 61/128 (47%), Gaps = 21/128 (16%)
Query: 19 PPSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSR-VLQQLLL---VPNFILAGLRE 74
PP R R + PP +PHPAP+P A A Q GSR V ++ LL P+ A L
Sbjct: 28 PPPRGTARAR-PPLRPHPAPRPREMAA---AAPQNGSRSVAEKHLLNAVTPSPCPAPLAP 83
Query: 75 T--NPWRRESREAEPGSGKTNAAWGWRGKRSDGGQTH----QPQGPRPPSEALALEGSCA 128
T +P RR P G T + G R +R + H QP GP S L L+G+ A
Sbjct: 84 TSFSPPRRPGLPTPPRPGATGS--GARQQRGAFVRAHATFTQPHGPL--SGGLFLKGATA 139
Query: 129 GR---PPP 133
GR PPP
Sbjct: 140 GRNGAPPP 147
>gi|239741063 PREDICTED: hypothetical protein XP_002342081 [Homo
sapiens]
Length = 170
Score = 44.7 bits (104), Expect = 1e-04
Identities = 49/128 (38%), Positives = 61/128 (47%), Gaps = 21/128 (16%)
Query: 19 PPSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSR-VLQQLLL---VPNFILAGLRE 74
PP R R + PP +PHPAP+P A A Q GSR V ++ LL P+ A L
Sbjct: 28 PPPRGTARAR-PPLRPHPAPRPREMAA---AAPQNGSRSVAEKHLLNPVTPSPCPAPLAP 83
Query: 75 T--NPWRRESREAEPGSGKTNAAWGWRGKRSDGGQTH----QPQGPRPPSEALALEGSCA 128
T +P RR P G T + G R +R + H QP GP S L L+G+ A
Sbjct: 84 TSFSPPRRPGLPTPPRPGATGS--GARQQRGAFVRAHATFTQPHGPL--SGGLFLKGATA 139
Query: 129 GR---PPP 133
GR PPP
Sbjct: 140 GRNGAPPP 147
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 37.4 bits (85), Expect = 0.018
Identities = 49/194 (25%), Positives = 60/194 (30%), Gaps = 41/194 (21%)
Query: 30 PPHKPHPAPQPLPHQARDLAGEQEGSRVLQQLLLVPNFILAGLRETNPWRRESREAEPGS 89
PP KP P PQPLP A G F+ + WRR PG
Sbjct: 904 PPAKPPPPPQPLPSPAYPAPRPAPGP---------APFVPRERASVDRWRRTKGAGPPGG 954
Query: 90 -----------------------GKTNAA-WGWRGKRSDGGQTHQPQGPRPPSEALALE- 124
G+ AA G G+ PQ P P A+ +
Sbjct: 955 AGLADGFHRYYGPIEPQGLGLGLGEARAAPRGAAGRPLSPPAAQPPQKPPPSYFAIVRDK 1014
Query: 125 -------GSCAGRPPPPACSPTCAVVCGDGLCQLLHLGQAAGAATLLLTSRLLSWRILRL 177
G+ G P PPA A G LC+L ++ A S S +L
Sbjct: 1015 EPAEPPAGAFPGFPSPPAPPAAAATAVGPPLCRLAFEDESPPAPARWPRSDPESQPLLGP 1074
Query: 178 GLQGGRTTIFQGGG 191
G G T GGG
Sbjct: 1075 GAGGAGGTGGAGGG 1088
>gi|126090909 engrailed homeobox 1 [Homo sapiens]
Length = 392
Score = 37.0 bits (84), Expect = 0.023
Identities = 50/195 (25%), Positives = 70/195 (35%), Gaps = 22/195 (11%)
Query: 30 PPHKPHPAPQPLP---HQARDLAGEQEGSRVLQQLLLVPNFILAGLRETNPWRR--ESRE 84
PPH P P PQ L HQ + A + +L P+F G ++ P + +
Sbjct: 75 PPHPPPPPPQHLAAPAHQPQPAAQLHRTTNFFIDNILRPDF---GCKKEQPPPQLLVAAA 131
Query: 85 AEPGSGKTNAAWGWRGKRSDGGQTHQPQGPRPPSEALALEGSCAGRPPPPACSPTCAVVC 144
A G+G RG+ + G P G R P A L A PP P A
Sbjct: 132 ARGGAGGGGRVERDRGQTAAGRDPVHPLGTRAPGAASLLCAPDANCGPPDGSQPAAA--- 188
Query: 145 GDGLCQLLHLGQAAGAATLLLTSRLLSWRILRLGLQGGRTTIFQGGGGLQLAGVLLHQLQ 204
G G + + AA AA + + + GG + GGG G
Sbjct: 189 GAGASKAGNPAAAAAAAAAAVAAAAAAAAAKPSDTGGGGS-----GGGAGSPGA------ 237
Query: 205 GGQLHKEEGRPSPVL 219
G + E G P+ +L
Sbjct: 238 QGTKYPEHGNPAILL 252
>gi|239757026 PREDICTED: hypothetical protein [Homo sapiens]
Length = 141
Score = 36.6 bits (83), Expect = 0.030
Identities = 33/107 (30%), Positives = 42/107 (39%), Gaps = 10/107 (9%)
Query: 20 PSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQLLLVPNFILAGLRETNPWR 79
PSRR+ Q P PH L H EQE +LQ ++G T W
Sbjct: 31 PSRRRAHTQRTPCTPHTLAPLLTHTHTLSLAEQEPLTILQ---------VSG-PATARWA 80
Query: 80 RESREAEPGSGKTNAAWGWRGKRSDGGQTHQPQGPRPPSEALALEGS 126
+ SR PG + G R +RS +H G PP+ L L S
Sbjct: 81 QTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAACLRLPTS 127
>gi|239746055 PREDICTED: hypothetical protein [Homo sapiens]
Length = 141
Score = 36.6 bits (83), Expect = 0.030
Identities = 33/107 (30%), Positives = 42/107 (39%), Gaps = 10/107 (9%)
Query: 20 PSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQLLLVPNFILAGLRETNPWR 79
PSRR+ Q P PH L H EQE +LQ ++G T W
Sbjct: 31 PSRRRAHTQRTPCTPHTLAPLLTHTHTLSLAEQEPLTILQ---------VSG-PATARWA 80
Query: 80 RESREAEPGSGKTNAAWGWRGKRSDGGQTHQPQGPRPPSEALALEGS 126
+ SR PG + G R +RS +H G PP+ L L S
Sbjct: 81 QTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAACLRLPTS 127
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 35.8 bits (81), Expect = 0.052
Identities = 35/123 (28%), Positives = 44/123 (35%), Gaps = 14/123 (11%)
Query: 19 PPSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQLLLVPNFILAGLRETNPW 78
PP ++ Q PPH+P P PQP Q + V+ Q G+ P
Sbjct: 72 PPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQ----GPGPAPGVGSAPP- 126
Query: 79 RRESREAEPGSGKTNAAWGWRG----KRSDGGQTHQPQG---PRPPSEALALEGSCAGRP 131
S A P + T+ A G T P G P PPS + AG P
Sbjct: 127 --ASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGP 184
Query: 132 PPP 134
PPP
Sbjct: 185 PPP 187
>gi|40806170 spastin isoform 2 [Homo sapiens]
Length = 584
Score = 35.4 bits (80), Expect = 0.068
Identities = 17/38 (44%), Positives = 18/38 (47%)
Query: 97 GWRGKRSDGGQTHQPQGPRPPSEALALEGSCAGRPPPP 134
G RGK+ G P PRPP LA AG PPP
Sbjct: 5 GGRGKKKGSGGASNPVPPRPPPPCLAPAPPAAGPAPPP 42
>gi|11875211 spastin isoform 1 [Homo sapiens]
Length = 616
Score = 35.4 bits (80), Expect = 0.068
Identities = 17/38 (44%), Positives = 18/38 (47%)
Query: 97 GWRGKRSDGGQTHQPQGPRPPSEALALEGSCAGRPPPP 134
G RGK+ G P PRPP LA AG PPP
Sbjct: 5 GGRGKKKGSGGASNPVPPRPPPPCLAPAPPAAGPAPPP 42
>gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens]
Length = 948
Score = 35.4 bits (80), Expect = 0.068
Identities = 32/129 (24%), Positives = 49/129 (37%), Gaps = 11/129 (8%)
Query: 17 HGPPSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGS------RVLQ---QLLLVPNF 67
HGP R++ + P P P+ P H R L G + G VL+ QL N
Sbjct: 66 HGPSWRKKYSLVNRP--PGPSDPPADHAVRPLHGARGGQPPVPQQHVLERQVQLSQGQNV 123
Query: 68 ILAGLRETNPWRRESREAEPGSGKTNAAWGWRGKRSDGGQTHQPQGPRPPSEALALEGSC 127
++ + + A+ GS + W +R G+ P+G PS G+C
Sbjct: 124 VIKVKPPSKSGSASASGAQRGSLEEFEETPWSDQRPREGEGEPPRGQLQPSRPTRARGTC 183
Query: 128 AGRPPPPAC 136
+ P C
Sbjct: 184 SVEDPLLVC 192
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 35.0 bits (79), Expect = 0.088
Identities = 34/121 (28%), Positives = 45/121 (37%), Gaps = 15/121 (12%)
Query: 18 GPPSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQLLLVPNFILAGLRETNP 77
GPP R + PP + + P PH + +G Q P G E P
Sbjct: 154 GPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRP-----GKPEGPP 208
Query: 78 WR--RESREAEPGSGKTNAAWGWRGKRSDGGQTH--QPQGPRPPSEALALEGSCAGRPPP 133
+ +S+ P GK G + G H +PQGP P EG+ RPPP
Sbjct: 209 PQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQ------EGNKPQRPPP 262
Query: 134 P 134
P
Sbjct: 263 P 263
>gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 320
Score = 34.7 bits (78), Expect = 0.12
Identities = 45/174 (25%), Positives = 61/174 (35%), Gaps = 41/174 (23%)
Query: 2 PTQGKLKKSLLRACVHGPPSRRQMRDQ---------HPPHK-----PHPAPQP---LPHQ 44
PT + ++ LR H PP RQ + PP+ P AP P LP
Sbjct: 135 PTCPRRQRRWLRTTPHPPPPTRQGSREMAGAFLVAPRPPYSRSPGGPESAPTPASVLPEL 194
Query: 45 AR---DLA-----------GEQEGSRVLQQLLLVPNFILAGLRETNPWRR---ESREAEP 87
R DL GE G R+ L P + + R P + +R+ P
Sbjct: 195 RRGKQDLLSADSGLPAVDQGEVAGPRLQPAQPLRPGAVPSASRARAPDTKAGTRARDPAP 254
Query: 88 GSGKTNAAWGWRGKRSDGGQTHQPQGPRPP-------SEALALEGSCAGRPPPP 134
G+ + AA +T PRPP + + SCA PPPP
Sbjct: 255 GASQLRAAHSPHRGGGGAPRTQLAAPPRPPLPQENAAAGLASCSASCAAVPPPP 308
>gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 320
Score = 34.7 bits (78), Expect = 0.12
Identities = 45/174 (25%), Positives = 61/174 (35%), Gaps = 41/174 (23%)
Query: 2 PTQGKLKKSLLRACVHGPPSRRQMRDQ---------HPPHK-----PHPAPQP---LPHQ 44
PT + ++ LR H PP RQ + PP+ P AP P LP
Sbjct: 135 PTCPRRQRRWLRTTPHPPPPTRQGSREMAGAFLVAPRPPYSRSPGGPESAPTPASVLPEL 194
Query: 45 AR---DLA-----------GEQEGSRVLQQLLLVPNFILAGLRETNPWRR---ESREAEP 87
R DL GE G R+ L P + + R P + +R+ P
Sbjct: 195 RRGKQDLLSADSGLPAVDQGEVAGPRLQPAQPLRPGAVPSASRARAPDTKAGTRARDPAP 254
Query: 88 GSGKTNAAWGWRGKRSDGGQTHQPQGPRPP-------SEALALEGSCAGRPPPP 134
G+ + AA +T PRPP + + SCA PPPP
Sbjct: 255 GASQLRAAHSPHRGGGGAPRTQLAAPPRPPLPQENAAAGLASCSASCAAVPPPP 308
>gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 319
Score = 34.7 bits (78), Expect = 0.12
Identities = 45/174 (25%), Positives = 61/174 (35%), Gaps = 41/174 (23%)
Query: 2 PTQGKLKKSLLRACVHGPPSRRQMRDQ---------HPPHK-----PHPAPQP---LPHQ 44
PT + ++ LR H PP RQ + PP+ P AP P LP
Sbjct: 134 PTCPRRQRRWLRTTPHPPPPTRQGSREMAGAFLVAPRPPYSRSPGGPESAPTPASVLPEL 193
Query: 45 AR---DLA-----------GEQEGSRVLQQLLLVPNFILAGLRETNPWRR---ESREAEP 87
R DL GE G R+ L P + + R P + +R+ P
Sbjct: 194 RRGKQDLLSADSGLPAVDQGEVAGPRLQPAQPLRPGAVPSASRARAPDTKAGTRARDPAP 253
Query: 88 GSGKTNAAWGWRGKRSDGGQTHQPQGPRPP-------SEALALEGSCAGRPPPP 134
G+ + AA +T PRPP + + SCA PPPP
Sbjct: 254 GASQLRAAHSPHRGGGGAPRTQLAAPPRPPLPQENAAAGLASCSASCAAVPPPP 307
>gi|112789555 ADAM metallopeptidase with thrombospondin type 1
motif, 19 preproprotein [Homo sapiens]
Length = 1207
Score = 34.7 bits (78), Expect = 0.12
Identities = 35/131 (26%), Positives = 43/131 (32%), Gaps = 25/131 (19%)
Query: 30 PPHKPHPAPQPLPHQARDLAGEQEGSRVLQQLLLVPNFILAGLRETN----PWRRESREA 85
PP P P P P P Q E +G VL ++ + LR P +
Sbjct: 142 PPPPPQPPPSPPPAQ----HAEPDGDEVLLRIPAFSRDLYLLLRRDGRFLAPRFAVEQRP 197
Query: 86 EPGSGKTNAAWGWRGKRSDGGQTHQPQGPRPPSEALALEGSCAGRPPPPACSPTCAVVCG 145
PG G T AA PQ P PP G+ P A T CG
Sbjct: 198 NPGPGPTGAA-------------SAPQPPAPPDAGCFYTGAVLRHPGSLASFST----CG 240
Query: 146 DGLCQLLHLGQ 156
GL + L +
Sbjct: 241 GGLMGFIQLNE 251
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 34.3 bits (77), Expect = 0.15
Identities = 53/187 (28%), Positives = 68/187 (36%), Gaps = 33/187 (17%)
Query: 89 SGKTNAAWGWRGKRSDGGQTHQPQGPRP--------PSEALALEGSCAGRPPPPACSP-- 138
+GK + A G G+ GQ GP+ ++ L+ S +G PP P P
Sbjct: 429 TGKASGAGGAGGQAYSPGQPQGLLGPQAYGQGFGGGQAQDLSKAPSYSGGPPQPPSGPPP 488
Query: 139 ----TCAVVCGDGLCQLLH-------LGQAAGAATLLLTSRLLSWRI----LRLGLQGGR 183
TC D L L+ G AA + L S LS+ G GG
Sbjct: 489 PGLATCQSYSPDQLQGQLYGVQGEPYPGPAAHSQGLPTASPSLSYSTGHSPALSGHGGGW 548
Query: 184 TTIFQGGGGLQLAGVLLHQLQGGQLHKEEGRPSPVLHEG-----VHQLLAQAAELVPVGA 238
GGGG ++ LQ GRP V G + +LA A L P GA
Sbjct: 549 GPSSLGGGGEASPSHIIRPLQSPPA---TGRPPGVGSPGAPGKYLSSVLASAPFLAPPGA 605
Query: 239 GEAGAGA 245
G AGA
Sbjct: 606 GSYAAGA 612
>gi|239753665 PREDICTED: hypothetical protein [Homo sapiens]
Length = 233
Score = 33.5 bits (75), Expect = 0.26
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 188 QGGGGLQLAGVLLHQLQGGQLH---------KEEGRPSPVLHE-GVHQLLAQAAELVPVG 237
QG G LQ G L Q+Q G + G P P++H G H ++A P+G
Sbjct: 69 QGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAGIGVNPPLG 128
Query: 238 AGEAGAGAFLRQLLARHGQEVEVR 261
G A GA Q Q+++ R
Sbjct: 129 QGSADDGADPSQEGENEAQQLQPR 152
>gi|239748314 PREDICTED: hypothetical protein XP_002346609 [Homo
sapiens]
Length = 233
Score = 33.5 bits (75), Expect = 0.26
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 188 QGGGGLQLAGVLLHQLQGGQLH---------KEEGRPSPVLHE-GVHQLLAQAAELVPVG 237
QG G LQ G L Q+Q G + G P P++H G H ++A P+G
Sbjct: 69 QGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAGIGVNPPLG 128
Query: 238 AGEAGAGAFLRQLLARHGQEVEVR 261
G A GA Q Q+++ R
Sbjct: 129 QGSADDGADPSQEGENEAQQLQPR 152
>gi|239742212 PREDICTED: hypothetical protein XP_002342451 [Homo
sapiens]
Length = 233
Score = 33.5 bits (75), Expect = 0.26
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 188 QGGGGLQLAGVLLHQLQGGQLH---------KEEGRPSPVLHE-GVHQLLAQAAELVPVG 237
QG G LQ G L Q+Q G + G P P++H G H ++A P+G
Sbjct: 69 QGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAGIGVNPPLG 128
Query: 238 AGEAGAGAFLRQLLARHGQEVEVR 261
G A GA Q Q+++ R
Sbjct: 129 QGSADDGADPSQEGENEAQQLQPR 152
>gi|46559747 hypothetical protein LOC399947 [Homo sapiens]
Length = 197
Score = 33.1 bits (74), Expect = 0.34
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 118 SEALALEGSCAGRPPPPACSP-------TCAVVCGDGLCQLLHL 154
S L +G CA PPPPA SP +C G+GL Q + L
Sbjct: 153 SPGLPCQGPCAPPPPPPASSPQGAHAASSCLDTAGEGLLQTVVL 196
>gi|50345831 forkhead box J3 [Homo sapiens]
Length = 622
Score = 33.1 bits (74), Expect = 0.34
Identities = 13/25 (52%), Positives = 13/25 (52%)
Query: 19 PPSRRQMRDQHPPHKPHPAPQPLPH 43
PP R QHP PHPAP P H
Sbjct: 383 PPHRPHGLPQHPQRSPHPAPHPQQH 407
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 32.7 bits (73), Expect = 0.44
Identities = 36/129 (27%), Positives = 43/129 (33%), Gaps = 9/129 (6%)
Query: 19 PPSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQLLLVPNFILAGLRETNPW 78
PP Q PP P PAP P P G + L P G
Sbjct: 24 PPPPPAPPQQQPPPPPPPAPPPGP-------GPAPPQHPPRAEALPPEAADEGGPRGRLR 76
Query: 79 RRESREAEPGS-GKTNAAWGW-RGKRSDGGQTHQPQGPRPPSEALALEGSCAGRPPPPAC 136
R+S PG+ G + A G G+ G P GP P+ + SC G PA
Sbjct: 77 SRDSSCGRPGTPGAASTAKGSPNGECGRGEPQCSPAGPEGPARGPKVSFSCRGAASGPAP 136
Query: 137 SPTCAVVCG 145
P A G
Sbjct: 137 GPGPAEEAG 145
>gi|156071474 solute carrier family 4, anion exchanger, member 2
(erythrocyte membrane protein band 3-like 1) [Homo
sapiens]
Length = 1241
Score = 32.7 bits (73), Expect = 0.44
Identities = 36/137 (26%), Positives = 53/137 (38%), Gaps = 21/137 (15%)
Query: 19 PPSRRQMRDQHPPHKPHPAPQPLP----------HQARDLAGEQEGSRVLQQ--LLLVPN 66
P +RR+ Q P KP P P + D A E EG+R L Q + P+
Sbjct: 91 PDARRRKTPQGPGRKPRRRPGASPTGETPTIEEGEEDEDEASEAEGARALTQPSPVSTPS 150
Query: 67 FILAGLRETNPWRRESREAEPGSGKTNAAWGWRGKRSDGGQTHQPQGPRPPSEALAL--- 123
+ L+E + R++ P S + S G Q Q +EA+A+
Sbjct: 151 SVQFFLQEDDSADRKAERTSPSSPAPLPHQEATPRASKGAQA-GTQVEEAEAEAVAVASG 209
Query: 124 -----EGSCAGRPPPPA 135
+G +GRP P A
Sbjct: 210 TAGGDDGGASGRPLPKA 226
>gi|239752252 PREDICTED: hypothetical protein XP_002348181 [Homo
sapiens]
Length = 311
Score = 32.7 bits (73), Expect = 0.44
Identities = 56/214 (26%), Positives = 78/214 (36%), Gaps = 22/214 (10%)
Query: 68 ILAGLRETNPWRRESREAEPGSGKT--NAAWGWRGKRSDGGQTHQPQGPRPPSEALALEG 125
+ A R P + P +G+ A W + G + +G E L+
Sbjct: 57 VTASGRAAPPSSPHPGASPPAAGRPLRETAESWSPGQPGGDPSAGHRGHSRQQELRTLQE 116
Query: 126 SCAGRP---PPPACSPTCAVVCGDGLCQLLHLGQAAGAATLLLTS-RLLSWRILRL--GL 179
+C R P P C GL +L LG AA + L+ R + + G+
Sbjct: 117 ACRERRQGLPSPVTLSLCR-----GLSRLSRLGLLIAAARVPLSGLRAAPLHVTEVFEGV 171
Query: 180 QGGRTTIFQGGGGLQLAG--VLLHQLQGGQLHKEEGRPSPVLHEGVHQLLAQ-----AAE 232
+G + + G V LHQL + +E V G+HQ AQ AA
Sbjct: 172 RGRDGVVLDTPPQVLRTGRVVELHQLLAEVVQRESHHVQKVPVYGLHQHAAQGLDPVAAS 231
Query: 233 LVPVGAGEAGAGAFLRQLLARHGQEVEVRGEGAQ 266
VP AGE LR+L R VE R G Q
Sbjct: 232 FVPGWAGEEQLLGQLRELHLRF--LVEFRDPGVQ 263
>gi|239741693 PREDICTED: hypothetical protein XP_002342282 [Homo
sapiens]
Length = 480
Score = 32.7 bits (73), Expect = 0.44
Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 19/96 (19%)
Query: 31 PHKPHPAPQPLPHQARDLAGEQEGSRVLQQLLLVPNFILAGLRETNPWRRESREAEPGSG 90
P + H PLPH+ + G+ +++ L L+P PW R + A PG
Sbjct: 352 PEREHQDDHPLPHRVLGSSSHPTGAALVRVLRLLP----------WPWGRRAGRASPG-- 399
Query: 91 KTNAAWGWRGKRSDGGQTHQPQGPRPPSEALALEGS 126
W KR+ + +P P P + A GS
Sbjct: 400 ----LW---AKRAGSWELGRPAPPCPEASAPRPVGS 428
>gi|41352061 metalloprotease 1 [Homo sapiens]
Length = 1037
Score = 32.7 bits (73), Expect = 0.44
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 15/87 (17%)
Query: 1 MPTQGKLKKSLLRACVHGPPSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQ 60
MP K + LR+ RR P +PH +P+P + A GS+V+++
Sbjct: 789 MPQTEKAVEDFLRSIGRSKKERR-------PVRPHTVEKPVPSSSGGDAHVPHGSQVIRK 841
Query: 61 LLLVPNFILAGLRETNPWRRESREAEP 87
L++ P F PW+ ++ P
Sbjct: 842 LVMEPTF--------KPWQMKTHFLMP 860
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,733,656
Number of Sequences: 37866
Number of extensions: 916728
Number of successful extensions: 5642
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 150
Number of HSP's that attempted gapping in prelim test: 5360
Number of HSP's gapped (non-prelim): 392
length of query: 319
length of database: 18,247,518
effective HSP length: 102
effective length of query: 217
effective length of database: 14,385,186
effective search space: 3121585362
effective search space used: 3121585362
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.