Guide to the Human Genome
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Search of human proteins with 239750588

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239750588 PREDICTED: hypothetical protein XP_002347440 [Homo
sapiens]
         (510 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239750588 PREDICTED: hypothetical protein XP_002347440 [Homo ...  1066   0.0  
gi|239744885 PREDICTED: hypothetical protein XP_002344275 [Homo ...  1066   0.0  
gi|239756061 PREDICTED: hypothetical protein [Homo sapiens]           399   e-111
gi|20143482 melanoma antigen family E, 1 [Homo sapiens]                35   0.21 
gi|4503657 forkhead box H1 [Homo sapiens]                              33   0.62 
gi|239753314 PREDICTED: similar to RIKEN cDNA C230030N03 [Homo s...    33   0.62 
gi|4505777 PHD finger protein 1 isoform a [Homo sapiens]               33   0.80 
gi|168823443 RAD54-like 2 [Homo sapiens]                               31   3.1  
gi|197100900 iroquois homeobox 2 [Homo sapiens]                        31   3.1  
gi|39930475 iroquois homeobox 2 [Homo sapiens]                         31   3.1  
gi|239757043 PREDICTED: functional smad suppressing element 18 [...    30   4.0  
gi|239751555 PREDICTED: functional smad suppressing element 18 [...    30   4.0  
gi|239746067 PREDICTED: functional smad suppressing element 18 [...    30   4.0  
gi|59806357 submaxillary gland androgen regulated protein 3 homo...    30   4.0  
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]                    30   4.0  
gi|47059492 hypothetical protein LOC80111 [Homo sapiens]               30   4.0  
gi|239752777 PREDICTED: hypothetical protein [Homo sapiens]            30   5.2  
gi|239749872 PREDICTED: hypothetical protein [Homo sapiens]            30   5.2  
gi|239747289 PREDICTED: hypothetical protein XP_002346412 [Homo ...    30   5.2  
gi|239744174 PREDICTED: hypothetical protein XP_002343068 [Homo ...    30   5.2  
gi|239741113 PREDICTED: hypothetical protein XP_002342112 [Homo ...    30   5.2  
gi|188536047 SWI/SNF-related matrix-associated actin-dependent r...    30   5.2  
gi|115430223 galectin 3 [Homo sapiens]                                 30   5.2  
gi|77681565 NG5 protein [Homo sapiens]                                 30   5.2  
gi|225703079 membrane bound O-acyltransferase domain containing ...    29   8.9  
gi|225703037 membrane bound O-acyltransferase domain containing ...    29   8.9  
gi|239758167 PREDICTED: hypothetical protein XP_002346321 [Homo ...    29   8.9  
gi|169164558 PREDICTED: hypothetical protein [Homo sapiens]            29   8.9  
gi|239750077 PREDICTED: hypothetical protein [Homo sapiens]            29   8.9  
gi|239748011 PREDICTED: hypothetical protein [Homo sapiens]            29   8.9  

>gi|239750588 PREDICTED: hypothetical protein XP_002347440 [Homo
           sapiens]
          Length = 510

 Score = 1066 bits (2757), Expect = 0.0
 Identities = 510/510 (100%), Positives = 510/510 (100%)

Query: 1   MALGLGQAPGFHGPVDPLEEGGDLGVDPVLPLTGTALSPADDACHEVGVLEAGDVRAPAV 60
           MALGLGQAPGFHGPVDPLEEGGDLGVDPVLPLTGTALSPADDACHEVGVLEAGDVRAPAV
Sbjct: 1   MALGLGQAPGFHGPVDPLEEGGDLGVDPVLPLTGTALSPADDACHEVGVLEAGDVRAPAV 60

Query: 61  PLAGILLLGVVAGTEHVLGDDEAAGQLAAVAVHVGHLQHLEPGGLPALLVGAPEAAHNPR 120
           PLAGILLLGVVAGTEHVLGDDEAAGQLAAVAVHVGHLQHLEPGGLPALLVGAPEAAHNPR
Sbjct: 61  PLAGILLLGVVAGTEHVLGDDEAAGQLAAVAVHVGHLQHLEPGGLPALLVGAPEAAHNPR 120

Query: 121 LLRHQRGLGPVTLGEAGRRHVHAEGDGGLEPEHGDVEVIGLLCEPVVLDDHLHLVHRLTA 180
           LLRHQRGLGPVTLGEAGRRHVHAEGDGGLEPEHGDVEVIGLLCEPVVLDDHLHLVHRLTA
Sbjct: 121 LLRHQRGLGPVTLGEAGRRHVHAEGDGGLEPEHGDVEVIGLLCEPVVLDDHLHLVHRLTA 180

Query: 181 LLLLRVPVPWDRRTAATPVSFGGCIVCASRGHQRGVPGPKAFGIPDPGCAVWPLAESDFY 240
           LLLLRVPVPWDRRTAATPVSFGGCIVCASRGHQRGVPGPKAFGIPDPGCAVWPLAESDFY
Sbjct: 181 LLLLRVPVPWDRRTAATPVSFGGCIVCASRGHQRGVPGPKAFGIPDPGCAVWPLAESDFY 240

Query: 241 LGPGDASLCRNIICLNRCACLVSRRFSSDSIVLGMPRAAMEMPSCVWLKSSRSKGFSVGS 300
           LGPGDASLCRNIICLNRCACLVSRRFSSDSIVLGMPRAAMEMPSCVWLKSSRSKGFSVGS
Sbjct: 241 LGPGDASLCRNIICLNRCACLVSRRFSSDSIVLGMPRAAMEMPSCVWLKSSRSKGFSVGS 300

Query: 301 RSAASYGFHVMLSGASPLLLVAWATDLFLRSRVCFPQGPAQNMPVSPPPGTGLSSLARPS 360
           RSAASYGFHVMLSGASPLLLVAWATDLFLRSRVCFPQGPAQNMPVSPPPGTGLSSLARPS
Sbjct: 301 RSAASYGFHVMLSGASPLLLVAWATDLFLRSRVCFPQGPAQNMPVSPPPGTGLSSLARPS 360

Query: 361 GSGWLWPNVPPTCGNAGLAVVSQGVPAGAGAHHRVLFLVAELVTVPVVQAAELPCDCKGE 420
           GSGWLWPNVPPTCGNAGLAVVSQGVPAGAGAHHRVLFLVAELVTVPVVQAAELPCDCKGE
Sbjct: 361 GSGWLWPNVPPTCGNAGLAVVSQGVPAGAGAHHRVLFLVAELVTVPVVQAAELPCDCKGE 420

Query: 421 ARWLWGQLEKWRLGWPKGASYIHLPVSHKAAIGLSKGPEPGDSCGRKPIFQGCMEAFIYE 480
           ARWLWGQLEKWRLGWPKGASYIHLPVSHKAAIGLSKGPEPGDSCGRKPIFQGCMEAFIYE
Sbjct: 421 ARWLWGQLEKWRLGWPKGASYIHLPVSHKAAIGLSKGPEPGDSCGRKPIFQGCMEAFIYE 480

Query: 481 CGLIIFAGLVLFVNSCCCCCMETFSYLHDK 510
           CGLIIFAGLVLFVNSCCCCCMETFSYLHDK
Sbjct: 481 CGLIIFAGLVLFVNSCCCCCMETFSYLHDK 510


>gi|239744885 PREDICTED: hypothetical protein XP_002344275 [Homo
           sapiens]
          Length = 510

 Score = 1066 bits (2757), Expect = 0.0
 Identities = 510/510 (100%), Positives = 510/510 (100%)

Query: 1   MALGLGQAPGFHGPVDPLEEGGDLGVDPVLPLTGTALSPADDACHEVGVLEAGDVRAPAV 60
           MALGLGQAPGFHGPVDPLEEGGDLGVDPVLPLTGTALSPADDACHEVGVLEAGDVRAPAV
Sbjct: 1   MALGLGQAPGFHGPVDPLEEGGDLGVDPVLPLTGTALSPADDACHEVGVLEAGDVRAPAV 60

Query: 61  PLAGILLLGVVAGTEHVLGDDEAAGQLAAVAVHVGHLQHLEPGGLPALLVGAPEAAHNPR 120
           PLAGILLLGVVAGTEHVLGDDEAAGQLAAVAVHVGHLQHLEPGGLPALLVGAPEAAHNPR
Sbjct: 61  PLAGILLLGVVAGTEHVLGDDEAAGQLAAVAVHVGHLQHLEPGGLPALLVGAPEAAHNPR 120

Query: 121 LLRHQRGLGPVTLGEAGRRHVHAEGDGGLEPEHGDVEVIGLLCEPVVLDDHLHLVHRLTA 180
           LLRHQRGLGPVTLGEAGRRHVHAEGDGGLEPEHGDVEVIGLLCEPVVLDDHLHLVHRLTA
Sbjct: 121 LLRHQRGLGPVTLGEAGRRHVHAEGDGGLEPEHGDVEVIGLLCEPVVLDDHLHLVHRLTA 180

Query: 181 LLLLRVPVPWDRRTAATPVSFGGCIVCASRGHQRGVPGPKAFGIPDPGCAVWPLAESDFY 240
           LLLLRVPVPWDRRTAATPVSFGGCIVCASRGHQRGVPGPKAFGIPDPGCAVWPLAESDFY
Sbjct: 181 LLLLRVPVPWDRRTAATPVSFGGCIVCASRGHQRGVPGPKAFGIPDPGCAVWPLAESDFY 240

Query: 241 LGPGDASLCRNIICLNRCACLVSRRFSSDSIVLGMPRAAMEMPSCVWLKSSRSKGFSVGS 300
           LGPGDASLCRNIICLNRCACLVSRRFSSDSIVLGMPRAAMEMPSCVWLKSSRSKGFSVGS
Sbjct: 241 LGPGDASLCRNIICLNRCACLVSRRFSSDSIVLGMPRAAMEMPSCVWLKSSRSKGFSVGS 300

Query: 301 RSAASYGFHVMLSGASPLLLVAWATDLFLRSRVCFPQGPAQNMPVSPPPGTGLSSLARPS 360
           RSAASYGFHVMLSGASPLLLVAWATDLFLRSRVCFPQGPAQNMPVSPPPGTGLSSLARPS
Sbjct: 301 RSAASYGFHVMLSGASPLLLVAWATDLFLRSRVCFPQGPAQNMPVSPPPGTGLSSLARPS 360

Query: 361 GSGWLWPNVPPTCGNAGLAVVSQGVPAGAGAHHRVLFLVAELVTVPVVQAAELPCDCKGE 420
           GSGWLWPNVPPTCGNAGLAVVSQGVPAGAGAHHRVLFLVAELVTVPVVQAAELPCDCKGE
Sbjct: 361 GSGWLWPNVPPTCGNAGLAVVSQGVPAGAGAHHRVLFLVAELVTVPVVQAAELPCDCKGE 420

Query: 421 ARWLWGQLEKWRLGWPKGASYIHLPVSHKAAIGLSKGPEPGDSCGRKPIFQGCMEAFIYE 480
           ARWLWGQLEKWRLGWPKGASYIHLPVSHKAAIGLSKGPEPGDSCGRKPIFQGCMEAFIYE
Sbjct: 421 ARWLWGQLEKWRLGWPKGASYIHLPVSHKAAIGLSKGPEPGDSCGRKPIFQGCMEAFIYE 480

Query: 481 CGLIIFAGLVLFVNSCCCCCMETFSYLHDK 510
           CGLIIFAGLVLFVNSCCCCCMETFSYLHDK
Sbjct: 481 CGLIIFAGLVLFVNSCCCCCMETFSYLHDK 510


>gi|239756061 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 332

 Score =  399 bits (1024), Expect = e-111
 Identities = 202/225 (89%), Positives = 205/225 (91%), Gaps = 2/225 (0%)

Query: 1   MALGLGQAPGFHGPVDPLEEGGDLGVDPVLPLTGTALSPADDACHEVGVLEAGDVRAPAV 60
           MALGLGQAPGFHGPVDPLEEGGDLGVDPVLPLTGTALSPADDACHEVGVLEAGDVRAPAV
Sbjct: 1   MALGLGQAPGFHGPVDPLEEGGDLGVDPVLPLTGTALSPADDACHEVGVLEAGDVRAPAV 60

Query: 61  PLAGILLLGVVAGTEHVLGDDEAAGQLAAVAVHVGHLQHLEPGGLPALLVGAPEAAHNPR 120
           PLAGILLLGVVAGTEHVLGDDEAAGQLAAVAVHVGHLQHLEPGGLPALLVGAPEAAHNPR
Sbjct: 61  PLAGILLLGVVAGTEHVLGDDEAAGQLAAVAVHVGHLQHLEPGGLPALLVGAPEAAHNPR 120

Query: 121 LLRHQRGLGPVTLGEAGRRHVHAEGDGGLEPEHGDVEVIGLLCEPVVLDDHLHLVHRLTA 180
           LLRHQRGLGPVTLGEAGRRHVHAEGDGGLEPEHGDVEVIGLLCEPVVLDDHLHLVHRLTA
Sbjct: 121 LLRHQRGLGPVTLGEAGRRHVHAEGDGGLEPEHGDVEVIGLLCEPVVLDDHLHLVHRLTA 180

Query: 181 LLLLRVPVPWDRRTAATPVSFGGCIVCASR--GHQRGVPGPKAFG 223
           LLLLRVPVPWDRR+      F    V  SR  GH +    P+ FG
Sbjct: 181 LLLLRVPVPWDRRSPVLQAPFLMPGVRKSRPLGHFQVRSKPRLFG 225


>gi|20143482 melanoma antigen family E, 1 [Homo sapiens]
          Length = 957

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 19/54 (35%), Positives = 25/54 (46%)

Query: 338 GPAQNMPVSPPPGTGLSSLARPSGSGWLWPNVPPTCGNAGLAVVSQGVPAGAGA 391
           G   +  V P PG GLS+   P+ S     +VPPT G     +V    P G G+
Sbjct: 349 GEGPSTSVLPIPGEGLSTSVPPTASDGSDTSVPPTPGEGASTLVQPTAPDGPGS 402



 Score = 30.0 bits (66), Expect = 5.2
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 338 GPAQNMPVSPPPGTGLSSLARPSGSGWLWPNVPPTCG 374
           G   +  V P PG GLS+   P+ +  L  +VPPT G
Sbjct: 313 GEGSSTSVPPTPGGGLSTSVPPTATEELSTSVPPTPG 349


>gi|4503657 forkhead box H1 [Homo sapiens]
          Length = 365

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 30/87 (34%), Positives = 34/87 (39%), Gaps = 23/87 (26%)

Query: 344 PVSPPP----GTGLSSLARPSGSGWLWPNVPPTCGNAGLAVVSQGVPAGAGAHHRVLFLV 399
           P SPPP    G  + SL   SG G  WP         GLA  S  VPAG G         
Sbjct: 156 PPSPPPPPSEGFSIKSLLGGSGEGAPWP---------GLAPQSSPVPAGTGNSGE----- 201

Query: 400 AELVTVPVVQAAELP----CDCKGEAR 422
            E V  P + ++E P    C   G  R
Sbjct: 202 -EAVPTPPLPSSERPLWPLCPLPGPTR 227


>gi|239753314 PREDICTED: similar to RIKEN cDNA C230030N03 [Homo
           sapiens]
          Length = 1183

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 4/76 (5%)

Query: 313 SGASPLLLVAWATDLFLRSRVCFPQGPAQNMP-VSPPPGTGLSSLARPSGSGWLWPNVPP 371
           +G   L  VA A +L    RV  PQ  ++  P    PPG  L   +R SGSG   P   P
Sbjct: 629 AGDGALQRVAQAAEL---GRVLVPQAASEETPSTEEPPGERLRGESRSSGSGERGPEEAP 685

Query: 372 TCGNAGLAVVSQGVPA 387
             G A        VPA
Sbjct: 686 EGGAAAARGQRPRVPA 701


>gi|4505777 PHD finger protein 1 isoform a [Homo sapiens]
          Length = 457

 Score = 32.7 bits (73), Expect = 0.80
 Identities = 18/48 (37%), Positives = 21/48 (43%)

Query: 344 PVSPPPGTGLSSLARPSGSGWLWPNVPPTCGNAGLAVVSQGVPAGAGA 391
           PV PP G G  + A P G G   P   P  G       ++G   GAGA
Sbjct: 338 PVEPPTGDGALTRAGPWGRGLTSPGEAPEAGARAPEEEAEGESGGAGA 385


>gi|168823443 RAD54-like 2 [Homo sapiens]
          Length = 1467

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 43/170 (25%), Positives = 59/170 (34%), Gaps = 28/170 (16%)

Query: 331  SRVCFPQGPAQNMPVSPPPGTGLSSLARPSGSGWLWPNVPPTCGNAGLAVVSQGVPAGAG 390
            +    P  PAQ M  S  PGT L +  R  G           C N+ L V  Q      G
Sbjct: 1198 TNAALPGPPAQLMDSSAVPGTALGTEPRLGGH----------CLNSSLLVTGQ----PCG 1243

Query: 391  AHHRVLFL---VAELVTVPVVQAAELPCDCKGEARWLWGQLEKWRLGWPKGASYIHLPVS 447
              H VL L     +L T P  Q +      KG    L   ++ +  G+P    +   PVS
Sbjct: 1244 DRHPVLDLRGHKRKLATPPAAQESSRRRSRKGH---LPAPVQPYEHGYPVSGGFAMPPVS 1300

Query: 448  --HKAAIGLSKGPEPGDSCGRKPIFQGCMEAFIYECGLIIFAGLVLFVNS 495
              H      +         G   +F G   ++     L+  A LV  V +
Sbjct: 1301 LNHNLTTPFT------SQAGENSLFMGSTPSYYQLSNLLADARLVFPVTT 1344


>gi|197100900 iroquois homeobox 2 [Homo sapiens]
          Length = 471

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 7/63 (11%)

Query: 336 PQGPAQNMPVSPPPGTG--LSSLARPSGSGWLWPNVPPTCGNAGL----AVVSQGVPAGA 389
           PQG ++  P +PPP +   L SLA  + S    P++ P CG  GL    A  S G P G 
Sbjct: 311 PQG-SRTSPGAPPPASKPKLWSLAEIATSDLKQPSLGPGCGPPGLPAAAAPASTGAPPGG 369

Query: 390 GAH 392
             +
Sbjct: 370 SPY 372


>gi|39930475 iroquois homeobox 2 [Homo sapiens]
          Length = 471

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 7/63 (11%)

Query: 336 PQGPAQNMPVSPPPGTG--LSSLARPSGSGWLWPNVPPTCGNAGL----AVVSQGVPAGA 389
           PQG ++  P +PPP +   L SLA  + S    P++ P CG  GL    A  S G P G 
Sbjct: 311 PQG-SRTSPGAPPPASKPKLWSLAEIATSDLKQPSLGPGCGPPGLPAAAAPASTGAPPGG 369

Query: 390 GAH 392
             +
Sbjct: 370 SPY 372


>gi|239757043 PREDICTED: functional smad suppressing element 18
           [Homo sapiens]
          Length = 996

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 12/78 (15%)

Query: 314 GASPLLLVAWATDLFLRSRVCFPQGPAQNMPVSPPPGTGLSSLARPSGSGWLWPNVPPTC 373
           G SP LL     DL        P G A +   +PPPG     +A   GSG      PP  
Sbjct: 500 GESPALLRQAFLDL------AEPGGAAGSAEAAPPPGQPPQVVANGPGSG-----PPPPA 548

Query: 374 GNAGLA-VVSQGVPAGAG 390
           G AG    + +  P G+G
Sbjct: 549 GGAGSRDALFESPPGGSG 566


>gi|239751555 PREDICTED: functional smad suppressing element 18
           [Homo sapiens]
          Length = 1252

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 12/78 (15%)

Query: 314 GASPLLLVAWATDLFLRSRVCFPQGPAQNMPVSPPPGTGLSSLARPSGSGWLWPNVPPTC 373
           G SP LL     DL        P G A +   +PPPG     +A   GSG      PP  
Sbjct: 500 GESPALLRQAFLDL------AEPGGAAGSAEAAPPPGQPPQVVANGPGSG-----PPPPA 548

Query: 374 GNAGLA-VVSQGVPAGAG 390
           G AG    + +  P G+G
Sbjct: 549 GGAGSRDALFESPPGGSG 566


>gi|239746067 PREDICTED: functional smad suppressing element 18
           [Homo sapiens]
          Length = 1252

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 12/78 (15%)

Query: 314 GASPLLLVAWATDLFLRSRVCFPQGPAQNMPVSPPPGTGLSSLARPSGSGWLWPNVPPTC 373
           G SP LL     DL        P G A +   +PPPG     +A   GSG      PP  
Sbjct: 500 GESPALLRQAFLDL------AEPGGAAGSAEAAPPPGQPPQVVANGPGSG-----PPPPA 548

Query: 374 GNAGLA-VVSQGVPAGAG 390
           G AG    + +  P G+G
Sbjct: 549 GGAGSRDALFESPPGGSG 566


>gi|59806357 submaxillary gland androgen regulated protein 3 homolog
           A precursor [Homo sapiens]
          Length = 134

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 334 CFPQGPAQNMPVSPPP---GTGLSSLARPSGSGWLWPNVPPTCGNAGLAVVSQGVPAGAG 390
           CFP G     P  PPP   G     L+ P G G + P+ PP  G   +   S   P G G
Sbjct: 42  CFPFGTGFVPPPHPPPYGPGRFPPPLSPPYGPGRIPPSPPPPYGPGRIQSHSLPPPYGPG 101


>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
          Length = 1711

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 9/50 (18%)

Query: 328 FLRSRVCFP--QGPA-QNMPVSPPPGTGLSSLARPSGSGWLWPNVPPTCG 374
           F  SRVCFP  Q PA Q +P+S  PGT L+    PS      P  PP+CG
Sbjct: 415 FSLSRVCFPAAQAPAMQKVPLSFQPGTVLT----PSQPLVYIP--PPSCG 458


>gi|47059492 hypothetical protein LOC80111 [Homo sapiens]
          Length = 165

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 336 PQGPAQNMPVSPPPGTGLSSLARPSGSGWLWPNVPPT 372
           PQ  +  + + P PG  L+ L+ PSG G +    PPT
Sbjct: 15  PQAVSSGLSLVPAPGLVLTCLSAPSGPGGMALEPPPT 51


>gi|239752777 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 108

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 127 GLGPVTLGEAGRRHVHAEGDGGLEPEHGDVEVIG 160
           GL P  L  + R   H+ G G   P HG+V+V G
Sbjct: 20  GLVPAQLPRSRREQAHSRGAGPGAPAHGEVDVDG 53


>gi|239749872 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 125

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 112 APEAAHNPRLL--RHQRGLGPVTLGEAGRRHVHAEGDGGLEPEHG 154
           A + A +PR L  + +RG GP +LG AG       G G L P  G
Sbjct: 47  AEQLAGHPRRLSEKERRGAGPGSLGLAGAGQPRGPGRGRLRPGRG 91


>gi|239747289 PREDICTED: hypothetical protein XP_002346412 [Homo
           sapiens]
          Length = 108

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 127 GLGPVTLGEAGRRHVHAEGDGGLEPEHGDVEVIG 160
           GL P  L  + R   H+ G G   P HG+V+V G
Sbjct: 20  GLVPAQLPRSRREQAHSRGAGPGAPAHGEVDVDG 53


>gi|239744174 PREDICTED: hypothetical protein XP_002343068 [Homo
           sapiens]
          Length = 125

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 112 APEAAHNPRLL--RHQRGLGPVTLGEAGRRHVHAEGDGGLEPEHG 154
           A + A +PR L  + +RG GP +LG AG       G G L P  G
Sbjct: 47  AEQLAGHPRRLSEKERRGAGPGSLGLAGAGQPRGPGRGRLRPGRG 91


>gi|239741113 PREDICTED: hypothetical protein XP_002342112 [Homo
           sapiens]
          Length = 108

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 127 GLGPVTLGEAGRRHVHAEGDGGLEPEHGDVEVIG 160
           GL P  L  + R   H+ G G   P HG+V+V G
Sbjct: 20  GLVPAQLPRSRREQAHSRGAGPGAPAHGEVDVDG 53


>gi|188536047 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin c1 [Homo sapiens]
          Length = 1105

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%)

Query: 338  GPAQNMPVSPPPGTGLSSLA---RPSGSGWLWPNVPPTCGN 375
            GP   MP    PG  + ++A    PSGSG   P +PP  GN
Sbjct: 1019 GPGSMMPGQHMPGRMIPTVAANIHPSGSGPTPPGMPPMPGN 1059


>gi|115430223 galectin 3 [Homo sapiens]
          Length = 250

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 335 FPQGPAQNMPVSPPPGTG-LSSLARPSGSGWLWPNVPPTCGNAGLAVVSQGVPAGAGAHH 393
           +P  PA  +   PP G G   S  +PS +G  +P   P    AG  +V   +P   G   
Sbjct: 70  YPGAPAPGVYPGPPSGPGAYPSSGQPSATG-AYPATGPYGAPAGPLIVPYNLPLPGGVVP 128

Query: 394 RVLFLV 399
           R+L  +
Sbjct: 129 RMLITI 134


>gi|77681565 NG5 protein [Homo sapiens]
          Length = 306

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 23/71 (32%), Positives = 26/71 (36%), Gaps = 1/71 (1%)

Query: 171 HLHLVHRLTALLLLRVPVPWDRRTAATPVSFGGCIVCASRGHQRGVPGPKAFGIPDPGCA 230
           H H  H+     L R+       +AAT            R      PGP A G P PGCA
Sbjct: 44  HHHHYHQSGTATLPRLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAA-GAPPPGCA 102

Query: 231 VWPLAESDFYL 241
             P    D YL
Sbjct: 103 TLPRMPPDPYL 113


>gi|225703079 membrane bound O-acyltransferase domain containing 7
           isoform 1 [Homo sapiens]
          Length = 472

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 45/171 (26%), Positives = 59/171 (34%), Gaps = 33/171 (19%)

Query: 345 VSPPPGTGLSSLARPSGSGWLWPNVPPTCGNAGLAVVSQGVPAGAGAHHRVLFLVAELVT 404
           +SP   T L  L      G+L+    P     G A V  G+       H +  LV  L T
Sbjct: 1   MSPEEWTYLVVLLISIPIGFLFKKAGPGLKRWGAAAVGLGLTLFTCGPHTLHSLVTILGT 60

Query: 405 VPVVQAAELPCDCKGEA-RWLWGQLEKWR----LGWPKGASY------------------ 441
             ++QA   PC C   A  W +  L  +R    LG P    +                  
Sbjct: 61  WALIQAQ--PCSCHALALAWTFSYLLFFRALSLLGLPTPTPFTNAVQLLLTLKLVSLASE 118

Query: 442 ---IHLPVSHKAAIGLSKGPEPGDSCGRKPIFQGCMEAFIYE-CGLIIFAG 488
              +HL    + A G SKGP    + G  P     ME   Y  C + I  G
Sbjct: 119 VQDLHLAQRKEMASGFSKGP----TLGLLPDVPSLMETLSYSYCYVGIMTG 165


>gi|225703037 membrane bound O-acyltransferase domain containing 7
           isoform 3 [Homo sapiens]
          Length = 344

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 45/171 (26%), Positives = 59/171 (34%), Gaps = 33/171 (19%)

Query: 345 VSPPPGTGLSSLARPSGSGWLWPNVPPTCGNAGLAVVSQGVPAGAGAHHRVLFLVAELVT 404
           +SP   T L  L      G+L+    P     G A V  G+       H +  LV  L T
Sbjct: 1   MSPEEWTYLVVLLISIPIGFLFKKAGPGLKRWGAAAVGLGLTLFTCGPHTLHSLVTILGT 60

Query: 405 VPVVQAAELPCDCKGEA-RWLWGQLEKWR----LGWPKGASY------------------ 441
             ++QA   PC C   A  W +  L  +R    LG P    +                  
Sbjct: 61  WALIQAQ--PCSCHALALAWTFSYLLFFRALSLLGLPTPTPFTNAVQLLLTLKLVSLASE 118

Query: 442 ---IHLPVSHKAAIGLSKGPEPGDSCGRKPIFQGCMEAFIYE-CGLIIFAG 488
              +HL    + A G SKGP    + G  P     ME   Y  C + I  G
Sbjct: 119 VQDLHLAQRKEMASGFSKGP----TLGLLPDVPSLMETLSYSYCYVGIMTG 165


>gi|239758167 PREDICTED: hypothetical protein XP_002346321 [Homo
           sapiens]
          Length = 271

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 37/139 (26%), Positives = 54/139 (38%), Gaps = 19/139 (13%)

Query: 336 PQGPAQNMPVSPPPGTGLSSLARPSGSGWLWPNVPPTCGNAGLAVVSQGVPAGAGAHHRV 395
           P+G A+   +       ++ LA P GSG       P+   +   V S GVP   G   R 
Sbjct: 29  PRGRAEEDKLGSAAAWKVAELALPGGSGSRGEGPTPSLKPSAQCVRSPGVPRSLGGLCR- 87

Query: 396 LFLVAELVTVPVVQAAELPCD-CKGE---ARWLWGQLEKWRLG-WPKGASYIHLPVSHKA 450
               A    +P V  A  PC  C+G    +R    +  + R G WP   S        + 
Sbjct: 88  ----APDPALP-VSVAVPPCPACRGPQSISRSRPRRAVRPRPGPWPAAPS--------RG 134

Query: 451 AIGLSKGPEPGDSCGRKPI 469
            +   +GP PG + G  P+
Sbjct: 135 PVRSCRGPRPGRALGSLPL 153


>gi|169164558 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 181

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 347 PPPGTGLSSLARPSGSGWLWPNVPPTCGNAGLAV 380
           PPPG+G  +  R + + W W +     G+  ++V
Sbjct: 96  PPPGSGCGANLRAAAASWCWGDAEKPPGSVAMSV 129


>gi|239750077 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 903

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 7/39 (17%)

Query: 181 LLLLRVPVPWDRRTAATPVSFGGCIVCASRGHQRGVPGP 219
           LL LRV     R+  A P    GC+  A  GHQR VP P
Sbjct: 86  LLALRVSA---RQVPAAP----GCVTVAGTGHQRPVPQP 117


>gi|239748011 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 181

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 347 PPPGTGLSSLARPSGSGWLWPNVPPTCGNAGLAV 380
           PPPG+G  +  R + + W W +     G+  ++V
Sbjct: 96  PPPGSGCGANLRAAAASWCWGDAEKPPGSVAMSV 129


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.141    0.464 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,515,736
Number of Sequences: 37866
Number of extensions: 1363969
Number of successful extensions: 3790
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 3750
Number of HSP's gapped (non-prelim): 54
length of query: 510
length of database: 18,247,518
effective HSP length: 107
effective length of query: 403
effective length of database: 14,195,856
effective search space: 5720929968
effective search space used: 5720929968
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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