LOC100288612 16710

Name: LOC100288612	Sequence: fasta or formatted (170aa)		NCBI GI: 239741063
Description: PREDICTED: hypothetical protein XP_002342081		Not currently referenced in the text
Other entries for this name: alt prot {170aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.2 19 4 C cysteine 0.6 1 1 D aspartate 0.6 1 1 E glutamate 3.5 6 2 F phenylalanine 2.4 4 1 G glycine 11.8 20 2 H histidine 2.4 4 1 I isoleucine 0.0 0 0 K lysine 1.8 3 1 L leucine 5.9 10 2 M methionine 1.2 2 1 N asparagine 1.8 3 1 P proline 20.6 35 3 Q glutamine 3.5 6 2 R arginine 11.8 20 2 S serine 8.2 14 1 T threonine 7.1 12 2 V valine 5.3 9 1 W tryptophan 0.6 1 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342081 LOC100292453 0.991 PREDICTED: hypothetical protein LOC100288612 0.991 PREDICTED: hypothetical protein NACA 0.087 nascent polypeptide-associated complex alpha subuni... PRB3 0.078 proline-rich protein BstNI subfamily 3 precursor [H... SAMD1 0.072 sterile alpha motif domain containing 1 SYNPO 0.072 synaptopodin isoform A INPPL1 0.072 inositol polyphosphate phosphatase-like 1 PCLO 0.072 piccolo isoform 2 PCLO 0.072 piccolo isoform 1 TAF4 0.069 TBP-associated factor 4 WIPF3 0.063 WAS/WASL interacting protein family, member 3 [Homo... SFPQ 0.063 splicing factor proline/glutamine rich (polypyrimidin... GGN 0.063 gametogenetin SREBF1 0.060 sterol regulatory element binding transcription fact... SREBF1 0.060 sterol regulatory element binding transcription fact... FLJ22184 0.060 PREDICTED: hypothetical protein FLJ22184 PPP1R13L 0.060 protein phosphatase 1, regulatory subunit 13 like [... PPP1R13L 0.060 protein phosphatase 1, regulatory subunit 13 like [H... PRG4 0.060 proteoglycan 4 isoform D PRG4 0.060 proteoglycan 4 isoform C PRG4 0.060 proteoglycan 4 isoform B PRG4 0.060 proteoglycan 4 isoform A LOC100290297 0.060 PREDICTED: hypothetical protein XP_002347742 CDKN1C 0.057 cyclin-dependent kinase inhibitor 1C isoform b [Hom... CDKN1C 0.057 cyclin-dependent kinase inhibitor 1C isoform b [Hom... CDKN1C 0.057 cyclin-dependent kinase inhibitor 1C isoform a CASKIN2 0.057 cask-interacting protein 2 isoform b CASKIN2 0.057 cask-interacting protein 2 isoform a PRB2 0.057 proline-rich protein BstNI subfamily 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.