LOC100288612 19122

Name: LOC100288612	Sequence: fasta or formatted (170aa)		NCBI GI: 239747242
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt prot {170aa} PREDICTED: hypothetical protein XP_002342081
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.8 20 4 C cysteine 0.6 1 1 D aspartate 0.6 1 1 E glutamate 3.5 6 2 F phenylalanine 2.4 4 1 G glycine 11.8 20 2 H histidine 2.4 4 1 I isoleucine 0.0 0 0 K lysine 1.8 3 1 L leucine 5.9 10 2 M methionine 1.2 2 1 N asparagine 1.8 3 1 P proline 20.0 34 3 Q glutamine 3.5 6 2 R arginine 11.8 20 2 S serine 8.2 14 1 T threonine 7.1 12 2 V valine 5.3 9 1 W tryptophan 0.6 1 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100292453 1.000 PREDICTED: hypothetical protein LOC100288612 0.994 PREDICTED: hypothetical protein XP_002342081 NACA 0.075 nascent polypeptide-associated complex alpha subuni... SYNPO 0.072 synaptopodin isoform A SAMD1 0.069 sterile alpha motif domain containing 1 TAF4 0.069 TBP-associated factor 4 SFPQ 0.066 splicing factor proline/glutamine rich (polypyrimidin... WIPF3 0.063 WAS/WASL interacting protein family, member 3 [Homo... SREBF1 0.063 sterol regulatory element binding transcription fact... SREBF1 0.063 sterol regulatory element binding transcription fact... PCLO 0.063 piccolo isoform 2 PCLO 0.063 piccolo isoform 1 CDKN1C 0.060 cyclin-dependent kinase inhibitor 1C isoform b [Hom... CDKN1C 0.060 cyclin-dependent kinase inhibitor 1C isoform b [Hom... CDKN1C 0.060 cyclin-dependent kinase inhibitor 1C isoform a INPPL1 0.060 inositol polyphosphate phosphatase-like 1 PDCD6IP 0.060 programmed cell death 6 interacting protein isoform... PDCD6IP 0.060 programmed cell death 6 interacting protein isoform ... FLJ22184 0.060 PREDICTED: hypothetical protein FLJ22184 PRB3 0.060 proline-rich protein BstNI subfamily 3 precursor [H... LOC100290297 0.060 PREDICTED: hypothetical protein XP_002347742 PRR12 0.057 proline rich 12 LOC643355 0.054 PREDICTED: hypothetical protein LOC643355 0.054 PREDICTED: hypothetical protein GGN 0.054 gametogenetin LOC100292419 0.054 PREDICTED: hypothetical protein LOC100288674 0.054 PREDICTED: hypothetical protein XP_002343540 SYN1 0.054 synapsin I isoform Ia SYN1 0.054 synapsin I isoform Ib Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.