PITRM1 27799

Name: PITRM1	Sequence: fasta or formatted (1037aa)		NCBI GI: 41352061
Description: metalloprotease 1		Referenced in: Metalloproteases
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 57 1 C cysteine 1.7 18 1 D aspartate 5.9 61 2 E glutamate 6.1 63 4 F phenylalanine 5.2 54 2 G glycine 6.0 62 3 H histidine 3.6 37 2 I isoleucine 4.1 42 2 K lysine 6.2 64 2 L leucine 10.3 107 2 M methionine 2.4 25 2 N asparagine 3.4 35 2 P proline 6.4 66 1 Q glutamine 5.5 57 2 R arginine 4.8 50 2 S serine 7.0 73 3 T threonine 6.6 68 2 V valine 5.4 56 2 W tryptophan 1.2 12 1 Y tyrosine 2.9 30 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 metalloprotease 1 IDE 0.006 insulin-degrading enzyme FAM13A 0.006 family with sequence similarity 13, member A1 isofor... FAM13A 0.006 family with sequence similarity 13, member A1 isofor... NRD1 0.005 nardilysin isoform b NRD1 0.005 nardilysin isoform a MUC16 0.005 mucin 16 SMC1A 0.005 structural maintenance of chromosomes 1A LOC100292419 0.004 PREDICTED: hypothetical protein LOC100290297 0.004 PREDICTED: hypothetical protein XP_002347742 LOC100288674 0.004 PREDICTED: hypothetical protein XP_002343540 BTLA 0.004 B and T lymphocyte associated isoform 1 TPR 0.003 nuclear pore complex-associated protein TPR ADPRHL1 0.003 ADP-ribosylhydrolase like 1 isoform 2 ADPRHL1 0.003 ADP-ribosylhydrolase like 1 isoform 1 C5orf42 0.003 hypothetical protein LOC65250 MAGEC1 0.003 melanoma antigen family C, 1 MED13 0.003 mediator complex subunit 13 MAP1A 0.003 microtubule-associated protein 1A MYH11 0.003 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.003 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.003 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.003 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... CCDC112 0.003 coiled-coil domain containing 112 isoform 1 CCDC112 0.003 coiled-coil domain containing 112 isoform 2 NACAD 0.003 NAC alpha domain containing NACAD 0.003 PREDICTED: NAC alpha domain containing NACAD 0.003 PREDICTED: NAC alpha domain containing NACAD 0.003 PREDICTED: NAC alpha domain containing NACAD 0.003 PREDICTED: NAC alpha domain containing Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.